Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001144

Physical Location & Seq

Genomic Coordinates Reverse (-)

48139202 .. 48140916

Gene Structure 1715 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG422700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGGATCCGAACCGCTTCCCGATGCTCTCCTACGTCCTGGACCGGCTTCCCTCCTTGGGATCCAAGCCAACCACCCCCCCCGTCGTCTCCGACCTCATGTCCATCCACATCGGCGATCCAGCCGCTGCTCAAAGCGAGATCGCTGACCGGATGCCCCACCTCTCCGACCCGAAGGTCATCGCCGCGATGAGACGCGCCGTGGCCGACGTGGCTCAGGCCCGATCCGTCCTCACCGCGCTCGGCGACCGACCCGATCACGAGACCGTTGACTCCGCCAAGGCCAAGCTCGCCGCCATCGATGCCGGCCGTGCTGACGCGGCGGAGACGGAGCAGCGTGAATCGGCGGGGACAGAAGAGCAAGAGTGCATGGCGATCCTCCAGCTGGAGGAGTTGCACGTCGCCTACGAGAAGCTTCTCAAGGACGCCGAGGAGAGGCTCGTCAAGATTTACCGGTCGGCGGAGGCCGGAGTGGTGGAGGAGGAGGAGGAGAAGGTGGATGGCGTCAGCGACCAAGTCGATGAGGAGGTCGTCCGGATTCTGCAGCAGGCTTCGTCCGGGACTGGGCCGGACCGGGTCGACCTCTCGGATCGAGGCTTGCGTTTCTTGCCCGAGGAGTTTGGCCGGATCAGTGGATTGCTTCAGCTTGATCTTTCCAACAACGAGCTGCAGGCCATTCCTGATACAATAGCCGGATTAGAGAAGCTAGAAATGCTGAATTTGTCTACCAATCTCTTGGAGTCACTGCCCGAGACGATTGGGCTGCTGCAAAATTTGAAGCTCCTCACTGTCTCCGGCAACAAGCTAACTGCCCTTCCTGACTCTATCTGCCACTGCAGGTCATTGGTGGAGTTGGATGTGAGTTTCAACCAGCTCACGTACTTGCCAACCAACATTGGTTATGAGTTGGTTAATCTGCAGAAGCTTTCGGTGCAATTGAACAAAATCCGTACCTTTCCTACCTCTATTTGTGAGTTGAGGTCTTTGCTGTCTTTGGATGCTCACTTCAATGAGCTACGTGGTCTTCCACTAGCTTTTGGCCGATTGACTAGTCTTCAAAGTCTCAGCCTTGCCAGTAATTTTACTGATCTCACTGAGCTCCCGGATACTTTTGGTGATCTAACCAATCTCAAGGAACTTGATCTCAGCAACAATCAGGTTCATGCTCTTCCAGATACATTTGGCCGCCTTGAAAATCTGGTTAAACTTAACCTGGATGGAAACCCTCTTGTGGTTCCGCCTCCTGATGTAGCTCAACAAGGTGTTAAAGCCATCAAGGTCTTTATGAGCAATAGGTGGTTAGAGATACTGGCGGAAGAAGAAAAGAAGAGCATGCTTCAAGTACAAGAACAAGAAGAAGCAGGATGGTTGACACGCAGCACTTCTTGGGTGAAGGGTTACGTTTCAGGTGTTTCTGAATATCTATCCCCAAAAGCTCCCGAAGACCCTATTCTTAATCAGCAGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005912 GO:0006810 GO:0007043 GO:0007154 GO:0007163 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016323 GO:0022607 GO:0023052 GO:0030011 GO:0030029 GO:0030054 GO:0032501 GO:0032502 GO:0033036 GO:0033043 GO:0034329 GO:0034330 GO:0035088 GO:0035090 GO:0035239 GO:0035295 GO:0042886 GO:0044085 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045108 GO:0045184 GO:0045197 GO:0045199 GO:0045216 GO:0048229 GO:0048513 GO:0048546 GO:0048557 GO:0048562 GO:0048565 GO:0048566 GO:0048568 GO:0048598 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051234 GO:0051493 GO:0051716 GO:0055046 GO:0055123 GO:0061245 GO:0065007 GO:0070161 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0098590

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8

Protein Analysis

488

Amino Acids

53.73

Weight (kDa)

4.63

Isoelectric Point (pI)

49.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	193 - 245	1.4e-08	Leucine rich repeat
LRR_14	PF23598	235 - 287	7.8e-06	Leucine-rich repeat region
LRR_8	PF13855	279 - 338	3e-06	Leucine rich repeat
LRR_14	PF23598	290 - 358	2.7e-08	Leucine-rich repeat region
LRR_8	PF13855	350 - 409	1.9e-10	Leucine rich repeat
LRR_14	PF23598	361 - 406	2.9e-06	Leucine-rich repeat region
LRR_4	PF12799	374 - 408	1.7e-06	Leucine Rich repeats (2 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11330 AT5G05850
fragaria_vesca	FvH4_2g00400 FvH4_5g35210 FvH4_5g35210 FvH4_5g35210
malus_domestica	MD05G1037800.v1.1 MD10G1041600.v1.1
prunus_persica	Prupe.8G003900_v2.0.a1
pyrus_communis	pycom05g02800 pycom10g02870
rosa_chinensis	RchiOBHm_Chr6g0249641 RchiOBHm_Chr7g0236341
rosa_laevigata	RLG00000001082 RLG00000015555 RLG00000018499 RLG00000018876 RLG00000019048
rosa_multiflora	Rmu_co8191622.1_g000001 Rmu_co8329307.1_g000001 Rmu_sc0000704.1_g000050
rosa_roxburghii	Rroxscaffold_1G00019180 Rroxscaffold_3G00225210
rosa_rugosa	Rorug03G0338400 Rorug04G0195800 Rorug05G0494200 Rorug07G0296200 Rorug07G0296300 Rorug07G0296400 Rorug07G0296500 Rorug07G0296500 Rorug07G0296500 Rorug07G0296600 Rorug07G0296700 Rorug07G0296700
rosa_samantha	Rh1AG198700 Rh2AG167200 Rh2AG422000 Rh2BG174100 Rh2DG172600 Rh2DG587800 Rh3AG279400 Rh4AG190400 Rh5BG446700 Rh5DG459100 Rh6AG004200 Rh6AG382900 Rh6BG005900 Rh6CG003200 Rh6CG396200 Rh6DG003000 Rh7AG451000 Rh7BG422700 Rh7CG470600 Rh7DG440400
rosa_wichuraiana	Rw0G019890 Rw6G000460 Rw7G037490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	173
Acc36I	ACCTGC	1 cut(s)	825
AccI	GTMKAC	2 cut(s)	576, 722
AccII	CGCG	4 cut(s)	185, 195, 236, 317
AccIII	TCCGGA	1 cut(s)	531
AclWI	GGATC	8 cut(s)	12, 54, 67, 110, 216, 367, 594, 632
AcoI	YGGCCR	5 cut(s)	201, 304, 619, 1036, 1180
AcsI	RAATTY	2 cut(s)	715, 769
AcuI	CTGAAG	1 cut(s)	623
AcyI	GRCGYC	2 cut(s)	423, 501
AfaI	GTAC	3 cut(s)	878, 949, 1341
AfiI	CCNNNNNNNGG	7 cut(s)	56, 382, 385, 432, 457, 561, 1228
AgeI	ACCGGT	1 cut(s)	450
AgsI	TTSAA	7 cut(s)	775, 865, 937, 1006, 1055, 1190, 1337
AhdI	GACNNNNNGTC	1 cut(s)	97
AhlI	ACTAGT	1 cut(s)	1046
AjiI	CACGTC	2 cut(s)	208, 397
AjnI	CCWGG	2 cut(s)	36, 1209
Alw21I	GWGCWC	1 cut(s)	1098
Alw26I	GTCTC	7 cut(s)	91, 184, 254, 317, 743, 793, 1064
AlwI	GGATC	8 cut(s)	12, 54, 67, 110, 216, 367, 594, 632
AlwNI	CAGNNNCTG	1 cut(s)	125
Ama87I	CYCGRG	2 cut(s)	608, 746
Aor13HI	TCCGGA	1 cut(s)	531
ApeKI	GCWGC	8 cut(s)	125, 331, 541, 664, 760, 763, 1374, 1459
ApoI	RAATTY	2 cut(s)	715, 769
AsiGI	ACCGGT	1 cut(s)	450
Asp700I	GAANNNNTTC	1 cut(s)	14
AspLEI	GCGC	2 cut(s)	197, 238
AspS9I	GGNCC	4 cut(s)	40, 217, 563, 568
AsuC2I	CCSGG	3 cut(s)	556, 572, 1100
AsuHPI	GGTGA	3 cut(s)	223, 1124, 1399
AvaI	CYCGRG	2 cut(s)	608, 746
AvaII	GGWCC	2 cut(s)	40, 568
BamHI	GGATCC	2 cut(s)	4, 59
BanII	GRGCYC	1 cut(s)	1098
BauI	CACGAG	1 cut(s)	257
BbsI	GAAGAC	3 cut(s)	1013, 1043, 1446
Bbv12I	GWGCWC	1 cut(s)	1098
BbvI	GCAGC	7 cut(s)	112, 343, 553, 651, 747, 750, 1386
BccI	CCATC	6 cut(s)	110, 302, 491, 1208, 1277, 1356
BceAI	ACGGC	2 cut(s)	182, 291
BcgI	CGANNNNNNTGC	2 cut(s)	742, 776
BciT130I	CCWGG	2 cut(s)	38, 1211
BciVI	GTATCC	1 cut(s)	1096
BcnI	CCSGG	3 cut(s)	556, 572, 1100
BcoDI	GTCTC	7 cut(s)	91, 184, 254, 317, 743, 793, 1064
BcuI	ACTAGT	1 cut(s)	1046
BfaI	CTAG	3 cut(s)	704, 1028, 1047
BfmI	CTRYAG	4 cut(s)	539, 665, 832, 914
BfuAI	ACCTGC	1 cut(s)	825
BfuI	GTATCC	1 cut(s)	1096
BglI	GCCNNNNNGGC	1 cut(s)	209
Bme1390I	CCNGG	5 cut(s)	38, 556, 572, 1100, 1211
Bme18I	GGWCC	2 cut(s)	40, 568
BmeRI	GACNNNNNGTC	1 cut(s)	97
BmeT110I	CYCGRG	2 cut(s)	608, 746
BmgBI	CACGTC	2 cut(s)	208, 397
BmgT120I	GGNCC	4 cut(s)	40, 217, 563, 568
BmiI	GGNNCC	3 cut(s)	6, 61, 1233
BmrFI	CCNGG	5 cut(s)	38, 556, 572, 1100, 1211
BmrI	ACTGGG	1 cut(s)	570
BmsI	GCATC	4 cut(s)	12, 141, 289, 985
BmuI	ACTGGG	1 cut(s)	570
BpiI	GAAGAC	3 cut(s)	1013, 1043, 1446
BpmI	CTGGAG	2 cut(s)	362, 404
Bpu10I	CCTNAGC	1 cut(s)	213
BpuEI	CTTGAG	2 cut(s)	401, 1112
BpuMI	CCSGG	3 cut(s)	556, 572, 1100
Bsa29I	ATCGAT	1 cut(s)	297
BsaAI	YACGTR	2 cut(s)	876, 1016
BsaHI	GRCGYC	2 cut(s)	423, 501
BsaI	GGTCTC	1 cut(s)	254
BsaJI	CCNNGG	5 cut(s)	54, 198, 276, 426, 609
BsaWI	WCCGGW	3 cut(s)	147, 450, 531
Bsc4I	CCNNNNNNNGG	7 cut(s)	56, 382, 385, 432, 457, 561, 1228
Bse118I	RCCGGY	3 cut(s)	42, 302, 450
Bse1I	ACTGG	3 cut(s)	565, 1071, 1311
BseAI	TCCGGA	1 cut(s)	531
BseBI	CCWGG	2 cut(s)	38, 1211
BseCI	ATCGAT	1 cut(s)	297
BseDI	CCNNGG	5 cut(s)	54, 198, 276, 426, 609
BseGI	GGATG	7 cut(s)	102, 156, 502, 859, 1000, 1219, 1367
BseLI	CCNNNNNNNGG	7 cut(s)	56, 382, 385, 432, 457, 561, 1228
BseMII	CTCAG	4 cut(s)	227, 1075, 1083, 1156
BseNI	ACTGG	3 cut(s)	565, 1071, 1311
BseRI	GAGGAG	9 cut(s)	401, 443, 491, 494, 497, 500, 536, 626, 770
BseX3I	CGGCCG	1 cut(s)	304
BseXI	GCAGC	7 cut(s)	112, 343, 553, 651, 747, 750, 1386
Bsh1236I	CGCG	4 cut(s)	185, 195, 236, 317
Bsh1285I	CGRYCG	3 cut(s)	247, 307, 455
BshTI	ACCGGT	1 cut(s)	450
BshVI	ATCGAT	1 cut(s)	297
BsiEI	CGRYCG	3 cut(s)	247, 307, 455
BsiHKAI	GWGCWC	1 cut(s)	1098
BsiHKCI	CYCGRG	2 cut(s)	608, 746
BslFI	GGGAC	2 cut(s)	361, 571
BslI	CCNNNNNNNGG	7 cut(s)	56, 382, 385, 432, 457, 561, 1228
BsmAI	GTCTC	7 cut(s)	91, 184, 254, 317, 743, 793, 1064
BsmBI	CGTCTC	4 cut(s)	91, 184, 317, 743
BsmFI	GGGAC	2 cut(s)	361, 571
Bso31I	GGTCTC	1 cut(s)	254
BsoBI	CYCGRG	2 cut(s)	608, 746
Bsp1286I	GDGCHC	1 cut(s)	1098
Bsp13I	TCCGGA	1 cut(s)	531
BspCNI	CTCAG	4 cut(s)	226, 1074, 1084, 1155
BspDI	ATCGAT	1 cut(s)	297
BspEI	TCCGGA	1 cut(s)	531
BspFNI	CGCG	4 cut(s)	185, 195, 236, 317
BspLI	GGNNCC	3 cut(s)	6, 61, 1233
BspMAI	CTGCAG	4 cut(s)	543, 669, 836, 918
BspMI	ACCTGC	1 cut(s)	825
BspPI	GGATC	8 cut(s)	12, 54, 67, 110, 216, 367, 594, 632
BspQI	GCTCTTC	3 cut(s)	348, 1170, 1319
BspTNI	GGTCTC	1 cut(s)	254
BsrFI	RCCGGY	3 cut(s)	42, 302, 450
BsrI	ACTGG	3 cut(s)	565, 1071, 1311
BssAI	RCCGGY	3 cut(s)	42, 302, 450
BssECI	CCNNGG	5 cut(s)	54, 198, 276, 426, 609
BssNI	GRCGYC	2 cut(s)	423, 501
BssSI	CACGAG	1 cut(s)	257
BssT1I	CCWWGG	2 cut(s)	54, 276
Bst2BI	CACGAG	1 cut(s)	257
Bst2UI	CCWGG	2 cut(s)	38, 1211
Bst4CI	ACNGT	2 cut(s)	265, 787
Bst6I	CTCTTC	3 cut(s)	348, 1170, 1319
BstACI	GRCGYC	2 cut(s)	423, 501
BstBAI	YACGTR	2 cut(s)	876, 1016
BstC8I	GCNNGC	6 cut(s)	288, 304, 546, 596, 669, 1331
BstDEI	CTNAG	4 cut(s)	213, 1061, 1092, 1142
BstDSI	CCRYGG	1 cut(s)	198
BstF5I	GGATG	7 cut(s)	102, 156, 502, 859, 1000, 1219, 1367
BstFNI	CGCG	4 cut(s)	185, 195, 236, 317
BstHHI	GCGC	2 cut(s)	197, 238
BstMAI	GTCTC	7 cut(s)	91, 184, 254, 317, 743, 793, 1064
BstMCI	CGRYCG	3 cut(s)	247, 307, 455
BstMWI	GCNNNNNNNGC	8 cut(s)	209, 287, 299, 308, 317, 604, 709, 928
BstNI	CCWGG	2 cut(s)	38, 1211
BstNSI	RCATGY	1 cut(s)	1333
BstSCI	CCNGG	5 cut(s)	36, 554, 570, 1098, 1209
BstSFI	CTRYAG	4 cut(s)	539, 665, 832, 914
BstUI	CGCG	4 cut(s)	185, 195, 236, 317
BstV1I	GCAGC	7 cut(s)	112, 343, 553, 651, 747, 750, 1386
BstV2I	GAAGAC	3 cut(s)	1013, 1043, 1446
BstX2I	RGATCY	2 cut(s)	4, 59
BstXI	CCANNNNNNTGG	1 cut(s)	733
BstYI	RGATCY	2 cut(s)	4, 59
BstZI	CGGCCG	1 cut(s)	304
Bsu15I	ATCGAT	1 cut(s)	297
BsuI	GTATCC	1 cut(s)	1096
BsuTUI	ATCGAT	1 cut(s)	297
BtgI	CCRYGG	1 cut(s)	198
BtgZI	GCGATG	2 cut(s)	163, 200
BtrI	CACGTC	2 cut(s)	208, 397
BtsCI	GGATG	7 cut(s)	102, 156, 502, 859, 1000, 1219, 1367
BtsI	GCAGTG	2 cut(s)	740, 829
BtsIMutI	CAGTG	5 cut(s)	634, 740, 783, 829, 1089
BveI	ACCTGC	1 cut(s)	825
Cac8I	GCNNGC	6 cut(s)	288, 304, 546, 596, 669, 1331
CaiI	CAGNNNCTG	1 cut(s)	125
CfoI	GCGC	2 cut(s)	197, 238
Cfr10I	RCCGGY	3 cut(s)	42, 302, 450
Cfr13I	GGNCC	4 cut(s)	40, 217, 563, 568
ClaI	ATCGAT	1 cut(s)	297
CpoI	CGGWCCG	1 cut(s)	568
CseI	GACGC	4 cut(s)	201, 323, 431, 490
Csp6I	GTAC	3 cut(s)	877, 948, 1340
CspAI	ACCGGT	1 cut(s)	450
CspI	CGGWCCG	1 cut(s)	568
CviAII	CATG	4 cut(s)	97, 367, 1160, 1330
CviQI	GTAC	3 cut(s)	877, 948, 1340
DdeI	CTNAG	4 cut(s)	213, 1061, 1092, 1142
DrdI	GACNNNNNNGTC	1 cut(s)	173
DriI	GACNNNNNGTC	1 cut(s)	97
DseDI	GACNNNNNNGTC	1 cut(s)	173
EaeI	YGGCCR	5 cut(s)	201, 304, 619, 1036, 1180
EagI	CGGCCG	1 cut(s)	304
Eam1104I	CTCTTC	3 cut(s)	348, 1170, 1319
Eam1105I	GACNNNNNGTC	1 cut(s)	97
EarI	CTCTTC	3 cut(s)	348, 1170, 1319
EciI	GGCGGA	5 cut(s)	262, 335, 473, 1224, 1325
Ecl136II	GAGCTC	1 cut(s)	1096
EclXI	CGGCCG	1 cut(s)	304
Eco130I	CCWWGG	2 cut(s)	54, 276
Eco24I	GRGCYC	1 cut(s)	1098
Eco31I	GGTCTC	1 cut(s)	254
Eco47I	GGWCC	2 cut(s)	40, 568
Eco52I	CGGCCG	1 cut(s)	304
Eco53kI	GAGCTC	1 cut(s)	1096
Eco57I	CTGAAG	1 cut(s)	623
Eco88I	CYCGRG	2 cut(s)	608, 746
EcoICRI	GAGCTC	1 cut(s)	1096
EcoRII	CCWGG	2 cut(s)	36, 1209
EcoT14I	CCWWGG	2 cut(s)	54, 276
EcoT38I	GRGCYC	1 cut(s)	1098
ErhI	CCWWGG	2 cut(s)	54, 276
Esp3I	CGTCTC	4 cut(s)	91, 184, 317, 743
FaeI	CATG	4 cut(s)	100, 370, 1163, 1333
FaiI	YATR	7 cut(s)	98, 368, 900, 1161, 1283, 1331, 1465
FaqI	GGGAC	2 cut(s)	361, 571
FatI	CATG	4 cut(s)	96, 366, 1159, 1329
FauI	CCCGC	1 cut(s)	337
FblI	GTMKAC	2 cut(s)	576, 722
FokI	GGATG	7 cut(s)	89, 163, 509, 866, 1007, 1226, 1374
FriOI	GRGCYC	1 cut(s)	1098
FspBI	CTAG	3 cut(s)	704, 1028, 1047
GlaI	GCGC	2 cut(s)	196, 237
GsuI	CTGGAG	2 cut(s)	362, 404
HgaI	GACGC	4 cut(s)	201, 323, 431, 490
HhaI	GCGC	2 cut(s)	197, 238
Hin1I	GRCGYC	2 cut(s)	423, 501
Hin1II	CATG	4 cut(s)	100, 370, 1163, 1333
Hin6I	GCGC	2 cut(s)	195, 236
HinP1I	GCGC	2 cut(s)	195, 236
HincII	GTYRAC	3 cut(s)	268, 577, 1368
HindII	GTYRAC	3 cut(s)	268, 577, 1368
HindIII	AAGCTT	2 cut(s)	410, 920
HinfI	GANTC	5 cut(s)	269, 338, 535, 737, 818
HphI	GGTGA	3 cut(s)	223, 1124, 1399
Hpy166II	GTNNAC	4 cut(s)	268, 577, 723, 1368
Hpy188I	TCNGA	5 cut(s)	9, 91, 166, 586, 1414
Hpy188III	TCNNGA	9 cut(s)	19, 257, 442, 532, 677, 815, 1169, 1241, 1436
Hpy8I	GTNNAC	4 cut(s)	268, 577, 723, 1368
Hpy99I	CGWCG	3 cut(s)	86, 209, 401
HpyAV	CCTTC	4 cut(s)	166, 484, 821, 1384
HpyCH4III	ACNGT	2 cut(s)	265, 787
HpyCH4IV	ACGT	6 cut(s)	33, 207, 396, 875, 1015, 1398
HpyCH4V	TGCA	8 cut(s)	366, 394, 541, 667, 766, 834, 916, 931
HpyF10VI	GCNNNNNNNGC	8 cut(s)	209, 287, 299, 308, 317, 604, 709, 928
HpyF3I	CTNAG	4 cut(s)	213, 1061, 1092, 1142
HpySE526I	ACGT	6 cut(s)	33, 207, 396, 875, 1015, 1398
Hsp92I	GRCGYC	2 cut(s)	423, 501
Hsp92II	CATG	4 cut(s)	100, 370, 1163, 1333
HspAI	GCGC	2 cut(s)	195, 236
Kpn2I	TCCGGA	1 cut(s)	531
KroI	GCCGGC	1 cut(s)	302
KroNI	GCCGGC	1 cut(s)	304
LguI	GCTCTTC	3 cut(s)	348, 1170, 1319
LmnI	GCTCC	4 cut(s)	328, 783, 1101, 1438
Lsp1109I	GCAGC	7 cut(s)	112, 343, 553, 651, 747, 750, 1386
LweI	GCATC	4 cut(s)	12, 141, 289, 985
MaeI	CTAG	3 cut(s)	704, 1028, 1047
MaeII	ACGT	6 cut(s)	33, 207, 396, 875, 1015, 1398
MaeIII	GTNAC	2 cut(s)	738, 1394
MboII	GAAGA	9 cut(s)	365, 1013, 1043, 1157, 1325, 1328, 1336, 1364, 1451
MfeI	CAATTG	1 cut(s)	932
MflI	RGATCY	2 cut(s)	4, 59
MhlI	GDGCHC	1 cut(s)	1098
MluCI	AATT	4 cut(s)	715, 769, 932, 1075
MlyI	GAGTC	3 cut(s)	263, 746, 812
MmeI	TCCRAC	4 cut(s)	114, 189, 678, 831
MroI	TCCGGA	1 cut(s)	531
MroNI	GCCGGC	1 cut(s)	302
MroXI	GAANNNNTTC	1 cut(s)	14
MseI	TTAA	5 cut(s)	909, 1200, 1206, 1263, 1452
MslI	CAYNNNNRTG	1 cut(s)	1005
MspA1I	CMGCKG	2 cut(s)	125, 382
MspR9I	CCNGG	5 cut(s)	38, 556, 572, 1100, 1211
MunI	CAATTG	1 cut(s)	932
MvaI	CCWGG	2 cut(s)	38, 1211
MvnI	CGCG	4 cut(s)	185, 195, 236, 317
MwoI	GCNNNNNNNGC	8 cut(s)	209, 287, 299, 308, 317, 604, 709, 928
NaeI	GCCGGC	1 cut(s)	304
NciI	CCSGG	3 cut(s)	556, 572, 1100
NgoMIV	GCCGGC	1 cut(s)	302
NlaIII	CATG	4 cut(s)	100, 370, 1163, 1333
NlaIV	GGNNCC	3 cut(s)	6, 61, 1233
NmeAIII	GCCGAG	2 cut(s)	219, 451
NmuCI	GTSAC	1 cut(s)	738
NspI	RCATGY	1 cut(s)	1333
PaeI	GCATGC	1 cut(s)	1333
PciSI	GCTCTTC	3 cut(s)	348, 1170, 1319
PcsI	WCGNNNNNNNCGW	3 cut(s)	294, 402, 595
PdiI	GCCGGC	1 cut(s)	304
PdmI	GAANNNNTTC	1 cut(s)	14
PfeI	GAWTC	2 cut(s)	338, 535
PflFI	GACNNNGTC	2 cut(s)	512, 572
PfoI	TCCNGGA	3 cut(s)	36, 554, 1098
PinAI	ACCGGT	1 cut(s)	450
PleI	GAGTC	3 cut(s)	263, 745, 812
PpsI	GAGTC	3 cut(s)	263, 745, 812
Ppu21I	YACGTR	2 cut(s)	876, 1016
Psp124BI	GAGCTC	1 cut(s)	1098
Psp6I	CCWGG	2 cut(s)	36, 1209
PspGI	CCWGG	2 cut(s)	36, 1209
PspN4I	GGNNCC	3 cut(s)	6, 61, 1233
PspPI	GGNCC	4 cut(s)	40, 217, 563, 568
PstI	CTGCAG	4 cut(s)	543, 669, 836, 918
PstNI	CAGNNNCTG	1 cut(s)	125
PsuI	RGATCY	2 cut(s)	4, 59
PsyI	GACNNNGTC	2 cut(s)	512, 572
PvuII	CAGCTG	1 cut(s)	382
RsaI	GTAC	3 cut(s)	878, 949, 1341
RsaNI	GTAC	3 cut(s)	877, 948, 1340
RseI	CAYNNNNRTG	1 cut(s)	1005
Rsr2I	CGGWCCG	1 cut(s)	568
RsrII	CGGWCCG	1 cut(s)	568
SacI	GAGCTC	1 cut(s)	1098
SalI	GTCGAC	1 cut(s)	575
SapI	GCTCTTC	3 cut(s)	348, 1170, 1319
SaqAI	TTAA	5 cut(s)	909, 1200, 1206, 1263, 1452
Sau96I	GGNCC	4 cut(s)	40, 217, 563, 568
SchI	GAGTC	3 cut(s)	263, 746, 812
ScrFI	CCNGG	5 cut(s)	38, 556, 572, 1100, 1211
SduI	GDGCHC	1 cut(s)	1098
SfaNI	GCATC	4 cut(s)	12, 141, 289, 985
SfcI	CTRYAG	4 cut(s)	539, 665, 832, 914
SinI	GGWCC	2 cut(s)	40, 568
SmiMI	CAYNNNNRTG	1 cut(s)	1005
SmlI	CTYRAG	2 cut(s)	416, 1127
SmoI	CTYRAG	2 cut(s)	416, 1127
SpeI	ACTAGT	1 cut(s)	1046
SphI	GCATGC	1 cut(s)	1333
Sse9I	AATT	4 cut(s)	715, 769, 932, 1075
SspMI	CTAG	3 cut(s)	704, 1028, 1047
SstI	GAGCTC	1 cut(s)	1098
StyD4I	CCNGG	5 cut(s)	36, 554, 570, 1098, 1209
StyI	CCWWGG	2 cut(s)	54, 276
TaaI	ACNGT	2 cut(s)	265, 787
TaiI	ACGT	6 cut(s)	36, 210, 399, 878, 1018, 1401
TaqI	TCGA	4 cut(s)	297, 516, 576, 589
TaqII	GACCGA	1 cut(s)	261
TasI	AATT	4 cut(s)	715, 769, 932, 1075
TatI	WGTACW	1 cut(s)	1339
TauI	GCSGC	5 cut(s)	125, 185, 293, 320, 1185
TfiI	GAWTC	2 cut(s)	338, 535
Tru1I	TTAA	5 cut(s)	909, 1200, 1206, 1263, 1452
Tru9I	TTAA	5 cut(s)	909, 1200, 1206, 1263, 1452
TscAI	CASTG	5 cut(s)	634, 747, 790, 836, 1096
TseFI	GTSAC	1 cut(s)	738
TseI	GCWGC	8 cut(s)	125, 331, 541, 664, 760, 763, 1374, 1459
Tsp45I	GTSAC	1 cut(s)	738
TspDTI	ATGAA	1 cut(s)	1148
TspGWI	ACGGA	3 cut(s)	214, 341, 935
TspRI	CASTG	5 cut(s)	634, 747, 790, 836, 1096
Tth111I	GACNNNGTC	2 cut(s)	512, 572
VpaK11BI	GGWCC	2 cut(s)	40, 568
XapI	RAATTY	2 cut(s)	715, 769
XceI	RCATGY	1 cut(s)	1333
XmiI	GTMKAC	2 cut(s)	576, 722
XmnI	GAANNNNTTC	1 cut(s)	14
XspI	CTAG	3 cut(s)	704, 1028, 1047

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.