Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001144

Physical Location & Seq

Genomic Coordinates Reverse (-)

5579372 .. 5581807

Gene Structure 2436 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ22382

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGATCCGAACCCGTCCAACTTCCCCATCCTCTCCTACGTCATGGACCGCCTTTCCACCGTAGGATCCAAGTCCCCCGTCGACGACATCTCCGACCTCGAGTCCATTCAAATCGACGATGGCCAGCCCCAGTTGATCAAACCCCACCAATCATCCTCATCCTCTGCCCTCCTCCACCAGATGCCCCACCTCTCCGACCCCAAAGTCATCGCCGCCATGACCCGCGCCGTCTCCGACGTCGCCCAGACCCGCTCCGTCCTCCACGCCCTCGGCGACCGTCCCGACCACGAGGCCGTCGACGCCGCCAAGGCCAAGCTCGCCCACATCGAGTCCGCTCTCTCCAAGAAGCTCGAGGACCTCGTCCTCTCCCCCCGCCCCTCCGACGTCGACCGCTTCCAGTGGCGGGCCCACCTCGCCGAGCGCGAGCAGGAGTGCCGCGACGCCGCCGAGAAGGAGAAGCGCGACTGCAAGGCCATTCTCCAGCTCGACGAGCTCCACGCCTCCTACGAGAAGCTTCTCAAGGACGCCGAGGACAGGCTCACCAAGATTTATCGCTCCGCCGAGGACGGAATCGTCGAGGAGCCGCCGCCGGTCACCGACCAAGTTCATGAGGAGGTCGTCGGCATTCTGCAGCAGGCTTCCGGCACTGCGCTCGACCGGATCAACCTCTCCGGCCGCCGCCTCCGGTGCTTGCCGGAGGCATTTGGCAGGATCACCGGATTGCTACACCTTGATGTTTCCAACAATGAGCTCCAGGTTATTCCTGATACAATATCTGGATTGGAGAAGCTACAAGAGCTTAACTTGTCTTCCAATCTGTTGGAGACACTGCCCGACACCATTGGCCTGCTGCAAAATTTGAAGGTTCTGAATGTCTCCGGCAACAAGCTGGCTGCTCTTCCTGACTCTATCTGTCATTGCAGGTCATTGGTGGAGTTGGATGTGAGTTTCAACAACCTCACATACTTGCCAACCAACATTGGTTATGAGTTGGTCAATCTTCAGAAGCTTTCCATGCAATTAAACAAAATCCGTTCCCTTCCCACCTCTGTTTGTGAGCTGAGGTCTCTGCGCTCCTTGGATGCTCACTTCAATGAGCTTCGGGGCCTTCCACTGGCTTTTGGCCGATTGGCCAATCTCCAAAGTCTGAACCTTGCCAGCAACTTTACTGACCTTACTGAGCTGCCCGATACTTTTGGTGATCTAACCAACCTCAAGGAACTTGATCTCAGTAACAATCAGATTCATGCTCTGCCAGATACATTTGGCCGCCTTGACAATTTGACCAAACTTAACTTGGACGGAAACCCTCTTGTGCTTCCACCCCCTGACGTAGTTCAACAAGGTGTTGACGCAGTCAAGCTCTTTATGGCCAAGAGGTGGTTGGAGATACTGGTGGAAGAAGAAAGGAAAAGCATGCTTCAAGTACAAGAAGAAGCAGAAACTGGATGGTTGACACGCAGCACTTCCTGGTTGACACGCAGCCTTTCAGGTGTTTCTGGATATCTGTCTCCAAGATCTCCAAGAGACCCTATTCTTGATCAGCAGCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005912 GO:0006810 GO:0007043 GO:0007154 GO:0007163 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016323 GO:0022607 GO:0023052 GO:0030011 GO:0030029 GO:0030054 GO:0032501 GO:0032502 GO:0033036 GO:0033043 GO:0034329 GO:0034330 GO:0035088 GO:0035090 GO:0035239 GO:0035295 GO:0042886 GO:0044085 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045108 GO:0045184 GO:0045197 GO:0045199 GO:0045216 GO:0048229 GO:0048513 GO:0048546 GO:0048557 GO:0048562 GO:0048565 GO:0048566 GO:0048568 GO:0048598 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051234 GO:0051493 GO:0051716 GO:0055046 GO:0055123 GO:0061245 GO:0065007 GO:0070161 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0098590

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8

Protein Analysis

517

Amino Acids

57.46

Weight (kDa)

5.06

Isoelectric Point (pI)

49.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	220 - 274	2.7e-09	Leucine rich repeat
LRR_8	PF13855	264 - 320	9.7e-09	Leucine rich repeat
LRR_14	PF23598	267 - 316	7.1e-06	Leucine-rich repeat region
LRR_8	PF13855	308 - 367	2.2e-07	Leucine rich repeat
LRR_14	PF23598	319 - 386	3.8e-07	Leucine-rich repeat region
LRR_14	PF23598	375 - 435	2.3e-07	Leucine-rich repeat region
LRR_8	PF13855	379 - 438	2.2e-11	Leucine rich repeat
LRR_4	PF12799	403 - 438	4.2e-07	Leucine Rich repeats (2 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11330 AT5G05850
fragaria_vesca	FvH4_2g00400 FvH4_5g35210 FvH4_5g35210 FvH4_5g35210
malus_domestica	MD05G1037800.v1.1 MD10G1041600.v1.1
prunus_persica	Prupe.8G003900_v2.0.a1
pyrus_communis	pycom05g02800 pycom10g02870
rosa_chinensis	RchiOBHm_Chr6g0249641 RchiOBHm_Chr7g0236341
rosa_laevigata	RLG00000001082 RLG00000015555 RLG00000018499 RLG00000018876 RLG00000019048
rosa_multiflora	Rmu_co8191622.1_g000001 Rmu_co8329307.1_g000001 Rmu_sc0000704.1_g000050
rosa_roxburghii	Rroxscaffold_1G00019180 Rroxscaffold_3G00225210
rosa_rugosa	Rorug03G0338400 Rorug04G0195800 Rorug05G0494200 Rorug07G0296200 Rorug07G0296300 Rorug07G0296400 Rorug07G0296500 Rorug07G0296500 Rorug07G0296500 Rorug07G0296600 Rorug07G0296700 Rorug07G0296700
rosa_samantha	Rh1AG198700 Rh2AG167200 Rh2AG422000 Rh2BG174100 Rh2DG172600 Rh2DG587800 Rh3AG279400 Rh4AG190400 Rh5BG446700 Rh5DG459100 Rh6AG004200 Rh6AG382900 Rh6BG005900 Rh6CG003200 Rh6CG396200 Rh6DG003000 Rh7AG451000 Rh7BG422700 Rh7CG470600 Rh7DG440400
rosa_wichuraiana	Rw0G019890 Rw6G000460 Rw7G037490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	203, 572
AatII	GACGTC	2 cut(s)	240, 387
Acc36I	ACCTGC	1 cut(s)	912
AccB7I	CCANNNNNTGG	1 cut(s)	1380
AccBSI	CCGCTC	2 cut(s)	252, 335
AccI	GTMKAC	3 cut(s)	81, 297, 387
AccII	CGCG	4 cut(s)	225, 423, 438, 462
AclWI	GGATC	5 cut(s)	12, 60, 73, 668, 719
AcoI	YGGCCR	6 cut(s)	121, 673, 1123, 1131, 1267, 1371
AcsI	RAATTY	1 cut(s)	856
AcuI	CTGAAG	1 cut(s)	986
AcyI	GRCGYC	5 cut(s)	237, 300, 384, 441, 525
AfaI	GTAC	1 cut(s)	1428
AfiI	CCNNNNNNNGG	4 cut(s)	403, 534, 1114, 1380
AgsI	TTSAA	6 cut(s)	110, 862, 952, 1093, 1340, 1424
AhdI	GACNNNNNGTC	1 cut(s)	100
AjnI	CCWGG	2 cut(s)	753, 1469
Alw21I	GWGCWC	2 cut(s)	495, 753
Alw26I	GTCTC	6 cut(s)	235, 818, 880, 1071, 1515, 1521
AlwI	GGATC	5 cut(s)	12, 60, 73, 668, 719
AlwNI	CAGNNNCTG	1 cut(s)	1445
Ama87I	CYCGRG	2 cut(s)	98, 350
ApaI	GGGCCC	1 cut(s)	409
ApeKI	GCWGC	7 cut(s)	631, 850, 893, 1183, 1461, 1482, 1546
ApoI	RAATTY	1 cut(s)	856
AspLEI	GCGC	5 cut(s)	227, 423, 462, 652, 1074
AspS9I	GGNCC	5 cut(s)	46, 355, 405, 406, 1105
AsuHPI	GGTGA	4 cut(s)	532, 586, 706, 1211
AvaI	CYCGRG	2 cut(s)	98, 350
AvaII	GGWCC	2 cut(s)	46, 355
BaeGI	GKGCMC	1 cut(s)	409
BalI	TGGCCA	3 cut(s)	123, 1133, 1373
BamHI	GGATCC	2 cut(s)	4, 65
BanII	GRGCYC	3 cut(s)	409, 495, 753
BauI	CACGAG	1 cut(s)	287
BbsI	GAAGAC	1 cut(s)	801
Bbv12I	GWGCWC	2 cut(s)	495, 753
BbvCI	CCTCAGC	1 cut(s)	1061
BbvI	GCAGC	6 cut(s)	643, 837, 880, 1170, 1473, 1494
BccI	CCATC	3 cut(s)	35, 113, 1443
BceAI	ACGGC	2 cut(s)	212, 278
BcgI	CGANNNNNNTGC	2 cut(s)	634, 668
BciT130I	CCWGG	2 cut(s)	755, 1471
BclI	TGATCA	2 cut(s)	135, 1540
BcoDI	GTCTC	6 cut(s)	235, 818, 880, 1071, 1515, 1521
BfmI	CTRYAG	1 cut(s)	629
BfuAI	ACCTGC	1 cut(s)	912
BglI	GCCNNNNNGGC	1 cut(s)	308
BglII	AGATCT	1 cut(s)	1517
Bme1390I	CCNGG	2 cut(s)	755, 1471
Bme18I	GGWCC	2 cut(s)	46, 355
BmeRI	GACNNNNNGTC	1 cut(s)	100
BmeT110I	CYCGRG	2 cut(s)	98, 350
BmgT120I	GGNCC	5 cut(s)	46, 355, 405, 406, 1105
BmiI	GGNNCC	5 cut(s)	6, 67, 407, 582, 1106
BmrFI	CCNGG	2 cut(s)	755, 1471
BmrI	ACTGGG	1 cut(s)	124
BmsI	GCATC	2 cut(s)	171, 1072
BmuI	ACTGGG	1 cut(s)	124
BpiI	GAAGAC	1 cut(s)	801
BpmI	CTGGAG	2 cut(s)	464, 737
Bpu10I	CCTNAGC	1 cut(s)	1061
BpuEI	CTTGAG	2 cut(s)	503, 1199
BsaHI	GRCGYC	5 cut(s)	237, 300, 384, 441, 525
BsaI	GGTCTC	2 cut(s)	1071, 1521
BsaJI	CCNNGG	5 cut(s)	268, 306, 528, 561, 1077
BsaWI	WCCGGW	3 cut(s)	657, 684, 716
BsaXI	ACNNNNNCTCC	2 cut(s)	74, 104
Bsc4I	CCNNNNNNNGG	4 cut(s)	403, 534, 1114, 1380
Bse118I	RCCGGY	1 cut(s)	589
Bse1I	ACTGG	5 cut(s)	130, 397, 1119, 1398, 1450
Bse3DI	GCAATG	1 cut(s)	916
BseBI	CCWGG	2 cut(s)	755, 1471
BseDI	CCNNGG	5 cut(s)	268, 306, 528, 561, 1077
BseGI	GGATG	6 cut(s)	27, 152, 158, 946, 1087, 1454
BseLI	CCNNNNNNNGG	4 cut(s)	403, 534, 1114, 1380
BseMI	GCAATG	1 cut(s)	916
BseMII	CTCAG	3 cut(s)	1052, 1170, 1243
BseNI	ACTGG	5 cut(s)	130, 397, 1119, 1398, 1450
BseRI	GAGGAG	3 cut(s)	161, 593, 626
BseSI	GKGCMC	1 cut(s)	409
BseX3I	CGGCCG	1 cut(s)	673
BseXI	GCAGC	6 cut(s)	643, 837, 880, 1170, 1473, 1494
Bsh1236I	CGCG	4 cut(s)	225, 423, 438, 462
Bsh1285I	CGRYCG	4 cut(s)	277, 391, 658, 676
BsiEI	CGRYCG	4 cut(s)	277, 391, 658, 676
BsiHKAI	GWGCWC	2 cut(s)	495, 753
BsiHKCI	CYCGRG	2 cut(s)	98, 350
BsiSI	CCGG	8 cut(s)	590, 642, 658, 672, 685, 695, 717, 879
BslFI	GGGAC	2 cut(s)	58, 264
BslI	CCNNNNNNNGG	4 cut(s)	403, 534, 1114, 1380
BsmAI	GTCTC	6 cut(s)	235, 818, 880, 1071, 1515, 1521
BsmBI	CGTCTC	1 cut(s)	235
BsmFI	GGGAC	2 cut(s)	58, 264
BsmI	GAATGC	1 cut(s)	624
Bso31I	GGTCTC	2 cut(s)	1071, 1521
BsoBI	CYCGRG	2 cut(s)	98, 350
Bsp120I	GGGCCC	1 cut(s)	405
Bsp1286I	GDGCHC	3 cut(s)	409, 495, 753
Bsp143I	GATC	9 cut(s)	4, 65, 135, 660, 711, 1201, 1225, 1517, 1540
BspCNI	CTCAG	3 cut(s)	1053, 1171, 1242
BspFNI	CGCG	4 cut(s)	225, 423, 438, 462
BspHI	TCATGA	1 cut(s)	607
BspLI	GGNNCC	5 cut(s)	6, 67, 407, 582, 1106
BspMAI	CTGCAG	1 cut(s)	633
BspMI	ACCTGC	1 cut(s)	912
BspPI	GGATC	5 cut(s)	12, 60, 73, 668, 719
BspQI	GCTCTTC	1 cut(s)	903
BspTNI	GGTCTC	2 cut(s)	1071, 1521
BsrBI	CCGCTC	2 cut(s)	252, 335
BsrDI	GCAATG	1 cut(s)	916
BsrFI	RCCGGY	1 cut(s)	589
BsrI	ACTGG	5 cut(s)	130, 397, 1119, 1398, 1450
BssAI	RCCGGY	1 cut(s)	589
BssECI	CCNNGG	5 cut(s)	268, 306, 528, 561, 1077
BssMI	GATC	9 cut(s)	4, 65, 135, 660, 711, 1201, 1225, 1517, 1540
BssNI	GRCGYC	5 cut(s)	237, 300, 384, 441, 525
BssSI	CACGAG	1 cut(s)	287
BssT1I	CCWWGG	2 cut(s)	306, 1077
Bst2BI	CACGAG	1 cut(s)	287
Bst2UI	CCWGG	2 cut(s)	755, 1471
Bst4CI	ACNGT	2 cut(s)	61, 278
Bst6I	CTCTTC	1 cut(s)	903
BstACI	GRCGYC	5 cut(s)	237, 300, 384, 441, 525
BstDEI	CTNAG	3 cut(s)	1061, 1179, 1229
BstEII	GGTNACC	1 cut(s)	592
BstF5I	GGATG	6 cut(s)	27, 152, 158, 946, 1087, 1454
BstFNI	CGCG	4 cut(s)	225, 423, 438, 462
BstHHI	GCGC	5 cut(s)	227, 423, 462, 652, 1074
BstKTI	GATC	9 cut(s)	7, 68, 138, 663, 714, 1204, 1228, 1520, 1543
BstMAI	GTCTC	6 cut(s)	235, 818, 880, 1071, 1515, 1521
BstMBI	GATC	9 cut(s)	4, 65, 135, 660, 711, 1201, 1225, 1517, 1540
BstMCI	CGRYCG	4 cut(s)	277, 391, 658, 676
BstMWI	GCNNNNNNNGC	8 cut(s)	299, 308, 317, 413, 490, 687, 796, 1015
BstNI	CCWGG	2 cut(s)	755, 1471
BstNSI	RCATGY	1 cut(s)	1420
BstPI	GGTNACC	1 cut(s)	592
BstSCI	CCNGG	2 cut(s)	753, 1469
BstSFI	CTRYAG	1 cut(s)	629
BstSLI	GKGCMC	1 cut(s)	409
BstUI	CGCG	4 cut(s)	225, 423, 438, 462
BstV1I	GCAGC	6 cut(s)	643, 837, 880, 1170, 1473, 1494
BstV2I	GAAGAC	1 cut(s)	801
BstX2I	RGATCY	3 cut(s)	4, 65, 1517
BstXI	CCANNNNNNTGG	1 cut(s)	820
BstYI	RGATCY	3 cut(s)	4, 65, 1517
BstZI	CGGCCG	1 cut(s)	673
BtgZI	GCGATG	1 cut(s)	193
BtsCI	GGATG	6 cut(s)	27, 152, 158, 946, 1087, 1454
BtsI	GCAGTG	2 cut(s)	645, 827
BtsIMutI	CAGTG	4 cut(s)	404, 645, 827, 1112
BveI	ACCTGC	1 cut(s)	912
CaiI	CAGNNNCTG	1 cut(s)	1445
CciI	TCATGA	1 cut(s)	607
CfoI	GCGC	5 cut(s)	227, 423, 462, 652, 1074
Cfr10I	RCCGGY	1 cut(s)	589
Cfr13I	GGNCC	5 cut(s)	46, 355, 405, 406, 1105
CseI	GACGC	4 cut(s)	308, 449, 533, 1361
Csp6I	GTAC	1 cut(s)	1427
CviAII	CATG	6 cut(s)	43, 217, 608, 1015, 1247, 1417
CviQI	GTAC	1 cut(s)	1427
DdeI	CTNAG	3 cut(s)	1061, 1179, 1229
DpnI	GATC	9 cut(s)	6, 67, 137, 662, 713, 1203, 1227, 1519, 1542
DpnII	GATC	9 cut(s)	4, 65, 135, 660, 711, 1201, 1225, 1517, 1540
DrdI	GACNNNNNNGTC	2 cut(s)	203, 572
DriI	GACNNNNNGTC	1 cut(s)	100
DseDI	GACNNNNNNGTC	2 cut(s)	203, 572
EaeI	YGGCCR	6 cut(s)	121, 673, 1123, 1131, 1267, 1371
EagI	CGGCCG	1 cut(s)	673
Eam1104I	CTCTTC	1 cut(s)	903
Eam1105I	GACNNNNNGTC	1 cut(s)	100
EarI	CTCTTC	1 cut(s)	903
EciI	GGCGGA	1 cut(s)	547
Ecl136II	GAGCTC	2 cut(s)	493, 751
EclXI	CGGCCG	1 cut(s)	673
Eco130I	CCWWGG	2 cut(s)	306, 1077
Eco24I	GRGCYC	3 cut(s)	409, 495, 753
Eco31I	GGTCTC	2 cut(s)	1071, 1521
Eco32I	GATATC	1 cut(s)	1505
Eco47I	GGWCC	2 cut(s)	46, 355
Eco52I	CGGCCG	1 cut(s)	673
Eco53kI	GAGCTC	2 cut(s)	493, 751
Eco57I	CTGAAG	1 cut(s)	986
Eco88I	CYCGRG	2 cut(s)	98, 350
Eco91I	GGTNACC	1 cut(s)	592
EcoICRI	GAGCTC	2 cut(s)	493, 751
EcoO109I	RGGNCCY	2 cut(s)	355, 1105
EcoO65I	GGTNACC	1 cut(s)	592
EcoRII	CCWGG	2 cut(s)	753, 1469
EcoRV	GATATC	1 cut(s)	1505
EcoT14I	CCWWGG	2 cut(s)	306, 1077
EcoT38I	GRGCYC	3 cut(s)	409, 495, 753
ErhI	CCWWGG	2 cut(s)	306, 1077
Esp3I	CGTCTC	1 cut(s)	235
FaeI	CATG	6 cut(s)	46, 220, 611, 1018, 1250, 1420
FaqI	GGGAC	2 cut(s)	58, 264
FatI	CATG	6 cut(s)	42, 216, 607, 1014, 1246, 1416
FauI	CCCGC	4 cut(s)	230, 257, 380, 396
FbaI	TGATCA	2 cut(s)	135, 1540
FblI	GTMKAC	3 cut(s)	81, 297, 387
FokI	GGATG	6 cut(s)	14, 139, 145, 953, 1094, 1461
FriOI	GRGCYC	3 cut(s)	409, 495, 753
GlaI	GCGC	5 cut(s)	226, 422, 461, 651, 1073
GsuI	CTGGAG	2 cut(s)	464, 737
HapII	CCGG	8 cut(s)	590, 642, 658, 672, 685, 695, 717, 879
HgaI	GACGC	4 cut(s)	308, 449, 533, 1361
HhaI	GCGC	5 cut(s)	227, 423, 462, 652, 1074
Hin1I	GRCGYC	5 cut(s)	237, 300, 384, 441, 525
Hin1II	CATG	6 cut(s)	46, 220, 611, 1018, 1250, 1420
Hin6I	GCGC	5 cut(s)	225, 421, 460, 650, 1072
HinP1I	GCGC	5 cut(s)	225, 421, 460, 650, 1072
HincII	GTYRAC	6 cut(s)	82, 298, 388, 1351, 1455, 1476
HindII	GTYRAC	6 cut(s)	82, 298, 388, 1351, 1455, 1476
HindIII	AAGCTT	2 cut(s)	512, 1007
HinfI	GANTC	5 cut(s)	101, 329, 570, 905, 1243
HpaII	CCGG	8 cut(s)	590, 642, 658, 672, 685, 695, 717, 879
HphI	GGTGA	4 cut(s)	532, 586, 706, 1211
Hpy166II	GTNNAC	6 cut(s)	82, 298, 388, 1351, 1455, 1476
Hpy188I	TCNGA	9 cut(s)	9, 94, 196, 235, 382, 870, 1005, 1149, 1242
Hpy188III	TCNNGA	7 cut(s)	281, 608, 764, 777, 902, 1500, 1538
Hpy8I	GTNNAC	6 cut(s)	82, 298, 388, 1351, 1455, 1476
HpyAV	CCTTC	4 cut(s)	445, 856, 1049, 1118
HpyCH4III	ACNGT	2 cut(s)	61, 278
HpyCH4IV	ACGT	4 cut(s)	39, 237, 384, 1332
HpyCH4V	TGCA	5 cut(s)	468, 631, 853, 921, 1018
HpyF10VI	GCNNNNNNNGC	8 cut(s)	299, 308, 317, 413, 490, 687, 796, 1015
HpyF3I	CTNAG	3 cut(s)	1061, 1179, 1229
HpySE526I	ACGT	4 cut(s)	39, 237, 384, 1332
Hsp92I	GRCGYC	5 cut(s)	237, 300, 384, 441, 525
Hsp92II	CATG	6 cut(s)	46, 220, 611, 1018, 1250, 1420
HspAI	GCGC	5 cut(s)	225, 421, 460, 650, 1072
Ksp22I	TGATCA	2 cut(s)	135, 1540
Kzo9I	GATC	9 cut(s)	4, 65, 135, 660, 711, 1201, 1225, 1517, 1540
LguI	GCTCTTC	1 cut(s)	903
LmnI	GCTCC	6 cut(s)	257, 498, 560, 580, 756, 1079
Lsp1109I	GCAGC	6 cut(s)	643, 837, 880, 1170, 1473, 1494
LweI	GCATC	2 cut(s)	171, 1072
MaeII	ACGT	4 cut(s)	39, 237, 384, 1332
MaeIII	GTNAC	2 cut(s)	592, 1232
MalI	GATC	9 cut(s)	6, 67, 137, 662, 713, 1203, 1227, 1519, 1542
MbiI	CCGCTC	2 cut(s)	252, 335
MboI	GATC	9 cut(s)	4, 65, 135, 660, 711, 1201, 1225, 1517, 1540
MboII	GAAGA	6 cut(s)	801, 890, 992, 1412, 1415, 1445
MflI	RGATCY	3 cut(s)	4, 65, 1517
MhlI	GDGCHC	3 cut(s)	409, 495, 753
MlsI	TGGCCA	3 cut(s)	123, 1133, 1373
MluCI	AATT	3 cut(s)	856, 1019, 1279
MluNI	TGGCCA	3 cut(s)	123, 1133, 1373
MlyI	GAGTC	3 cut(s)	110, 338, 899
MmeI	TCCRAC	9 cut(s)	42, 117, 219, 258, 405, 765, 801, 918, 1365
Mox20I	TGGCCA	3 cut(s)	123, 1133, 1373
MscI	TGGCCA	3 cut(s)	123, 1133, 1373
MseI	TTAA	3 cut(s)	801, 1022, 1293
MslI	CAYNNNNRTG	2 cut(s)	732, 1092
Msp20I	TGGCCA	3 cut(s)	123, 1133, 1373
MspI	CCGG	8 cut(s)	590, 642, 658, 672, 685, 695, 717, 879
MspR9I	CCNGG	2 cut(s)	755, 1471
Mva1269I	GAATGC	1 cut(s)	624
MvaI	CCWGG	2 cut(s)	755, 1471
MvnI	CGCG	4 cut(s)	225, 423, 438, 462
MwoI	GCNNNNNNNGC	8 cut(s)	299, 308, 317, 413, 490, 687, 796, 1015
NdeII	GATC	9 cut(s)	4, 65, 135, 660, 711, 1201, 1225, 1517, 1540
NlaIII	CATG	6 cut(s)	46, 220, 611, 1018, 1250, 1420
NlaIV	GGNNCC	5 cut(s)	6, 67, 407, 582, 1106
NmeAIII	GCCGAG	5 cut(s)	249, 442, 472, 553, 586
NmuCI	GTSAC	1 cut(s)	592
NspI	RCATGY	1 cut(s)	1420
PaeI	GCATGC	1 cut(s)	1420
PaeR7I	CTCGAG	2 cut(s)	98, 350
PagI	TCATGA	1 cut(s)	607
PciSI	GCTCTTC	1 cut(s)	903
PcsI	WCGNNNNNNNCGW	8 cut(s)	90, 270, 294, 324, 357, 420, 504, 573
PctI	GAATGC	1 cut(s)	624
PfeI	GAWTC	2 cut(s)	570, 1243
PflFI	GACNNNGTC	2 cut(s)	359, 1355
PflMI	CCANNNNNTGG	1 cut(s)	1380
PleI	GAGTC	3 cut(s)	109, 337, 899
PpsI	GAGTC	3 cut(s)	109, 337, 899
PpuMI	RGGWCCY	1 cut(s)	355
Psp124BI	GAGCTC	2 cut(s)	495, 753
Psp5II	RGGWCCY	1 cut(s)	355
Psp6I	CCWGG	2 cut(s)	753, 1469
PspEI	GGTNACC	1 cut(s)	592
PspGI	CCWGG	2 cut(s)	753, 1469
PspN4I	GGNNCC	5 cut(s)	6, 67, 407, 582, 1106
PspOMI	GGGCCC	1 cut(s)	405
PspPI	GGNCC	5 cut(s)	46, 355, 405, 406, 1105
PspPPI	RGGWCCY	1 cut(s)	355
PspXI	VCTCGAGB	2 cut(s)	98, 350
PstI	CTGCAG	1 cut(s)	633
PstNI	CAGNNNCTG	1 cut(s)	1445
PsuI	RGATCY	3 cut(s)	4, 65, 1517
PsyI	GACNNNGTC	2 cut(s)	359, 1355
RsaI	GTAC	1 cut(s)	1428
RsaNI	GTAC	1 cut(s)	1427
RseI	CAYNNNNRTG	2 cut(s)	732, 1092
SacI	GAGCTC	2 cut(s)	495, 753
SalI	GTCGAC	3 cut(s)	80, 296, 386
SapI	GCTCTTC	1 cut(s)	903
SaqAI	TTAA	3 cut(s)	801, 1022, 1293
Sau3AI	GATC	9 cut(s)	4, 65, 135, 660, 711, 1201, 1225, 1517, 1540
Sau96I	GGNCC	5 cut(s)	46, 355, 405, 406, 1105
SchI	GAGTC	3 cut(s)	110, 338, 899
ScrFI	CCNGG	2 cut(s)	755, 1471
SduI	GDGCHC	3 cut(s)	409, 495, 753
SfaNI	GCATC	2 cut(s)	171, 1072
SfcI	CTRYAG	1 cut(s)	629
Sfr274I	CTCGAG	2 cut(s)	98, 350
SgrDI	CGTCGACG	2 cut(s)	80, 296
SinI	GGWCC	2 cut(s)	46, 355
SlaI	CTCGAG	2 cut(s)	98, 350
SmiMI	CAYNNNNRTG	2 cut(s)	732, 1092
SmlI	CTYRAG	4 cut(s)	98, 350, 518, 1214
SmoI	CTYRAG	4 cut(s)	98, 350, 518, 1214
SphI	GCATGC	1 cut(s)	1420
Sse9I	AATT	3 cut(s)	856, 1019, 1279
SstI	GAGCTC	2 cut(s)	495, 753
StyD4I	CCNGG	2 cut(s)	753, 1469
StyI	CCWWGG	2 cut(s)	306, 1077
TaaI	ACNGT	2 cut(s)	61, 278
TaiI	ACGT	4 cut(s)	42, 240, 387, 1335
TasI	AATT	3 cut(s)	856, 1019, 1279
TatI	WGTACW	1 cut(s)	1426
TauI	GCSGC	9 cut(s)	215, 305, 438, 446, 586, 589, 678, 681, 1272
TfiI	GAWTC	2 cut(s)	570, 1243
Tru1I	TTAA	3 cut(s)	801, 1022, 1293
Tru9I	TTAA	3 cut(s)	801, 1022, 1293
TscAI	CASTG	4 cut(s)	404, 652, 834, 1119
TseFI	GTSAC	1 cut(s)	592
TseI	GCWGC	7 cut(s)	631, 850, 893, 1183, 1461, 1482, 1546
Tsp45I	GTSAC	1 cut(s)	592
TspDTI	ATGAA	2 cut(s)	596, 1235
TspGWI	ACGGA	4 cut(s)	244, 582, 1022, 1317
TspRI	CASTG	4 cut(s)	404, 652, 834, 1119
Tth111I	GACNNNGTC	2 cut(s)	359, 1355
Van91I	CCANNNNNTGG	1 cut(s)	1380
VpaK11BI	GGWCC	2 cut(s)	46, 355
XapI	RAATTY	1 cut(s)	856
XceI	RCATGY	1 cut(s)	1420
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1294, 1381
XhoI	CTCGAG	2 cut(s)	98, 350
XmiI	GTMKAC	3 cut(s)	81, 297, 387
ZraI	GACGTC	2 cut(s)	238, 385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.