Rmu_sc0006936.1_g000016

Belongs to the glycosyltransferase 1 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006936.1
Physical Location & Seq
Reverse (-)
61685 .. 64764
3080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006936.1_g000016.1.cds

Sequence Viewer

Length: 1863 bp
atgaagaggatcgaggctgaggagctggctttggatgctgctgaaatggtggtgactagtactaggcaagagattgaagagcagtggggactgtatgatgggttcgatctcaagttagagaggaagctcagggttaggagacgccgaggagttagttgccttggacgatacatgccaagaatggtggtaatgcgatttttcactaatcctcacaagcccactatacttgcattgtctcgtcctgacccaaagaaaaatgttactacattgctgaaggcctttggggaatgcaaaccgcttcgggagctagccaacctggcactgatacttggtaacagagatgacattgaagaaatgccaaatagcagctcggttgttctaacaactgtgctcaagctgatcgacaggtatgatctgtatggtcaagtggcctatcctaaacatcacaagcaatcagatgtccctgacatatatcgtctagctgcaaaaacaaagggagtgtttatcaacccagctcttgtggaacctttcggtctcactattatagaggcagctgcttatggtttaccagtggttgccaccagaaacggaggacctgtggacattctgaaggcactaaacaatggcctcctagttgacccacatgaccagaaggccatagaagaagcactgctaaagcttgttgcagataaaaacctctggttggaatgcagaaagaatggcctaaagaacatccaccgcttttcgtggccagaacactgccgaaattacctctcccatgttgaacactcccgaaaccgccaccctaccacccgccttcagatcgtaccaattcctgaagaaccaatgagtgactctctaaaagacgtggatgacctttctttgagattctctgtagacggagatttcaagcataatggtgagcttgatgcagcaactagacagagggaactcattgaagccataacaaaaatggcttcatccaatagcaatgctggtgctacttactgtcctggtaggaggcagaggctgtttgtaatagccgtggactgttatgaccagaatggagatggtactcagacgtttcaggaaattataatgagtgtcaagaaagcagcaagcttaggatttggccagggtcgtgtaggcttcgtattgttaactagttccagcttacaagaaaccgtgaaggcatttaaagggtgccaagtaagcatagaagaatttgatgcggtggtctgcaaaagtggcagtgaaatgtattacccatggagagatttggcagctgatgcagattttgaaagtcatatcgagtacagatggcctggagagaatgtgaggtccatggtgccaaggctggccattttagatggtggggctgaggatgacatcacggagtatggaggatcaagtagctcaaggtgctactcttataatgtgaaaccaggagccaagactcggcgaatcgatgacctgcgccaaaggctgcggatgcgaggcttccgatgcaaccttttctacactcgtgcagcatcaaggttaaatgttgtaccactctttgcatcgagagtacaagcactgagatatctttcggtcaggtggggaactgatttatccaaagtggttatgtttgtgggggaaaaaggagatacagataatgaagacctgctggctggcctccataagacactagttttaagaggatccgttgagtatggcagtgagaagcttcttcacagtgaagatggtttcagaagagatgatgtagtcccacaagatagccccaacattgcccttgtagagagctatcaaccccacgatatctcagccactcttgaagctcttgggataaagggactttag

Protein Analysis

620

Amino Acids

69.71

Weight (kDa)

7.59

Isoelectric Point (pI)

52.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1097, 1434
Acc36I ACCTGC 2 cut(s) 1482, 1674
AccB1I GGYRCC 2 cut(s) 1203, 1348
AccI GTMKAC 1 cut(s) 897
AciI CCGC 6 cut(s) 296, 739, 799, 814, 1232, 1489
AclWI GGATC 4 cut(s) 17, 1414, 1698, 1711
AcoI YGGCCR 3 cut(s) 749, 1132, 1359
AcsI RAATTY 1 cut(s) 1223
AcuI CTGAAG 4 cut(s) 293, 629, 803, 858
AcyI GRCGYC 1 cut(s) 142
AfaI GTAC 6 cut(s) 61, 828, 1075, 1316, 1551, 1572
AfiI CCNNNNNNNGG 2 cut(s) 703, 1458
AgsI TTSAA 7 cut(s) 77, 350, 785, 910, 959, 1301, 1838
AhlI ACTAGT 3 cut(s) 56, 1163, 1690
AjiI CACGTC 1 cut(s) 868
AjnI CCWGG 5 cut(s) 315, 1012, 1134, 1324, 1444
Alw21I GWGCWC 1 cut(s) 393
Alw26I GTCTC 3 cut(s) 133, 240, 539
AlwI GGATC 4 cut(s) 17, 1414, 1698, 1711
AlwNI CAGNNNCTG 1 cut(s) 1030
ApoI RAATTY 1 cut(s) 1223
AspLEI GCGC 1 cut(s) 1479
AspS9I GGNCC 2 cut(s) 593, 1341
AsuHPI GGTGA 2 cut(s) 64, 932
AsuNHI GCTAGC 1 cut(s) 307
AvaII GGWCC 2 cut(s) 593, 1341
BalI TGGCCA 3 cut(s) 751, 1134, 1361
BamHI GGATCC 1 cut(s) 1703
BanI GGYRCC 2 cut(s) 1203, 1348
BauI CACGAG 1 cut(s) 1524
BbsI GAAGAC 1 cut(s) 1668
Bbv12I GWGCWC 1 cut(s) 393
BbvCI CCTCAGC 2 cut(s) 18, 1380
BccI CCATC 5 cut(s) 92, 1064, 1314, 1364, 1739
BceAI ACGGC 1 cut(s) 1028
BciT130I CCWGG 5 cut(s) 317, 1014, 1136, 1326, 1446
BcoDI GTCTC 3 cut(s) 133, 240, 539
BcuI ACTAGT 3 cut(s) 56, 1163, 1690
BfaI CTAG 8 cut(s) 57, 63, 308, 479, 632, 939, 1164, 1691
BfmI CTRYAG 1 cut(s) 894
BfuAI ACCTGC 2 cut(s) 1482, 1674
BglI GCCNNNNNGGC 1 cut(s) 317
BmcAI AGTACT 1 cut(s) 61
Bme1390I CCNGG 5 cut(s) 317, 1014, 1136, 1326, 1446
Bme18I GGWCC 2 cut(s) 593, 1341
BmgBI CACGTC 1 cut(s) 868
BmgT120I GGNCC 2 cut(s) 593, 1341
BmiI GGNNCC 5 cut(s) 525, 1205, 1350, 1450, 1705
BmrFI CCNGG 5 cut(s) 317, 1014, 1136, 1326, 1446
BmsI GCATC 8 cut(s) 25, 919, 1219, 1279, 1482, 1496, 1541, 1571
BmtI GCTAGC 1 cut(s) 311
BpiI GAAGAC 1 cut(s) 1668
BplI GAGNNNNNCTC 2 cut(s) 841, 873
BpmI CTGGAG 1 cut(s) 1347
Bpu10I CCTNAGC 4 cut(s) 18, 128, 1123, 1380
BpuEI CTTGAG 3 cut(s) 95, 377, 1402
Bsa29I ATCGAT 1 cut(s) 1467
BsaHI GRCGYC 1 cut(s) 142
BsaI GGTCTC 1 cut(s) 539
BsaJI CCNNGG 7 cut(s) 145, 160, 1044, 1135, 1268, 1344, 1352
BsaXI ACNNNNNCTCC 4 cut(s) 582, 612, 1320, 1350
Bsc4I CCNNNNNNNGG 2 cut(s) 703, 1458
Bse1I ACTGG 1 cut(s) 569
Bse3DI GCAATG 3 cut(s) 266, 997, 1788
BseBI CCWGG 5 cut(s) 317, 1014, 1136, 1326, 1446
BseCI ATCGAT 1 cut(s) 1467
BseDI CCNNGG 7 cut(s) 145, 160, 1044, 1135, 1268, 1344, 1352
BseGI GGATG 6 cut(s) 40, 732, 877, 980, 1390, 1497
BseLI CCNNNNNNNGG 2 cut(s) 703, 1458
BseMI GCAATG 3 cut(s) 266, 997, 1788
BseMII CTCAG 6 cut(s) 9, 142, 1091, 1371, 1571, 1839
BseNI ACTGG 1 cut(s) 569
BseRI GAGGAG 2 cut(s) 35, 162
BseYI CCCAGC 1 cut(s) 511
BsgI GTGCAG 1 cut(s) 1548
BshNI GGYRCC 2 cut(s) 1203, 1348
BshVI ATCGAT 1 cut(s) 1467
BsiHKAI GWGCWC 1 cut(s) 393
BslFI GGGAC 3 cut(s) 102, 446, 1754
BslI CCNNNNNNNGG 2 cut(s) 703, 1458
BsmAI GTCTC 3 cut(s) 133, 240, 539
BsmBI CGTCTC 1 cut(s) 133
BsmFI GGGAC 3 cut(s) 102, 446, 1754
BsmI GAATGC 2 cut(s) 293, 713
Bso31I GGTCTC 1 cut(s) 539
Bsp1286I GDGCHC 1 cut(s) 393
Bsp143I GATC 7 cut(s) 9, 106, 399, 412, 822, 1406, 1703
Bsp19I CCATGG 2 cut(s) 1268, 1344
BspACI CCGC 6 cut(s) 296, 739, 799, 814, 1232, 1489
BspCNI CTCAG 6 cut(s) 10, 141, 1090, 1372, 1572, 1838
BspDI ATCGAT 1 cut(s) 1467
BspLI GGNNCC 5 cut(s) 525, 1205, 1350, 1450, 1705
BspMI ACCTGC 2 cut(s) 1482, 1674
BspOI GCTAGC 1 cut(s) 311
BspPI GGATC 4 cut(s) 17, 1414, 1698, 1711
BspQI GCTCTTC 1 cut(s) 72
BspT107I GGYRCC 2 cut(s) 1203, 1348
BspTNI GGTCTC 1 cut(s) 539
BsrDI GCAATG 3 cut(s) 266, 997, 1788
BsrI ACTGG 1 cut(s) 569
BssECI CCNNGG 7 cut(s) 145, 160, 1044, 1135, 1268, 1344, 1352
BssMI GATC 7 cut(s) 9, 106, 399, 412, 822, 1406, 1703
BssNI GRCGYC 1 cut(s) 142
BssSI CACGAG 1 cut(s) 1524
BssT1I CCWWGG 4 cut(s) 160, 1268, 1344, 1352
Bst2BI CACGAG 1 cut(s) 1524
Bst2UI CCWGG 5 cut(s) 317, 1014, 1136, 1326, 1446
Bst4CI ACNGT 6 cut(s) 93, 388, 1010, 1052, 1186, 1739
Bst6I CTCTTC 2 cut(s) 72, 1750
BstACI GRCGYC 1 cut(s) 142
BstAPI GCANNNNNTGC 1 cut(s) 1289
BstC8I GCNNGC 6 cut(s) 27, 309, 1120, 1359, 1671, 1675
BstDEI CTNAG 7 cut(s) 18, 128, 1077, 1123, 1380, 1580, 1825
BstDSI CCRYGG 3 cut(s) 1044, 1268, 1344
BstF5I GGATG 6 cut(s) 40, 732, 877, 980, 1390, 1497
BstHHI GCGC 1 cut(s) 1479
BstKTI GATC 7 cut(s) 12, 109, 402, 415, 825, 1409, 1706
BstMAI GTCTC 3 cut(s) 133, 240, 539
BstMBI GATC 7 cut(s) 9, 106, 399, 412, 822, 1406, 1703
BstNI CCWGG 5 cut(s) 317, 1014, 1136, 1326, 1446
BstNSI RCATGY 1 cut(s) 175
BstSCI CCNGG 5 cut(s) 315, 1012, 1134, 1324, 1444
BstSFI CTRYAG 1 cut(s) 894
BstV2I GAAGAC 1 cut(s) 1668
BstX2I RGATCY 1 cut(s) 1703
BstYI RGATCY 1 cut(s) 1703
Bsu15I ATCGAT 1 cut(s) 1467
BsuTUI ATCGAT 1 cut(s) 1467
BtgI CCRYGG 3 cut(s) 1044, 1268, 1344
BtrI CACGTC 1 cut(s) 868
BtsCI GGATG 6 cut(s) 40, 732, 877, 980, 1390, 1497
BtsI GCAGTG 5 cut(s) 89, 668, 757, 1258, 1726
BtsIMutI CAGTG 9 cut(s) 89, 320, 576, 668, 757, 1258, 1577, 1726, 1744
BveI ACCTGC 2 cut(s) 1482, 1674
Cac8I GCNNGC 6 cut(s) 27, 309, 1120, 1359, 1671, 1675
CaiI CAGNNNCTG 1 cut(s) 1030
CfoI GCGC 1 cut(s) 1479
Cfr13I GGNCC 2 cut(s) 593, 1341
ClaI ATCGAT 1 cut(s) 1467
CseI GACGC 1 cut(s) 150
Csp6I GTAC 6 cut(s) 60, 827, 1074, 1315, 1550, 1571
CspCI CAANNNNNGTGG 4 cut(s) 165, 200, 208, 243
CviAII CATG 5 cut(s) 172, 644, 779, 1269, 1345
CviQI GTAC 6 cut(s) 60, 827, 1074, 1315, 1550, 1571
DdeI CTNAG 7 cut(s) 18, 128, 1077, 1123, 1380, 1580, 1825
DpnI GATC 7 cut(s) 11, 108, 401, 414, 824, 1408, 1705
DpnII GATC 7 cut(s) 9, 106, 399, 412, 822, 1406, 1703
DraI TTTAAA 1 cut(s) 1198
EaeI YGGCCR 3 cut(s) 749, 1132, 1359
Eam1104I CTCTTC 2 cut(s) 72, 1750
EarI CTCTTC 2 cut(s) 72, 1750
Eco130I CCWWGG 4 cut(s) 160, 1268, 1344, 1352
Eco147I AGGCCT 1 cut(s) 278
Eco31I GGTCTC 1 cut(s) 539
Eco32I GATATC 2 cut(s) 1586, 1822
Eco47I GGWCC 2 cut(s) 593, 1341
Eco57I CTGAAG 4 cut(s) 293, 629, 803, 858
EcoO109I RGGNCCY 1 cut(s) 593
EcoRII CCWGG 5 cut(s) 315, 1012, 1134, 1324, 1444
EcoRV GATATC 2 cut(s) 1586, 1822
EcoT14I CCWWGG 4 cut(s) 160, 1268, 1344, 1352
ErhI CCWWGG 4 cut(s) 160, 1268, 1344, 1352
Esp3I CGTCTC 1 cut(s) 133
FaeI CATG 5 cut(s) 175, 647, 782, 1272, 1348
FaqI GGGAC 3 cut(s) 102, 446, 1754
FatI CATG 5 cut(s) 171, 643, 778, 1268, 1344
FauI CCCGC 1 cut(s) 821
FblI GTMKAC 1 cut(s) 897
FokI GGATG 6 cut(s) 47, 719, 884, 967, 1397, 1504
FspBI CTAG 8 cut(s) 57, 63, 308, 479, 632, 939, 1164, 1691
GlaI GCGC 1 cut(s) 1478
GsaI CCCAGC 1 cut(s) 515
GsuI CTGGAG 1 cut(s) 1347
HgaI GACGC 1 cut(s) 150
HhaI GCGC 1 cut(s) 1479
Hin1I GRCGYC 1 cut(s) 142
Hin1II CATG 5 cut(s) 175, 647, 782, 1272, 1348
Hin6I GCGC 1 cut(s) 1477
HinP1I GCGC 1 cut(s) 1477
HincII GTYRAC 2 cut(s) 637, 1161
HindII GTYRAC 2 cut(s) 637, 1161
HindIII AAGCTT 3 cut(s) 677, 1120, 1727
HinfI GANTC 4 cut(s) 854, 888, 1456, 1464
HpaI GTTAAC 1 cut(s) 1161
HphI GGTGA 2 cut(s) 64, 932
Hpy166II GTNNAC 6 cut(s) 566, 601, 637, 898, 1048, 1161
Hpy188I TCNGA 6 cut(s) 457, 609, 822, 1080, 1505, 1754
Hpy188III TCNNGA 8 cut(s) 242, 302, 792, 836, 1088, 1108, 1566, 1835
Hpy8I GTNNAC 6 cut(s) 566, 601, 637, 898, 1048, 1161
HpyAV CCTTC 5 cut(s) 268, 604, 646, 827, 1183
HpyCH4III ACNGT 6 cut(s) 93, 388, 1010, 1052, 1186, 1739
HpyCH4IV ACGT 2 cut(s) 867, 1082
HpyF3I CTNAG 7 cut(s) 18, 128, 1077, 1123, 1380, 1580, 1825
HpySE526I ACGT 2 cut(s) 867, 1082
Hsp92I GRCGYC 1 cut(s) 142
Hsp92II CATG 5 cut(s) 175, 647, 782, 1272, 1348
HspAI GCGC 1 cut(s) 1477
KspAI GTTAAC 1 cut(s) 1161
Kzo9I GATC 7 cut(s) 9, 106, 399, 412, 822, 1406, 1703
LguI GCTCTTC 1 cut(s) 72
LmnI GCTCC 3 cut(s) 22, 304, 1448
LweI GCATC 8 cut(s) 25, 919, 1219, 1279, 1482, 1496, 1541, 1571
MaeI CTAG 8 cut(s) 57, 63, 308, 479, 632, 939, 1164, 1691
MaeII ACGT 2 cut(s) 867, 1082
MaeIII GTNAC 4 cut(s) 52, 259, 332, 851
MalI GATC 7 cut(s) 11, 108, 401, 414, 824, 1408, 1705
MboI GATC 7 cut(s) 9, 106, 399, 412, 822, 1406, 1703
MflI RGATCY 1 cut(s) 1703
MhlI GDGCHC 1 cut(s) 393
MlsI TGGCCA 3 cut(s) 751, 1134, 1361
MluCI AATT 4 cut(s) 766, 831, 1092, 1223
MluNI TGGCCA 3 cut(s) 751, 1134, 1361
MlyI GAGTC 2 cut(s) 848, 1450
MmeI TCCRAC 1 cut(s) 684
Mox20I TGGCCA 3 cut(s) 751, 1134, 1361
MscI TGGCCA 3 cut(s) 751, 1134, 1361
MseI TTAA 4 cut(s) 1160, 1197, 1541, 1697
MslI CAYNNNNRTG 1 cut(s) 918
Msp20I TGGCCA 3 cut(s) 751, 1134, 1361
MspA1I CMGCKG 2 cut(s) 554, 1286
MspR9I CCNGG 5 cut(s) 317, 1014, 1136, 1326, 1446
Mva1269I GAATGC 2 cut(s) 293, 713
MvaI CCWGG 5 cut(s) 317, 1014, 1136, 1326, 1446
NcoI CCATGG 2 cut(s) 1268, 1344
NdeII GATC 7 cut(s) 9, 106, 399, 412, 822, 1406, 1703
NheI GCTAGC 1 cut(s) 307
NlaIII CATG 5 cut(s) 175, 647, 782, 1272, 1348
NlaIV GGNNCC 5 cut(s) 525, 1205, 1350, 1450, 1705
NmeAIII GCCGAG 2 cut(s) 170, 1438
NmuCI GTSAC 2 cut(s) 52, 851
NspI RCATGY 1 cut(s) 175
PceI AGGCCT 1 cut(s) 278
PciSI GCTCTTC 1 cut(s) 72
PctI GAATGC 2 cut(s) 293, 713
PfeI GAWTC 2 cut(s) 888, 1464
PleI GAGTC 2 cut(s) 848, 1450
PpsI GAGTC 2 cut(s) 848, 1450
PpuMI RGGWCCY 1 cut(s) 593
PsiI TTATAA 2 cut(s) 1097, 1434
Psp5II RGGWCCY 1 cut(s) 593
Psp6I CCWGG 5 cut(s) 315, 1012, 1134, 1324, 1444
PspFI CCCAGC 1 cut(s) 511
PspGI CCWGG 5 cut(s) 315, 1012, 1134, 1324, 1444
PspN4I GGNNCC 5 cut(s) 525, 1205, 1350, 1450, 1705
PspPI GGNCC 2 cut(s) 593, 1341
PspPPI RGGWCCY 1 cut(s) 593
PsrI GAACNNNNNNTAC 2 cut(s) 86, 118
PstNI CAGNNNCTG 1 cut(s) 1030
PsuI RGATCY 1 cut(s) 1703
PvuII CAGCTG 2 cut(s) 554, 1286
RsaI GTAC 6 cut(s) 61, 828, 1075, 1316, 1551, 1572
RsaNI GTAC 6 cut(s) 60, 827, 1074, 1315, 1550, 1571
RseI CAYNNNNRTG 1 cut(s) 918
SapI GCTCTTC 1 cut(s) 72
SaqAI TTAA 4 cut(s) 1160, 1197, 1541, 1697
Sau3AI GATC 7 cut(s) 9, 106, 399, 412, 822, 1406, 1703
Sau96I GGNCC 2 cut(s) 593, 1341
ScaI AGTACT 1 cut(s) 61
SchI GAGTC 2 cut(s) 848, 1450
ScrFI CCNGG 5 cut(s) 317, 1014, 1136, 1326, 1446
SduI GDGCHC 1 cut(s) 393
SfaNI GCATC 8 cut(s) 25, 919, 1219, 1279, 1482, 1496, 1541, 1571
SfcI CTRYAG 1 cut(s) 894
SinI GGWCC 2 cut(s) 593, 1341
SmiMI CAYNNNNRTG 1 cut(s) 918
SmlI CTYRAG 3 cut(s) 110, 392, 1417
SmoI CTYRAG 3 cut(s) 110, 392, 1417
SpeI ACTAGT 3 cut(s) 56, 1163, 1690
Sse9I AATT 4 cut(s) 766, 831, 1092, 1223
SseBI AGGCCT 1 cut(s) 278
SsiI CCGC 6 cut(s) 296, 739, 799, 814, 1232, 1489
SspMI CTAG 8 cut(s) 57, 63, 308, 479, 632, 939, 1164, 1691
StuI AGGCCT 1 cut(s) 278
StyD4I CCNGG 5 cut(s) 315, 1012, 1134, 1324, 1444
StyI CCWWGG 4 cut(s) 160, 1268, 1344, 1352
TaaI ACNGT 6 cut(s) 93, 388, 1010, 1052, 1186, 1739
TaiI ACGT 2 cut(s) 870, 1085
TaqI TCGA 6 cut(s) 12, 105, 402, 1311, 1467, 1565
TaqII GACCGA 2 cut(s) 521, 1582
TasI AATT 4 cut(s) 766, 831, 1092, 1223
TatI WGTACW 3 cut(s) 59, 1314, 1570
TfiI GAWTC 2 cut(s) 888, 1464
Tru1I TTAA 4 cut(s) 1160, 1197, 1541, 1697
Tru9I TTAA 4 cut(s) 1160, 1197, 1541, 1697
TscAI CASTG 9 cut(s) 89, 327, 576, 675, 764, 1258, 1584, 1726, 1744
TseFI GTSAC 2 cut(s) 52, 851
Tsp45I GTSAC 2 cut(s) 52, 851
TspDTI ATGAA 3 cut(s) 17, 969, 1674
TspGWI ACGGA 4 cut(s) 603, 915, 1409, 1696
TspRI CASTG 9 cut(s) 89, 327, 576, 675, 764, 1258, 1584, 1726, 1744
VpaK11BI GGWCC 2 cut(s) 593, 1341
XapI RAATTY 1 cut(s) 1223
XceI RCATGY 1 cut(s) 175
XcmI CCANNNNNNNNNTGG 2 cut(s) 970, 1067
XmiI GTMKAC 1 cut(s) 897
XspI CTAG 8 cut(s) 57, 63, 308, 479, 632, 939, 1164, 1691
ZrmI AGTACT 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.