Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001144

Physical Location & Seq

Genomic Coordinates Reverse (-)

61184679 .. 61188644

Gene Structure 3966 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ21179

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGGATCGGAACCGCTTCCCGATGCTCTCCTACGTCCTGGACCGGCTTCCCTCCTTGGGATCCAAGCCAACCACCCCCGTCGTCTCCGACCTCATGTCCATCCACATCGGCGATCCAGCCGCTGCTCAAAGCGAGATCGCTGACCGGATGCCCCACCTCTCCGACCCGAAAGTCATCGCCGCGATGAGACGCGCCGTGGCCGACGTGGCTCAGGCCCGATCCGTCCTCACCGAGCTCGGCGACCGACCCGATCACGAGACCGTTGACTCCGCCAAGGCCAAGCTCGCCGTCATCGATGCCGGCCGTGCTGACGTGGCCGAGACGGAGCAGCGTGAATCGGCGGGGAGAGAAGAGCAAGAGTGCATGGCGATCCTCCAGCTGGAGGAGTTGCACGTCGCCTACGAGAAGCTTCTCAAGGACGCCGAGGAGAGGCTCGTCAAGATTTACCGGTCGGCGGAGGCCGGAGTGGTGGAGGAGGAGGAGGAGAAGGTGGATGGCGTCAGCGACCAAGTCGATGAGGAGGTCGTCCGGATTCTGCAGCAGGCGTCGGCCGGGACAGGGCCGGACCGGGTCGACCTCTCGGATCGAGGCTTGCGTTTCTTGCCCGAGGAGTTTGGCCGGATCAGTGGATTGCTTCAGCTTGATCTTTCCAACAATGAGCTGCAGGCCATTCCTGATACAATAGCCGGATTAGAGAAGCTAGAAGTGCTGAATTTGTCTACCAATCTCTTGGAGTCACTGCCCGAGACGATTGGGCTGCTGCAAAATTTGAAGCTCCTCACTGTCTCCGGCAACAAGCTAACTGCCCTTCCTGACTCTATCTGCCACTGCAGGTCATTGGTGGAGTTGGATGTGAGTTTCAACCAGCTCACGTACTTGCCAACCAACATTGGTTATGAGTTGGTTAATCTACAGAAGCTTTCGGTGCAGTTGAACAAAATCCGTTCCTTTCCTACCTCTATTTGTGAGTTGAGGTCTTTGCTGTCTTTGGATGCTCACTTCAATGAGCTACGTGGTCTTCCACTAGCTTTTGGCCGATTGACTAGTCTCCAAAGTCTCAACCTTGCCAGTAATTTTACTGATCTCACTGAGCTCCCGGATACTTTTGGTGATCTAACCAATCTCAAGGAACTTGATCTCAGCAACAATCAGCTTCATGCTCTTCCAGATACATTTGGCCGCCTTGAAAATCTGGTTAAACTTAACCTGGATGGAAACCCTCTTGTGGTTCCGCCTCCTGATGTAGTTCAACAAGGTGTTGAAGCCATCAAGGTCTTTATGAGCAATAGGTGGTTAGAGTTACTGGCGGAAGAAGAAAAGAAAAGCATGCTTCAAGTACAAGAACAGGAAGAAGCAGGATGGTTGACACGCGGCACTTCTTGGGTGAAGGGTTATGTTTCAGGTGTTTCTGAATATCTATCCCCAAAAGCTCCCGAAGACCCTATTCTTAATCAGCAGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005912 GO:0006810 GO:0007043 GO:0007154 GO:0007163 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0009555 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016323 GO:0022607 GO:0023052 GO:0030011 GO:0030029 GO:0030054 GO:0032501 GO:0032502 GO:0033036 GO:0033043 GO:0034329 GO:0034330 GO:0035088 GO:0035090 GO:0035239 GO:0035295 GO:0042886 GO:0044085 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045108 GO:0045184 GO:0045197 GO:0045199 GO:0045216 GO:0048229 GO:0048513 GO:0048546 GO:0048557 GO:0048562 GO:0048565 GO:0048566 GO:0048568 GO:0048598 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051234 GO:0051493 GO:0051716 GO:0055046 GO:0055123 GO:0061245 GO:0065007 GO:0070161 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0098590

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8

Protein Analysis

487

Amino Acids

53.84

Weight (kDa)

4.62

Isoelectric Point (pI)

47.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	192 - 244	8e-08	Leucine rich repeat
LRR_8	PF13855	278 - 337	6.1e-06	Leucine rich repeat
LRR_14	PF23598	289 - 357	3.9e-08	Leucine-rich repeat region
LRR_8	PF13855	349 - 408	1.5e-10	Leucine rich repeat
LRR_14	PF23598	360 - 406	4.8e-06	Leucine-rich repeat region
LRR_4	PF12799	373 - 407	2.4e-06	Leucine Rich repeats (2 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11330 AT5G05850
fragaria_vesca	FvH4_2g00400 FvH4_5g35210 FvH4_5g35210 FvH4_5g35210
malus_domestica	MD05G1037800.v1.1 MD10G1041600.v1.1
prunus_persica	Prupe.8G003900_v2.0.a1
pyrus_communis	pycom05g02800 pycom10g02870
rosa_chinensis	RchiOBHm_Chr6g0249641 RchiOBHm_Chr7g0236341
rosa_laevigata	RLG00000001082 RLG00000015555 RLG00000018499 RLG00000018876 RLG00000019048
rosa_multiflora	Rmu_co8191622.1_g000001 Rmu_co8329307.1_g000001 Rmu_sc0000704.1_g000050
rosa_roxburghii	Rroxscaffold_1G00019180 Rroxscaffold_3G00225210
rosa_rugosa	Rorug03G0338400 Rorug04G0195800 Rorug05G0494200 Rorug07G0296200 Rorug07G0296300 Rorug07G0296400 Rorug07G0296500 Rorug07G0296500 Rorug07G0296500 Rorug07G0296600 Rorug07G0296700 Rorug07G0296700
rosa_samantha	Rh1AG198700 Rh2AG167200 Rh2AG422000 Rh2BG174100 Rh2DG172600 Rh2DG587800 Rh3AG279400 Rh4AG190400 Rh5BG446700 Rh5DG459100 Rh6AG004200 Rh6AG382900 Rh6BG005900 Rh6CG003200 Rh6CG396200 Rh6DG003000 Rh7AG451000 Rh7BG422700 Rh7CG470600 Rh7DG440400
rosa_wichuraiana	Rw0G019890 Rw6G000460 Rw7G037490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	170
Acc36I	ACCTGC	1 cut(s)	822
AccI	GTMKAC	2 cut(s)	573, 719
AccII	CGCG	3 cut(s)	182, 192, 1371
AccIII	TCCGGA	1 cut(s)	528
AclWI	GGATC	8 cut(s)	12, 54, 67, 107, 213, 364, 591, 629
AcoI	YGGCCR	7 cut(s)	198, 301, 315, 549, 616, 1033, 1177
AcsI	RAATTY	2 cut(s)	712, 766
AcuI	CTGAAG	1 cut(s)	620
AcyI	GRCGYC	3 cut(s)	420, 498, 545
AfaI	GTAC	2 cut(s)	875, 1338
AfiI	CCNNNNNNNGG	7 cut(s)	56, 379, 382, 429, 454, 558, 1225
AgeI	ACCGGT	1 cut(s)	447
AgsI	TTSAA	8 cut(s)	772, 862, 934, 1003, 1187, 1250, 1262, 1334
AhdI	GACNNNNNGTC	1 cut(s)	94
AhlI	ACTAGT	1 cut(s)	1043
AjiI	CACGTC	3 cut(s)	205, 313, 394
AjnI	CCWGG	2 cut(s)	36, 1206
Alw21I	GWGCWC	2 cut(s)	237, 1095
Alw26I	GTCTC	8 cut(s)	88, 181, 251, 314, 740, 790, 1052, 1061
AlwI	GGATC	8 cut(s)	12, 54, 67, 107, 213, 364, 591, 629
AlwNI	CAGNNNCTG	1 cut(s)	122
Ama87I	CYCGRG	2 cut(s)	605, 743
Aor13HI	TCCGGA	1 cut(s)	528
ApeKI	GCWGC	7 cut(s)	122, 328, 538, 661, 757, 760, 1456
ApoI	RAATTY	2 cut(s)	712, 766
AsiGI	ACCGGT	1 cut(s)	447
Asp700I	GAANNNNTTC	1 cut(s)	14
AspLEI	GCGC	1 cut(s)	194
AspS9I	GGNCC	4 cut(s)	40, 214, 560, 565
AsuC2I	CCSGG	3 cut(s)	553, 569, 1097
AsuHPI	GGTGA	3 cut(s)	220, 1121, 1396
AvaI	CYCGRG	2 cut(s)	605, 743
AvaII	GGWCC	2 cut(s)	40, 565
BamHI	GGATCC	1 cut(s)	59
BanII	GRGCYC	2 cut(s)	237, 1095
BauI	CACGAG	1 cut(s)	254
BbsI	GAAGAC	2 cut(s)	1010, 1443
Bbv12I	GWGCWC	2 cut(s)	237, 1095
BbvI	GCAGC	6 cut(s)	109, 340, 550, 648, 744, 747
BccI	CCATC	5 cut(s)	107, 488, 1205, 1274, 1353
BceAI	ACGGC	3 cut(s)	179, 272, 288
BcgI	CGANNNNNNTGC	2 cut(s)	739, 773
BciT130I	CCWGG	2 cut(s)	38, 1208
BciVI	GTATCC	1 cut(s)	1093
BcnI	CCSGG	3 cut(s)	553, 569, 1097
BcoDI	GTCTC	8 cut(s)	88, 181, 251, 314, 740, 790, 1052, 1061
BcuI	ACTAGT	1 cut(s)	1043
BfaI	CTAG	3 cut(s)	701, 1025, 1044
BfmI	CTRYAG	4 cut(s)	536, 662, 829, 911
BfuAI	ACCTGC	1 cut(s)	822
BfuI	GTATCC	1 cut(s)	1093
BglI	GCCNNNNNGGC	1 cut(s)	206
Bme1390I	CCNGG	5 cut(s)	38, 553, 569, 1097, 1208
Bme18I	GGWCC	2 cut(s)	40, 565
BmeRI	GACNNNNNGTC	1 cut(s)	94
BmeT110I	CYCGRG	2 cut(s)	605, 743
BmgBI	CACGTC	3 cut(s)	205, 313, 394
BmgT120I	GGNCC	4 cut(s)	40, 214, 560, 565
BmiI	GGNNCC	3 cut(s)	11, 61, 1230
BmrFI	CCNGG	5 cut(s)	38, 553, 569, 1097, 1208
BmsI	GCATC	4 cut(s)	12, 138, 286, 982
BpiI	GAAGAC	2 cut(s)	1010, 1443
BpmI	CTGGAG	2 cut(s)	359, 401
Bpu10I	CCTNAGC	1 cut(s)	210
BpuEI	CTTGAG	2 cut(s)	398, 1109
BpuMI	CCSGG	3 cut(s)	553, 569, 1097
Bsa29I	ATCGAT	1 cut(s)	294
BsaAI	YACGTR	2 cut(s)	873, 1013
BsaHI	GRCGYC	3 cut(s)	420, 498, 545
BsaI	GGTCTC	1 cut(s)	251
BsaJI	CCNNGG	5 cut(s)	54, 195, 273, 423, 606
BsaWI	WCCGGW	3 cut(s)	144, 447, 528
Bsc4I	CCNNNNNNNGG	7 cut(s)	56, 379, 382, 429, 454, 558, 1225
Bse118I	RCCGGY	3 cut(s)	42, 299, 447
Bse1I	ACTGG	2 cut(s)	1068, 1308
BseAI	TCCGGA	1 cut(s)	528
BseBI	CCWGG	2 cut(s)	38, 1208
BseCI	ATCGAT	1 cut(s)	294
BseDI	CCNNGG	5 cut(s)	54, 195, 273, 423, 606
BseGI	GGATG	7 cut(s)	99, 153, 499, 856, 997, 1216, 1364
BseLI	CCNNNNNNNGG	7 cut(s)	56, 379, 382, 429, 454, 558, 1225
BseMII	CTCAG	3 cut(s)	224, 1080, 1153
BseNI	ACTGG	2 cut(s)	1068, 1308
BseRI	GAGGAG	9 cut(s)	398, 440, 488, 491, 494, 497, 533, 623, 767
BseX3I	CGGCCG	2 cut(s)	301, 549
BseXI	GCAGC	6 cut(s)	109, 340, 550, 648, 744, 747
BsgI	GTGCAG	1 cut(s)	947
Bsh1236I	CGCG	3 cut(s)	182, 192, 1371
Bsh1285I	CGRYCG	4 cut(s)	244, 304, 452, 552
BshTI	ACCGGT	1 cut(s)	447
BshVI	ATCGAT	1 cut(s)	294
BsiEI	CGRYCG	4 cut(s)	244, 304, 452, 552
BsiHKAI	GWGCWC	2 cut(s)	237, 1095
BsiHKCI	CYCGRG	2 cut(s)	605, 743
BslFI	GGGAC	1 cut(s)	568
BslI	CCNNNNNNNGG	7 cut(s)	56, 379, 382, 429, 454, 558, 1225
BsmAI	GTCTC	8 cut(s)	88, 181, 251, 314, 740, 790, 1052, 1061
BsmBI	CGTCTC	4 cut(s)	88, 181, 314, 740
BsmFI	GGGAC	1 cut(s)	568
Bso31I	GGTCTC	1 cut(s)	251
BsoBI	CYCGRG	2 cut(s)	605, 743
Bsp1286I	GDGCHC	2 cut(s)	237, 1095
Bsp13I	TCCGGA	1 cut(s)	528
BspCNI	CTCAG	3 cut(s)	223, 1081, 1152
BspDI	ATCGAT	1 cut(s)	294
BspEI	TCCGGA	1 cut(s)	528
BspFNI	CGCG	3 cut(s)	182, 192, 1371
BspLI	GGNNCC	3 cut(s)	11, 61, 1230
BspMAI	CTGCAG	3 cut(s)	540, 666, 833
BspMI	ACCTGC	1 cut(s)	822
BspPI	GGATC	8 cut(s)	12, 54, 67, 107, 213, 364, 591, 629
BspQI	GCTCTTC	2 cut(s)	345, 1167
BspTNI	GGTCTC	1 cut(s)	251
BsrFI	RCCGGY	3 cut(s)	42, 299, 447
BsrI	ACTGG	2 cut(s)	1068, 1308
BssAI	RCCGGY	3 cut(s)	42, 299, 447
BssECI	CCNNGG	5 cut(s)	54, 195, 273, 423, 606
BssNI	GRCGYC	3 cut(s)	420, 498, 545
BssSI	CACGAG	1 cut(s)	254
BssT1I	CCWWGG	2 cut(s)	54, 273
Bst2BI	CACGAG	1 cut(s)	254
Bst2UI	CCWGG	2 cut(s)	38, 1208
Bst4CI	ACNGT	2 cut(s)	262, 784
Bst6I	CTCTTC	2 cut(s)	345, 1167
BstACI	GRCGYC	3 cut(s)	420, 498, 545
BstBAI	YACGTR	2 cut(s)	873, 1013
BstC8I	GCNNGC	6 cut(s)	285, 301, 543, 593, 666, 1328
BstDEI	CTNAG	3 cut(s)	210, 1089, 1139
BstDSI	CCRYGG	1 cut(s)	195
BstF5I	GGATG	7 cut(s)	99, 153, 499, 856, 997, 1216, 1364
BstFNI	CGCG	3 cut(s)	182, 192, 1371
BstHHI	GCGC	1 cut(s)	194
BstMAI	GTCTC	8 cut(s)	88, 181, 251, 314, 740, 790, 1052, 1061
BstMCI	CGRYCG	4 cut(s)	244, 304, 452, 552
BstMWI	GCNNNNNNNGC	7 cut(s)	206, 284, 305, 314, 601, 706, 925
BstNI	CCWGG	2 cut(s)	38, 1208
BstNSI	RCATGY	1 cut(s)	1330
BstSCI	CCNGG	5 cut(s)	36, 551, 567, 1095, 1206
BstSFI	CTRYAG	4 cut(s)	536, 662, 829, 911
BstUI	CGCG	3 cut(s)	182, 192, 1371
BstV1I	GCAGC	6 cut(s)	109, 340, 550, 648, 744, 747
BstV2I	GAAGAC	2 cut(s)	1010, 1443
BstX2I	RGATCY	1 cut(s)	59
BstXI	CCANNNNNNTGG	1 cut(s)	730
BstYI	RGATCY	1 cut(s)	59
BstZI	CGGCCG	2 cut(s)	301, 549
Bsu15I	ATCGAT	1 cut(s)	294
BsuI	GTATCC	1 cut(s)	1093
BsuTUI	ATCGAT	1 cut(s)	294
BtgI	CCRYGG	1 cut(s)	195
BtgZI	GCGATG	2 cut(s)	160, 197
BtrI	CACGTC	3 cut(s)	205, 313, 394
BtsCI	GGATG	7 cut(s)	99, 153, 499, 856, 997, 1216, 1364
BtsI	GCAGTG	2 cut(s)	737, 826
BtsIMutI	CAGTG	5 cut(s)	631, 737, 780, 826, 1086
BveI	ACCTGC	1 cut(s)	822
Cac8I	GCNNGC	6 cut(s)	285, 301, 543, 593, 666, 1328
CaiI	CAGNNNCTG	1 cut(s)	122
CfoI	GCGC	1 cut(s)	194
Cfr10I	RCCGGY	3 cut(s)	42, 299, 447
Cfr13I	GGNCC	4 cut(s)	40, 214, 560, 565
ClaI	ATCGAT	1 cut(s)	294
CpoI	CGGWCCG	1 cut(s)	565
CseI	GACGC	4 cut(s)	198, 428, 487, 534
Csp6I	GTAC	2 cut(s)	874, 1337
CspAI	ACCGGT	1 cut(s)	447
CspI	CGGWCCG	1 cut(s)	565
CviAII	CATG	4 cut(s)	94, 364, 1157, 1327
CviQI	GTAC	2 cut(s)	874, 1337
DdeI	CTNAG	3 cut(s)	210, 1089, 1139
DrdI	GACNNNNNNGTC	1 cut(s)	170
DriI	GACNNNNNGTC	1 cut(s)	94
DseDI	GACNNNNNNGTC	1 cut(s)	170
EaeI	YGGCCR	7 cut(s)	198, 301, 315, 549, 616, 1033, 1177
EagI	CGGCCG	2 cut(s)	301, 549
Eam1104I	CTCTTC	2 cut(s)	345, 1167
Eam1105I	GACNNNNNGTC	1 cut(s)	94
EarI	CTCTTC	2 cut(s)	345, 1167
EciI	GGCGGA	4 cut(s)	259, 470, 1221, 1322
Ecl136II	GAGCTC	2 cut(s)	235, 1093
EclXI	CGGCCG	2 cut(s)	301, 549
Eco130I	CCWWGG	2 cut(s)	54, 273
Eco24I	GRGCYC	2 cut(s)	237, 1095
Eco31I	GGTCTC	1 cut(s)	251
Eco47I	GGWCC	2 cut(s)	40, 565
Eco52I	CGGCCG	2 cut(s)	301, 549
Eco53kI	GAGCTC	2 cut(s)	235, 1093
Eco57I	CTGAAG	1 cut(s)	620
Eco88I	CYCGRG	2 cut(s)	605, 743
EcoICRI	GAGCTC	2 cut(s)	235, 1093
EcoRII	CCWGG	2 cut(s)	36, 1206
EcoT14I	CCWWGG	2 cut(s)	54, 273
EcoT38I	GRGCYC	2 cut(s)	237, 1095
ErhI	CCWWGG	2 cut(s)	54, 273
Esp3I	CGTCTC	4 cut(s)	88, 181, 314, 740
FaeI	CATG	4 cut(s)	97, 367, 1160, 1330
FaiI	YATR	8 cut(s)	95, 365, 897, 1158, 1280, 1328, 1395, 1462
FaqI	GGGAC	1 cut(s)	568
FatI	CATG	4 cut(s)	93, 363, 1156, 1326
FauI	CCCGC	1 cut(s)	334
FblI	GTMKAC	2 cut(s)	573, 719
FokI	GGATG	7 cut(s)	86, 160, 506, 863, 1004, 1223, 1371
FriOI	GRGCYC	2 cut(s)	237, 1095
FspBI	CTAG	3 cut(s)	701, 1025, 1044
GlaI	GCGC	1 cut(s)	193
GsuI	CTGGAG	2 cut(s)	359, 401
HgaI	GACGC	4 cut(s)	198, 428, 487, 534
HhaI	GCGC	1 cut(s)	194
Hin1I	GRCGYC	3 cut(s)	420, 498, 545
Hin1II	CATG	4 cut(s)	97, 367, 1160, 1330
Hin6I	GCGC	1 cut(s)	192
HinP1I	GCGC	1 cut(s)	192
HincII	GTYRAC	3 cut(s)	265, 574, 1365
HindII	GTYRAC	3 cut(s)	265, 574, 1365
HindIII	AAGCTT	2 cut(s)	407, 917
HinfI	GANTC	5 cut(s)	266, 335, 532, 734, 815
HphI	GGTGA	3 cut(s)	220, 1121, 1396
Hpy166II	GTNNAC	4 cut(s)	265, 574, 720, 1365
Hpy188I	TCNGA	5 cut(s)	9, 88, 163, 583, 1411
Hpy188III	TCNNGA	9 cut(s)	19, 254, 439, 529, 674, 812, 1166, 1238, 1433
Hpy8I	GTNNAC	4 cut(s)	265, 574, 720, 1365
Hpy99I	CGWCG	4 cut(s)	83, 206, 398, 550
HpyAV	CCTTC	3 cut(s)	481, 818, 1381
HpyCH4III	ACNGT	2 cut(s)	262, 784
HpyCH4IV	ACGT	6 cut(s)	33, 204, 312, 393, 872, 1012
HpyCH4V	TGCA	7 cut(s)	363, 391, 538, 664, 763, 831, 928
HpyF10VI	GCNNNNNNNGC	7 cut(s)	206, 284, 305, 314, 601, 706, 925
HpyF3I	CTNAG	3 cut(s)	210, 1089, 1139
HpySE526I	ACGT	6 cut(s)	33, 204, 312, 393, 872, 1012
Hsp92I	GRCGYC	3 cut(s)	420, 498, 545
Hsp92II	CATG	4 cut(s)	97, 367, 1160, 1330
HspAI	GCGC	1 cut(s)	192
Kpn2I	TCCGGA	1 cut(s)	528
KroI	GCCGGC	1 cut(s)	299
KroNI	GCCGGC	1 cut(s)	301
LguI	GCTCTTC	2 cut(s)	345, 1167
LmnI	GCTCC	4 cut(s)	325, 780, 1098, 1435
Lsp1109I	GCAGC	6 cut(s)	109, 340, 550, 648, 744, 747
LweI	GCATC	4 cut(s)	12, 138, 286, 982
MaeI	CTAG	3 cut(s)	701, 1025, 1044
MaeII	ACGT	6 cut(s)	33, 204, 312, 393, 872, 1012
MaeIII	GTNAC	2 cut(s)	735, 1299
MboII	GAAGA	7 cut(s)	362, 1010, 1154, 1322, 1325, 1361, 1448
MflI	RGATCY	1 cut(s)	59
MhlI	GDGCHC	2 cut(s)	237, 1095
MluCI	AATT	3 cut(s)	712, 766, 1072
MlyI	GAGTC	3 cut(s)	260, 743, 809
MmeI	TCCRAC	4 cut(s)	111, 186, 675, 828
MroI	TCCGGA	1 cut(s)	528
MroNI	GCCGGC	1 cut(s)	299
MroXI	GAANNNNTTC	1 cut(s)	14
MseI	TTAA	4 cut(s)	906, 1197, 1203, 1449
MslI	CAYNNNNRTG	1 cut(s)	1002
MspA1I	CMGCKG	2 cut(s)	122, 379
MspR9I	CCNGG	5 cut(s)	38, 553, 569, 1097, 1208
MvaI	CCWGG	2 cut(s)	38, 1208
MvnI	CGCG	3 cut(s)	182, 192, 1371
MwoI	GCNNNNNNNGC	7 cut(s)	206, 284, 305, 314, 601, 706, 925
NaeI	GCCGGC	1 cut(s)	301
NciI	CCSGG	3 cut(s)	553, 569, 1097
NgoMIV	GCCGGC	1 cut(s)	299
NlaIII	CATG	4 cut(s)	97, 367, 1160, 1330
NlaIV	GGNNCC	3 cut(s)	11, 61, 1230
NmeAIII	GCCGAG	3 cut(s)	216, 343, 448
NmuCI	GTSAC	1 cut(s)	735
NspI	RCATGY	1 cut(s)	1330
PaeI	GCATGC	1 cut(s)	1330
PciSI	GCTCTTC	2 cut(s)	345, 1167
PcsI	WCGNNNNNNNCGW	3 cut(s)	291, 399, 592
PdiI	GCCGGC	1 cut(s)	301
PdmI	GAANNNNTTC	1 cut(s)	14
PfeI	GAWTC	2 cut(s)	335, 532
PflFI	GACNNNGTC	2 cut(s)	509, 569
PfoI	TCCNGGA	2 cut(s)	36, 1095
PinAI	ACCGGT	1 cut(s)	447
PleI	GAGTC	3 cut(s)	260, 742, 809
PpsI	GAGTC	3 cut(s)	260, 742, 809
Ppu21I	YACGTR	2 cut(s)	873, 1013
Psp124BI	GAGCTC	2 cut(s)	237, 1095
Psp6I	CCWGG	2 cut(s)	36, 1206
PspGI	CCWGG	2 cut(s)	36, 1206
PspN4I	GGNNCC	3 cut(s)	11, 61, 1230
PspPI	GGNCC	4 cut(s)	40, 214, 560, 565
PstI	CTGCAG	3 cut(s)	540, 666, 833
PstNI	CAGNNNCTG	1 cut(s)	122
PsuI	RGATCY	1 cut(s)	59
PsyI	GACNNNGTC	2 cut(s)	509, 569
PvuII	CAGCTG	1 cut(s)	379
RsaI	GTAC	2 cut(s)	875, 1338
RsaNI	GTAC	2 cut(s)	874, 1337
RseI	CAYNNNNRTG	1 cut(s)	1002
Rsr2I	CGGWCCG	1 cut(s)	565
RsrII	CGGWCCG	1 cut(s)	565
SacI	GAGCTC	2 cut(s)	237, 1095
SalI	GTCGAC	1 cut(s)	572
SapI	GCTCTTC	2 cut(s)	345, 1167
SaqAI	TTAA	4 cut(s)	906, 1197, 1203, 1449
Sau96I	GGNCC	4 cut(s)	40, 214, 560, 565
SchI	GAGTC	3 cut(s)	260, 743, 809
ScrFI	CCNGG	5 cut(s)	38, 553, 569, 1097, 1208
SduI	GDGCHC	2 cut(s)	237, 1095
SfaNI	GCATC	4 cut(s)	12, 138, 286, 982
SfcI	CTRYAG	4 cut(s)	536, 662, 829, 911
SinI	GGWCC	2 cut(s)	40, 565
SmiMI	CAYNNNNRTG	1 cut(s)	1002
SmlI	CTYRAG	2 cut(s)	413, 1124
SmoI	CTYRAG	2 cut(s)	413, 1124
SpeI	ACTAGT	1 cut(s)	1043
SphI	GCATGC	1 cut(s)	1330
Sse9I	AATT	3 cut(s)	712, 766, 1072
SspMI	CTAG	3 cut(s)	701, 1025, 1044
SstI	GAGCTC	2 cut(s)	237, 1095
StyD4I	CCNGG	5 cut(s)	36, 551, 567, 1095, 1206
StyI	CCWWGG	2 cut(s)	54, 273
TaaI	ACNGT	2 cut(s)	262, 784
TaiI	ACGT	6 cut(s)	36, 207, 315, 396, 875, 1015
TaqI	TCGA	4 cut(s)	294, 513, 573, 586
TaqII	GACCGA	1 cut(s)	258
TasI	AATT	3 cut(s)	712, 766, 1072
TatI	WGTACW	1 cut(s)	1336
TauI	GCSGC	4 cut(s)	122, 182, 1182, 1374
TfiI	GAWTC	2 cut(s)	335, 532
Tru1I	TTAA	4 cut(s)	906, 1197, 1203, 1449
Tru9I	TTAA	4 cut(s)	906, 1197, 1203, 1449
TscAI	CASTG	5 cut(s)	631, 744, 787, 833, 1093
TseFI	GTSAC	1 cut(s)	735
TseI	GCWGC	7 cut(s)	122, 328, 538, 661, 757, 760, 1456
Tsp45I	GTSAC	1 cut(s)	735
TspDTI	ATGAA	1 cut(s)	1145
TspGWI	ACGGA	3 cut(s)	211, 338, 932
TspRI	CASTG	5 cut(s)	631, 744, 787, 833, 1093
Tth111I	GACNNNGTC	2 cut(s)	509, 569
VpaK11BI	GGWCC	2 cut(s)	40, 565
XapI	RAATTY	2 cut(s)	712, 766
XceI	RCATGY	1 cut(s)	1330
XmiI	GTMKAC	2 cut(s)	573, 719
XmnI	GAANNNNTTC	1 cut(s)	14
XspI	CTAG	3 cut(s)	701, 1025, 1044

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.