pycom05g08620

Belongs to the peptidase C1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0014943
Physical Location & Seq
Forward (+)
11297913 .. 11300333
2421 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g08620.4

Sequence Viewer

Length: 1218 bp
ATGTTTGGGTTTGCTTGTGCAAGGGTGGTGACCACCAGGTCCCCAACCGATCGTGACACAGCAGGACTCTCTAATATTCCTATTTCAACGCAATTCCGGTATTCTTTTCCAAATTCAATTCGCTGTCATTCTCTTCTGCTTCATCCAGCCTATCAAAATCCCCCCTCCCCCCTCCCCTCTTTTGTCCTATATAATACCCACCAACCCCAATTCTACCCATCACATTCGCTCTCAGACCTTTCGTCAACAATGAAACGACAATCCTCTAGATCTTCTGGGGCCATGGCCTCATTGCCCTGCATGGTCCTTCTCCTTCTCCTCCCCCTTGCCGCCGCCATGGACATGTCCATCGTCGACTACAACGAGAAGCATGGCATGCCCGCCTCGTCGGACCCAACCGAGACGGAGGTCAAGGCCCTCTACGAATCCTGGCTCGTCAAGCACGCCAAAAACTACAACGCCTTGGGGGAGAAGGAGCGGAGGTTCGACATTTTTAAGGATAATCTCAGGTTCATTGACGAGCACAATAAGCAGAGCCGGACTTACAAGGTGGGTCTGAACCGGTTCGCCGATCTGACCAACGAGGAGTACCGGTCTGTTTACTTGGGTGCCAAGGTGGACCGGCGCCGGCGGTCCGGGCTTTCTGGGTCGAGGAAGAGCGACCGGTACGCGTTCCGGGCCGGCGATAAGTTGCCGGAGTCGGTCGATTGGAGAGCCGAGGGCGCTGTTCCTGCCGTGAAGGATCAGGGCCAATGCGGGAGTTGCTGGGCGTTCTCAACGGTTGGCGCGGTGGAAGGCATAAACAAGATTGTGACCGGTGAGCTGATCTCTTTATCAGAGCAAGAACTAGTGGATTGTGACAGATCATACAACCAGGGATGCAATGGAGGTCTGATGGACTATGCCTTCCAATTCATCATCACCAATGGCGGTATTGATACTGAAGCAGATTACCCTTACCATGCTCGAGATGGTTCATGTGATCGTAACAGGAAAAATGCTCGGGTTGTTTCCATTGATGGGTATGAAGATGTTCCAGAAAATGATGAGAAGTCGTTGAAGAAGGCTGTGGCACACCAACCAGTTAGTGTTGCCATTGAAGCTGGTGGCAGGGAATTCCAACTCTACCAATCGGGTGTCTTCACTGGACGTTGTGGAACAGATCTAGACCATGGTGTGGTTGCTGTTGGTTATGGCACCGAAAATGGTGTAGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0000932 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0004842 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005764 GO:0005773 GO:0005829 GO:0005911 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009888 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010494 GO:0010498 GO:0010605 GO:0016020 GO:0016049 GO:0016567 GO:0016740 GO:0016787 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030163 GO:0031146 GO:0031224 GO:0031225 GO:0031347 GO:0031348 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0035770 GO:0036211 GO:0036464 GO:0040007 GO:0042176 GO:0042177 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048046 GO:0048364 GO:0048468 GO:0048469 GO:0048519 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051603 GO:0051704 GO:0051707 GO:0055044 GO:0060255 GO:0060560 GO:0065007 GO:0070011 GO:0070647 GO:0071695 GO:0071704 GO:0080090 GO:0080134 GO:0080147 GO:0090558 GO:0090627 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

406

Amino Acids

44.82

Weight (kDa)

6.38

Isoelectric Point (pI)

47.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014943)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36880
fragaria_vesca FvH4_2g05500
malus_domestica MD05G1086900.v1.1 MD12G1087000.v1.1
prunus_persica Prupe.8G131600_v2.0.a1
pyrus_communis pycom05g08620
rosa_chinensis RchiOBHm_Chr6g0255771
rosa_laevigata RLG00000014814
rosa_multiflora Rmu_sc0001163.1_g000010
rosa_roxburghii Rroxscaffold_7G00209680
rosa_rugosa Rorug05G0561400
rosa_samantha Rh6AG079300 Rh6BG072400 Rh6CG070600 Rh6DG067900
rosa_wichuraiana Rw6G006840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 37
AccB1I GGYRCC 3 cut(s) 608, 624, 1196
AccB7I CCANNNNNTGG 1 cut(s) 1177
AccBSI CCGCTC 1 cut(s) 478
AccI GTMKAC 1 cut(s) 354
AccII CGCG 2 cut(s) 671, 788
AciI CCGC 8 cut(s) 330, 333, 381, 478, 631, 756, 788, 930
AclWI GGATC 1 cut(s) 750
AcsI RAATTY 2 cut(s) 112, 1115
AcuI CTGAAG 1 cut(s) 963
AcyI GRCGYC 1 cut(s) 625
AfaI GTAC 2 cut(s) 590, 668
AfiI CCNNNNNNNGG 2 cut(s) 1020, 1177
AflIII ACRYGT 2 cut(s) 342, 669
AgeI ACCGGT 4 cut(s) 561, 591, 663, 815
AgsI TTSAA 4 cut(s) 87, 117, 1060, 1100
AhdI GACNNNNNGTC 1 cut(s) 241
AhlI ACTAGT 1 cut(s) 847
AjnI CCWGG 3 cut(s) 35, 428, 873
AloI GAACNNNNNNTCC 2 cut(s) 467, 499
AluBI AGCT 2 cut(s) 823, 1103
AluI AGCT 2 cut(s) 823, 1103
Alw21I GWGCWC 1 cut(s) 525
Alw26I GTCTC 1 cut(s) 395
AlwI GGATC 1 cut(s) 750
Ama87I CYCGRG 2 cut(s) 966, 1002
AoxI GGCC 5 cut(s) 279, 285, 414, 678, 748
ApoI RAATTY 2 cut(s) 112, 1115
AsiGI ACCGGT 4 cut(s) 561, 591, 663, 815
Asp700I GAANNNNTTC 2 cut(s) 563, 1032
AspLEI GCGC 3 cut(s) 627, 725, 788
AspS9I GGNCC 9 cut(s) 39, 279, 304, 391, 415, 619, 633, 678, 748
AsuC2I CCSGG 2 cut(s) 637, 677
AsuHPI GGTGA 3 cut(s) 40, 830, 913
AvaI CYCGRG 2 cut(s) 966, 1002
AvaII GGWCC 5 cut(s) 39, 304, 391, 619, 633
BanI GGYRCC 3 cut(s) 608, 624, 1196
BbsI GAAGAC 1 cut(s) 1132
Bbv12I GWGCWC 1 cut(s) 525
BccI CCATC 5 cut(s) 226, 356, 889, 965, 1013
BceAI ACGGC 1 cut(s) 719
BciT130I CCWGG 3 cut(s) 37, 430, 875
BcnI CCSGG 2 cut(s) 637, 677
BcoDI GTCTC 1 cut(s) 395
BcuI ACTAGT 1 cut(s) 847
BfaI CTAG 3 cut(s) 267, 848, 1166
BfoI RGCGCY 2 cut(s) 628, 726
BglII AGATCT 2 cut(s) 269, 1162
BisI GCNGC 2 cut(s) 330, 333
BlsI GCNGC 2 cut(s) 331, 334
Bme1390I CCNGG 5 cut(s) 37, 430, 637, 677, 875
Bme18I GGWCC 5 cut(s) 39, 304, 391, 619, 633
BmeRI GACNNNNNGTC 1 cut(s) 241
BmeT110I CYCGRG 2 cut(s) 966, 1002
BmgT120I GGNCC 9 cut(s) 39, 279, 304, 391, 415, 619, 633, 678, 748
BmiI GGNNCC 6 cut(s) 41, 280, 393, 610, 626, 1198
BmrFI CCNGG 5 cut(s) 37, 430, 637, 677, 875
BmsI GCATC 1 cut(s) 869
BoxI GACNNNNGTC 1 cut(s) 407
BpiI GAAGAC 1 cut(s) 1132
BplI GAGNNNNNCTC 2 cut(s) 812, 844
BpuMI CCSGG 2 cut(s) 637, 677
BsaHI GRCGYC 1 cut(s) 625
BsaJI CCNNGG 7 cut(s) 282, 336, 462, 612, 717, 874, 1171
BsaWI WCCGGW 5 cut(s) 96, 561, 591, 663, 815
BsaXI ACNNNNNCTCC 4 cut(s) 467, 497, 578, 608
Bsc4I CCNNNNNNNGG 2 cut(s) 1020, 1177
Bse118I RCCGGY 7 cut(s) 561, 591, 621, 627, 663, 680, 815
Bse1I ACTGG 2 cut(s) 1082, 1150
Bse3DI GCAATG 2 cut(s) 290, 889
BseBI CCWGG 3 cut(s) 37, 430, 875
BseDI CCNNGG 7 cut(s) 282, 336, 462, 612, 717, 874, 1171
BseGI GGATG 2 cut(s) 142, 884
BseLI CCNNNNNNNGG 2 cut(s) 1020, 1177
BseMI GCAATG 2 cut(s) 290, 889
BseMII CTCAG 2 cut(s) 246, 520
BseNI ACTGG 2 cut(s) 1082, 1150
BseRI GAGGAG 2 cut(s) 308, 599
BseYI CCCAGC 1 cut(s) 765
Bsh1236I CGCG 2 cut(s) 671, 788
Bsh1285I CGRYCG 3 cut(s) 52, 664, 705
BshFI GGCC 5 cut(s) 281, 287, 416, 680, 750
BshNI GGYRCC 3 cut(s) 608, 624, 1196
BshTI ACCGGT 4 cut(s) 561, 591, 663, 815
BsiEI CGRYCG 3 cut(s) 52, 664, 705
BsiHKAI GWGCWC 1 cut(s) 525
BsiHKCI CYCGRG 2 cut(s) 966, 1002
BslFI GGGAC 1 cut(s) 25
BslI CCNNNNNNNGG 2 cut(s) 1020, 1177
BsmAI GTCTC 1 cut(s) 395
BsmBI CGTCTC 1 cut(s) 395
BsmFI GGGAC 1 cut(s) 25
BsnI GGCC 5 cut(s) 281, 287, 416, 680, 750
BsoBI CYCGRG 2 cut(s) 966, 1002
Bsp1286I GDGCHC 1 cut(s) 525
Bsp143I GATC 8 cut(s) 49, 269, 571, 742, 825, 863, 982, 1162
Bsp19I CCATGG 3 cut(s) 282, 336, 1171
BspACI CCGC 8 cut(s) 330, 333, 381, 478, 631, 756, 788, 930
BspANI GGCC 5 cut(s) 281, 287, 416, 680, 750
BspCNI CTCAG 2 cut(s) 245, 519
BspFNI CGCG 2 cut(s) 671, 788
BspLI GGNNCC 6 cut(s) 41, 280, 393, 610, 626, 1198
BspPI GGATC 1 cut(s) 750
BspQI GCTCTTC 1 cut(s) 650
BspT107I GGYRCC 3 cut(s) 608, 624, 1196
BsrBI CCGCTC 1 cut(s) 478
BsrDI GCAATG 2 cut(s) 290, 889
BsrFI RCCGGY 7 cut(s) 561, 591, 621, 627, 663, 680, 815
BsrI ACTGG 2 cut(s) 1082, 1150
BssAI RCCGGY 7 cut(s) 561, 591, 621, 627, 663, 680, 815
BssECI CCNNGG 7 cut(s) 282, 336, 462, 612, 717, 874, 1171
BssMI GATC 8 cut(s) 49, 269, 571, 742, 825, 863, 982, 1162
BssNI GRCGYC 1 cut(s) 625
BssT1I CCWWGG 5 cut(s) 282, 336, 462, 612, 1171
Bst2UI CCWGG 3 cut(s) 37, 430, 875
Bst4CI ACNGT 1 cut(s) 781
Bst6I CTCTTC 2 cut(s) 138, 650
BstACI GRCGYC 1 cut(s) 625
BstAPI GCANNNNNTGC 1 cut(s) 376
BstC8I GCNNGC 5 cut(s) 377, 381, 444, 629, 682
BstDEI CTNAG 2 cut(s) 232, 506
BstDSI CCRYGG 3 cut(s) 282, 336, 1171
BstEII GGTNACC 1 cut(s) 28
BstF5I GGATG 2 cut(s) 142, 884
BstFNI CGCG 2 cut(s) 671, 788
BstH2I RGCGCY 2 cut(s) 628, 726
BstHHI GCGC 3 cut(s) 627, 725, 788
BstKTI GATC 8 cut(s) 52, 272, 574, 745, 828, 866, 985, 1165
BstMAI GTCTC 1 cut(s) 395
BstMBI GATC 8 cut(s) 49, 269, 571, 742, 825, 863, 982, 1162
BstMCI CGRYCG 3 cut(s) 52, 664, 705
BstMWI GCNNNNNNNGC 9 cut(s) 376, 439, 529, 637, 677, 722, 731, 762, 1100
BstNI CCWGG 3 cut(s) 37, 430, 875
BstNSI RCATGY 2 cut(s) 346, 379
BstPAI GACNNNNGTC 1 cut(s) 407
BstPI GGTNACC 1 cut(s) 28
BstSCI CCNGG 5 cut(s) 35, 428, 635, 675, 873
BstUI CGCG 2 cut(s) 671, 788
BstV2I GAAGAC 1 cut(s) 1132
BstX2I RGATCY 2 cut(s) 269, 1162
BstYI RGATCY 2 cut(s) 269, 1162
BsuRI GGCC 5 cut(s) 281, 287, 416, 680, 750
BtgI CCRYGG 3 cut(s) 282, 336, 1171
BtsCI GGATG 2 cut(s) 142, 884
BtsIMutI CAGTG 1 cut(s) 1143
Cac8I GCNNGC 5 cut(s) 377, 381, 444, 629, 682
CfoI GCGC 3 cut(s) 627, 725, 788
Cfr10I RCCGGY 7 cut(s) 561, 591, 621, 627, 663, 680, 815
Cfr13I GGNCC 9 cut(s) 39, 279, 304, 391, 415, 619, 633, 678, 748
CpoI CGGWCCG 1 cut(s) 633
CsiI ACCWGGT 1 cut(s) 35
Csp6I GTAC 2 cut(s) 589, 667
CspAI ACCGGT 4 cut(s) 561, 591, 663, 815
CspI CGGWCCG 1 cut(s) 633
CviAII CATG 9 cut(s) 283, 301, 337, 343, 371, 376, 962, 978, 1172
CviQI GTAC 2 cut(s) 589, 667
DdeI CTNAG 2 cut(s) 232, 506
DinI GGCGCC 1 cut(s) 626
DpnI GATC 8 cut(s) 51, 271, 573, 744, 827, 865, 984, 1164
DpnII GATC 8 cut(s) 49, 269, 571, 742, 825, 863, 982, 1162
DrdI GACNNNNNNGTC 1 cut(s) 37
DriI GACNNNNNGTC 1 cut(s) 241
DseDI GACNNNNNNGTC 1 cut(s) 37
Eam1104I CTCTTC 2 cut(s) 138, 650
Eam1105I GACNNNNNGTC 1 cut(s) 241
EarI CTCTTC 2 cut(s) 138, 650
Eco130I CCWWGG 5 cut(s) 282, 336, 462, 612, 1171
Eco47I GGWCC 5 cut(s) 39, 304, 391, 619, 633
Eco57I CTGAAG 1 cut(s) 963
Eco88I CYCGRG 2 cut(s) 966, 1002
Eco91I GGTNACC 1 cut(s) 28
EcoO109I RGGNCCY 2 cut(s) 39, 415
EcoO65I GGTNACC 1 cut(s) 28
EcoRI GAATTC 1 cut(s) 1115
EcoRII CCWGG 3 cut(s) 35, 428, 873
EcoT14I CCWWGG 5 cut(s) 282, 336, 462, 612, 1171
EgeI GGCGCC 1 cut(s) 626
EheI GGCGCC 1 cut(s) 626
ErhI CCWWGG 5 cut(s) 282, 336, 462, 612, 1171
Esp3I CGTCTC 1 cut(s) 395
FaeI CATG 9 cut(s) 286, 304, 340, 346, 374, 379, 965, 981, 1175
FaqI GGGAC 1 cut(s) 25
FatI CATG 9 cut(s) 282, 300, 336, 342, 370, 375, 961, 977, 1171
FauI CCCGC 2 cut(s) 388, 749
FblI GTMKAC 1 cut(s) 354
Fnu4HI GCNGC 2 cut(s) 330, 333
FokI GGATG 2 cut(s) 129, 891
Fsp4HI GCNGC 2 cut(s) 330, 333
FspBI CTAG 3 cut(s) 267, 848, 1166
GlaI GCGC 3 cut(s) 626, 724, 787
GluI GCNGC 2 cut(s) 330, 333
GsaI CCCAGC 1 cut(s) 769
HaeII RGCGCY 2 cut(s) 628, 726
HaeIII GGCC 5 cut(s) 281, 287, 416, 680, 750
HhaI GCGC 3 cut(s) 627, 725, 788
Hin1I GRCGYC 1 cut(s) 625
Hin1II CATG 9 cut(s) 286, 304, 340, 346, 374, 379, 965, 981, 1175
Hin6I GCGC 3 cut(s) 625, 723, 786
HinP1I GCGC 3 cut(s) 625, 723, 786
HincII GTYRAC 2 cut(s) 246, 355
HindII GTYRAC 2 cut(s) 246, 355
HinfI GANTC 3 cut(s) 66, 425, 698
HphI GGTGA 3 cut(s) 40, 830, 913
Hpy166II GTNNAC 4 cut(s) 246, 355, 601, 619
Hpy188I TCNGA 6 cut(s) 235, 391, 558, 576, 838, 894
Hpy188III TCNNGA 5 cut(s) 53, 267, 968, 1037, 1166
Hpy8I GTNNAC 4 cut(s) 246, 355, 601, 619
Hpy99I CGWCG 2 cut(s) 356, 391
HpyAV CCTTC 7 cut(s) 317, 323, 466, 733, 788, 916, 1057
HpyCH4III ACNGT 1 cut(s) 781
HpyCH4IV ACGT 1 cut(s) 1150
HpyCH4V TGCA 3 cut(s) 20, 300, 882
HpyF10VI GCNNNNNNNGC 9 cut(s) 376, 439, 529, 637, 677, 722, 731, 762, 1100
HpyF3I CTNAG 2 cut(s) 232, 506
HpySE526I ACGT 1 cut(s) 1150
Hsp92I GRCGYC 1 cut(s) 625
Hsp92II CATG 9 cut(s) 286, 304, 340, 346, 374, 379, 965, 981, 1175
HspAI GCGC 3 cut(s) 625, 723, 786
KasI GGCGCC 1 cut(s) 624
KroI GCCGGC 2 cut(s) 627, 680
KroNI GCCGGC 2 cut(s) 629, 682
Kzo9I GATC 8 cut(s) 49, 269, 571, 742, 825, 863, 982, 1162
LguI GCTCTTC 1 cut(s) 650
LmnI GCTCC 1 cut(s) 475
LweI GCATC 1 cut(s) 869
MabI ACCWGGT 1 cut(s) 35
MaeI CTAG 3 cut(s) 267, 848, 1166
MaeII ACGT 1 cut(s) 1150
MaeIII GTNAC 5 cut(s) 28, 53, 811, 857, 986
MalI GATC 8 cut(s) 51, 271, 573, 744, 827, 865, 984, 1164
MbiI CCGCTC 1 cut(s) 478
MboI GATC 8 cut(s) 49, 269, 571, 742, 825, 863, 982, 1162
MboII GAAGA 6 cut(s) 125, 264, 667, 1040, 1072, 1132
MflI RGATCY 2 cut(s) 269, 1162
MhlI GDGCHC 1 cut(s) 525
MluCI AATT 6 cut(s) 92, 112, 117, 209, 911, 1115
MluI ACGCGT 1 cut(s) 669
Mly113I GGCGCC 1 cut(s) 625
MlyI GAGTC 2 cut(s) 60, 707
MmeI TCCRAC 2 cut(s) 369, 1144
MreI CGCCGGCG 1 cut(s) 627
MroNI GCCGGC 2 cut(s) 627, 680
MroXI GAANNNNTTC 2 cut(s) 563, 1032
MseI TTAA 1 cut(s) 495
MslI CAYNNNNRTG 1 cut(s) 341
MspR9I CCNGG 5 cut(s) 37, 430, 637, 677, 875
MvaI CCWGG 3 cut(s) 37, 430, 875
MvnI CGCG 2 cut(s) 671, 788
MwoI GCNNNNNNNGC 9 cut(s) 376, 439, 529, 637, 677, 722, 731, 762, 1100
NaeI GCCGGC 2 cut(s) 629, 682
NarI GGCGCC 1 cut(s) 625
NciI CCSGG 2 cut(s) 637, 677
NcoI CCATGG 3 cut(s) 282, 336, 1171
NdeII GATC 8 cut(s) 49, 269, 571, 742, 825, 863, 982, 1162
NgoMIV GCCGGC 2 cut(s) 627, 680
NlaIII CATG 9 cut(s) 286, 304, 340, 346, 374, 379, 965, 981, 1175
NlaIV GGNNCC 6 cut(s) 41, 280, 393, 610, 626, 1198
NmeAIII GCCGAG 1 cut(s) 742
NmuCI GTSAC 4 cut(s) 28, 53, 811, 857
NspI RCATGY 2 cut(s) 346, 379
PaeI GCATGC 1 cut(s) 379
PaeR7I CTCGAG 1 cut(s) 966
PciI ACATGT 1 cut(s) 342
PciSI GCTCTTC 1 cut(s) 650
PcsI WCGNNNNNNNCGW 1 cut(s) 360
PdiI GCCGGC 2 cut(s) 629, 682
PdmI GAANNNNTTC 2 cut(s) 563, 1032
PfeI GAWTC 1 cut(s) 425
PflMI CCANNNNNTGG 1 cut(s) 1177
PinAI ACCGGT 4 cut(s) 561, 591, 663, 815
PkrI GCNGC 2 cut(s) 331, 334
Ple19I CGATCG 1 cut(s) 52
PleI GAGTC 2 cut(s) 60, 706
PluTI GGCGCC 1 cut(s) 628
PpsI GAGTC 2 cut(s) 60, 706
PpuMI RGGWCCY 1 cut(s) 39
PscI ACATGT 1 cut(s) 342
PshAI GACNNNNGTC 1 cut(s) 407
Psp5II RGGWCCY 1 cut(s) 39
Psp6I CCWGG 3 cut(s) 35, 428, 873
PspEI GGTNACC 1 cut(s) 28
PspFI CCCAGC 1 cut(s) 765
PspGI CCWGG 3 cut(s) 35, 428, 873
PspN4I GGNNCC 6 cut(s) 41, 280, 393, 610, 626, 1198
PspPI GGNCC 9 cut(s) 39, 279, 304, 391, 415, 619, 633, 678, 748
PspPPI RGGWCCY 1 cut(s) 39
PsuI RGATCY 2 cut(s) 269, 1162
PvuI CGATCG 1 cut(s) 52
RsaI GTAC 2 cut(s) 590, 668
RsaNI GTAC 2 cut(s) 589, 667
RseI CAYNNNNRTG 1 cut(s) 341
Rsr2I CGGWCCG 1 cut(s) 633
RsrII CGGWCCG 1 cut(s) 633
SalI GTCGAC 1 cut(s) 353
SapI GCTCTTC 1 cut(s) 650
SaqAI TTAA 1 cut(s) 495
SatI GCNGC 2 cut(s) 330, 333
Sau3AI GATC 8 cut(s) 49, 269, 571, 742, 825, 863, 982, 1162
Sau96I GGNCC 9 cut(s) 39, 279, 304, 391, 415, 619, 633, 678, 748
SchI GAGTC 2 cut(s) 60, 707
ScrFI CCNGG 5 cut(s) 37, 430, 637, 677, 875
SduI GDGCHC 1 cut(s) 525
SexAI ACCWGGT 1 cut(s) 35
SfaNI GCATC 1 cut(s) 869
SfoI GGCGCC 1 cut(s) 626
Sfr274I CTCGAG 1 cut(s) 966
SgrAI CRCCGGYG 1 cut(s) 627
SinI GGWCC 5 cut(s) 39, 304, 391, 619, 633
SlaI CTCGAG 1 cut(s) 966
SmiMI CAYNNNNRTG 1 cut(s) 341
SmlI CTYRAG 1 cut(s) 966
SmoI CTYRAG 1 cut(s) 966
SpeI ACTAGT 1 cut(s) 847
SphI GCATGC 1 cut(s) 379
Sse9I AATT 6 cut(s) 92, 112, 117, 209, 911, 1115
SsiI CCGC 8 cut(s) 330, 333, 381, 478, 631, 756, 788, 930
SspDI GGCGCC 1 cut(s) 624
SspI AATATT 1 cut(s) 76
SspMI CTAG 3 cut(s) 267, 848, 1166
StyD4I CCNGG 5 cut(s) 35, 428, 635, 675, 873
StyI CCWWGG 5 cut(s) 282, 336, 462, 612, 1171
TaaI ACNGT 1 cut(s) 781
TaiI ACGT 1 cut(s) 1153
TaqI TCGA 5 cut(s) 354, 486, 650, 705, 967
TaqII GACCGA 1 cut(s) 691
TasI AATT 6 cut(s) 92, 112, 117, 209, 911, 1115
TauI GCSGC 2 cut(s) 332, 335
TfiI GAWTC 1 cut(s) 425
Tru1I TTAA 1 cut(s) 495
Tru9I TTAA 1 cut(s) 495
TscAI CASTG 1 cut(s) 1150
TseFI GTSAC 4 cut(s) 28, 53, 811, 857
Tsp45I GTSAC 4 cut(s) 28, 53, 811, 857
TspDTI ATGAA 6 cut(s) 131, 266, 502, 904, 966, 1041
TspGWI ACGGA 1 cut(s) 419
TspRI CASTG 1 cut(s) 1150
Van91I CCANNNNNTGG 1 cut(s) 1177
VpaK11BI GGWCC 5 cut(s) 39, 304, 391, 619, 633
XapI RAATTY 2 cut(s) 112, 1115
XbaI TCTAGA 2 cut(s) 266, 1165
XceI RCATGY 2 cut(s) 346, 379
XcmI CCANNNNNNNNNTGG 2 cut(s) 881, 968
XhoI CTCGAG 1 cut(s) 966
XmiI GTMKAC 1 cut(s) 354
XmnI GAANNNNTTC 2 cut(s) 563, 1032
XspI CTAG 3 cut(s) 267, 848, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.