Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0001144

Physical Location & Seq

Genomic Coordinates Reverse (-)

508422 .. 511030

Gene Structure 2609 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g00400.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGATCCCAACCCTTCCAGCTTCCCTATCCTCTCCTACGTCATGGACCGCATTCCCATCCTCGGCTCCACCGCCCCACGCGCCCTCGACATCTCCGACCTCGAGTCCATCCAAATCGACGGCGCCCAACAACAACCCTGCTCAGGGCTCCTCCACCAGATGCCCCACTTGTCCGACCCCAAAGTCATCGCCGCCATGACCCGCGCCGTCTCCGACGTCTCCCAGACCCGCTCCGTCCTCAACGCCCTCGGCCCCCGCCCCGATCACGAGGCCGTCGACACCGCCAAGGCCAAGCTCGCCCTCATCGACTCCTCTCTCTCCAAGAAGCTCGAGGACCTCGTCCTCTCCCCACGCCCCTCCGACGTCGACCGCTTCCAGTGGCGGGCCCACCTCGCCGAGCGCGAGCAGGAGTGCCGCGACTCCGCCGACAAAGAAAAGCAGGACTGCAAGGCCATTCTCCAGCTCGACGAGCTCCACGCCGCCTACGAGAAGCTTCTCAAGGACGCCGAGGAGAGGCTCAACAAGATTTATCACTCCGCCGAGGACGGCGTCGTCCAGGAGGAGCCGCCGGTCTCCGACCAGCTCCACGAGGAGGTCGTCGGCCTTCTGCACCAGGCCAACGGGACCGCGCTCGACCGCGTCAACCTCTCCGGCCGCCGCTTAAGGTTCTTGCCGGAGGCGTTCGGCAGGATCGCCGGGTTGCTACACCTTGATCTTTCCAGCAATGAGCTCAAGGTGATTCCTGATTCAATATGCGGACTGGAGAAGCTACAAGAGCTTAATTTGTCTTCCAATCTGTTGGAGTCACTGCCTGACACCATTGGCCTGCTGCAAAATCTGAAACTTCTCAGTGTCTCCGGCAACAAGCTCACTGCTCTTCCTGACTCTATCTGTCGTTGCAGGTCATTGGTGGAGTTGGATGTGAGTTTCAACAACCTCTCATACTTGCCAACCAACATTGGTTATGAGTTGGTCAATCTTCAGAAACTTTCCATACAATTAAACAAGATTCGTTCCCTTCCCACCTCTGTTTGTGAGCTGAGGTCTCTGCGCTCTTTGGATGCTCACTTTAATGAGCTGAGGGGCCTTCCACTGTCTTTTGGCCGATTGACCAATCTCCAAACTCTGAACCTTGCCAGCAACTTTACTGACCTCACTGAGCTGCCTGATACTTTTGGTGATCTAACCAACCTCAAAGAACTTGATCTCAGCAACAATCAGCTCCATGAACTGCCAGTTACATTTGGCCGCCTTGACAGTTTGACCAAACTTAACTTGGACGGAAACCCTCTTGTGTTTCCTCCTCCTGAAATAGTCCAACAAGGTGTAGAAGCTGTCAAGCTCTGTATGGCCAAGAGGTGGTTAGAGATATTGGTGGAAGAAGAAAGGAAGAGCATGCTTCAAGTGGAAGAAGAAGCAGAAACAGGATGGTTGACACGAAGCACTTCCTGGTTGACACGCAGCCTTTCAGGTGTTTCTGGGTATCTGTCTCCAAGATCTCCCAGAGACCCTGCTCTTGATCAGCAGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005912 GO:0006810 GO:0007043 GO:0007154 GO:0007163 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016323 GO:0022607 GO:0023052 GO:0030011 GO:0030029 GO:0030054 GO:0032501 GO:0032502 GO:0033036 GO:0033043 GO:0034329 GO:0034330 GO:0035088 GO:0035090 GO:0035239 GO:0035295 GO:0042886 GO:0044085 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045108 GO:0045184 GO:0045197 GO:0045199 GO:0045216 GO:0048229 GO:0048513 GO:0048546 GO:0048557 GO:0048562 GO:0048565 GO:0048566 GO:0048568 GO:0048598 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051234 GO:0051493 GO:0051716 GO:0055046 GO:0055123 GO:0061245 GO:0065007 GO:0070161 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0098590

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8

Protein Analysis

511

Amino Acids

56.74

Weight (kDa)

5.04

Isoelectric Point (pI)

48.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	211 - 267	2.8e-10	Leucine rich repeat
LRR_8	PF13855	257 - 313	1.6e-08	Leucine rich repeat
LRR_8	PF13855	301 - 360	3.4e-07	Leucine rich repeat
LRR_14	PF23598	312 - 380	3e-08	Leucine-rich repeat region
LRR_4	PF12799	349 - 389	7.8e-06	Leucine Rich repeats (2 copies)
LRR_14	PF23598	368 - 428	5.5e-07	Leucine-rich repeat region
LRR_8	PF13855	371 - 431	5e-11	Leucine rich repeat
LRR_4	PF12799	396 - 430	2.7e-06	Leucine Rich repeats (2 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11330 AT5G05850
fragaria_vesca	FvH4_2g00400 FvH4_5g35210 FvH4_5g35210 FvH4_5g35210
malus_domestica	MD05G1037800.v1.1 MD10G1041600.v1.1
prunus_persica	Prupe.8G003900_v2.0.a1
pyrus_communis	pycom05g02800 pycom10g02870
rosa_chinensis	RchiOBHm_Chr6g0249641 RchiOBHm_Chr7g0236341
rosa_laevigata	RLG00000001082 RLG00000015555 RLG00000018499 RLG00000018876 RLG00000019048
rosa_multiflora	Rmu_co8191622.1_g000001 Rmu_co8329307.1_g000001 Rmu_sc0000704.1_g000050
rosa_roxburghii	Rroxscaffold_1G00019180 Rroxscaffold_3G00225210
rosa_rugosa	Rorug03G0338400 Rorug04G0195800 Rorug05G0494200 Rorug07G0296200 Rorug07G0296300 Rorug07G0296400 Rorug07G0296500 Rorug07G0296500 Rorug07G0296500 Rorug07G0296600 Rorug07G0296700 Rorug07G0296700
rosa_samantha	Rh1AG198700 Rh2AG167200 Rh2AG422000 Rh2BG174100 Rh2DG172600 Rh2DG587800 Rh3AG279400 Rh4AG190400 Rh5BG446700 Rh5DG459100 Rh6AG004200 Rh6AG382900 Rh6BG005900 Rh6CG003200 Rh6CG396200 Rh6DG003000 Rh7AG451000 Rh7BG422700 Rh7CG470600 Rh7DG440400
rosa_wichuraiana	Rw0G019890 Rw6G000460 Rw7G037490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	182, 551
AatII	GACGTC	2 cut(s)	219, 366
Acc36I	ACCTGC	1 cut(s)	891
AccB1I	GGYRCC	1 cut(s)	122
AccB7I	CCANNNNNTGG	1 cut(s)	1359
AccBSI	CCGCTC	1 cut(s)	231
AccI	GTMKAC	2 cut(s)	276, 366
AccII	CGCG	6 cut(s)	81, 204, 402, 417, 629, 639
AclWI	GGATC	2 cut(s)	12, 698
AcoI	YGGCCR	4 cut(s)	652, 1102, 1246, 1350
AcuI	CTGAAG	1 cut(s)	965
AcyI	GRCGYC	5 cut(s)	123, 216, 363, 504, 549
AfiI	CCNNNNNNNGG	7 cut(s)	62, 143, 144, 382, 513, 592, 1359
AflII	CTTAAG	1 cut(s)	661
AgsI	TTSAA	3 cut(s)	750, 931, 1403
AhdI	GACNNNNNGTC	1 cut(s)	103
AjnI	CCWGG	3 cut(s)	555, 612, 1448
Alw21I	GWGCWC	2 cut(s)	474, 732
Alw26I	GTCTC	7 cut(s)	214, 223, 577, 859, 1050, 1494, 1500
AlwI	GGATC	2 cut(s)	12, 698
Ama87I	CYCGRG	2 cut(s)	101, 329
ApaI	GGGCCC	1 cut(s)	388
ApeKI	GCWGC	3 cut(s)	829, 1162, 1461
Asp700I	GAANNNNTTC	1 cut(s)	1444
AspLEI	GCGC	6 cut(s)	83, 125, 206, 402, 631, 1053
AspS9I	GGNCC	7 cut(s)	46, 251, 334, 384, 385, 624, 1084
AsuC2I	CCSGG	1 cut(s)	697
AsuHPI	GGTGA	2 cut(s)	748, 1190
AvaI	CYCGRG	2 cut(s)	101, 329
AvaII	GGWCC	3 cut(s)	46, 334, 624
BaeGI	GKGCMC	1 cut(s)	388
BalI	TGGCCA	1 cut(s)	1352
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	1 cut(s)	122
BanII	GRGCYC	4 cut(s)	150, 388, 474, 732
BauI	CACGAG	2 cut(s)	266, 587
BbsI	GAAGAC	1 cut(s)	780
Bbv12I	GWGCWC	2 cut(s)	474, 732
BbvCI	CCTCAGC	2 cut(s)	1040, 1079
BbvI	GCAGC	3 cut(s)	816, 1149, 1473
BccI	CCATC	3 cut(s)	65, 116, 1422
BceAI	ACGGC	4 cut(s)	136, 191, 257, 562
BciT130I	CCWGG	3 cut(s)	557, 614, 1450
BclI	TGATCA	1 cut(s)	1519
BcnI	CCSGG	1 cut(s)	697
BcoDI	GTCTC	7 cut(s)	214, 223, 577, 859, 1050, 1494, 1500
BfoI	RGCGCY	1 cut(s)	126
BfrI	CTTAAG	1 cut(s)	661
BfuAI	ACCTGC	1 cut(s)	891
BglII	AGATCT	1 cut(s)	1496
Bme1390I	CCNGG	4 cut(s)	557, 614, 697, 1450
Bme18I	GGWCC	3 cut(s)	46, 334, 624
BmeRI	GACNNNNNGTC	1 cut(s)	103
BmeT110I	CYCGRG	2 cut(s)	101, 329
BmgT120I	GGNCC	7 cut(s)	46, 251, 334, 384, 385, 624, 1084
BmiI	GGNNCC	9 cut(s)	6, 67, 124, 149, 253, 386, 564, 625, 1085
BmrFI	CCNGG	4 cut(s)	557, 614, 697, 1450
BmsI	GCATC	2 cut(s)	150, 1051
BpiI	GAAGAC	1 cut(s)	780
BpmI	CTGGAG	2 cut(s)	443, 782
Bpu10I	CCTNAGC	3 cut(s)	142, 1040, 1079
BpuEI	CTTGAG	2 cut(s)	482, 716
BpuMI	CCSGG	1 cut(s)	697
BsaHI	GRCGYC	5 cut(s)	123, 216, 363, 504, 549
BsaI	GGTCTC	3 cut(s)	577, 1050, 1500
BsaJI	CCNNGG	5 cut(s)	61, 247, 285, 507, 540
Bsc4I	CCNNNNNNNGG	7 cut(s)	62, 143, 144, 382, 513, 592, 1359
Bse118I	RCCGGY	1 cut(s)	568
Bse1I	ACTGG	3 cut(s)	376, 765, 1235
Bse3DI	GCAATG	1 cut(s)	730
BseBI	CCWGG	3 cut(s)	557, 614, 1450
BseDI	CCNNGG	5 cut(s)	61, 247, 285, 507, 540
BseGI	GGATG	5 cut(s)	57, 108, 925, 1066, 1433
BseLI	CCNNNNNNNGG	7 cut(s)	62, 143, 144, 382, 513, 592, 1359
BseMI	GCAATG	1 cut(s)	730
BseMII	CTCAG	6 cut(s)	156, 862, 1031, 1070, 1149, 1222
BseNI	ACTGG	3 cut(s)	376, 765, 1235
BseRI	GAGGAG	6 cut(s)	140, 301, 524, 575, 605, 1293
BseSI	GKGCMC	1 cut(s)	388
BseX3I	CGGCCG	1 cut(s)	652
BseXI	GCAGC	3 cut(s)	816, 1149, 1473
BsgI	GTGCAG	1 cut(s)	593
Bsh1236I	CGCG	6 cut(s)	81, 204, 402, 417, 629, 639
Bsh1285I	CGRYCG	3 cut(s)	370, 637, 655
BshNI	GGYRCC	1 cut(s)	122
BsiEI	CGRYCG	3 cut(s)	370, 637, 655
BsiHKAI	GWGCWC	2 cut(s)	474, 732
BsiHKCI	CYCGRG	2 cut(s)	101, 329
BsiSI	CCGG	5 cut(s)	569, 651, 674, 696, 858
BslFI	GGGAC	1 cut(s)	637
BslI	CCNNNNNNNGG	7 cut(s)	62, 143, 144, 382, 513, 592, 1359
BsmAI	GTCTC	7 cut(s)	214, 223, 577, 859, 1050, 1494, 1500
BsmBI	CGTCTC	2 cut(s)	214, 223
BsmFI	GGGAC	1 cut(s)	637
BsmI	GAATGC	1 cut(s)	51
Bso31I	GGTCTC	3 cut(s)	577, 1050, 1500
BsoBI	CYCGRG	2 cut(s)	101, 329
Bsp120I	GGGCCC	1 cut(s)	384
Bsp1286I	GDGCHC	4 cut(s)	150, 388, 474, 732
Bsp143I	GATC	8 cut(s)	4, 262, 690, 712, 1180, 1204, 1496, 1519
BspCNI	CTCAG	6 cut(s)	155, 861, 1032, 1071, 1150, 1221
BspFNI	CGCG	6 cut(s)	81, 204, 402, 417, 629, 639
BspLI	GGNNCC	9 cut(s)	6, 67, 124, 149, 253, 386, 564, 625, 1085
BspMI	ACCTGC	1 cut(s)	891
BspPI	GGATC	2 cut(s)	12, 698
BspQI	GCTCTTC	2 cut(s)	882, 1385
BspT107I	GGYRCC	1 cut(s)	122
BspTI	CTTAAG	1 cut(s)	661
BspTNI	GGTCTC	3 cut(s)	577, 1050, 1500
BsrBI	CCGCTC	1 cut(s)	231
BsrDI	GCAATG	1 cut(s)	730
BsrFI	RCCGGY	1 cut(s)	568
BsrI	ACTGG	3 cut(s)	376, 765, 1235
BssAI	RCCGGY	1 cut(s)	568
BssECI	CCNNGG	5 cut(s)	61, 247, 285, 507, 540
BssMI	GATC	8 cut(s)	4, 262, 690, 712, 1180, 1204, 1496, 1519
BssNI	GRCGYC	5 cut(s)	123, 216, 363, 504, 549
BssSI	CACGAG	2 cut(s)	266, 587
BssT1I	CCWWGG	1 cut(s)	285
Bst2BI	CACGAG	2 cut(s)	266, 587
Bst2UI	CCWGG	3 cut(s)	557, 614, 1450
Bst4CI	ACNGT	2 cut(s)	1095, 1259
Bst6I	CTCTTC	2 cut(s)	882, 1385
BstACI	GRCGYC	5 cut(s)	123, 216, 363, 504, 549
BstAFI	CTTAAG	1 cut(s)	661
BstC8I	GCNNGC	6 cut(s)	297, 384, 404, 827, 1138, 1397
BstDEI	CTNAG	6 cut(s)	142, 848, 1040, 1079, 1158, 1208
BstF5I	GGATG	5 cut(s)	57, 108, 925, 1066, 1433
BstFNI	CGCG	6 cut(s)	81, 204, 402, 417, 629, 639
BstH2I	RGCGCY	1 cut(s)	126
BstHHI	GCGC	6 cut(s)	83, 125, 206, 402, 631, 1053
BstKTI	GATC	8 cut(s)	7, 265, 693, 715, 1183, 1207, 1499, 1522
BstMAI	GTCTC	7 cut(s)	214, 223, 577, 859, 1050, 1494, 1500
BstMBI	GATC	8 cut(s)	4, 262, 690, 712, 1180, 1204, 1496, 1519
BstMCI	CGRYCG	3 cut(s)	370, 637, 655
BstMWI	GCNNNNNNNGC	5 cut(s)	80, 296, 392, 469, 775
BstNI	CCWGG	3 cut(s)	557, 614, 1450
BstNSI	RCATGY	1 cut(s)	1399
BstSCI	CCNGG	4 cut(s)	555, 612, 695, 1448
BstSLI	GKGCMC	1 cut(s)	388
BstUI	CGCG	6 cut(s)	81, 204, 402, 417, 629, 639
BstV1I	GCAGC	3 cut(s)	816, 1149, 1473
BstV2I	GAAGAC	1 cut(s)	780
BstX2I	RGATCY	2 cut(s)	4, 1496
BstXI	CCANNNNNNTGG	1 cut(s)	799
BstYI	RGATCY	2 cut(s)	4, 1496
BstZI	CGGCCG	1 cut(s)	652
BtgZI	GCGATG	1 cut(s)	172
BtsCI	GGATG	5 cut(s)	57, 108, 925, 1066, 1433
BtsI	GCAGTG	2 cut(s)	806, 870
BtsIMutI	CAGTG	6 cut(s)	383, 806, 856, 870, 1091, 1155
BveI	ACCTGC	1 cut(s)	891
Cac8I	GCNNGC	6 cut(s)	297, 384, 404, 827, 1138, 1397
CfoI	GCGC	6 cut(s)	83, 125, 206, 402, 631, 1053
Cfr10I	RCCGGY	1 cut(s)	568
Cfr13I	GGNCC	7 cut(s)	46, 251, 334, 384, 385, 624, 1084
CseI	GACGC	3 cut(s)	512, 538, 628
CviAII	CATG	4 cut(s)	43, 196, 1226, 1396
DdeI	CTNAG	6 cut(s)	142, 848, 1040, 1079, 1158, 1208
DinI	GGCGCC	1 cut(s)	124
DpnI	GATC	8 cut(s)	6, 264, 692, 714, 1182, 1206, 1498, 1521
DpnII	GATC	8 cut(s)	4, 262, 690, 712, 1180, 1204, 1496, 1519
DrdI	GACNNNNNNGTC	2 cut(s)	182, 551
DriI	GACNNNNNGTC	1 cut(s)	103
DseDI	GACNNNNNNGTC	2 cut(s)	182, 551
EaeI	YGGCCR	4 cut(s)	652, 1102, 1246, 1350
EagI	CGGCCG	1 cut(s)	652
Eam1104I	CTCTTC	2 cut(s)	882, 1385
Eam1105I	GACNNNNNGTC	1 cut(s)	103
EarI	CTCTTC	2 cut(s)	882, 1385
EciI	GGCGGA	2 cut(s)	412, 526
Ecl136II	GAGCTC	2 cut(s)	472, 730
EclXI	CGGCCG	1 cut(s)	652
Eco130I	CCWWGG	1 cut(s)	285
Eco24I	GRGCYC	4 cut(s)	150, 388, 474, 732
Eco31I	GGTCTC	3 cut(s)	577, 1050, 1500
Eco47I	GGWCC	3 cut(s)	46, 334, 624
Eco52I	CGGCCG	1 cut(s)	652
Eco53kI	GAGCTC	2 cut(s)	472, 730
Eco57I	CTGAAG	1 cut(s)	965
Eco88I	CYCGRG	2 cut(s)	101, 329
EcoICRI	GAGCTC	2 cut(s)	472, 730
EcoO109I	RGGNCCY	2 cut(s)	334, 1084
EcoRII	CCWGG	3 cut(s)	555, 612, 1448
EcoT14I	CCWWGG	1 cut(s)	285
EcoT38I	GRGCYC	4 cut(s)	150, 388, 474, 732
EgeI	GGCGCC	1 cut(s)	124
EheI	GGCGCC	1 cut(s)	124
ErhI	CCWWGG	1 cut(s)	285
Esp3I	CGTCTC	2 cut(s)	214, 223
FaeI	CATG	4 cut(s)	46, 199, 1229, 1399
FaiI	YATR	9 cut(s)	44, 197, 754, 943, 966, 995, 1227, 1349, 1397
FaqI	GGGAC	1 cut(s)	637
FatI	CATG	4 cut(s)	42, 195, 1225, 1395
FauI	CCCGC	4 cut(s)	209, 236, 263, 375
FbaI	TGATCA	1 cut(s)	1519
FblI	GTMKAC	2 cut(s)	276, 366
FokI	GGATG	5 cut(s)	44, 95, 932, 1073, 1440
FriOI	GRGCYC	4 cut(s)	150, 388, 474, 732
GlaI	GCGC	6 cut(s)	82, 124, 205, 401, 630, 1052
GsuI	CTGGAG	2 cut(s)	443, 782
HaeII	RGCGCY	1 cut(s)	126
HapII	CCGG	5 cut(s)	569, 651, 674, 696, 858
HgaI	GACGC	3 cut(s)	512, 538, 628
HhaI	GCGC	6 cut(s)	83, 125, 206, 402, 631, 1053
Hin1I	GRCGYC	5 cut(s)	123, 216, 363, 504, 549
Hin1II	CATG	4 cut(s)	46, 199, 1229, 1399
Hin6I	GCGC	6 cut(s)	81, 123, 204, 400, 629, 1051
HinP1I	GCGC	6 cut(s)	81, 123, 204, 400, 629, 1051
HincII	GTYRAC	5 cut(s)	277, 367, 643, 1434, 1455
HindII	GTYRAC	5 cut(s)	277, 367, 643, 1434, 1455
HindIII	AAGCTT	1 cut(s)	491
HinfI	GANTC	8 cut(s)	104, 308, 419, 739, 746, 803, 884, 1009
HpaII	CCGG	5 cut(s)	569, 651, 674, 696, 858
HphI	GGTGA	2 cut(s)	748, 1190
Hpy166II	GTNNAC	5 cut(s)	277, 367, 643, 1434, 1455
Hpy188I	TCNGA	8 cut(s)	97, 175, 214, 361, 577, 840, 984, 1128
Hpy188III	TCNNGA	5 cut(s)	266, 743, 881, 1307, 1517
Hpy8I	GTNNAC	5 cut(s)	277, 367, 643, 1434, 1455
Hpy99I	CGWCG	8 cut(s)	122, 218, 278, 365, 368, 470, 554, 602
HpyAV	CCTTC	4 cut(s)	24, 614, 1028, 1097
HpyCH4III	ACNGT	2 cut(s)	1095, 1259
HpyCH4IV	ACGT	3 cut(s)	39, 216, 363
HpyCH4V	TGCA	4 cut(s)	447, 610, 832, 900
HpyF10VI	GCNNNNNNNGC	5 cut(s)	80, 296, 392, 469, 775
HpyF3I	CTNAG	6 cut(s)	142, 848, 1040, 1079, 1158, 1208
HpySE526I	ACGT	3 cut(s)	39, 216, 363
Hsp92I	GRCGYC	5 cut(s)	123, 216, 363, 504, 549
Hsp92II	CATG	4 cut(s)	46, 199, 1229, 1399
HspAI	GCGC	6 cut(s)	81, 123, 204, 400, 629, 1051
KasI	GGCGCC	1 cut(s)	122
Ksp22I	TGATCA	1 cut(s)	1519
Kzo9I	GATC	8 cut(s)	4, 262, 690, 712, 1180, 1204, 1496, 1519
LguI	GCTCTTC	2 cut(s)	882, 1385
LmnI	GCTCC	7 cut(s)	71, 153, 236, 477, 562, 588, 1227
Lsp1109I	GCAGC	3 cut(s)	816, 1149, 1473
LweI	GCATC	2 cut(s)	150, 1051
MaeII	ACGT	3 cut(s)	39, 216, 363
MaeIII	GTNAC	2 cut(s)	804, 1237
MalI	GATC	8 cut(s)	6, 264, 692, 714, 1182, 1206, 1498, 1521
MbiI	CCGCTC	1 cut(s)	231
MboI	GATC	8 cut(s)	4, 262, 690, 712, 1180, 1204, 1496, 1519
MboII	GAAGA	8 cut(s)	780, 869, 971, 1391, 1394, 1402, 1421, 1424
MflI	RGATCY	2 cut(s)	4, 1496
MhlI	GDGCHC	4 cut(s)	150, 388, 474, 732
MlsI	TGGCCA	1 cut(s)	1352
MluCI	AATT	2 cut(s)	781, 998
MluNI	TGGCCA	1 cut(s)	1352
Mly113I	GGCGCC	1 cut(s)	123
MlyI	GAGTC	5 cut(s)	113, 302, 413, 812, 878
MmeI	TCCRAC	8 cut(s)	120, 198, 237, 384, 600, 780, 897, 1342
Mox20I	TGGCCA	1 cut(s)	1352
MroXI	GAANNNNTTC	1 cut(s)	1444
MscI	TGGCCA	1 cut(s)	1352
MseI	TTAA	5 cut(s)	662, 780, 1001, 1071, 1272
MslI	CAYNNNNRTG	1 cut(s)	1071
Msp20I	TGGCCA	1 cut(s)	1352
MspCI	CTTAAG	1 cut(s)	661
MspI	CCGG	5 cut(s)	569, 651, 674, 696, 858
MspR9I	CCNGG	4 cut(s)	557, 614, 697, 1450
Mva1269I	GAATGC	1 cut(s)	51
MvaI	CCWGG	3 cut(s)	557, 614, 1450
MvnI	CGCG	6 cut(s)	81, 204, 402, 417, 629, 639
MwoI	GCNNNNNNNGC	5 cut(s)	80, 296, 392, 469, 775
NarI	GGCGCC	1 cut(s)	123
NciI	CCSGG	1 cut(s)	697
NdeII	GATC	8 cut(s)	4, 262, 690, 712, 1180, 1204, 1496, 1519
NlaIII	CATG	4 cut(s)	46, 199, 1229, 1399
NlaIV	GGNNCC	9 cut(s)	6, 67, 124, 149, 253, 386, 564, 625, 1085
NmeAIII	GCCGAG	5 cut(s)	42, 228, 421, 532, 565
NmuCI	GTSAC	1 cut(s)	804
NspI	RCATGY	1 cut(s)	1399
PaeI	GCATGC	1 cut(s)	1399
PaeR7I	CTCGAG	2 cut(s)	101, 329
PciSI	GCTCTTC	2 cut(s)	882, 1385
PcsI	WCGNNNNNNNCGW	7 cut(s)	93, 273, 303, 336, 399, 483, 594
PctI	GAATGC	1 cut(s)	51
PdmI	GAANNNNTTC	1 cut(s)	1444
PfeI	GAWTC	3 cut(s)	739, 746, 1009
PflFI	GACNNNGTC	3 cut(s)	338, 548, 638
PflMI	CCANNNNNTGG	1 cut(s)	1359
PfoI	TCCNGGA	1 cut(s)	555
PleI	GAGTC	5 cut(s)	112, 302, 413, 811, 878
PluTI	GGCGCC	1 cut(s)	126
PpsI	GAGTC	5 cut(s)	112, 302, 413, 811, 878
PpuMI	RGGWCCY	1 cut(s)	334
Psp124BI	GAGCTC	2 cut(s)	474, 732
Psp5II	RGGWCCY	1 cut(s)	334
Psp6I	CCWGG	3 cut(s)	555, 612, 1448
PspGI	CCWGG	3 cut(s)	555, 612, 1448
PspN4I	GGNNCC	9 cut(s)	6, 67, 124, 149, 253, 386, 564, 625, 1085
PspOMI	GGGCCC	1 cut(s)	384
PspPI	GGNCC	7 cut(s)	46, 251, 334, 384, 385, 624, 1084
PspPPI	RGGWCCY	1 cut(s)	334
PspXI	VCTCGAGB	2 cut(s)	101, 329
PsuI	RGATCY	2 cut(s)	4, 1496
PsyI	GACNNNGTC	3 cut(s)	338, 548, 638
RseI	CAYNNNNRTG	1 cut(s)	1071
SacI	GAGCTC	2 cut(s)	474, 732
SalI	GTCGAC	2 cut(s)	275, 365
SapI	GCTCTTC	2 cut(s)	882, 1385
SaqAI	TTAA	5 cut(s)	662, 780, 1001, 1071, 1272
Sau3AI	GATC	8 cut(s)	4, 262, 690, 712, 1180, 1204, 1496, 1519
Sau96I	GGNCC	7 cut(s)	46, 251, 334, 384, 385, 624, 1084
SchI	GAGTC	5 cut(s)	113, 302, 413, 812, 878
ScrFI	CCNGG	4 cut(s)	557, 614, 697, 1450
SduI	GDGCHC	4 cut(s)	150, 388, 474, 732
SfaNI	GCATC	2 cut(s)	150, 1051
SfoI	GGCGCC	1 cut(s)	124
Sfr274I	CTCGAG	2 cut(s)	101, 329
SinI	GGWCC	3 cut(s)	46, 334, 624
SlaI	CTCGAG	2 cut(s)	101, 329
SmiMI	CAYNNNNRTG	1 cut(s)	1071
SmlI	CTYRAG	5 cut(s)	101, 329, 497, 661, 731
SmoI	CTYRAG	5 cut(s)	101, 329, 497, 661, 731
SphI	GCATGC	1 cut(s)	1399
Sse9I	AATT	2 cut(s)	781, 998
SspDI	GGCGCC	1 cut(s)	122
SstI	GAGCTC	2 cut(s)	474, 732
StyD4I	CCNGG	4 cut(s)	555, 612, 695, 1448
StyI	CCWWGG	1 cut(s)	285
TaaI	ACNGT	2 cut(s)	1095, 1259
TaiI	ACGT	3 cut(s)	42, 219, 366
TaqI	TCGA	9 cut(s)	87, 102, 117, 276, 306, 330, 366, 465, 633
TasI	AATT	2 cut(s)	781, 998
TauI	GCSGC	7 cut(s)	194, 417, 482, 568, 657, 660, 1251
TfiI	GAWTC	3 cut(s)	739, 746, 1009
Tru1I	TTAA	5 cut(s)	662, 780, 1001, 1071, 1272
Tru9I	TTAA	5 cut(s)	662, 780, 1001, 1071, 1272
TscAI	CASTG	6 cut(s)	383, 813, 856, 877, 1098, 1162
TseFI	GTSAC	1 cut(s)	804
TseI	GCWGC	3 cut(s)	829, 1162, 1461
Tsp45I	GTSAC	1 cut(s)	804
TspDTI	ATGAA	1 cut(s)	1242
TspGWI	ACGGA	2 cut(s)	223, 1296
TspRI	CASTG	6 cut(s)	383, 813, 856, 877, 1098, 1162
Tth111I	GACNNNGTC	3 cut(s)	338, 548, 638
Van91I	CCANNNNNTGG	1 cut(s)	1359
Vha464I	CTTAAG	1 cut(s)	661
VpaK11BI	GGWCC	3 cut(s)	46, 334, 624
XceI	RCATGY	1 cut(s)	1399
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1273
XhoI	CTCGAG	2 cut(s)	101, 329
XmiI	GTMKAC	2 cut(s)	276, 366
XmnI	GAANNNNTTC	1 cut(s)	1444
ZraI	GACGTC	2 cut(s)	217, 364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.