Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0001144

Physical Location & Seq

Genomic Coordinates Reverse (-)

5402096 .. 5404422

Gene Structure 2327 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1041600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGATCCCAACCCCTCCAAATTCCCCATGCTCTCATACGTCTTGTCCCGCCTCCCCTCCTTGGGTCCCGGGCCTTCAAAACCCACCCCCGCCGCTCCTCCTGACCTCTGCGAAATCCGCATCGACGGCCAGCCGTCCGACCAGCCCCCCATCCTTAACCAGATGCCCCACCTCTCCGACCCCAAAGTCCTCGCCGCCATGCAACGCGCCGTCTCCGACGTCTCCCAGACCCGTTCCGTCCTCAAAATCCTCGGCGACCGACCCGACCACGAGCTCGTCGACACCGCCAAGGCCAGGCTCGCCGAAATCGACTCCGTTTTGGCCAAGAAACTAGAGGAGCTCGTGCTCTCCCCCCGCCCTCCCGACTTTGACAGGCTCCAGTGGCGGGTTCACCTGGCCGACAAAGAGGCTCAGTTGCGCGAGCAGGCGGACAAGGACAAGCAAGGTTACAAGGCTATTGTGCAGCTCGATGAGTTGCACTCCGCTTACGACAAGCTTCTCAAGGACGCCGAGCAGAGGCTAGTCAAGATTTACGAGTCGGCCATGGCCGGGGTCGTGGAAATTGAGGAGGAGGAGCAGGGCGGCGATGAGGGTTTGACCAACGGCCAAGTCCCCGAGGAGGTGGCTGGGATTCTGCAGGAGGCCTCCGGGACCACTCTGGATCGGGTCAACCTCTCGGGTCGGCAGTTACAGTTCTTGCCCGAGGCCTTCGGCTCCATTCTCGGTTTGCTCCTGCTGGATCTTTCCAGAAATGAACTCAAGGTTCTTCCTGAGTCAATAGGTGGGTTAGAGAAACTGGAAGAGATAAACGTGTCTTCAAATTTCTTGGAGTCATTGCCGGAATCAATTGGGAGGTTGCAAAATTTGAAGGTTCTGATTGCTACTGGGAACAAGCTAAGTGCCCTTCCCGACTCTATCTGTCAATGCAGGTCATTGGTGGAGTTGGACGTGAGCTTCAACGGCCTCACGTTCCTGCCAACCAACATTGGTTATGAGTTGGCCAATCTACAGAAGCTTTCTATCCAGTTAAACAAGATTCGGTCCCTTCCTACCTCTGTTTGTGAGCTGAGGTCTTTGCGCTACTTGGATGCTCACTTCAATGAGCTCCGCGGCCTTCCTCTAGACTTTGGTCGGTTGACCAATCTCGAAATCCTCAATCTCGCCAGTAATTTTACCGATCTAACTGAGCTCCCCGAGACCTTTGGTGATTTAACCAACCTCAAGGAACTCGATATCAGCAACAATCAGATTCATGCTCTTCCAGACACCTTTGGCCGCCTTGAGAATTTGACTAAACTTAATGTGGACGGGAACCCTCTTGTGATTCCACCCCCGGACGTAGTTCAACAGGGTGTGGAAGCTATCAAGATGTTCATGGGCAAGAGATGGTTGGAGATACTGGTGGAAGAAGAAAGGAAAAGCATGCTTCAGGTTCAAGAACAAGAAGGAGCAGGATGGTTGACACGCAGCACTTCCTGGTTGAAGGATTATGTGGCGGGTGTTTCCGAGTATCTGGGATCTCCAAGATCTCCAAGAACTCCTAGAGATCCTGTTCTTGACCAACAGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005912 GO:0006810 GO:0007043 GO:0007154 GO:0007163 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016323 GO:0022607 GO:0023052 GO:0030011 GO:0030029 GO:0030054 GO:0032501 GO:0032502 GO:0033036 GO:0033043 GO:0034329 GO:0034330 GO:0035088 GO:0035090 GO:0035239 GO:0035295 GO:0042886 GO:0044085 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045108 GO:0045184 GO:0045197 GO:0045199 GO:0045216 GO:0048229 GO:0048513 GO:0048546 GO:0048557 GO:0048562 GO:0048565 GO:0048566 GO:0048568 GO:0048598 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051234 GO:0051493 GO:0051716 GO:0055046 GO:0055123 GO:0061245 GO:0065007 GO:0070161 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0098590

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8

Protein Analysis

524

Amino Acids

58.07

Weight (kDa)

4.81

Isoelectric Point (pI)

48.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	219 - 274	9.3e-07	Leucine rich repeat
LRR_8	PF13855	265 - 322	1.5e-06	Leucine rich repeat
LRR_8	PF13855	310 - 369	7.3e-09	Leucine rich repeat
LRR_14	PF23598	323 - 389	5.4e-08	Leucine-rich repeat region
LRR_4	PF12799	358 - 398	8e-06	Leucine Rich repeats (2 copies)
LRR_8	PF13855	380 - 440	1.1e-10	Leucine rich repeat
LRR_14	PF23598	392 - 438	5.7e-07	Leucine-rich repeat region
LRR_4	PF12799	405 - 439	1.9e-06	Leucine Rich repeats (2 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11330 AT5G05850
fragaria_vesca	FvH4_2g00400 FvH4_5g35210 FvH4_5g35210 FvH4_5g35210
malus_domestica	MD05G1037800.v1.1 MD10G1041600.v1.1
prunus_persica	Prupe.8G003900_v2.0.a1
pyrus_communis	pycom05g02800 pycom10g02870
rosa_chinensis	RchiOBHm_Chr6g0249641 RchiOBHm_Chr7g0236341
rosa_laevigata	RLG00000001082 RLG00000015555 RLG00000018499 RLG00000018876 RLG00000019048
rosa_multiflora	Rmu_co8191622.1_g000001 Rmu_co8329307.1_g000001 Rmu_sc0000704.1_g000050
rosa_roxburghii	Rroxscaffold_1G00019180 Rroxscaffold_3G00225210
rosa_rugosa	Rorug03G0338400 Rorug04G0195800 Rorug05G0494200 Rorug07G0296200 Rorug07G0296300 Rorug07G0296400 Rorug07G0296500 Rorug07G0296500 Rorug07G0296500 Rorug07G0296600 Rorug07G0296700 Rorug07G0296700
rosa_samantha	Rh1AG198700 Rh2AG167200 Rh2AG422000 Rh2BG174100 Rh2DG172600 Rh2DG587800 Rh3AG279400 Rh4AG190400 Rh5BG446700 Rh5DG459100 Rh6AG004200 Rh6AG382900 Rh6BG005900 Rh6CG003200 Rh6CG396200 Rh6DG003000 Rh7AG451000 Rh7BG422700 Rh7CG470600 Rh7DG440400
rosa_wichuraiana	Rw0G019890 Rw6G000460 Rw7G037490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	185
AatII	GACGTC	1 cut(s)	222
Acc36I	ACCTGC	1 cut(s)	918
AccBSI	CCGCTC	1 cut(s)	95
AccI	GTMKAC	1 cut(s)	279
AccII	CGCG	3 cut(s)	207, 420, 1110
AclWI	GGATC	5 cut(s)	12, 669, 747, 1525, 1541
AcoI	YGGCCR	8 cut(s)	127, 321, 396, 540, 546, 604, 999, 1273
AcsI	RAATTY	4 cut(s)	20, 820, 862, 1285
AcuI	CTGAAG	1 cut(s)	1412
AcyI	GRCGYC	2 cut(s)	219, 507
AfiI	CCNNNNNNNGG	7 cut(s)	61, 62, 294, 385, 516, 549, 619
AflIII	ACRYGT	1 cut(s)	810
AgsI	TTSAA	8 cut(s)	78, 819, 868, 958, 1099, 1346, 1436, 1483
AjiI	CACGTC	1 cut(s)	949
AjnI	CCWGG	3 cut(s)	293, 393, 1475
Alw21I	GWGCWC	5 cut(s)	276, 342, 348, 1107, 1191
Alw26I	GTCTC	3 cut(s)	217, 226, 1190
AlwI	GGATC	5 cut(s)	12, 669, 747, 1525, 1541
Ama87I	CYCGRG	5 cut(s)	68, 614, 676, 701, 1193
ApeKI	GCWGC	2 cut(s)	463, 1467
ApoI	RAATTY	4 cut(s)	20, 820, 862, 1285
AspLEI	GCGC	3 cut(s)	209, 420, 1080
AspS9I	GGNCC	4 cut(s)	65, 71, 651, 1041
AsuC2I	CCSGG	5 cut(s)	69, 70, 550, 649, 1334
AsuHPI	GGTGA	2 cut(s)	383, 1217
AvaI	CYCGRG	5 cut(s)	68, 614, 676, 701, 1193
AvaII	GGWCC	3 cut(s)	65, 651, 1041
BaeGI	GKGCMC	1 cut(s)	904
BalI	TGGCCA	2 cut(s)	323, 1001
BamHI	GGATCC	1 cut(s)	4
BanII	GRGCYC	4 cut(s)	276, 342, 1107, 1191
BauI	CACGAG	2 cut(s)	269, 341
BbsI	GAAGAC	1 cut(s)	807
Bbv12I	GWGCWC	5 cut(s)	276, 342, 348, 1107, 1191
BbvCI	CCTCAGC	1 cut(s)	1067
BbvI	GCAGC	2 cut(s)	475, 1479
BccI	CCATC	3 cut(s)	158, 1380, 1449
BceAI	ACGGC	5 cut(s)	118, 142, 194, 619, 976
BciT130I	CCWGG	3 cut(s)	295, 395, 1477
BcnI	CCSGG	5 cut(s)	69, 70, 550, 649, 1334
BcoDI	GTCTC	3 cut(s)	217, 226, 1190
BfaI	CTAG	4 cut(s)	332, 521, 1121, 1542
BfmI	CTRYAG	2 cut(s)	635, 1007
BfuAI	ACCTGC	1 cut(s)	918
BglII	AGATCT	1 cut(s)	1526
BisI	GCNGC	7 cut(s)	93, 195, 464, 583, 1111, 1276, 1468
BlsI	GCNGC	7 cut(s)	94, 196, 465, 584, 1112, 1277, 1469
Bme1390I	CCNGG	8 cut(s)	69, 70, 295, 395, 550, 649, 1334, 1477
Bme18I	GGWCC	3 cut(s)	65, 651, 1041
BmeT110I	CYCGRG	5 cut(s)	68, 614, 676, 701, 1193
BmgBI	CACGTC	1 cut(s)	949
BmgT120I	GGNCC	4 cut(s)	65, 71, 651, 1041
BmiI	GGNNCC	8 cut(s)	6, 66, 67, 377, 652, 715, 1043, 1313
BmrFI	CCNGG	8 cut(s)	69, 70, 295, 395, 550, 649, 1334, 1477
BmrI	ACTGGG	1 cut(s)	894
BmsI	GCATC	3 cut(s)	129, 153, 1078
BmuI	ACTGGG	1 cut(s)	894
BoxI	GACNNNNGTC	1 cut(s)	1128
BpiI	GAAGAC	1 cut(s)	807
BplI	GAGNNNNNCTC	2 cut(s)	464, 496
BpmI	CTGGAG	1 cut(s)	362
Bpu10I	CCTNAGC	1 cut(s)	1067
BpuEI	CTTGAG	4 cut(s)	485, 743, 1205, 1301
BpuMI	CCSGG	5 cut(s)	69, 70, 550, 649, 1334
BsaHI	GRCGYC	2 cut(s)	219, 507
BsaI	GGTCTC	1 cut(s)	1190
Bsc4I	CCNNNNNNNGG	7 cut(s)	61, 62, 294, 385, 516, 549, 619
Bse1I	ACTGG	6 cut(s)	379, 801, 889, 1024, 1164, 1404
Bse3DI	GCAATG	1 cut(s)	833
BseBI	CCWGG	3 cut(s)	295, 395, 1477
BseGI	GGATG	3 cut(s)	150, 1093, 1460
BseLI	CCNNNNNNNGG	7 cut(s)	61, 62, 294, 385, 516, 549, 619
BseMI	GCAATG	1 cut(s)	833
BseMII	CTCAG	4 cut(s)	425, 762, 1058, 1176
BseNI	ACTGG	6 cut(s)	379, 801, 889, 1024, 1164, 1404
BseRI	GAGGAG	6 cut(s)	87, 350, 581, 584, 587, 632
BseSI	GKGCMC	1 cut(s)	904
BseXI	GCAGC	2 cut(s)	475, 1479
BseYI	CCCAGC	1 cut(s)	626
BsgI	GTGCAG	1 cut(s)	482
Bsh1236I	CGCG	3 cut(s)	207, 420, 1110
Bsh1285I	CGRYCG	1 cut(s)	259
BsiEI	CGRYCG	1 cut(s)	259
BsiHKAI	GWGCWC	5 cut(s)	276, 342, 348, 1107, 1191
BsiHKCI	CYCGRG	5 cut(s)	68, 614, 676, 701, 1193
BsiSI	CCGG	5 cut(s)	69, 549, 648, 839, 1334
BslFI	GGGAC	5 cut(s)	31, 51, 596, 664, 1027
BslI	CCNNNNNNNGG	7 cut(s)	61, 62, 294, 385, 516, 549, 619
BsmAI	GTCTC	3 cut(s)	217, 226, 1190
BsmBI	CGTCTC	2 cut(s)	217, 226
BsmFI	GGGAC	5 cut(s)	31, 51, 596, 664, 1027
Bso31I	GGTCTC	1 cut(s)	1190
BsoBI	CYCGRG	5 cut(s)	68, 614, 676, 701, 1193
Bsp1286I	GDGCHC	6 cut(s)	276, 342, 348, 904, 1107, 1191
Bsp143I	GATC	7 cut(s)	4, 661, 739, 1177, 1517, 1526, 1546
Bsp19I	CCATGG	1 cut(s)	543
BspCNI	CTCAG	4 cut(s)	424, 763, 1059, 1177
BspFNI	CGCG	3 cut(s)	207, 420, 1110
BspLI	GGNNCC	8 cut(s)	6, 66, 67, 377, 652, 715, 1043, 1313
BspMAI	CTGCAG	1 cut(s)	639
BspMI	ACCTGC	1 cut(s)	918
BspPI	GGATC	5 cut(s)	12, 669, 747, 1525, 1541
BspQI	GCTCTTC	1 cut(s)	1263
BspTNI	GGTCTC	1 cut(s)	1190
BsrBI	CCGCTC	1 cut(s)	95
BsrDI	GCAATG	1 cut(s)	833
BsrI	ACTGG	6 cut(s)	379, 801, 889, 1024, 1164, 1404
BssMI	GATC	7 cut(s)	4, 661, 739, 1177, 1517, 1526, 1546
BssNI	GRCGYC	2 cut(s)	219, 507
BssSI	CACGAG	2 cut(s)	269, 341
BssT1I	CCWWGG	3 cut(s)	60, 288, 543
Bst2BI	CACGAG	2 cut(s)	269, 341
Bst2UI	CCWGG	3 cut(s)	295, 395, 1477
Bst4CI	ACNGT	1 cut(s)	693
Bst6I	CTCTTC	2 cut(s)	795, 1263
BstACI	GRCGYC	2 cut(s)	219, 507
BstC8I	GCNNGC	5 cut(s)	131, 300, 422, 426, 1424
BstDEI	CTNAG	5 cut(s)	411, 771, 896, 1067, 1185
BstDSI	CCRYGG	2 cut(s)	543, 1108
BstF5I	GGATG	3 cut(s)	150, 1093, 1460
BstFNI	CGCG	3 cut(s)	207, 420, 1110
BstHHI	GCGC	3 cut(s)	209, 420, 1080
BstKTI	GATC	7 cut(s)	7, 664, 742, 1180, 1520, 1529, 1549
BstMAI	GTCTC	3 cut(s)	217, 226, 1190
BstMBI	GATC	7 cut(s)	4, 661, 739, 1177, 1517, 1526, 1546
BstMCI	CGRYCG	1 cut(s)	259
BstMWI	GCNNNNNNNGC	5 cut(s)	117, 126, 299, 382, 960
BstNI	CCWGG	3 cut(s)	295, 395, 1477
BstNSI	RCATGY	1 cut(s)	1426
BstPAI	GACNNNNGTC	1 cut(s)	1128
BstSCI	CCNGG	8 cut(s)	67, 68, 293, 393, 548, 647, 1332, 1475
BstSFI	CTRYAG	2 cut(s)	635, 1007
BstSLI	GKGCMC	1 cut(s)	904
BstUI	CGCG	3 cut(s)	207, 420, 1110
BstV1I	GCAGC	2 cut(s)	475, 1479
BstV2I	GAAGAC	1 cut(s)	807
BstX2I	RGATCY	5 cut(s)	4, 739, 1517, 1526, 1546
BstYI	RGATCY	5 cut(s)	4, 739, 1517, 1526, 1546
BtgI	CCRYGG	2 cut(s)	543, 1108
BtgZI	GCGATG	1 cut(s)	600
BtrI	CACGTC	1 cut(s)	949
BtsCI	GGATG	3 cut(s)	150, 1093, 1460
BtsIMutI	CAGTG	1 cut(s)	386
BveI	ACCTGC	1 cut(s)	918
Cac8I	GCNNGC	5 cut(s)	131, 300, 422, 426, 1424
CfoI	GCGC	3 cut(s)	209, 420, 1080
Cfr13I	GGNCC	4 cut(s)	65, 71, 651, 1041
Cfr42I	CCGCGG	1 cut(s)	1111
Cfr9I	CCCGGG	1 cut(s)	68
CseI	GACGC	1 cut(s)	515
CviAII	CATG	6 cut(s)	28, 199, 544, 1253, 1375, 1423
DdeI	CTNAG	5 cut(s)	411, 771, 896, 1067, 1185
DpnI	GATC	7 cut(s)	6, 663, 741, 1179, 1519, 1528, 1548
DpnII	GATC	7 cut(s)	4, 661, 739, 1177, 1517, 1526, 1546
DrdI	GACNNNNNNGTC	1 cut(s)	185
DseDI	GACNNNNNNGTC	1 cut(s)	185
EaeI	YGGCCR	8 cut(s)	127, 321, 396, 540, 546, 604, 999, 1273
Eam1104I	CTCTTC	2 cut(s)	795, 1263
EarI	CTCTTC	2 cut(s)	795, 1263
EciI	GGCGGA	1 cut(s)	443
Ecl136II	GAGCTC	4 cut(s)	274, 340, 1105, 1189
Eco130I	CCWWGG	3 cut(s)	60, 288, 543
Eco147I	AGGCCT	2 cut(s)	644, 707
Eco24I	GRGCYC	4 cut(s)	276, 342, 1107, 1191
Eco31I	GGTCTC	1 cut(s)	1190
Eco32I	GATATC	1 cut(s)	1234
Eco47I	GGWCC	3 cut(s)	65, 651, 1041
Eco53kI	GAGCTC	4 cut(s)	274, 340, 1105, 1189
Eco57I	CTGAAG	1 cut(s)	1412
Eco88I	CYCGRG	5 cut(s)	68, 614, 676, 701, 1193
EcoICRI	GAGCTC	4 cut(s)	274, 340, 1105, 1189
EcoO109I	RGGNCCY	1 cut(s)	65
EcoRII	CCWGG	3 cut(s)	293, 393, 1475
EcoRV	GATATC	1 cut(s)	1234
EcoT14I	CCWWGG	3 cut(s)	60, 288, 543
EcoT38I	GRGCYC	4 cut(s)	276, 342, 1107, 1191
ErhI	CCWWGG	3 cut(s)	60, 288, 543
Esp3I	CGTCTC	2 cut(s)	217, 226
FaeI	CATG	6 cut(s)	31, 202, 547, 1256, 1378, 1426
FaqI	GGGAC	5 cut(s)	31, 51, 596, 664, 1027
FatI	CATG	6 cut(s)	27, 198, 543, 1252, 1374, 1422
FauI	CCCGC	5 cut(s)	56, 97, 362, 378, 1489
FblI	GTMKAC	1 cut(s)	279
Fnu4HI	GCNGC	7 cut(s)	93, 195, 464, 583, 1111, 1276, 1468
FokI	GGATG	3 cut(s)	137, 1100, 1467
FriOI	GRGCYC	4 cut(s)	276, 342, 1107, 1191
Fsp4HI	GCNGC	7 cut(s)	93, 195, 464, 583, 1111, 1276, 1468
FspBI	CTAG	4 cut(s)	332, 521, 1121, 1542
GlaI	GCGC	3 cut(s)	208, 419, 1079
GluI	GCNGC	7 cut(s)	93, 195, 464, 583, 1111, 1276, 1468
GsaI	CCCAGC	1 cut(s)	630
GsuI	CTGGAG	1 cut(s)	362
HapII	CCGG	5 cut(s)	69, 549, 648, 839, 1334
HgaI	GACGC	1 cut(s)	515
HhaI	GCGC	3 cut(s)	209, 420, 1080
Hin1I	GRCGYC	2 cut(s)	219, 507
Hin1II	CATG	6 cut(s)	31, 202, 547, 1256, 1378, 1426
Hin6I	GCGC	3 cut(s)	207, 418, 1078
HinP1I	GCGC	3 cut(s)	207, 418, 1078
HincII	GTYRAC	4 cut(s)	280, 670, 1137, 1461
HindII	GTYRAC	4 cut(s)	280, 670, 1137, 1461
HindIII	AAGCTT	2 cut(s)	494, 1013
HpaII	CCGG	5 cut(s)	69, 549, 648, 839, 1334
HphI	GGTGA	2 cut(s)	383, 1217
Hpy166II	GTNNAC	6 cut(s)	280, 391, 670, 1137, 1306, 1461
Hpy188I	TCNGA	6 cut(s)	139, 178, 217, 876, 1248, 1507
Hpy8I	GTNNAC	6 cut(s)	280, 391, 670, 1137, 1306, 1461
Hpy99I	CGWCG	3 cut(s)	128, 221, 281
HpyAV	CCTTC	8 cut(s)	84, 718, 862, 914, 1055, 1124, 1439, 1477
HpyCH4III	ACNGT	1 cut(s)	693
HpyCH4IV	ACGT	6 cut(s)	39, 219, 810, 948, 968, 1338
HpyCH4V	TGCA	6 cut(s)	202, 463, 478, 637, 859, 927
HpyF10VI	GCNNNNNNNGC	5 cut(s)	117, 126, 299, 382, 960
HpyF3I	CTNAG	5 cut(s)	411, 771, 896, 1067, 1185
HpySE526I	ACGT	6 cut(s)	39, 219, 810, 948, 968, 1338
Hsp92I	GRCGYC	2 cut(s)	219, 507
Hsp92II	CATG	6 cut(s)	31, 202, 547, 1256, 1378, 1426
HspAI	GCGC	3 cut(s)	207, 418, 1078
KflI	GGGWCCC	1 cut(s)	65
KspI	CCGCGG	1 cut(s)	1111
Kzo9I	GATC	7 cut(s)	4, 661, 739, 1177, 1517, 1526, 1546
LguI	GCTCTTC	1 cut(s)	1263
LmnI	GCTCC	9 cut(s)	100, 337, 381, 574, 719, 735, 1110, 1194, 1448
Lsp1109I	GCAGC	2 cut(s)	475, 1479
LweI	GCATC	3 cut(s)	129, 153, 1078
MaeI	CTAG	4 cut(s)	332, 521, 1121, 1542
MaeII	ACGT	6 cut(s)	39, 219, 810, 948, 968, 1338
MaeIII	GTNAC	2 cut(s)	446, 687
MalI	GATC	7 cut(s)	6, 663, 741, 1179, 1519, 1528, 1548
MbiI	CCGCTC	1 cut(s)	95
MboI	GATC	7 cut(s)	4, 661, 739, 1177, 1517, 1526, 1546
MboII	GAAGA	6 cut(s)	758, 807, 812, 1250, 1418, 1421
MfeI	CAATTG	1 cut(s)	846
MflI	RGATCY	5 cut(s)	4, 739, 1517, 1526, 1546
MhlI	GDGCHC	6 cut(s)	276, 342, 348, 904, 1107, 1191
MlsI	TGGCCA	2 cut(s)	323, 1001
MluCI	AATT	7 cut(s)	20, 561, 820, 846, 862, 1168, 1285
MluNI	TGGCCA	2 cut(s)	323, 1001
MlyI	GAGTC	5 cut(s)	305, 545, 782, 839, 905
MmeI	TCCRAC	5 cut(s)	162, 201, 240, 924, 1371
Mox20I	TGGCCA	2 cut(s)	323, 1001
MscI	TGGCCA	2 cut(s)	323, 1001
MseI	TTAA	4 cut(s)	156, 1028, 1211, 1299
MslI	CAYNNNNRTG	1 cut(s)	1098
Msp20I	TGGCCA	2 cut(s)	323, 1001
MspA1I	CMGCKG	1 cut(s)	1110
MspI	CCGG	5 cut(s)	69, 549, 648, 839, 1334
MspR9I	CCNGG	8 cut(s)	69, 70, 295, 395, 550, 649, 1334, 1477
MunI	CAATTG	1 cut(s)	846
MvaI	CCWGG	3 cut(s)	295, 395, 1477
MvnI	CGCG	3 cut(s)	207, 420, 1110
MwoI	GCNNNNNNNGC	5 cut(s)	117, 126, 299, 382, 960
NciI	CCSGG	5 cut(s)	69, 70, 550, 649, 1334
NcoI	CCATGG	1 cut(s)	543
NdeII	GATC	7 cut(s)	4, 661, 739, 1177, 1517, 1526, 1546
NlaIII	CATG	6 cut(s)	31, 202, 547, 1256, 1378, 1426
NlaIV	GGNNCC	8 cut(s)	6, 66, 67, 377, 652, 715, 1043, 1313
NmeAIII	GCCGAG	2 cut(s)	231, 535
NspI	RCATGY	1 cut(s)	1426
PaeI	GCATGC	1 cut(s)	1426
PceI	AGGCCT	2 cut(s)	644, 707
PciSI	GCTCTTC	1 cut(s)	1263
PcsI	WCGNNNNNNNCGW	2 cut(s)	276, 306
PfeI	GAWTC	5 cut(s)	631, 842, 1036, 1249, 1324
PfoI	TCCNGGA	1 cut(s)	647
PkrI	GCNGC	7 cut(s)	94, 196, 465, 584, 1112, 1277, 1469
PleI	GAGTC	5 cut(s)	305, 544, 781, 838, 905
PpsI	GAGTC	5 cut(s)	305, 544, 781, 838, 905
PpuMI	RGGWCCY	1 cut(s)	65
PshAI	GACNNNNGTC	1 cut(s)	1128
Psp124BI	GAGCTC	4 cut(s)	276, 342, 1107, 1191
Psp5II	RGGWCCY	1 cut(s)	65
Psp6I	CCWGG	3 cut(s)	293, 393, 1475
PspFI	CCCAGC	1 cut(s)	626
PspGI	CCWGG	3 cut(s)	293, 393, 1475
PspN4I	GGNNCC	8 cut(s)	6, 66, 67, 377, 652, 715, 1043, 1313
PspPI	GGNCC	4 cut(s)	65, 71, 651, 1041
PspPPI	RGGWCCY	1 cut(s)	65
PstI	CTGCAG	1 cut(s)	639
PsuI	RGATCY	5 cut(s)	4, 739, 1517, 1526, 1546
RseI	CAYNNNNRTG	1 cut(s)	1098
SacI	GAGCTC	4 cut(s)	276, 342, 1107, 1191
SacII	CCGCGG	1 cut(s)	1111
SalI	GTCGAC	1 cut(s)	278
SapI	GCTCTTC	1 cut(s)	1263
SaqAI	TTAA	4 cut(s)	156, 1028, 1211, 1299
SatI	GCNGC	7 cut(s)	93, 195, 464, 583, 1111, 1276, 1468
Sau3AI	GATC	7 cut(s)	4, 661, 739, 1177, 1517, 1526, 1546
Sau96I	GGNCC	4 cut(s)	65, 71, 651, 1041
SchI	GAGTC	5 cut(s)	305, 545, 782, 839, 905
ScrFI	CCNGG	8 cut(s)	69, 70, 295, 395, 550, 649, 1334, 1477
SduI	GDGCHC	6 cut(s)	276, 342, 348, 904, 1107, 1191
SfaNI	GCATC	3 cut(s)	129, 153, 1078
SfcI	CTRYAG	2 cut(s)	635, 1007
Sfr303I	CCGCGG	1 cut(s)	1111
SgrBI	CCGCGG	1 cut(s)	1111
SinI	GGWCC	3 cut(s)	65, 651, 1041
SmaI	CCCGGG	1 cut(s)	70
SmiMI	CAYNNNNRTG	1 cut(s)	1098
SmlI	CTYRAG	4 cut(s)	500, 758, 1220, 1280
SmoI	CTYRAG	4 cut(s)	500, 758, 1220, 1280
SphI	GCATGC	1 cut(s)	1426
Sse9I	AATT	7 cut(s)	20, 561, 820, 846, 862, 1168, 1285
SseBI	AGGCCT	2 cut(s)	644, 707
SspMI	CTAG	4 cut(s)	332, 521, 1121, 1542
SstI	GAGCTC	4 cut(s)	276, 342, 1107, 1191
StuI	AGGCCT	2 cut(s)	644, 707
StyD4I	CCNGG	8 cut(s)	67, 68, 293, 393, 548, 647, 1332, 1475
StyI	CCWWGG	3 cut(s)	60, 288, 543
TaaI	ACNGT	1 cut(s)	693
TaiI	ACGT	6 cut(s)	42, 222, 813, 951, 971, 1341
TaqI	TCGA	6 cut(s)	123, 279, 309, 468, 1146, 1230
TaqII	GACCGA	2 cut(s)	273, 1029
TasI	AATT	7 cut(s)	20, 561, 820, 846, 862, 1168, 1285
TauI	GCSGC	5 cut(s)	95, 197, 585, 1113, 1278
TfiI	GAWTC	5 cut(s)	631, 842, 1036, 1249, 1324
Tru1I	TTAA	4 cut(s)	156, 1028, 1211, 1299
Tru9I	TTAA	4 cut(s)	156, 1028, 1211, 1299
TscAI	CASTG	1 cut(s)	386
TseI	GCWGC	2 cut(s)	463, 1467
TspDTI	ATGAA	3 cut(s)	768, 1241, 1363
TspGWI	ACGGA	2 cut(s)	226, 304
TspMI	CCCGGG	1 cut(s)	68
TspRI	CASTG	1 cut(s)	386
VpaK11BI	GGWCC	3 cut(s)	65, 651, 1041
XapI	RAATTY	4 cut(s)	20, 820, 862, 1285
XbaI	TCTAGA	1 cut(s)	1120
XceI	RCATGY	1 cut(s)	1426
XmaI	CCCGGG	1 cut(s)	68
XmiI	GTMKAC	1 cut(s)	279
XspI	CTAG	4 cut(s)	332, 521, 1121, 1542
ZraI	GACGTC	1 cut(s)	220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.