Rmu_co8329307.1_g000001

Plant intracellular ras-group-related LRR protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8329307.1
Physical Location & Seq
Reverse (-)
1 .. 938
938 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8329307.1_g000001.1.cds

Sequence Viewer

Length: 836 bp
atggatcggaaccgcttcccgatgctctcctacgtcctggaccggcttccctccttgggatccaagccaaccacccccgtcgtctccgacctcatgtccatccacatcggcgatccagccgctgctcaaagcgagatcgctgaccggatgccccacctctccgacccaaaagtcatcgccgcgatgagacgcgccgtggccgacgtggctcaggcccgatccgtcctcaccgagctcggcgaccgacccgatcacgagaccgttgactccgccaaggccaagctcgccgccatcgatgccggccgtgctgacgtggcggagacggagcagcgtgaatcggcggggagagaagagcaagagtgcatggcgatcctccagctggaggagttgcacgtcgcctacgagaagcttctcagggacgccgaggagaggctcgtcaagatttaccggtcggcggaggccggagtggtggagggggaggaggaggagaaggtggatggcgtcagcgaccaagtcgatgaggaggtcgtccggattctgcagcaggcgtcgtccgggactgggccggaccgggtcgacctctcggatcgaggcttgcgtttcttgcccgaggagtttggccggatcagtggattgcttcagcttgatctttccaacaatgagctgcaggccattcctgatacaatagccggattagagaagctagaaatgctgaatttgtctaccaatctcttggagtcactgcccgagacgattgggctgctgcaaaatttgaagctcctcactgtctccggcaacaagctaactgcccttcctgactctatctgccactgcag

Protein Analysis

278

Amino Acids

30.39

Weight (kDa)

4.59

Isoelectric Point (pI)

48.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 170
AccI GTMKAC 2 cut(s) 576, 722
AccII CGCG 2 cut(s) 182, 192
AccIII TCCGGA 1 cut(s) 531
AciI CCGC 8 cut(s) 13, 120, 180, 270, 288, 317, 341, 455
AclWI GGATC 8 cut(s) 12, 54, 67, 107, 213, 364, 594, 632
AcoI YGGCCR 3 cut(s) 198, 301, 619
AcsI RAATTY 2 cut(s) 715, 769
AcuI CTGAAG 1 cut(s) 623
AcyI GRCGYC 3 cut(s) 420, 501, 548
AfiI CCNNNNNNNGG 6 cut(s) 56, 379, 382, 429, 454, 561
AgeI ACCGGT 1 cut(s) 447
AgsI TTSAA 1 cut(s) 775
AhdI GACNNNNNGTC 1 cut(s) 94
AjiI CACGTC 3 cut(s) 205, 313, 394
AjnI CCWGG 1 cut(s) 36
AluBI AGCT 9 cut(s) 235, 283, 379, 409, 643, 664, 703, 778, 802
AluI AGCT 9 cut(s) 235, 283, 379, 409, 643, 664, 703, 778, 802
Alw21I GWGCWC 1 cut(s) 237
Alw26I GTCTC 6 cut(s) 88, 181, 251, 314, 743, 793
AlwI GGATC 8 cut(s) 12, 54, 67, 107, 213, 364, 594, 632
AlwNI CAGNNNCTG 1 cut(s) 122
Ama87I CYCGRG 2 cut(s) 608, 746
Aor13HI TCCGGA 1 cut(s) 531
AoxI GGCC 8 cut(s) 198, 213, 276, 301, 459, 563, 619, 669
ApeKI GCWGC 6 cut(s) 122, 328, 541, 664, 760, 763
ApoI RAATTY 2 cut(s) 715, 769
AsiGI ACCGGT 1 cut(s) 447
Asp700I GAANNNNTTC 1 cut(s) 14
AspLEI GCGC 1 cut(s) 194
AspS9I GGNCC 4 cut(s) 40, 214, 563, 568
AsuC2I CCSGG 2 cut(s) 556, 572
AsuHPI GGTGA 1 cut(s) 220
AvaI CYCGRG 2 cut(s) 608, 746
AvaII GGWCC 2 cut(s) 40, 568
BamHI GGATCC 1 cut(s) 59
BanII GRGCYC 1 cut(s) 237
BauI CACGAG 1 cut(s) 254
Bbv12I GWGCWC 1 cut(s) 237
BbvI GCAGC 6 cut(s) 109, 340, 553, 651, 747, 750
BccI CCATC 3 cut(s) 107, 299, 491
BceAI ACGGC 2 cut(s) 179, 288
BcgI CGANNNNNNTGC 2 cut(s) 742, 776
BciT130I CCWGG 1 cut(s) 38
BcnI CCSGG 2 cut(s) 556, 572
BcoDI GTCTC 6 cut(s) 88, 181, 251, 314, 743, 793
BfaI CTAG 1 cut(s) 704
BfmI CTRYAG 3 cut(s) 539, 665, 832
BglI GCCNNNNNGGC 1 cut(s) 206
BisI GCNGC 9 cut(s) 120, 123, 180, 288, 329, 542, 665, 761, 764
BlsI GCNGC 9 cut(s) 121, 124, 181, 289, 330, 543, 666, 762, 765
Bme1390I CCNGG 3 cut(s) 38, 556, 572
Bme18I GGWCC 2 cut(s) 40, 568
BmeRI GACNNNNNGTC 1 cut(s) 94
BmeT110I CYCGRG 2 cut(s) 608, 746
BmgBI CACGTC 3 cut(s) 205, 313, 394
BmgT120I GGNCC 4 cut(s) 40, 214, 563, 568
BmiI GGNNCC 2 cut(s) 11, 61
BmrFI CCNGG 3 cut(s) 38, 556, 572
BmrI ACTGGG 1 cut(s) 570
BmsI GCATC 3 cut(s) 12, 138, 286
BmuI ACTGGG 1 cut(s) 570
BpmI CTGGAG 2 cut(s) 359, 401
Bpu10I CCTNAGC 1 cut(s) 210
BpuMI CCSGG 2 cut(s) 556, 572
Bsa29I ATCGAT 1 cut(s) 294
BsaHI GRCGYC 3 cut(s) 420, 501, 548
BsaI GGTCTC 1 cut(s) 251
BsaJI CCNNGG 5 cut(s) 54, 195, 273, 423, 609
BsaWI WCCGGW 3 cut(s) 144, 447, 531
Bsc4I CCNNNNNNNGG 6 cut(s) 56, 379, 382, 429, 454, 561
Bse118I RCCGGY 3 cut(s) 42, 299, 447
Bse1I ACTGG 1 cut(s) 565
BseAI TCCGGA 1 cut(s) 531
BseBI CCWGG 1 cut(s) 38
BseCI ATCGAT 1 cut(s) 294
BseDI CCNNGG 5 cut(s) 54, 195, 273, 423, 609
BseGI GGATG 3 cut(s) 99, 153, 502
BseLI CCNNNNNNNGG 6 cut(s) 56, 379, 382, 429, 454, 561
BseMII CTCAG 2 cut(s) 224, 427
BseNI ACTGG 1 cut(s) 565
BseRI GAGGAG 8 cut(s) 398, 440, 494, 497, 500, 536, 626, 770
BseX3I CGGCCG 1 cut(s) 301
BseXI GCAGC 6 cut(s) 109, 340, 553, 651, 747, 750
Bsh1236I CGCG 2 cut(s) 182, 192
Bsh1285I CGRYCG 3 cut(s) 244, 304, 452
BshFI GGCC 8 cut(s) 200, 215, 278, 303, 461, 565, 621, 671
BshTI ACCGGT 1 cut(s) 447
BshVI ATCGAT 1 cut(s) 294
BsiEI CGRYCG 3 cut(s) 244, 304, 452
BsiHKAI GWGCWC 1 cut(s) 237
BsiHKCI CYCGRG 2 cut(s) 608, 746
BslFI GGGAC 2 cut(s) 431, 571
BslI CCNNNNNNNGG 6 cut(s) 56, 379, 382, 429, 454, 561
BsmAI GTCTC 6 cut(s) 88, 181, 251, 314, 743, 793
BsmBI CGTCTC 4 cut(s) 88, 181, 314, 743
BsmFI GGGAC 2 cut(s) 431, 571
BsnI GGCC 8 cut(s) 200, 215, 278, 303, 461, 565, 621, 671
Bso31I GGTCTC 1 cut(s) 251
BsoBI CYCGRG 2 cut(s) 608, 746
Bsp1286I GDGCHC 1 cut(s) 237
Bsp13I TCCGGA 1 cut(s) 531
BspACI CCGC 8 cut(s) 13, 120, 180, 270, 288, 317, 341, 455
BspANI GGCC 8 cut(s) 200, 215, 278, 303, 461, 565, 621, 671
BspCNI CTCAG 2 cut(s) 223, 426
BspDI ATCGAT 1 cut(s) 294
BspEI TCCGGA 1 cut(s) 531
BspFNI CGCG 2 cut(s) 182, 192
BspLI GGNNCC 2 cut(s) 11, 61
BspMAI CTGCAG 3 cut(s) 543, 669, 836
BspPI GGATC 8 cut(s) 12, 54, 67, 107, 213, 364, 594, 632
BspQI GCTCTTC 1 cut(s) 345
BspTNI GGTCTC 1 cut(s) 251
BsrFI RCCGGY 3 cut(s) 42, 299, 447
BsrI ACTGG 1 cut(s) 565
BssAI RCCGGY 3 cut(s) 42, 299, 447
BssECI CCNNGG 5 cut(s) 54, 195, 273, 423, 609
BssNI GRCGYC 3 cut(s) 420, 501, 548
BssSI CACGAG 1 cut(s) 254
BssT1I CCWWGG 2 cut(s) 54, 273
Bst2BI CACGAG 1 cut(s) 254
Bst2UI CCWGG 1 cut(s) 38
Bst4CI ACNGT 2 cut(s) 262, 787
Bst6I CTCTTC 1 cut(s) 345
BstACI GRCGYC 3 cut(s) 420, 501, 548
BstC8I GCNNGC 5 cut(s) 285, 301, 546, 596, 669
BstDEI CTNAG 2 cut(s) 210, 413
BstDSI CCRYGG 1 cut(s) 195
BstF5I GGATG 3 cut(s) 99, 153, 502
BstFNI CGCG 2 cut(s) 182, 192
BstHHI GCGC 1 cut(s) 194
BstMAI GTCTC 6 cut(s) 88, 181, 251, 314, 743, 793
BstMCI CGRYCG 3 cut(s) 244, 304, 452
BstMWI GCNNNNNNNGC 7 cut(s) 206, 284, 296, 305, 314, 604, 709
BstNI CCWGG 1 cut(s) 38
BstSCI CCNGG 3 cut(s) 36, 554, 570
BstSFI CTRYAG 3 cut(s) 539, 665, 832
BstUI CGCG 2 cut(s) 182, 192
BstV1I GCAGC 6 cut(s) 109, 340, 553, 651, 747, 750
BstX2I RGATCY 1 cut(s) 59
BstXI CCANNNNNNTGG 1 cut(s) 733
BstYI RGATCY 1 cut(s) 59
BstZI CGGCCG 1 cut(s) 301
Bsu15I ATCGAT 1 cut(s) 294
BsuRI GGCC 8 cut(s) 200, 215, 278, 303, 461, 565, 621, 671
BsuTUI ATCGAT 1 cut(s) 294
BtgI CCRYGG 1 cut(s) 195
BtgZI GCGATG 2 cut(s) 160, 197
BtrI CACGTC 3 cut(s) 205, 313, 394
BtsCI GGATG 3 cut(s) 99, 153, 502
BtsI GCAGTG 2 cut(s) 740, 829
BtsIMutI CAGTG 4 cut(s) 634, 740, 783, 829
Cac8I GCNNGC 5 cut(s) 285, 301, 546, 596, 669
CaiI CAGNNNCTG 1 cut(s) 122
CfoI GCGC 1 cut(s) 194
Cfr10I RCCGGY 3 cut(s) 42, 299, 447
Cfr13I GGNCC 4 cut(s) 40, 214, 563, 568
ClaI ATCGAT 1 cut(s) 294
CpoI CGGWCCG 1 cut(s) 568
CseI GACGC 4 cut(s) 198, 428, 490, 537
CspAI ACCGGT 1 cut(s) 447
CspI CGGWCCG 1 cut(s) 568
CviAII CATG 2 cut(s) 94, 364
DdeI CTNAG 2 cut(s) 210, 413
DrdI GACNNNNNNGTC 1 cut(s) 170
DriI GACNNNNNGTC 1 cut(s) 94
DseDI GACNNNNNNGTC 1 cut(s) 170
EaeI YGGCCR 3 cut(s) 198, 301, 619
EagI CGGCCG 1 cut(s) 301
Eam1104I CTCTTC 1 cut(s) 345
Eam1105I GACNNNNNGTC 1 cut(s) 94
EarI CTCTTC 1 cut(s) 345
EciI GGCGGA 3 cut(s) 259, 332, 470
Ecl136II GAGCTC 1 cut(s) 235
EclXI CGGCCG 1 cut(s) 301
Eco130I CCWWGG 2 cut(s) 54, 273
Eco24I GRGCYC 1 cut(s) 237
Eco31I GGTCTC 1 cut(s) 251
Eco47I GGWCC 2 cut(s) 40, 568
Eco52I CGGCCG 1 cut(s) 301
Eco53kI GAGCTC 1 cut(s) 235
Eco57I CTGAAG 1 cut(s) 623
Eco88I CYCGRG 2 cut(s) 608, 746
EcoICRI GAGCTC 1 cut(s) 235
EcoRII CCWGG 1 cut(s) 36
EcoT14I CCWWGG 2 cut(s) 54, 273
EcoT38I GRGCYC 1 cut(s) 237
ErhI CCWWGG 2 cut(s) 54, 273
Esp3I CGTCTC 4 cut(s) 88, 181, 314, 743
FaeI CATG 2 cut(s) 97, 367
FaiI YATR 2 cut(s) 95, 365
FaqI GGGAC 2 cut(s) 431, 571
FatI CATG 2 cut(s) 93, 363
FauI CCCGC 1 cut(s) 334
FblI GTMKAC 2 cut(s) 576, 722
Fnu4HI GCNGC 9 cut(s) 120, 123, 180, 288, 329, 542, 665, 761, 764
FokI GGATG 3 cut(s) 86, 160, 509
FriOI GRGCYC 1 cut(s) 237
Fsp4HI GCNGC 9 cut(s) 120, 123, 180, 288, 329, 542, 665, 761, 764
FspBI CTAG 1 cut(s) 704
GlaI GCGC 1 cut(s) 193
GluI GCNGC 9 cut(s) 120, 123, 180, 288, 329, 542, 665, 761, 764
GsuI CTGGAG 2 cut(s) 359, 401
HaeIII GGCC 8 cut(s) 200, 215, 278, 303, 461, 565, 621, 671
HgaI GACGC 4 cut(s) 198, 428, 490, 537
HhaI GCGC 1 cut(s) 194
Hin1I GRCGYC 3 cut(s) 420, 501, 548
Hin1II CATG 2 cut(s) 97, 367
Hin6I GCGC 1 cut(s) 192
HinP1I GCGC 1 cut(s) 192
HincII GTYRAC 2 cut(s) 265, 577
HindII GTYRAC 2 cut(s) 265, 577
HindIII AAGCTT 1 cut(s) 407
HinfI GANTC 5 cut(s) 266, 335, 535, 737, 818
HphI GGTGA 1 cut(s) 220
Hpy166II GTNNAC 3 cut(s) 265, 577, 723
Hpy188I TCNGA 4 cut(s) 9, 88, 163, 586
Hpy188III TCNNGA 6 cut(s) 19, 254, 439, 532, 677, 815
Hpy8I GTNNAC 3 cut(s) 265, 577, 723
Hpy99I CGWCG 4 cut(s) 83, 206, 398, 553
HpyAV CCTTC 2 cut(s) 484, 821
HpyCH4III ACNGT 2 cut(s) 262, 787
HpyCH4IV ACGT 4 cut(s) 33, 204, 312, 393
HpyCH4V TGCA 6 cut(s) 363, 391, 541, 667, 766, 834
HpyF10VI GCNNNNNNNGC 7 cut(s) 206, 284, 296, 305, 314, 604, 709
HpyF3I CTNAG 2 cut(s) 210, 413
HpySE526I ACGT 4 cut(s) 33, 204, 312, 393
Hsp92I GRCGYC 3 cut(s) 420, 501, 548
Hsp92II CATG 2 cut(s) 97, 367
HspAI GCGC 1 cut(s) 192
Kpn2I TCCGGA 1 cut(s) 531
KroI GCCGGC 1 cut(s) 299
KroNI GCCGGC 1 cut(s) 301
LguI GCTCTTC 1 cut(s) 345
LmnI GCTCC 2 cut(s) 325, 783
Lsp1109I GCAGC 6 cut(s) 109, 340, 553, 651, 747, 750
LweI GCATC 3 cut(s) 12, 138, 286
MaeI CTAG 1 cut(s) 704
MaeII ACGT 4 cut(s) 33, 204, 312, 393
MaeIII GTNAC 1 cut(s) 738
MboII GAAGA 1 cut(s) 362
MflI RGATCY 1 cut(s) 59
MhlI GDGCHC 1 cut(s) 237
MluCI AATT 2 cut(s) 715, 769
MlyI GAGTC 3 cut(s) 260, 746, 812
MmeI TCCRAC 3 cut(s) 111, 186, 678
MroI TCCGGA 1 cut(s) 531
MroNI GCCGGC 1 cut(s) 299
MroXI GAANNNNTTC 1 cut(s) 14
MspA1I CMGCKG 2 cut(s) 122, 379
MspR9I CCNGG 3 cut(s) 38, 556, 572
MvaI CCWGG 1 cut(s) 38
MvnI CGCG 2 cut(s) 182, 192
MwoI GCNNNNNNNGC 7 cut(s) 206, 284, 296, 305, 314, 604, 709
NaeI GCCGGC 1 cut(s) 301
NciI CCSGG 2 cut(s) 556, 572
NgoMIV GCCGGC 1 cut(s) 299
NlaIII CATG 2 cut(s) 97, 367
NlaIV GGNNCC 2 cut(s) 11, 61
NmeAIII GCCGAG 2 cut(s) 216, 448
NmuCI GTSAC 1 cut(s) 738
PciSI GCTCTTC 1 cut(s) 345
PcsI WCGNNNNNNNCGW 3 cut(s) 291, 399, 595
PdiI GCCGGC 1 cut(s) 301
PdmI GAANNNNTTC 1 cut(s) 14
PfeI GAWTC 2 cut(s) 335, 535
PflFI GACNNNGTC 2 cut(s) 512, 572
PfoI TCCNGGA 2 cut(s) 36, 554
PinAI ACCGGT 1 cut(s) 447
PkrI GCNGC 9 cut(s) 121, 124, 181, 289, 330, 543, 666, 762, 765
PleI GAGTC 3 cut(s) 260, 745, 812
PpsI GAGTC 3 cut(s) 260, 745, 812
Psp124BI GAGCTC 1 cut(s) 237
Psp6I CCWGG 1 cut(s) 36
PspGI CCWGG 1 cut(s) 36
PspN4I GGNNCC 2 cut(s) 11, 61
PspPI GGNCC 4 cut(s) 40, 214, 563, 568
PstI CTGCAG 3 cut(s) 543, 669, 836
PstNI CAGNNNCTG 1 cut(s) 122
PsuI RGATCY 1 cut(s) 59
PsyI GACNNNGTC 2 cut(s) 512, 572
PvuII CAGCTG 1 cut(s) 379
Rsr2I CGGWCCG 1 cut(s) 568
RsrII CGGWCCG 1 cut(s) 568
SacI GAGCTC 1 cut(s) 237
SalI GTCGAC 1 cut(s) 575
SapI GCTCTTC 1 cut(s) 345
SatI GCNGC 9 cut(s) 120, 123, 180, 288, 329, 542, 665, 761, 764
Sau96I GGNCC 4 cut(s) 40, 214, 563, 568
SchI GAGTC 3 cut(s) 260, 746, 812
ScrFI CCNGG 3 cut(s) 38, 556, 572
SduI GDGCHC 1 cut(s) 237
SfaNI GCATC 3 cut(s) 12, 138, 286
SfcI CTRYAG 3 cut(s) 539, 665, 832
SinI GGWCC 2 cut(s) 40, 568
Sse9I AATT 2 cut(s) 715, 769
SsiI CCGC 8 cut(s) 13, 120, 180, 270, 288, 317, 341, 455
SspMI CTAG 1 cut(s) 704
SstI GAGCTC 1 cut(s) 237
StyD4I CCNGG 3 cut(s) 36, 554, 570
StyI CCWWGG 2 cut(s) 54, 273
TaaI ACNGT 2 cut(s) 262, 787
TaiI ACGT 4 cut(s) 36, 207, 315, 396
TaqI TCGA 4 cut(s) 294, 516, 576, 589
TaqII GACCGA 1 cut(s) 258
TasI AATT 2 cut(s) 715, 769
TauI GCSGC 3 cut(s) 122, 182, 290
TfiI GAWTC 2 cut(s) 335, 535
TscAI CASTG 4 cut(s) 634, 747, 790, 836
TseFI GTSAC 1 cut(s) 738
TseI GCWGC 6 cut(s) 122, 328, 541, 664, 760, 763
Tsp45I GTSAC 1 cut(s) 738
TspGWI ACGGA 2 cut(s) 211, 338
TspRI CASTG 4 cut(s) 634, 747, 790, 836
Tth111I GACNNNGTC 2 cut(s) 512, 572
VpaK11BI GGWCC 2 cut(s) 40, 568
XapI RAATTY 2 cut(s) 715, 769
XmiI GTMKAC 2 cut(s) 576, 722
XmnI GAANNNNTTC 1 cut(s) 14
XspI CTAG 1 cut(s) 704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.