Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001144

Physical Location & Seq

Genomic Coordinates Forward (+)

29155303 .. 29158719

Gene Structure 3417 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0296300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2940 bp

ATGGCACACTCATGGAGTCTCACTTACGCATTCCCATCTCGTCTGTCAACTCGATCCATCATGCCATTACCCAAAAACCACCACCTCCATCTCTACCTCCTCTTCTTCCTCTTCCTCCTCTCCAACGCCGCCGCAGCAGACGAGCTTCAAATCCTACTAAAACTCAAATCCTCCCTCCAAGACTCCAACGCCCAACTCTTCGCCACATGGGACTCCACCGCCAATTCGTTTTGCACCTTCACCGGAATCACCTGCAACAACGTCGGTTCGGTTCGAGAAATCGAACTTTCGAACCAGAAGCTGTCGGGGTCTCTTCCGTTGGACTCGATATGCCAACTTCCATCATTAGAAAAGCTCGCTTTCGGGTCCAATTTCCTGCACGGGACAATCACGGAGGACTTGAGAAACTGTACGAATTTGAAGTACCTGGATTTGGGGAACAACTTGTTCGCGGGTTCATTCCCTGACATATCTTCCTTGTCCCAACTGGAGCATCTTCATTTAAACCACAGCGTGTTTTCGGGGATTTTCCCGTGGACTTGCCTCACCAACATGACTGGTCTGATTCGTTTGAGCTTGGGTGACAACCCGTTTGATCCGAGCCCGTTTCCAAAGGAAGTAGTAACTCTTAAGAAGCTCGAGTGGCTCTACTTAACAAACTGCAGCATCCAAGGAACGATACCAAGCGAAATCGGGAACTTGGTCGAGCTTATCAACCTGGAGCTGTCCGGTAACAACATGACCGGAGAAATTCCGGCCGAGACTGGACAGCTCACCAAGCTCTGGCAGCTGGAGCTCTACGCCAACAGGTTCACCGGAAAACTTCCTTTCGGGCTAAGAAACCTCATCAATCTCGAGAACTTCGACGCTTCCACGAATTTTCTAGAAGGCGATTTGAACGAGTTGGGGTTTCTGACCAATTTGGTTTCTCTGCAGCTGTCTAAGAACAATTTTTCCGGCCAAGTACCGGAAGAATTCAGCGAGTTCAAGAAGCTTGTGAATCTGTGTTTGTACGCTAACAAGCTGACCGGTCCTCTGCCTCAGAAATTGGGGTCTTGGTCGAAGATGGTAGTCATCGATGTGTCGGAGAATTTCTTGACCGGGACTATTCCGCCGGACATGTGCAACAAAGGGACGATGAAGAAGCTGCTCATGCTTCAGAACAAGTTGACCGGCGAAATTCCGGCAAACTACGCGAAGTGCACGACGCTGACCCGGTTCAGGGTCAACAACAACTCCCTCTCCGGTGTAGTTCCGGCTGGACTTTGGGGATTGCCGAATGTGGCAATCATTGACATCACTTTGAATCAAATTGAAGGTCCGATTACTTCCGATATCGGAAACGCCAAGAAGCTTGCGCAGTTGTTTGTGAGTTACAATCGATTATCTGGTGAATTACCGGACGAGCTTTCGAAGTCAACTTCGTTGGTTTCGGTTGTGTTGAATAACAATCAGTTTTCCGGTAAGATTCCGGCGAAGATAGGGGACTTGAAGCAATTGAGTACTCTGTATTTACAGAGCAACTTGTTGTCTTCTTCAATTCCCAAGTCATTAGGAAGCTGTAGTTTCCTGAGTGACTTGAACATGGCAAACAACTCGCTTTCCGGTAAAATCCCGTCATCTTTGGGCTCTTTGCCTACCTTGAATTCTTTGGATTTGTCTCACAATCAACTCTCCGGTAAAATCCCGGAAAGTCTGGCATCTCTGAGACTAAGAATGCTTGATCTTTCGCACAACAGACTGACCGGTGCCGTACCGGAATCTCTCTCGATTACAGCCTACAACGGCAGCCTTTCCGGTAACCCGGGTCTCTGCAGCATGGACATCACCTACTTCCCACGGTGCTCGCCGGAAAAGGAAATGTCCAACGATGTCAGGACACTCATTATTTGCTTCTCAGTGGGTACAGCAATATTTTTTGTTTCACTCATTTGCTTCTTGCTCTTAAAGAGGAAGGAGAAAGACCAAGACCGTTCATTGAAGGAACAATCTTGGGATGTAAAGTCTTTCCATGTAATAACCTTCAGTGAGGATGAGATTCTTGATTCCCTTACTCAAGAGAATCTAATTGGAAATGGAGGTTCTGGAGATGTCTACAAAGTGTCACTAGCCAATGGCAAAAAACTCGCCGTGAAGCACATATGGAACACTGATCCAAGCGGCCGGAAAATGTTCAAGAGCACCACACCGATGCCAGGGAGACGGGGCAGTGGTAGTTCGAAATCGAAGGAATTTGATGCTGAGGTGCAGACGTTGAGCTCAATAAGGCATGTGAATGTGGTGAAGCTGTTCTGCAGCATTACTAGTGAGGACTCGAGCCTTTTGGTCTACGAGTACTTACCGAATGGAAGCTTGTGGGATCGGCTGCACATGTGTGAGAAAATGAAGCTTGATTGGGACGCAAGGTATGAGATTGGAATCGGAGCAGCCAAAGGGTTGGAGTATCTGCACCATGGCTGTGAGAGGCTAGTGATTCATAGAGATGTCAAGTCCAGTAACATTTTGTTAGACGAGCTTTTGAAGCCCCGGATTGCGGATTTTGGGCTCGCCAAGATGGTTCAGCCTAATGCAATCAAGGACTCGACTCATGTTGTTGCTGGAACACACGGTTACATAGCTCCTGAATATGGTTACACCTACAAGGTGAATGAGAAGAGCGATGTGTATAGCTTCGGTGTAGTACTAATGGAGCTAGTGACCGGGAAAAAACCGATAGATCCATCATTTGGGGACAACAAGGACATAGTGAACTGGATATGTGGCAACCTGAAGGGTAGAGAGAGTGTGTTAGGTGTGGTGGACTCATACATTCCTGAGGCATATAGAGAAGAGGCTATCAAGGTATTGAGAATTGCAATTCTATGCACAGCTAGGCTTCCAGAGCTAAGACCTTCCATGAGAAGTGTCGTTCAAATGCTTGAAGAAGCTCGGAGCCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005912 GO:0006810 GO:0007043 GO:0007154 GO:0007163 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016323 GO:0022607 GO:0023052 GO:0030011 GO:0030029 GO:0030054 GO:0032501 GO:0032502 GO:0033036 GO:0033043 GO:0034329 GO:0034330 GO:0035088 GO:0035090 GO:0035239 GO:0035295 GO:0042886 GO:0044085 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045108 GO:0045184 GO:0045197 GO:0045199 GO:0045216 GO:0048229 GO:0048513 GO:0048546 GO:0048557 GO:0048562 GO:0048565 GO:0048566 GO:0048568 GO:0048598 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051234 GO:0051493 GO:0051716 GO:0055046 GO:0055123 GO:0061245 GO:0065007 GO:0070161 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0098590

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8

Protein Analysis

979

Amino Acids

108.18

Weight (kDa)

6.7

Isoelectric Point (pI)

33.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	46 - 86	3.5e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	205 - 326	3.5e-11	Leucine-rich repeat region
LRR_8	PF13855	524 - 581	1.9e-07	Leucine rich repeat
Pkinase	PF00069	686 - 971	4.6e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	735 - 973	1.6e-35	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11330 AT5G05850
fragaria_vesca	FvH4_2g00400 FvH4_5g35210 FvH4_5g35210 FvH4_5g35210
malus_domestica	MD05G1037800.v1.1 MD10G1041600.v1.1
prunus_persica	Prupe.8G003900_v2.0.a1
pyrus_communis	pycom05g02800 pycom10g02870
rosa_chinensis	RchiOBHm_Chr6g0249641 RchiOBHm_Chr7g0236341
rosa_laevigata	RLG00000001082 RLG00000015555 RLG00000018499 RLG00000018876 RLG00000019048
rosa_multiflora	Rmu_co8191622.1_g000001 Rmu_co8329307.1_g000001 Rmu_sc0000704.1_g000050
rosa_roxburghii	Rroxscaffold_1G00019180 Rroxscaffold_3G00225210
rosa_rugosa	Rorug03G0338400 Rorug04G0195800 Rorug05G0494200 Rorug07G0296200 Rorug07G0296300 Rorug07G0296400 Rorug07G0296500 Rorug07G0296500 Rorug07G0296500 Rorug07G0296600 Rorug07G0296700 Rorug07G0296700
rosa_samantha	Rh1AG198700 Rh2AG167200 Rh2AG422000 Rh2BG174100 Rh2DG172600 Rh2DG587800 Rh3AG279400 Rh4AG190400 Rh5BG446700 Rh5DG459100 Rh6AG004200 Rh6AG382900 Rh6BG005900 Rh6CG003200 Rh6CG396200 Rh6DG003000 Rh7AG451000 Rh7BG422700 Rh7CG470600 Rh7DG440400
rosa_wichuraiana	Rw0G019890 Rw6G000460 Rw7G037490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	260
Acc16I	TGCGCA	1 cut(s)	1359
Acc36I	ACCTGC	1 cut(s)	260
AccB1I	GGYRCC	1 cut(s)	1748
AccB7I	CCANNNNNTGG	2 cut(s)	783, 2726
AccI	GTMKAC	2 cut(s)	2094, 2328
AccII	CGCG	2 cut(s)	452, 1196
AciI	CCGC	7 cut(s)	129, 132, 219, 452, 1112, 2160, 2534
AclWI	GGATC	5 cut(s)	48, 590, 2147, 2367, 2711
AcoI	YGGCCR	3 cut(s)	756, 958, 2161
AcsI	RAATTY	8 cut(s)	415, 750, 877, 974, 1090, 1179, 1645, 2231
AcuI	CTGAAG	3 cut(s)	1142, 2008, 2789
AdeI	CACNNNGTG	1 cut(s)	514
AfaI	GTAC	9 cut(s)	412, 425, 966, 1013, 1504, 1755, 1906, 2336, 2682
AfiI	CCNNNNNNNGG	9 cut(s)	433, 783, 967, 1221, 1222, 2195, 2533, 2627, 2726
AflII	CTTAAG	1 cut(s)	629
AflIII	ACRYGT	2 cut(s)	1119, 2370
AgeI	ACCGGT	2 cut(s)	1028, 1745
AhlI	ACTAGT	1 cut(s)	2303
AjnI	CCWGG	3 cut(s)	426, 717, 2194
AleI	CACNNNNGTG	1 cut(s)	2373
AloI	GAACNNNNNNTCC	2 cut(s)	938, 970
Alw21I	GWGCWC	5 cut(s)	798, 1205, 1847, 2183, 2261
Alw26I	GTCTC	7 cut(s)	23, 315, 755, 1665, 1702, 1814, 2194
Alw44I	GTGCAC	1 cut(s)	1201
AlwI	GGATC	5 cut(s)	48, 590, 2147, 2367, 2711
AlwNI	CAGNNNCTG	1 cut(s)	301
Ama87I	CYCGRG	4 cut(s)	638, 854, 1804, 2314
AoxI	GGCC	3 cut(s)	756, 958, 2161
ApaLI	GTGCAC	1 cut(s)	1201
ApoI	RAATTY	8 cut(s)	415, 750, 877, 974, 1090, 1179, 1645, 2231
ArsI	GACNNNNNNTTYG	4 cut(s)	575, 607, 1303, 1335
AsiGI	ACCGGT	2 cut(s)	1028, 1745
Asp700I	GAANNNNTTC	2 cut(s)	2171, 2288
AspLEI	GCGC	1 cut(s)	1360
AspS9I	GGNCC	3 cut(s)	366, 1031, 1319
AsuC2I	CCSGG	7 cut(s)	1102, 1216, 1688, 1805, 1806, 2527, 2701
AsuII	TTCGAA	3 cut(s)	290, 1412, 2219
AvaI	CYCGRG	4 cut(s)	638, 854, 1804, 2314
AvaII	GGWCC	3 cut(s)	366, 1031, 1319
AxyI	CCTNAGG	1 cut(s)	2814
BaeGI	GKGCMC	1 cut(s)	1205
BanI	GGYRCC	1 cut(s)	1748
BanII	GRGCYC	5 cut(s)	605, 798, 1631, 2261, 2547
BbsI	GAAGAC	1 cut(s)	1524
Bbv12I	GWGCWC	5 cut(s)	798, 1205, 1847, 2183, 2261
BbvCI	CCTCAGC	1 cut(s)	2241
BccI	CCATC	7 cut(s)	43, 65, 96, 349, 1060, 2548, 2728
BceAI	ACGGC	3 cut(s)	1736, 1801, 2114
BcgI	CGANNNNNNTGC	6 cut(s)	244, 278, 1578, 1612, 2107, 2141
BciT130I	CCWGG	3 cut(s)	428, 719, 2196
BcnI	CCSGG	7 cut(s)	1102, 1216, 1688, 1805, 1806, 2527, 2701
BcoDI	GTCTC	7 cut(s)	23, 315, 755, 1665, 1702, 1814, 2194
BcuI	ACTAGT	1 cut(s)	2303
BfaI	CTAG	6 cut(s)	884, 2108, 2304, 2468, 2693, 2871
BfmI	CTRYAG	5 cut(s)	661, 932, 1561, 1813, 2293
BfrI	CTTAAG	1 cut(s)	629
BfuAI	ACCTGC	1 cut(s)	260
BmcAI	AGTACT	3 cut(s)	1504, 2336, 2682
Bme18I	GGWCC	3 cut(s)	366, 1031, 1319
BmeT110I	CYCGRG	4 cut(s)	638, 854, 1804, 2314
BmgT120I	GGNCC	3 cut(s)	366, 1031, 1319
BmiI	GGNNCC	3 cut(s)	367, 1750, 2933
BmsI	GCATC	5 cut(s)	502, 675, 1709, 2181, 2227
BpiI	GAAGAC	1 cut(s)	1524
BpmI	CTGGAG	4 cut(s)	509, 740, 812, 2106
Bpu10I	CCTNAGC	1 cut(s)	2241
Bpu14I	TTCGAA	3 cut(s)	290, 1412, 2219
BpuEI	CTTGAG	2 cut(s)	421, 2040
BpuMI	CCSGG	7 cut(s)	1102, 1216, 1688, 1805, 1806, 2527, 2701
Bsa29I	ATCGAT	2 cut(s)	1077, 1381
BsaBI	GATNNNNATC	1 cut(s)	2417
BsaI	GGTCTC	2 cut(s)	315, 1814
BsaJI	CCNNGG	7 cut(s)	533, 670, 1804, 1838, 2195, 2452, 2525
BsaXI	ACNNNNNCTCC	4 cut(s)	1220, 1226, 1250, 1256
Bsc4I	CCNNNNNNNGG	9 cut(s)	433, 783, 967, 1221, 1222, 2195, 2533, 2627, 2726
Bse118I	RCCGGY	3 cut(s)	1028, 1172, 1745
Bse1I	ACTGG	5 cut(s)	492, 562, 769, 2493, 2756
Bse21I	CCTNAGG	1 cut(s)	2814
Bse8I	GATNNNNATC	1 cut(s)	2417
BseBI	CCWGG	3 cut(s)	428, 719, 2196
BseCI	ATCGAT	2 cut(s)	1077, 1381
BseDI	CCNNGG	7 cut(s)	533, 670, 1804, 1838, 2195, 2452, 2525
BseGI	GGATG	3 cut(s)	666, 2002, 2038
BseJI	GATNNNNATC	1 cut(s)	2417
BseLI	CCNNNNNNNGG	9 cut(s)	433, 783, 967, 1221, 1222, 2195, 2533, 2627, 2726
BseMII	CTCAG	6 cut(s)	1055, 1562, 1697, 1911, 2232, 2805
BseNI	ACTGG	5 cut(s)	492, 562, 769, 2493, 2756
BseRI	GAGGAG	2 cut(s)	89, 107
BseSI	GKGCMC	1 cut(s)	1205
BseX3I	CGGCCG	2 cut(s)	756, 2161
BsgI	GTGCAG	4 cut(s)	362, 2267, 2351, 2432
Bsh1236I	CGCG	2 cut(s)	452, 1196
Bsh1285I	CGRYCG	2 cut(s)	759, 2164
BshFI	GGCC	3 cut(s)	758, 960, 2163
BshNI	GGYRCC	1 cut(s)	1748
BshTI	ACCGGT	2 cut(s)	1028, 1745
BshVI	ATCGAT	2 cut(s)	1077, 1381
BsiEI	CGRYCG	2 cut(s)	759, 2164
BsiHKAI	GWGCWC	5 cut(s)	798, 1205, 1847, 2183, 2261
BsiHKCI	CYCGRG	4 cut(s)	638, 854, 1804, 2314
BslFI	GGGAC	8 cut(s)	224, 397, 466, 1117, 1147, 1499, 2411, 2744
BslI	CCNNNNNNNGG	9 cut(s)	433, 783, 967, 1221, 1222, 2195, 2533, 2627, 2726
BsmAI	GTCTC	7 cut(s)	23, 315, 755, 1665, 1702, 1814, 2194
BsmBI	CGTCTC	1 cut(s)	2194
BsmFI	GGGAC	8 cut(s)	224, 397, 466, 1117, 1147, 1499, 2411, 2744
BsmI	GAATGC	2 cut(s)	29, 1722
BsnI	GGCC	3 cut(s)	758, 960, 2163
Bso31I	GGTCTC	2 cut(s)	315, 1814
BsoBI	CYCGRG	4 cut(s)	638, 854, 1804, 2314
Bsp119I	TTCGAA	3 cut(s)	290, 1412, 2219
Bsp1286I	GDGCHC	8 cut(s)	605, 798, 1205, 1631, 1847, 2183, 2261, 2547
Bsp143I	GATC	6 cut(s)	53, 595, 1723, 2152, 2359, 2716
Bsp19I	CCATGG	1 cut(s)	2452
BspACI	CCGC	7 cut(s)	129, 132, 219, 452, 1112, 2160, 2534
BspANI	GGCC	3 cut(s)	758, 960, 2163
BspCNI	CTCAG	6 cut(s)	1054, 1563, 1698, 1910, 2233, 2806
BspDI	ATCGAT	2 cut(s)	1077, 1381
BspFNI	CGCG	2 cut(s)	452, 1196
BspLI	GGNNCC	3 cut(s)	367, 1750, 2933
BspMAI	CTGCAG	4 cut(s)	665, 936, 1817, 2297
BspMI	ACCTGC	1 cut(s)	260
BspPI	GGATC	5 cut(s)	48, 590, 2147, 2367, 2711
BspQI	GCTCTTC	1 cut(s)	2648
BspT104I	TTCGAA	3 cut(s)	290, 1412, 2219
BspT107I	GGYRCC	1 cut(s)	1748
BspTI	CTTAAG	1 cut(s)	629
BspTNI	GGTCTC	2 cut(s)	315, 1814
BsrFI	RCCGGY	3 cut(s)	1028, 1172, 1745
BsrI	ACTGG	5 cut(s)	492, 562, 769, 2493, 2756
BssAI	RCCGGY	3 cut(s)	1028, 1172, 1745
BssECI	CCNNGG	7 cut(s)	533, 670, 1804, 1838, 2195, 2452, 2525
BssMI	GATC	6 cut(s)	53, 595, 1723, 2152, 2359, 2716
BssT1I	CCWWGG	2 cut(s)	670, 2452
Bst2UI	CCWGG	3 cut(s)	428, 719, 2196
Bst4CI	ACNGT	4 cut(s)	410, 1842, 1973, 2609
Bst6I	CTCTTC	6 cut(s)	107, 116, 203, 318, 2648, 2823
BstAFI	CTTAAG	1 cut(s)	629
BstBI	TTCGAA	3 cut(s)	290, 1412, 2219
BstC8I	GCNNGC	4 cut(s)	357, 1356, 1847, 2547
BstDSI	CCRYGG	3 cut(s)	533, 1838, 2452
BstEII	GGTNACC	1 cut(s)	1799
BstF5I	GGATG	3 cut(s)	666, 2002, 2038
BstFNI	CGCG	2 cut(s)	452, 1196
BstHHI	GCGC	1 cut(s)	1360
BstKTI	GATC	6 cut(s)	56, 598, 1726, 2155, 2362, 2719
BstMAI	GTCTC	7 cut(s)	23, 315, 755, 1665, 1702, 1814, 2194
BstMBI	GATC	6 cut(s)	53, 595, 1723, 2152, 2359, 2716
BstMCI	CGRYCG	2 cut(s)	759, 2164
BstMWI	GCNNNNNNNGC	9 cut(s)	134, 643, 778, 787, 793, 1153, 1193, 2521, 2881
BstNI	CCWGG	3 cut(s)	428, 719, 2196
BstNSI	RCATGY	3 cut(s)	1123, 2273, 2374
BstPI	GGTNACC	1 cut(s)	1799
BstSFI	CTRYAG	5 cut(s)	661, 932, 1561, 1813, 2293
BstSLI	GKGCMC	1 cut(s)	1205
BstUI	CGCG	2 cut(s)	452, 1196
BstV2I	GAAGAC	1 cut(s)	1524
BstX2I	RGATCY	1 cut(s)	2716
BstXI	CCANNNNNNTGG	1 cut(s)	2437
BstYI	RGATCY	1 cut(s)	2716
BstZI	CGGCCG	2 cut(s)	756, 2161
Bsu15I	ATCGAT	2 cut(s)	1077, 1381
Bsu36I	CCTNAGG	1 cut(s)	2814
BsuRI	GGCC	3 cut(s)	758, 960, 2163
BsuTUI	ATCGAT	2 cut(s)	1077, 1381
BtgI	CCRYGG	3 cut(s)	533, 1838, 2452
BtgZI	GCGATG	1 cut(s)	2673
BtsCI	GGATG	3 cut(s)	666, 2002, 2038
BtsI	GCAGTG	1 cut(s)	2215
BtsIMutI	CAGTG	4 cut(s)	1905, 2032, 2148, 2215
BveI	ACCTGC	1 cut(s)	260
Cac8I	GCNNGC	4 cut(s)	357, 1356, 1847, 2547
CaiI	CAGNNNCTG	1 cut(s)	301
CfoI	GCGC	1 cut(s)	1360
Cfr10I	RCCGGY	3 cut(s)	1028, 1172, 1745
Cfr13I	GGNCC	3 cut(s)	366, 1031, 1319
Cfr9I	CCCGGG	1 cut(s)	1804
ClaI	ATCGAT	2 cut(s)	1077, 1381
CseI	GACGC	3 cut(s)	875, 1216, 2408
Csp6I	GTAC	9 cut(s)	411, 424, 965, 1012, 1503, 1754, 1905, 2335, 2681
CspAI	ACCGGT	2 cut(s)	1028, 1745
CviQI	GTAC	9 cut(s)	411, 424, 965, 1012, 1503, 1754, 1905, 2335, 2681
DpnI	GATC	6 cut(s)	55, 597, 1725, 2154, 2361, 2718
DpnII	GATC	6 cut(s)	53, 595, 1723, 2152, 2359, 2716
DraI	TTTAAA	1 cut(s)	504
DraIII	CACNNNGTG	1 cut(s)	514
EaeI	YGGCCR	3 cut(s)	756, 958, 2161
EagI	CGGCCG	2 cut(s)	756, 2161
Eam1104I	CTCTTC	6 cut(s)	107, 116, 203, 318, 2648, 2823
EarI	CTCTTC	6 cut(s)	107, 116, 203, 318, 2648, 2823
EciI	GGCGGA	1 cut(s)	1101
Ecl136II	GAGCTC	2 cut(s)	796, 2259
EclXI	CGGCCG	2 cut(s)	756, 2161
Eco130I	CCWWGG	2 cut(s)	670, 2452
Eco24I	GRGCYC	5 cut(s)	605, 798, 1631, 2261, 2547
Eco31I	GGTCTC	2 cut(s)	315, 1814
Eco32I	GATATC	1 cut(s)	1336
Eco47I	GGWCC	3 cut(s)	366, 1031, 1319
Eco52I	CGGCCG	2 cut(s)	756, 2161
Eco53kI	GAGCTC	2 cut(s)	796, 2259
Eco57I	CTGAAG	3 cut(s)	1142, 2008, 2789
Eco81I	CCTNAGG	1 cut(s)	2814
Eco88I	CYCGRG	4 cut(s)	638, 854, 1804, 2314
Eco91I	GGTNACC	1 cut(s)	1799
EcoICRI	GAGCTC	2 cut(s)	796, 2259
EcoO65I	GGTNACC	1 cut(s)	1799
EcoRI	GAATTC	2 cut(s)	974, 1645
EcoRII	CCWGG	3 cut(s)	426, 717, 2194
EcoRV	GATATC	1 cut(s)	1336
EcoT14I	CCWWGG	2 cut(s)	670, 2452
EcoT38I	GRGCYC	5 cut(s)	605, 798, 1631, 2261, 2547
ErhI	CCWWGG	2 cut(s)	670, 2452
Esp3I	CGTCTC	1 cut(s)	2194
FaqI	GGGAC	8 cut(s)	224, 397, 466, 1117, 1147, 1499, 2411, 2744
FauI	CCCGC	1 cut(s)	445
FauNDI	CATATG	1 cut(s)	2141
FblI	GTMKAC	2 cut(s)	2094, 2328
FokI	GGATG	3 cut(s)	653, 2009, 2045
FriOI	GRGCYC	5 cut(s)	605, 798, 1631, 2261, 2547
FspBI	CTAG	6 cut(s)	884, 2108, 2304, 2468, 2693, 2871
FspI	TGCGCA	1 cut(s)	1359
GlaI	GCGC	1 cut(s)	1359
GsuI	CTGGAG	4 cut(s)	509, 740, 812, 2106
HaeIII	GGCC	3 cut(s)	758, 960, 2163
HgaI	GACGC	3 cut(s)	875, 1216, 2408
HhaI	GCGC	1 cut(s)	1360
Hin6I	GCGC	1 cut(s)	1358
HinP1I	GCGC	1 cut(s)	1358
HincII	GTYRAC	4 cut(s)	48, 1170, 1228, 1419
HindII	GTYRAC	4 cut(s)	48, 1170, 1228, 1419
HindIII	AAGCTT	4 cut(s)	992, 1352, 2350, 2387
Hpy99I	CGWCG	3 cut(s)	266, 869, 1210
HpyAV	CCTTC	9 cut(s)	247, 881, 1310, 1948, 1975, 2032, 2221, 2764, 2901
HpyCH4III	ACNGT	4 cut(s)	410, 1842, 1973, 2609
HpyCH4IV	ACGT	2 cut(s)	261, 2252
HpyF10VI	GCNNNNNNNGC	9 cut(s)	134, 643, 778, 787, 793, 1153, 1193, 2521, 2881
HpySE526I	ACGT	2 cut(s)	261, 2252
HspAI	GCGC	1 cut(s)	1358
Kzo9I	GATC	6 cut(s)	53, 595, 1723, 2152, 2359, 2716
LguI	GCTCTTC	1 cut(s)	2648
LmnI	GCTCC	7 cut(s)	490, 721, 793, 2423, 2623, 2689, 2931
LweI	GCATC	5 cut(s)	502, 675, 1709, 2181, 2227
MaeI	CTAG	6 cut(s)	884, 2108, 2304, 2468, 2693, 2871
MaeII	ACGT	2 cut(s)	261, 2252
MalI	GATC	6 cut(s)	55, 597, 1725, 2154, 2361, 2718
MboI	GATC	6 cut(s)	53, 595, 1723, 2152, 2359, 2716
MfeI	CAATTG	1 cut(s)	1496
MflI	RGATCY	1 cut(s)	2716
MhlI	GDGCHC	8 cut(s)	605, 798, 1205, 1631, 1847, 2183, 2261, 2547
MlyI	GAGTC	8 cut(s)	25, 176, 206, 317, 2306, 2573, 2578, 2795
MmeI	TCCRAC	6 cut(s)	147, 210, 300, 1065, 1890, 2418
MroXI	GAANNNNTTC	2 cut(s)	2171, 2288
MseI	TTAA	4 cut(s)	503, 630, 653, 1946
MslI	CAYNNNNRTG	8 cut(s)	10, 551, 1079, 2189, 2274, 2373, 2457, 2481
MspA1I	CMGCKG	2 cut(s)	790, 937
MspCI	CTTAAG	1 cut(s)	629
MunI	CAATTG	1 cut(s)	1496
Mva1269I	GAATGC	2 cut(s)	29, 1722
MvaI	CCWGG	3 cut(s)	428, 719, 2196
MvnI	CGCG	2 cut(s)	452, 1196
MwoI	GCNNNNNNNGC	9 cut(s)	134, 643, 778, 787, 793, 1153, 1193, 2521, 2881
NciI	CCSGG	7 cut(s)	1102, 1216, 1688, 1805, 1806, 2527, 2701
NcoI	CCATGG	1 cut(s)	2452
NdeI	CATATG	1 cut(s)	2141
NdeII	GATC	6 cut(s)	53, 595, 1723, 2152, 2359, 2716
NlaIV	GGNNCC	3 cut(s)	367, 1750, 2933
NmeAIII	GCCGAG	1 cut(s)	784
NmuCI	GTSAC	4 cut(s)	581, 1574, 2103, 2695
NsbI	TGCGCA	1 cut(s)	1359
NspI	RCATGY	3 cut(s)	1123, 2273, 2374
NspV	TTCGAA	3 cut(s)	290, 1412, 2219
OliI	CACNNNNGTG	1 cut(s)	2373
PaeR7I	CTCGAG	3 cut(s)	638, 854, 2314
PaqCI	CACCTGC	1 cut(s)	260
PciI	ACATGT	2 cut(s)	1119, 2370
PciSI	GCTCTTC	1 cut(s)	2648
PcsI	WCGNNNNNNNCGW	1 cut(s)	861
PctI	GAATGC	2 cut(s)	29, 1722
PdmI	GAANNNNTTC	2 cut(s)	2171, 2288
PflMI	CCANNNNNTGG	2 cut(s)	783, 2726
PfoI	TCCNGGA	1 cut(s)	1686
PinAI	ACCGGT	2 cut(s)	1028, 1745
PleI	GAGTC	8 cut(s)	24, 176, 206, 317, 2306, 2573, 2578, 2795
PpsI	GAGTC	8 cut(s)	24, 176, 206, 317, 2306, 2573, 2578, 2795
PscI	ACATGT	2 cut(s)	1119, 2370
Psp124BI	GAGCTC	2 cut(s)	798, 2261
Psp6I	CCWGG	3 cut(s)	426, 717, 2194
PspEI	GGTNACC	1 cut(s)	1799
PspGI	CCWGG	3 cut(s)	426, 717, 2194
PspN4I	GGNNCC	3 cut(s)	367, 1750, 2933
PspPI	GGNCC	3 cut(s)	366, 1031, 1319
PspXI	VCTCGAGB	2 cut(s)	638, 2314
PstI	CTGCAG	4 cut(s)	665, 936, 1817, 2297
PstNI	CAGNNNCTG	1 cut(s)	301
PsuI	RGATCY	1 cut(s)	2716
PvuII	CAGCTG	2 cut(s)	790, 937
RsaI	GTAC	9 cut(s)	412, 425, 966, 1013, 1504, 1755, 1906, 2336, 2682
RsaNI	GTAC	9 cut(s)	411, 424, 965, 1012, 1503, 1754, 1905, 2335, 2681
RseI	CAYNNNNRTG	8 cut(s)	10, 551, 1079, 2189, 2274, 2373, 2457, 2481
SacI	GAGCTC	2 cut(s)	798, 2261
SapI	GCTCTTC	1 cut(s)	2648
SaqAI	TTAA	4 cut(s)	503, 630, 653, 1946
Sau3AI	GATC	6 cut(s)	53, 595, 1723, 2152, 2359, 2716
Sau96I	GGNCC	3 cut(s)	366, 1031, 1319
ScaI	AGTACT	3 cut(s)	1504, 2336, 2682
SchI	GAGTC	8 cut(s)	25, 176, 206, 317, 2306, 2573, 2578, 2795
SduI	GDGCHC	8 cut(s)	605, 798, 1205, 1631, 1847, 2183, 2261, 2547
SfaNI	GCATC	5 cut(s)	502, 675, 1709, 2181, 2227
SfcI	CTRYAG	5 cut(s)	661, 932, 1561, 1813, 2293
Sfr274I	CTCGAG	3 cut(s)	638, 854, 2314
SfuI	TTCGAA	3 cut(s)	290, 1412, 2219
SinI	GGWCC	3 cut(s)	366, 1031, 1319
SlaI	CTCGAG	3 cut(s)	638, 854, 2314
SmaI	CCCGGG	1 cut(s)	1806
SmiMI	CAYNNNNRTG	8 cut(s)	10, 551, 1079, 2189, 2274, 2373, 2457, 2481
SmlI	CTYRAG	6 cut(s)	400, 629, 638, 854, 2055, 2314
SmoI	CTYRAG	6 cut(s)	400, 629, 638, 854, 2055, 2314
SpeI	ACTAGT	1 cut(s)	2303
SsiI	CCGC	7 cut(s)	129, 132, 219, 452, 1112, 2160, 2534
SspI	AATATT	1 cut(s)	1914
SspMI	CTAG	6 cut(s)	884, 2108, 2304, 2468, 2693, 2871
SstI	GAGCTC	2 cut(s)	798, 2261
StyI	CCWWGG	2 cut(s)	670, 2452
TaaI	ACNGT	4 cut(s)	410, 1842, 1973, 2609
TaiI	ACGT	2 cut(s)	264, 2255
TatI	WGTACW	3 cut(s)	1502, 2334, 2680
TauI	GCSGC	3 cut(s)	131, 134, 2163
Tru1I	TTAA	4 cut(s)	503, 630, 653, 1946
Tru9I	TTAA	4 cut(s)	503, 630, 653, 1946
TscAI	CASTG	4 cut(s)	1905, 2032, 2155, 2215
TseFI	GTSAC	4 cut(s)	581, 1574, 2103, 2695
Tsp45I	GTSAC	4 cut(s)	581, 1574, 2103, 2695
TspDTI	ATGAA	6 cut(s)	447, 488, 1154, 1965, 2399, 2465
TspGWI	ACGGA	2 cut(s)	306, 407
TspMI	CCCGGG	1 cut(s)	1804
TspRI	CASTG	4 cut(s)	1905, 2032, 2155, 2215
Van91I	CCANNNNNTGG	2 cut(s)	783, 2726
Vha464I	CTTAAG	1 cut(s)	629
VneI	GTGCAC	1 cut(s)	1201
VpaK11BI	GGWCC	3 cut(s)	366, 1031, 1319
XapI	RAATTY	8 cut(s)	415, 750, 877, 974, 1090, 1179, 1645, 2231
XbaI	TCTAGA	1 cut(s)	883
XceI	RCATGY	3 cut(s)	1123, 2273, 2374
XhoI	CTCGAG	3 cut(s)	638, 854, 2314
XmaI	CCCGGG	1 cut(s)	1804
XmiI	GTMKAC	2 cut(s)	2094, 2328
XmnI	GAANNNNTTC	2 cut(s)	2171, 2288
XspI	CTAG	6 cut(s)	884, 2108, 2304, 2468, 2693, 2871
ZrmI	AGTACT	3 cut(s)	1504, 2336, 2682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.