Rw6G000450

Belongs to the glycosyltransferase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0006699
Physical Location & Seq
Reverse (-)
804835 .. 810929
6095 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G000450.1

Sequence Viewer

Length: 3075 bp
ATGGCGGGAAACGACTGGTTAAACGGTTATCTCGAGGCGATTCTGGATGCAGGAATTAACACAAGGAAAACGAACGATGGGAAGCAGAAGATTGCCAAGTTTGAAGAGCAAGTCAAGGAGGAGAAGTTGTTTAGTCCCACAAAGTACTTCGTGGAAGAAGTTGTTAGCAGCTTTGATGAGTCTGACCTCCACAGGACATGGGTTAAGGTAGTAGCTACCAGGAATACCCGTGAACGCAGCAATAGGCTTGAGAATATGTGCTGGCGCATTTGGCATCTCGCTCGTAAGAAGAAACAGATAGCATGGGATGATGCTCGCAGACTTGCAAGACGACGTCTGGAGAGGGAGCAAGGCCGCCATGATGCTGCGGAGGACCTTTCAGAGCTGTCTGAAGGGGAGAAGGAAAAAGGTGACACCAATTTTACAGAACCGCCTGTCAAGCAAATTGCAAGAATCAACTCAGAAATGCGATTGTGGTCTGAGGATGATAACAAGACTAGGCATCTTTACATTGTCTTAATCAGTATGCATGGGTTGGTTCGTGGAGAAAACATGGAACTTGGAAGAGATTCTGATACAGGTGGTCAGGTGAAGTATGTAGTGGAACTTGCTCGTGCTCTGGCCAATACAAAAGGAGTCTATAGAGTTGATCTGTTAACAAGGCAAATCACTTCACCGGAGGTAGACTCCAGCTACGGTGAACCTAATGAGATGCTCATTTGCCCACCTGATGGCAGCGGGAGCTGTGGAGCCTACATTGTCCGCCTTCCATGTGGACCCCGCGACAAGTACATACCGAAAGAGTCACTATGGCCTCACATACCTGAATTTATTGATGGGGCTCTCGGCCACATTGTGAACATGGCAAGAGCTCTAGGCGATGAGGTCAATGGTGGGAAACCAACATGGCCTTATGTCATCCACGGCCACTATGCTGATGCAGGGGAGGTGGCTGCTCAGTTGTCTGGTGCCTTGAATGTGCCAATGGTGCTGACGGGGCATTCCCTAGGAAGAAACAAGTTTGAACAACTGCTCAAACAGGGGAGATTGTCGAGGGAGGACATCAATGCAACCTACAAGATTATGAAGAGGATCGAGGCTGAGGAGCTGGCTTTGGATGCTGCTGAAATGGTGGTGACTAGTACTAGGCAAGAGATTGAAGAGCAGTGGGGACTGTATGATGGGTTCGATCTCAAGTTAGAGAGGAAGCTCAGGGTTAGGAGACGCCGAGGAGTTAGTTGCCTTGGACGATACATGCCAAGAATGGTGGTTATACCGCCAGGCATGGACTTCAGCTATGTTACAGTGCAAGATACTGAAGGAGATGGAGATCTCAAATCCCTGATTGGTTCTGACAGAGCTCAAAGCAAAAGGAATCTCCCTCCAATATGGTCTGAGGTAATGCGATTTTTCACTAATCCTCACAAGCCCACTATACTTGCATTGTCTCGTCCTGACCCAAAGAAAAATGTTACTACATTGCTGAAGGCCTTTGGGGAATGCAAACCGCTTCGGGAGCTAGCCAACCTGGCACTGATACTTGGTAACAGAGATGACATTGAAGAAATGGCAAATAGCAGCTCGGTTGTTCTAACAACTGTGCTCAAGCTGATCGACAGGTATGATCTGTATGGTCAAGTGGCCTATCCTAAACATCACAAGCAATCAGATGTCCCTGACATATATCGTCTAGCTGCAAAAACAAAGGGAGTGTTTATCAACCCAGCTCTTGTGGAACCTTTCGGTCTCACTATTATAGAGGCAGCTGCTTATGGTTTACCAGTGGTTGCCACCAGAAACGGAGGACCTGTGGACATTCTGAAGGCACTAAACAATGGCCTCCTAGTTGACCCACATGACCAGAAGGCCATAGAAGAAGCACTGCTAAAGCTTGTTGCAGATAAAAACCTCTGGTTGGAATGCAGAAAGAATGGCCTAAAGAACATCCACCGCTTTTCGTGGCCAGAACACTGCCGAAATTACCTCTCCCATGTTGAACACTCCCGAAACCGCCACCCTACCACCCGCCTTCAGATCGTACCAATTCCTGAAGAACCAATGAGTGACTCTCTAAAAGACGTGGATGACCTTTCTTTGAGATTCTCTGTAGACGGAGATTTCAAGCATAATGGTGAGCTTGATGCAGCAACTAGACAGAGGGAACTCATTGAAGCCATAACAAAAATGGCTTCATCCAATAGCAATGCTGGTGCTACTTACTGTCCTGGTAGGAGGCAGAGGCTGTTTGTAATAGCCGTGGACTGTTATGACCAGAATGGAGATGGTACTCAGACGTTTCAGGAAATTATAATGAGTGTCAAGAAAGCAGCAAGCTTAGGATTTGGCCAGGGTCGTGTAGGCTTCGTATTGTTAACTAGTTCCAGCTTACAAGAAACCGTGAAGGCATTTAAAGGGTGCCAAGTAAGCATAGAAGAATTTGATGCGGTGGTCTGCAAAAGTGGCAGTGAAATGTATTACCCATGGAGAGATTTGGCAGCTGATGCAGATTTTGAAAGTCATATCGAGTACAGATGGCCTGGAGAGAATGTGAGGTCCATGGTGCCAAGGCTGGCCATTTTAGATGGTGGGGCTGAGGATGACATCACGGAGTATGGAGGATCAAGTAGCTCAAGGTGCTACTCTTATAATGTGAAACCAGGAGCCAAGACTCGGCGAATCGATGACCTGCGCCAAAGGCTGCGGATGCGAGGCTTCCGATGCAACCTTTTCTACACTCGTGCAGCATCAAGGTTAAATGTTGTACCACTCTTTGCATCGAGAGTACAAGCACTGAGATATCTTTCGGTCAGGTGGGGAACTGATTTATCCAAAGTGGTTATGTTTGTGGGGGAAAAAGGAGATACAGATAATGAAGACCTGCTGGCTGGCCTCCATAAGACACTAGTTTTAAGAGGATCCGTTGAGTATGGCAGTGAGAAGCTTCTTCACAGTGAAGATGGTTTCAGAAGAGATGATGTAGTCCCACAAGATAGCCCCAACATTGCCCTTGTAGAGAGCTATCAACCCCACGATATCTCAGCCACTCTTGAAGCTCTTGGGATAAAGGGACTTTAG

Protein Analysis

1024

Amino Acids

115.31

Weight (kDa)

6.7

Isoelectric Point (pI)

47.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_trans_4_4 PF13579 194 - 387 1.5e-07 Glycosyl transferase 4-like domain
GT-B_Sucrose_synth PF00862 263 - 432 3e-06 Sucrose synthase first GT-B domain
Glycos_transf_1 PF00534 473 - 646 2.4e-24 Glycosyl transferases group 1
Glyco_trans_1_4 PF13692 477 - 634 7.5e-17 Glycosyl transferases group 1
S6PP PF05116 784 - 955 5e-16 Sucrose-6F-phosphate phosphohydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2309, 2646
AatII GACGTC 1 cut(s) 337
Acc36I ACCTGC 2 cut(s) 2694, 2886
AccB1I GGYRCC 3 cut(s) 968, 2415, 2560
AccB7I CCANNNNNTGG 1 cut(s) 731
AccI GTMKAC 2 cut(s) 684, 2109
AccII CGCG 1 cut(s) 783
AclWI GGATC 4 cut(s) 1100, 2626, 2910, 2923
AcoI YGGCCR 6 cut(s) 621, 847, 925, 1961, 2344, 2571
AcsI RAATTY 2 cut(s) 827, 2435
AcuI CTGAAG 7 cut(s) 411, 1276, 1338, 1505, 1841, 2015, 2070
AcyI GRCGYC 2 cut(s) 334, 1225
AdeI CACNNNGTG 1 cut(s) 856
AfaI GTAC 8 cut(s) 146, 791, 1144, 2040, 2287, 2528, 2763, 2784
AfiI CCNNNNNNNGG 3 cut(s) 731, 1915, 2670
AhlI ACTAGT 3 cut(s) 1139, 2375, 2902
AjiI CACGTC 1 cut(s) 2080
AjnI CCWGG 7 cut(s) 218, 1279, 1527, 2224, 2346, 2536, 2656
Alw21I GWGCWC 4 cut(s) 619, 874, 1363, 1605
Alw26I GTCTC 3 cut(s) 1216, 1452, 1751
AlwI GGATC 4 cut(s) 1100, 2626, 2910, 2923
AlwNI CAGNNNCTG 1 cut(s) 2242
Ama87I CYCGRG 1 cut(s) 32
ApoI RAATTY 2 cut(s) 827, 2435
Asp700I GAANNNNTTC 1 cut(s) 568
AspA2I CCTAGG 1 cut(s) 1006
AspLEI GCGC 2 cut(s) 267, 2691
AspS9I GGNCC 4 cut(s) 373, 776, 1805, 2553
AsuHPI GGTGA 6 cut(s) 422, 601, 666, 710, 1147, 2144
AsuNHI GCTAGC 1 cut(s) 1519
AvaI CYCGRG 1 cut(s) 32
AvaII GGWCC 4 cut(s) 373, 776, 1805, 2553
AvrII CCTAGG 1 cut(s) 1006
BalI TGGCCA 4 cut(s) 623, 1963, 2346, 2573
BamHI GGATCC 1 cut(s) 2915
BanI GGYRCC 3 cut(s) 968, 2415, 2560
BanII GRGCYC 3 cut(s) 844, 874, 1363
BauI CACGAG 2 cut(s) 612, 2736
BbsI GAAGAC 1 cut(s) 2880
Bbv12I GWGCWC 4 cut(s) 619, 874, 1363, 1605
BbvCI CCTCAGC 2 cut(s) 1101, 2592
BccI CCATC 9 cut(s) 71, 725, 830, 1175, 1319, 2276, 2526, 2576, 2951
BceAI ACGGC 2 cut(s) 940, 2240
BcgI CGANNNNNNTGC 2 cut(s) 263, 297
BciT130I CCWGG 7 cut(s) 220, 1281, 1529, 2226, 2348, 2538, 2658
BcoDI GTCTC 3 cut(s) 1216, 1452, 1751
BcuI ACTAGT 3 cut(s) 1139, 2375, 2902
BfmI CTRYAG 2 cut(s) 640, 2106
BfuAI ACCTGC 2 cut(s) 2694, 2886
BglI GCCNNNNNGGC 1 cut(s) 1529
BglII AGATCT 1 cut(s) 1330
BlnI CCTAGG 1 cut(s) 1006
BmcAI AGTACT 2 cut(s) 146, 1144
Bme1390I CCNGG 7 cut(s) 220, 1281, 1529, 2226, 2348, 2538, 2658
Bme18I GGWCC 4 cut(s) 373, 776, 1805, 2553
BmeT110I CYCGRG 1 cut(s) 32
BmgBI CACGTC 1 cut(s) 2080
BmgT120I GGNCC 4 cut(s) 373, 776, 1805, 2553
BmiI GGNNCC 8 cut(s) 751, 778, 970, 1737, 2417, 2562, 2662, 2917
BmrFI CCNGG 7 cut(s) 220, 1281, 1529, 2226, 2348, 2538, 2658
BmtI GCTAGC 1 cut(s) 1523
BpiI GAAGAC 1 cut(s) 2880
BplI GAGNNNNNCTC 4 cut(s) 671, 703, 2053, 2085
BpmI CTGGAG 3 cut(s) 359, 673, 2559
Bpu10I CCTNAGC 4 cut(s) 1101, 1211, 2335, 2592
BpuEI CTTGAG 4 cut(s) 269, 1178, 1589, 2614
Bsa29I ATCGAT 1 cut(s) 2679
BsaBI GATNNNNATC 1 cut(s) 1329
BsaHI GRCGYC 2 cut(s) 334, 1225
BsaI GGTCTC 1 cut(s) 1751
BsaJI CCNNGG 9 cut(s) 922, 1006, 1228, 1243, 2256, 2347, 2480, 2556, 2564
BsaWI WCCGGW 1 cut(s) 676
BsaXI ACNNNNNCTCC 8 cut(s) 110, 113, 140, 143, 1794, 1824, 2532, 2562
Bsc4I CCNNNNNNNGG 3 cut(s) 731, 1915, 2670
Bse1I ACTGG 2 cut(s) 20, 1781
Bse3DI GCAATG 3 cut(s) 1478, 2209, 3000
Bse8I GATNNNNATC 1 cut(s) 1329
BseBI CCWGG 7 cut(s) 220, 1281, 1529, 2226, 2348, 2538, 2658
BseCI ATCGAT 1 cut(s) 2679
BseDI CCNNGG 9 cut(s) 922, 1006, 1228, 1243, 2256, 2347, 2480, 2556, 2564
BseJI GATNNNNATC 1 cut(s) 1329
BseLI CCNNNNNNNGG 3 cut(s) 731, 1915, 2670
BseMI GCAATG 3 cut(s) 1478, 2209, 3000
BseNI ACTGG 2 cut(s) 20, 1781
BseRI GAGGAG 3 cut(s) 134, 1118, 1245
BseYI CCCAGC 1 cut(s) 1723
BsgI GTGCAG 1 cut(s) 2760
Bsh1236I CGCG 1 cut(s) 783
BshNI GGYRCC 3 cut(s) 968, 2415, 2560
BshVI ATCGAT 1 cut(s) 2679
BsiHKAI GWGCWC 4 cut(s) 619, 874, 1363, 1605
BsiHKCI CYCGRG 1 cut(s) 32
BsiSI CCGG 1 cut(s) 677
BslFI GGGAC 4 cut(s) 120, 1185, 1658, 2966
BslI CCNNNNNNNGG 3 cut(s) 731, 1915, 2670
BsmAI GTCTC 3 cut(s) 1216, 1452, 1751
BsmBI CGTCTC 1 cut(s) 1216
BsmFI GGGAC 4 cut(s) 120, 1185, 1658, 2966
BsmI GAATGC 3 cut(s) 1000, 1505, 1925
Bso31I GGTCTC 1 cut(s) 1751
BsoBI CYCGRG 1 cut(s) 32
Bsp1286I GDGCHC 5 cut(s) 619, 844, 874, 1363, 1605
Bsp143I GATC 9 cut(s) 649, 1092, 1189, 1330, 1611, 1624, 2034, 2618, 2915
Bsp19I CCATGG 2 cut(s) 2480, 2556
BspDI ATCGAT 1 cut(s) 2679
BspFNI CGCG 1 cut(s) 783
BspLI GGNNCC 8 cut(s) 751, 778, 970, 1737, 2417, 2562, 2662, 2917
BspMI ACCTGC 2 cut(s) 2694, 2886
BspOI GCTAGC 1 cut(s) 1523
BspPI GGATC 4 cut(s) 1100, 2626, 2910, 2923
BspQI GCTCTTC 2 cut(s) 99, 1155
BspT107I GGYRCC 3 cut(s) 968, 2415, 2560
BspTNI GGTCTC 1 cut(s) 1751
BsrDI GCAATG 3 cut(s) 1478, 2209, 3000
BsrI ACTGG 2 cut(s) 20, 1781
BssECI CCNNGG 9 cut(s) 922, 1006, 1228, 1243, 2256, 2347, 2480, 2556, 2564
BssMI GATC 9 cut(s) 649, 1092, 1189, 1330, 1611, 1624, 2034, 2618, 2915
BssNI GRCGYC 2 cut(s) 334, 1225
BssSI CACGAG 2 cut(s) 612, 2736
BssT1I CCWWGG 5 cut(s) 1006, 1243, 2480, 2556, 2564
Bst2BI CACGAG 2 cut(s) 612, 2736
Bst2UI CCWGG 7 cut(s) 220, 1281, 1529, 2226, 2348, 2538, 2658
Bst4CI ACNGT 9 cut(s) 26, 698, 1176, 1306, 1600, 2222, 2264, 2398, 2951
Bst6I CTCTTC 5 cut(s) 99, 559, 1082, 1155, 2962
BstACI GRCGYC 2 cut(s) 334, 1225
BstAPI GCANNNNNTGC 1 cut(s) 2501
BstC8I GCNNGC 8 cut(s) 263, 316, 1110, 1521, 2332, 2571, 2883, 2887
BstDSI CCRYGG 4 cut(s) 922, 2256, 2480, 2556
BstFNI CGCG 1 cut(s) 783
BstHHI GCGC 2 cut(s) 267, 2691
BstKTI GATC 9 cut(s) 652, 1095, 1192, 1333, 1614, 1627, 2037, 2621, 2918
BstMAI GTCTC 3 cut(s) 1216, 1452, 1751
BstMBI GATC 9 cut(s) 649, 1092, 1189, 1330, 1611, 1624, 2034, 2618, 2915
BstNI CCWGG 7 cut(s) 220, 1281, 1529, 2226, 2348, 2538, 2658
BstNSI RCATGY 1 cut(s) 1258
BstSCI CCNGG 7 cut(s) 218, 1279, 1527, 2224, 2346, 2536, 2656
BstSFI CTRYAG 2 cut(s) 640, 2106
BstUI CGCG 1 cut(s) 783
BstV2I GAAGAC 1 cut(s) 2880
BstX2I RGATCY 2 cut(s) 1330, 2915
BstYI RGATCY 2 cut(s) 1330, 2915
Bsu15I ATCGAT 1 cut(s) 2679
BsuTUI ATCGAT 1 cut(s) 2679
BtgI CCRYGG 4 cut(s) 922, 2256, 2480, 2556
BtgZI GCGATG 1 cut(s) 894
BtrI CACGTC 1 cut(s) 2080
BtsI GCAGTG 5 cut(s) 1172, 1880, 1969, 2470, 2938
BveI ACCTGC 2 cut(s) 2694, 2886
Cac8I GCNNGC 8 cut(s) 263, 316, 1110, 1521, 2332, 2571, 2883, 2887
CaiI CAGNNNCTG 1 cut(s) 2242
CfoI GCGC 2 cut(s) 267, 2691
Cfr13I GGNCC 4 cut(s) 373, 776, 1805, 2553
ClaI ATCGAT 1 cut(s) 2679
CseI GACGC 1 cut(s) 1233
Csp6I GTAC 8 cut(s) 145, 790, 1143, 2039, 2286, 2527, 2762, 2783
CspCI CAANNNNNGTGG 4 cut(s) 1248, 1283, 1420, 1455
CviQI GTAC 8 cut(s) 145, 790, 1143, 2039, 2286, 2527, 2762, 2783
DpnI GATC 9 cut(s) 651, 1094, 1191, 1332, 1613, 1626, 2036, 2620, 2917
DpnII GATC 9 cut(s) 649, 1092, 1189, 1330, 1611, 1624, 2034, 2618, 2915
DraI TTTAAA 1 cut(s) 2410
DraIII CACNNNGTG 1 cut(s) 856
EaeI YGGCCR 6 cut(s) 621, 847, 925, 1961, 2344, 2571
Eam1104I CTCTTC 5 cut(s) 99, 559, 1082, 1155, 2962
EarI CTCTTC 5 cut(s) 99, 559, 1082, 1155, 2962
EciI GGCGGA 1 cut(s) 752
Ecl136II GAGCTC 2 cut(s) 872, 1361
Eco130I CCWWGG 5 cut(s) 1006, 1243, 2480, 2556, 2564
Eco147I AGGCCT 1 cut(s) 1490
Eco24I GRGCYC 3 cut(s) 844, 874, 1363
Eco31I GGTCTC 1 cut(s) 1751
Eco32I GATATC 2 cut(s) 2798, 3034
Eco47I GGWCC 4 cut(s) 373, 776, 1805, 2553
Eco53kI GAGCTC 2 cut(s) 872, 1361
Eco57I CTGAAG 7 cut(s) 411, 1276, 1338, 1505, 1841, 2015, 2070
Eco88I CYCGRG 1 cut(s) 32
EcoICRI GAGCTC 2 cut(s) 872, 1361
EcoO109I RGGNCCY 2 cut(s) 373, 1805
EcoRII CCWGG 7 cut(s) 218, 1279, 1527, 2224, 2346, 2536, 2656
EcoRV GATATC 2 cut(s) 2798, 3034
EcoT14I CCWWGG 5 cut(s) 1006, 1243, 2480, 2556, 2564
EcoT22I ATGCAT 1 cut(s) 531
EcoT38I GRGCYC 3 cut(s) 844, 874, 1363
ErhI CCWWGG 5 cut(s) 1006, 1243, 2480, 2556, 2564
Esp3I CGTCTC 1 cut(s) 1216
FaqI GGGAC 4 cut(s) 120, 1185, 1658, 2966
FauI CCCGC 3 cut(s) 731, 788, 2033
FblI GTMKAC 2 cut(s) 684, 2109
FriOI GRGCYC 3 cut(s) 844, 874, 1363
GlaI GCGC 2 cut(s) 266, 2690
GsaI CCCAGC 1 cut(s) 1727
GsuI CTGGAG 3 cut(s) 359, 673, 2559
HapII CCGG 1 cut(s) 677
HgaI GACGC 1 cut(s) 1233
HhaI GCGC 2 cut(s) 267, 2691
Hin1I GRCGYC 2 cut(s) 334, 1225
Hin6I GCGC 2 cut(s) 265, 2689
HinP1I GCGC 2 cut(s) 265, 2689
HincII GTYRAC 3 cut(s) 657, 1849, 2373
HindII GTYRAC 3 cut(s) 657, 1849, 2373
HindIII AAGCTT 3 cut(s) 1889, 2332, 2939
HpaI GTTAAC 2 cut(s) 657, 2373
HpaII CCGG 1 cut(s) 677
HphI GGTGA 6 cut(s) 422, 601, 666, 710, 1147, 2144
Hpy99I CGWCG 1 cut(s) 336
HpyAV CCTTC 9 cut(s) 386, 394, 776, 1313, 1480, 1816, 1858, 2039, 2395
HpyCH4III ACNGT 9 cut(s) 26, 698, 1176, 1306, 1600, 2222, 2264, 2398, 2951
HpyCH4IV ACGT 3 cut(s) 334, 2079, 2294
HpySE526I ACGT 3 cut(s) 334, 2079, 2294
Hsp92I GRCGYC 2 cut(s) 334, 1225
HspAI GCGC 2 cut(s) 265, 2689
KspAI GTTAAC 2 cut(s) 657, 2373
Kzo9I GATC 9 cut(s) 649, 1092, 1189, 1330, 1611, 1624, 2034, 2618, 2915
LguI GCTCTTC 2 cut(s) 99, 1155
LmnI GCTCC 6 cut(s) 346, 741, 749, 1105, 1516, 2660
MaeII ACGT 3 cut(s) 334, 2079, 2294
MaeIII GTNAC 7 cut(s) 410, 804, 1135, 1300, 1471, 1544, 2063
MalI GATC 9 cut(s) 651, 1094, 1191, 1332, 1613, 1626, 2036, 2620, 2917
MboI GATC 9 cut(s) 649, 1092, 1189, 1330, 1611, 1624, 2034, 2618, 2915
MflI RGATCY 2 cut(s) 1330, 2915
MhlI GDGCHC 5 cut(s) 619, 844, 874, 1363, 1605
MlsI TGGCCA 4 cut(s) 623, 1963, 2346, 2573
MluCI AATT 8 cut(s) 54, 418, 444, 827, 1978, 2043, 2304, 2435
MluNI TGGCCA 4 cut(s) 623, 1963, 2346, 2573
MlyI GAGTC 6 cut(s) 188, 645, 680, 812, 2060, 2662
MmeI TCCRAC 1 cut(s) 1896
Mox20I TGGCCA 4 cut(s) 623, 1963, 2346, 2573
Mph1103I ATGCAT 1 cut(s) 531
MroXI GAANNNNTTC 1 cut(s) 568
MscI TGGCCA 4 cut(s) 623, 1963, 2346, 2573
MseI TTAA 9 cut(s) 20, 57, 204, 518, 656, 2372, 2409, 2753, 2909
MslI CAYNNNNRTG 1 cut(s) 2130
Msp20I TGGCCA 4 cut(s) 623, 1963, 2346, 2573
MspA1I CMGCKG 3 cut(s) 738, 1766, 2498
MspI CCGG 1 cut(s) 677
MspR9I CCNGG 7 cut(s) 220, 1281, 1529, 2226, 2348, 2538, 2658
Mva1269I GAATGC 3 cut(s) 1000, 1505, 1925
MvaI CCWGG 7 cut(s) 220, 1281, 1529, 2226, 2348, 2538, 2658
MvnI CGCG 1 cut(s) 783
NcoI CCATGG 2 cut(s) 2480, 2556
NdeII GATC 9 cut(s) 649, 1092, 1189, 1330, 1611, 1624, 2034, 2618, 2915
NheI GCTAGC 1 cut(s) 1519
NlaIV GGNNCC 8 cut(s) 751, 778, 970, 1737, 2417, 2562, 2662, 2917
NmeAIII GCCGAG 3 cut(s) 825, 1253, 2650
NmuCI GTSAC 4 cut(s) 410, 804, 1135, 2063
NsiI ATGCAT 1 cut(s) 531
NspI RCATGY 1 cut(s) 1258
PaeR7I CTCGAG 1 cut(s) 32
PceI AGGCCT 1 cut(s) 1490
PciSI GCTCTTC 2 cut(s) 99, 1155
PcsI WCGNNNNNNNCGW 1 cut(s) 30
PctI GAATGC 3 cut(s) 1000, 1505, 1925
PdmI GAANNNNTTC 1 cut(s) 568
PfeI GAWTC 6 cut(s) 40, 453, 569, 1375, 2100, 2676
PflFI GACNNNGTC 1 cut(s) 333
PflMI CCANNNNNTGG 1 cut(s) 731
PleI GAGTC 6 cut(s) 187, 644, 680, 811, 2060, 2662
PpsI GAGTC 6 cut(s) 187, 644, 680, 811, 2060, 2662
PpuMI RGGWCCY 2 cut(s) 373, 1805
PsiI TTATAA 2 cut(s) 2309, 2646
Psp124BI GAGCTC 2 cut(s) 874, 1363
Psp5II RGGWCCY 2 cut(s) 373, 1805
Psp6I CCWGG 7 cut(s) 218, 1279, 1527, 2224, 2346, 2536, 2656
PspFI CCCAGC 1 cut(s) 1723
PspGI CCWGG 7 cut(s) 218, 1279, 1527, 2224, 2346, 2536, 2656
PspN4I GGNNCC 8 cut(s) 751, 778, 970, 1737, 2417, 2562, 2662, 2917
PspPI GGNCC 4 cut(s) 373, 776, 1805, 2553
PspPPI RGGWCCY 2 cut(s) 373, 1805
PsrI GAACNNNNNNTAC 2 cut(s) 1169, 1201
PstNI CAGNNNCTG 1 cut(s) 2242
PsuI RGATCY 2 cut(s) 1330, 2915
PsyI GACNNNGTC 1 cut(s) 333
PvuII CAGCTG 2 cut(s) 1766, 2498
RsaI GTAC 8 cut(s) 146, 791, 1144, 2040, 2287, 2528, 2763, 2784
RsaNI GTAC 8 cut(s) 145, 790, 1143, 2039, 2286, 2527, 2762, 2783
RseI CAYNNNNRTG 1 cut(s) 2130
SacI GAGCTC 2 cut(s) 874, 1363
SapI GCTCTTC 2 cut(s) 99, 1155
SaqAI TTAA 9 cut(s) 20, 57, 204, 518, 656, 2372, 2409, 2753, 2909
Sau3AI GATC 9 cut(s) 649, 1092, 1189, 1330, 1611, 1624, 2034, 2618, 2915
Sau96I GGNCC 4 cut(s) 373, 776, 1805, 2553
ScaI AGTACT 2 cut(s) 146, 1144
SchI GAGTC 6 cut(s) 188, 645, 680, 812, 2060, 2662
ScrFI CCNGG 7 cut(s) 220, 1281, 1529, 2226, 2348, 2538, 2658
SduI GDGCHC 5 cut(s) 619, 844, 874, 1363, 1605
SfcI CTRYAG 2 cut(s) 640, 2106
Sfr274I CTCGAG 1 cut(s) 32
SinI GGWCC 4 cut(s) 373, 776, 1805, 2553
SlaI CTCGAG 1 cut(s) 32
SmiMI CAYNNNNRTG 1 cut(s) 2130
SmlI CTYRAG 5 cut(s) 32, 248, 1193, 1604, 2629
SmoI CTYRAG 5 cut(s) 32, 248, 1193, 1604, 2629
SpeI ACTAGT 3 cut(s) 1139, 2375, 2902
Sse9I AATT 8 cut(s) 54, 418, 444, 827, 1978, 2043, 2304, 2435
SseBI AGGCCT 1 cut(s) 1490
SstI GAGCTC 2 cut(s) 874, 1363
StuI AGGCCT 1 cut(s) 1490
StyD4I CCNGG 7 cut(s) 218, 1279, 1527, 2224, 2346, 2536, 2656
StyI CCWWGG 5 cut(s) 1006, 1243, 2480, 2556, 2564
TaaI ACNGT 9 cut(s) 26, 698, 1176, 1306, 1600, 2222, 2264, 2398, 2951
TaiI ACGT 3 cut(s) 337, 2082, 2297
TaqI TCGA 8 cut(s) 33, 1052, 1095, 1188, 1614, 2523, 2679, 2777
TaqII GACCGA 2 cut(s) 1733, 2794
TasI AATT 8 cut(s) 54, 418, 444, 827, 1978, 2043, 2304, 2435
TatI WGTACW 5 cut(s) 144, 789, 1142, 2526, 2782
TauI GCSGC 1 cut(s) 357
TfiI GAWTC 6 cut(s) 40, 453, 569, 1375, 2100, 2676
Tru1I TTAA 9 cut(s) 20, 57, 204, 518, 656, 2372, 2409, 2753, 2909
Tru9I TTAA 9 cut(s) 20, 57, 204, 518, 656, 2372, 2409, 2753, 2909
TseFI GTSAC 4 cut(s) 410, 804, 1135, 2063
Tsp45I GTSAC 4 cut(s) 410, 804, 1135, 2063
TspDTI ATGAA 3 cut(s) 1100, 2181, 2886
TspGWI ACGGA 4 cut(s) 1815, 2127, 2621, 2908
Tth111I GACNNNGTC 1 cut(s) 333
Van91I CCANNNNNTGG 1 cut(s) 731
VpaK11BI GGWCC 4 cut(s) 373, 776, 1805, 2553
XapI RAATTY 2 cut(s) 827, 2435
XceI RCATGY 1 cut(s) 1258
XcmI CCANNNNNNNNNTGG 2 cut(s) 2182, 2279
XhoI CTCGAG 1 cut(s) 32
XmaJI CCTAGG 1 cut(s) 1006
XmiI GTMKAC 2 cut(s) 684, 2109
XmnI GAANNNNTTC 1 cut(s) 568
ZraI GACGTC 1 cut(s) 335
ZrmI AGTACT 2 cut(s) 146, 1144
Zsp2I ATGCAT 1 cut(s) 531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.