RLG00000014814

Belongs to the peptidase C1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0014943
Physical Location & Seq
Forward (+)
57912983 .. 57917909
4927 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014814

Sequence Viewer

Length: 1680 bp
ATGGCCGTCGCCGTTTTCTTCTTCCTCTTCCTCGGCCTAGCTTCTGCCGCCGACATGTCGATCATCGACTACGACAAGAAACACGGCATGGGTGTCGTACCAGAAAGGACCAAGGCCGAGGTGAAGGCCATGTACGAGTCGTGGCTGGTCAAACACCGCAAGGCGTACAATGCGCTGGGCGAGAAGGAGAGAAGGTTCCAGATTTTTAAGGATAATCTGAGGTTCATCGACGAGCATAACAAGGTGAACCGGAGTTATAAGGTGGGGTTGAACCGGTTCGCGGATATGACGAACCTGGAGTACCGGTCGAGGTTCTTGGGGATGAACAAGGACCGGGCTGCCAGGCTTTCAGGTGGGAAGACGGGTCGGTATGCGTATCGGGTCGGGGACAAGTTGCCCGACTCCGTGGATTGGAGGGCCAAGGGCGCTGTTTCCGAGGTTAAGGATCAAGGCCAATGCGGGAGTTGCTGGGCTTTCTCAACGGTTGGGGCAGTGGAAGGTGTAAACCAGATTGTGACGGGTGAGCTAATCTCATTGTCTGAGCAAGAACTTGTGGATTGTGATAAATCCTACAACCAGGGATGCAATGGAGGTCTTATGGACTATGCCTTCCAATTCATCATGAACAATGGTGGCATTGATTCCGAGGCTGATTACCCTTACCGGGGTACCGAGGGTTCATGTGATCCCAACAGGAAAAATGCTCGTGTTGTTTCCATTGATGGATATGAAGATGTTCCACAAAATGATGAGATCTCTTTGAAGAAGGCTTTGGCACATCAACCCGTGAGTGTTGCCATTGAAGCTGGGGGCCGGGAATTCCAGCTCTACCAATCGGGTGTATTCACTGGACGCTGTGGAACCGATCTAGACCATGGTGTGCTTACTGTTGGGTATGGTACCGACAATGGCAAGGACTATTGGATCGTGAAGAACTCATGGGGTCCTAACTGGGGAGAAGCTGGTTACATCAGGTTGGAGCGCAATGTAGCCGCCAAGACTGGCAAATGTGGCATTGCCATTGAGCCGTCATACCCAACAAAGAAGGGTCAGAACCCTCCTAGACCTGGGCCATCCCCTCCATCTCCTCCTCCCCCGGTGAATCCATCAACTGTTTGCGATGATTACTACTCGTGCCCTGCTGGAACCACATGCTGCTGCGCCTATGCTTATGGAAACTTCTGCTTTGGGTGGGGATGCTGCCCTATGGAGTCTGCAACCTGCTGCGATGACCACTACAGCTGCTGCCCTAGTGACTACCCCGTCTGTGACCTTGATGCAGGAACTTGCAGACTGAGCAAGAACAGTCCCGTGAGTGTGAAGTCCTTGAAGAGAACTTCAGCTATAAACAGACGGCGTCAAATCGTCGCCGTTAACCGCGTTGACCACTTGAGCACAAAAGACCTCGGTAACCCGCCCGATTCCGAAGCTCCAATCTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTGTGAAAACCCTAGGACACTGAACTCTCTCGTATGGAATCTCACCGCTTCTAAATTCTCGCGCTCTTCGTCCCGAATCTCTGGCGTTTTAGGATGGATTCGGAATCTTCGGTTCCATCAACTTCACCTTCAGTTAAAGCTCCTGAGGAGCAACCTCCTGCTGCTTCAGACTCAGGATCAGATAATAGTTCTCGGGAGGCGCCATCCAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0000932 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0004842 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005764 GO:0005773 GO:0005829 GO:0005911 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009888 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010494 GO:0010498 GO:0010605 GO:0016020 GO:0016049 GO:0016567 GO:0016740 GO:0016787 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030163 GO:0031146 GO:0031224 GO:0031225 GO:0031347 GO:0031348 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0035770 GO:0036211 GO:0036464 GO:0040007 GO:0042176 GO:0042177 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048046 GO:0048364 GO:0048468 GO:0048469 GO:0048519 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051603 GO:0051704 GO:0051707 GO:0055044 GO:0060255 GO:0060560 GO:0065007 GO:0070011 GO:0070647 GO:0071695 GO:0071704 GO:0080090 GO:0080134 GO:0080147 GO:0090558 GO:0090627 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

560

Amino Acids

61.78

Weight (kDa)

8.51

Isoelectric Point (pI)

39.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 45 - 101 1.5e-18 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 132 - 347 9e-88 Papain family cysteine protease
Granulin PF00396 384 - 430 7.9e-09 Granulin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014943)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36880
fragaria_vesca FvH4_2g05500
malus_domestica MD05G1086900.v1.1 MD12G1087000.v1.1
prunus_persica Prupe.8G131600_v2.0.a1
pyrus_communis pycom05g08620
rosa_chinensis RchiOBHm_Chr6g0255771
rosa_laevigata RLG00000014814
rosa_multiflora Rmu_sc0001163.1_g000010
rosa_roxburghii Rroxscaffold_7G00209680
rosa_rugosa Rorug05G0561400
rosa_samantha Rh6AG079300 Rh6BG072400 Rh6CG070600 Rh6DG067900
rosa_wichuraiana Rw6G006840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 258
AasI GACNNNNNNGTC 1 cut(s) 1262
Acc36I ACCTGC 1 cut(s) 1229
Acc65I GGTACC 2 cut(s) 668, 899
AccB1I GGYRCC 3 cut(s) 668, 899, 1665
AccII CGCG 3 cut(s) 281, 1380, 1528
AciI CCGC 8 cut(s) 48, 157, 281, 459, 993, 1378, 1415, 1512
AclWI GGATC 4 cut(s) 453, 680, 932, 1650
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 818, 1520
AcuI CTGAAG 3 cut(s) 1323, 1580, 1616
AcyI GRCGYC 2 cut(s) 1357, 1666
AfaI GTAC 6 cut(s) 99, 134, 167, 302, 670, 901
AfiI CCNNNNNNNGG 6 cut(s) 280, 411, 664, 665, 953, 1067
AflIII ACRYGT 1 cut(s) 54
AgeI ACCGGT 2 cut(s) 273, 303
AgsI TTSAA 4 cut(s) 271, 763, 803, 1330
AjnI CCWGG 4 cut(s) 294, 341, 576, 1066
AjuI GAANNNNNNNTTGG 2 cut(s) 755, 787
AloI GAACNNNNNNTCC 2 cut(s) 179, 211
Alw21I GWGCWC 1 cut(s) 1397
AlwI GGATC 4 cut(s) 453, 680, 932, 1650
AlwNI CAGNNNCTG 1 cut(s) 1245
Ama87I CYCGRG 1 cut(s) 1658
AoxI GGCC 8 cut(s) 3, 34, 114, 126, 417, 451, 811, 1070
ApeKI GCWGC 8 cut(s) 338, 1155, 1158, 1200, 1224, 1242, 1245, 1627
ApoI RAATTY 2 cut(s) 818, 1520
AsiGI ACCGGT 2 cut(s) 273, 303
Asp700I GAANNNNTTC 2 cut(s) 275, 735
Asp718I GGTACC 2 cut(s) 668, 899
AspA2I CCTAGG 1 cut(s) 1478
AspLEI GCGC 6 cut(s) 175, 428, 984, 1163, 1530, 1668
AspS9I GGNCC 6 cut(s) 108, 331, 417, 811, 944, 1070
AsuC2I CCSGG 4 cut(s) 335, 665, 815, 1097
AsuHPI GGTGA 6 cut(s) 133, 256, 533, 1111, 1501, 1583
AvaI CYCGRG 1 cut(s) 1658
AvaII GGWCC 3 cut(s) 108, 331, 944
AvrII CCTAGG 1 cut(s) 1478
AxyI CCTNAGG 1 cut(s) 1610
BaeGI GKGCMC 1 cut(s) 1139
BaeI ACNNNNGTAYC 2 cut(s) 652, 685
BanI GGYRCC 3 cut(s) 668, 899, 1665
BarI GAAGNNNNNNTAC 2 cut(s) 116, 148
BauI CACGAG 2 cut(s) 705, 1132
BbsI GAAGAC 1 cut(s) 365
Bbv12I GWGCWC 1 cut(s) 1397
BbvI GCAGC 8 cut(s) 325, 1142, 1145, 1187, 1211, 1229, 1232, 1614
BccI CCATC 7 cut(s) 716, 1081, 1090, 1114, 1554, 1590, 1677
BceAI ACGGC 4 cut(s) 100, 1012, 1355, 1370
BcgI CGANNNNNNTGC 2 cut(s) 76, 110
BciT130I CCWGG 4 cut(s) 296, 343, 578, 1068
BcnI CCSGG 4 cut(s) 335, 665, 815, 1097
BfaI CTAG 5 cut(s) 38, 869, 1062, 1251, 1479
BfmI CTRYAG 1 cut(s) 1237
BfoI RGCGCY 2 cut(s) 429, 1669
BfuAI ACCTGC 1 cut(s) 1229
BglII AGATCT 1 cut(s) 753
BlnI CCTAGG 1 cut(s) 1478
Bme1390I CCNGG 8 cut(s) 296, 335, 343, 578, 665, 815, 1068, 1097
Bme18I GGWCC 3 cut(s) 108, 331, 944
BmeT110I CYCGRG 1 cut(s) 1658
BmgT120I GGNCC 6 cut(s) 108, 331, 417, 811, 944, 1070
BmiI GGNNCC 9 cut(s) 197, 670, 812, 862, 901, 945, 1147, 1580, 1667
BmrFI CCNGG 8 cut(s) 296, 335, 343, 578, 665, 815, 1068, 1097
BmrI ACTGGG 1 cut(s) 961
BmsI GCATC 3 cut(s) 572, 1187, 1267
BmuI ACTGGG 1 cut(s) 961
BpiI GAAGAC 1 cut(s) 365
BplI GAGNNNNNCTC 2 cut(s) 515, 547
BpmI CTGGAG 1 cut(s) 317
BpuEI CTTGAG 1 cut(s) 1411
BpuMI CCSGG 4 cut(s) 335, 665, 815, 1097
BsaHI GRCGYC 2 cut(s) 1357, 1666
BsaWI WCCGGW 3 cut(s) 249, 273, 303
BsaXI ACNNNNNCTCC 4 cut(s) 179, 209, 290, 320
Bsc4I CCNNNNNNNGG 6 cut(s) 280, 411, 664, 665, 953, 1067
Bse118I RCCGGY 2 cut(s) 273, 303
Bse1I ACTGG 3 cut(s) 853, 956, 1006
Bse21I CCTNAGG 1 cut(s) 1610
Bse3DI GCAATG 3 cut(s) 592, 991, 1014
BseBI CCWGG 4 cut(s) 296, 343, 578, 1068
BseGI GGATG 6 cut(s) 327, 587, 1073, 1202, 1565, 1669
BseLI CCNNNNNNNGG 6 cut(s) 280, 411, 664, 665, 953, 1067
BseMI GCAATG 3 cut(s) 592, 991, 1014
BseMII CTCAG 5 cut(s) 209, 531, 1286, 1601, 1652
BseNI ACTGG 3 cut(s) 853, 956, 1006
BseRI GAGGAG 3 cut(s) 1077, 1080, 1627
BseSI GKGCMC 1 cut(s) 1139
BseXI GCAGC 8 cut(s) 325, 1142, 1145, 1187, 1211, 1229, 1232, 1614
BseYI CCCAGC 3 cut(s) 175, 468, 806
Bsh1236I CGCG 3 cut(s) 281, 1380, 1528
Bsh1285I CGRYCG 1 cut(s) 308
BshFI GGCC 8 cut(s) 5, 36, 116, 128, 419, 453, 813, 1072
BshNI GGYRCC 3 cut(s) 668, 899, 1665
BshTI ACCGGT 2 cut(s) 273, 303
BsiEI CGRYCG 1 cut(s) 308
BsiHKAI GWGCWC 1 cut(s) 1397
BsiHKCI CYCGRG 1 cut(s) 1658
BsiSI CCGG 7 cut(s) 250, 274, 304, 334, 664, 814, 1097
BslFI GGGAC 3 cut(s) 401, 1293, 1522
BslI CCNNNNNNNGG 6 cut(s) 280, 411, 664, 665, 953, 1067
BsmFI GGGAC 3 cut(s) 401, 1293, 1522
BsnI GGCC 8 cut(s) 5, 36, 116, 128, 419, 453, 813, 1072
BsoBI CYCGRG 1 cut(s) 1658
Bsp1286I GDGCHC 2 cut(s) 1139, 1397
Bsp143I GATC 7 cut(s) 60, 445, 685, 753, 865, 924, 1642
Bsp19I CCATGG 1 cut(s) 874
BspACI CCGC 8 cut(s) 48, 157, 281, 459, 993, 1378, 1415, 1512
BspANI GGCC 8 cut(s) 5, 36, 116, 128, 419, 453, 813, 1072
BspCNI CTCAG 5 cut(s) 210, 532, 1287, 1602, 1651
BspFNI CGCG 3 cut(s) 281, 1380, 1528
BspHI TCATGA 1 cut(s) 621
BspLI GGNNCC 9 cut(s) 197, 670, 812, 862, 901, 945, 1147, 1580, 1667
BspMI ACCTGC 1 cut(s) 1229
BspPI GGATC 4 cut(s) 453, 680, 932, 1650
BspQI GCTCTTC 1 cut(s) 1537
BspT107I GGYRCC 3 cut(s) 668, 899, 1665
BsrDI GCAATG 3 cut(s) 592, 991, 1014
BsrFI RCCGGY 2 cut(s) 273, 303
BsrI ACTGG 3 cut(s) 853, 956, 1006
BssAI RCCGGY 2 cut(s) 273, 303
BssMI GATC 7 cut(s) 60, 445, 685, 753, 865, 924, 1642
BssNI GRCGYC 2 cut(s) 1357, 1666
BssSI CACGAG 2 cut(s) 705, 1132
BssT1I CCWWGG 4 cut(s) 111, 420, 874, 1478
Bst2BI CACGAG 2 cut(s) 705, 1132
Bst2UI CCWGG 4 cut(s) 296, 343, 578, 1068
Bst4CI ACNGT 4 cut(s) 484, 889, 1114, 1307
Bst6I CTCTTC 3 cut(s) 32, 1325, 1537
BstACI GRCGYC 2 cut(s) 1357, 1666
BstDEI CTNAG 5 cut(s) 218, 540, 1295, 1610, 1638
BstDSI CCRYGG 2 cut(s) 405, 874
BstEII GGTNACC 1 cut(s) 1409
BstF5I GGATG 6 cut(s) 327, 587, 1073, 1202, 1565, 1669
BstFNI CGCG 3 cut(s) 281, 1380, 1528
BstH2I RGCGCY 2 cut(s) 429, 1669
BstHHI GCGC 6 cut(s) 175, 428, 984, 1163, 1530, 1668
BstKTI GATC 7 cut(s) 63, 448, 688, 756, 868, 927, 1645
BstMBI GATC 7 cut(s) 60, 445, 685, 753, 865, 924, 1642
BstMCI CGRYCG 1 cut(s) 308
BstMWI GCNNNNNNNGC 8 cut(s) 47, 170, 425, 465, 803, 1011, 1296, 1674
BstNI CCWGG 4 cut(s) 296, 343, 578, 1068
BstNSI RCATGY 2 cut(s) 58, 1155
BstPI GGTNACC 1 cut(s) 1409
BstSCI CCNGG 8 cut(s) 294, 333, 341, 576, 663, 813, 1066, 1095
BstSFI CTRYAG 1 cut(s) 1237
BstSLI GKGCMC 1 cut(s) 1139
BstUI CGCG 3 cut(s) 281, 1380, 1528
BstV1I GCAGC 8 cut(s) 325, 1142, 1145, 1187, 1211, 1229, 1232, 1614
BstV2I GAAGAC 1 cut(s) 365
BstX2I RGATCY 1 cut(s) 753
BstYI RGATCY 1 cut(s) 753
Bsu36I CCTNAGG 1 cut(s) 1610
BsuRI GGCC 8 cut(s) 5, 36, 116, 128, 419, 453, 813, 1072
BtgI CCRYGG 2 cut(s) 405, 874
BtgZI GCGATG 2 cut(s) 1134, 1242
BtsCI GGATG 6 cut(s) 327, 587, 1073, 1202, 1565, 1669
BtsI GCAGTG 1 cut(s) 498
BtsIMutI CAGTG 3 cut(s) 498, 846, 1484
BveI ACCTGC 1 cut(s) 1229
CaiI CAGNNNCTG 1 cut(s) 1245
CciI TCATGA 1 cut(s) 621
CfoI GCGC 6 cut(s) 175, 428, 984, 1163, 1530, 1668
Cfr10I RCCGGY 2 cut(s) 273, 303
Cfr13I GGNCC 6 cut(s) 108, 331, 417, 811, 944, 1070
CseI GACGC 2 cut(s) 861, 1346
Csp6I GTAC 6 cut(s) 98, 133, 166, 301, 669, 900
CspAI ACCGGT 2 cut(s) 273, 303
CviAII CATG 8 cut(s) 55, 88, 130, 622, 681, 875, 939, 1152
CviQI GTAC 6 cut(s) 98, 133, 166, 301, 669, 900
DdeI CTNAG 5 cut(s) 218, 540, 1295, 1610, 1638
DinI GGCGCC 1 cut(s) 1667
DpnI GATC 7 cut(s) 62, 447, 687, 755, 867, 926, 1644
DpnII GATC 7 cut(s) 60, 445, 685, 753, 865, 924, 1642
DrdI GACNNNNNNGTC 1 cut(s) 1262
DseDI GACNNNNNNGTC 1 cut(s) 1262
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 32, 1325, 1537
EarI CTCTTC 3 cut(s) 32, 1325, 1537
Eco130I CCWWGG 4 cut(s) 111, 420, 874, 1478
Eco47I GGWCC 3 cut(s) 108, 331, 944
Eco57I CTGAAG 3 cut(s) 1323, 1580, 1616
Eco81I CCTNAGG 1 cut(s) 1610
Eco88I CYCGRG 1 cut(s) 1658
Eco91I GGTNACC 1 cut(s) 1409
EcoO109I RGGNCCY 1 cut(s) 944
EcoO65I GGTNACC 1 cut(s) 1409
EcoRI GAATTC 1 cut(s) 818
EcoRII CCWGG 4 cut(s) 294, 341, 576, 1066
EcoT14I CCWWGG 4 cut(s) 111, 420, 874, 1478
EgeI GGCGCC 1 cut(s) 1667
EheI GGCGCC 1 cut(s) 1667
ErhI CCWWGG 4 cut(s) 111, 420, 874, 1478
FaeI CATG 8 cut(s) 58, 91, 133, 625, 684, 878, 942, 1155
FaqI GGGAC 3 cut(s) 401, 1293, 1522
FatI CATG 8 cut(s) 54, 87, 129, 621, 680, 874, 938, 1151
FauI CCCGC 2 cut(s) 452, 1422
FokI GGATG 6 cut(s) 334, 594, 1060, 1209, 1572, 1656
FspBI CTAG 5 cut(s) 38, 869, 1062, 1251, 1479
GlaI GCGC 6 cut(s) 174, 427, 983, 1162, 1529, 1667
GsaI CCCAGC 3 cut(s) 179, 472, 810
GsuI CTGGAG 1 cut(s) 317
HaeII RGCGCY 2 cut(s) 429, 1669
HaeIII GGCC 8 cut(s) 5, 36, 116, 128, 419, 453, 813, 1072
HapII CCGG 7 cut(s) 250, 274, 304, 334, 664, 814, 1097
HgaI GACGC 2 cut(s) 861, 1346
HhaI GCGC 6 cut(s) 175, 428, 984, 1163, 1530, 1668
Hin1I GRCGYC 2 cut(s) 1357, 1666
Hin1II CATG 8 cut(s) 58, 91, 133, 625, 684, 878, 942, 1155
Hin6I GCGC 6 cut(s) 173, 426, 982, 1161, 1528, 1666
HinP1I GCGC 6 cut(s) 173, 426, 982, 1161, 1528, 1666
HincII GTYRAC 2 cut(s) 1375, 1384
HindII GTYRAC 2 cut(s) 1375, 1384
HpaI GTTAAC 1 cut(s) 1375
HpaII CCGG 7 cut(s) 250, 274, 304, 334, 664, 814, 1097
HphI GGTGA 6 cut(s) 133, 256, 533, 1111, 1501, 1583
Hpy166II GTNNAC 4 cut(s) 247, 505, 1375, 1384
Hpy188I TCNGA 9 cut(s) 219, 436, 541, 646, 1053, 1426, 1569, 1635, 1647
Hpy188III TCNNGA 8 cut(s) 199, 622, 869, 928, 1539, 1609, 1640, 1660
Hpy8I GTNNAC 4 cut(s) 247, 505, 1375, 1384
Hpy99I CGWCG 3 cut(s) 11, 233, 1370
HpyAV CCTTC 8 cut(s) 118, 178, 186, 491, 619, 760, 1039, 1604
HpyCH4III ACNGT 4 cut(s) 484, 889, 1114, 1307
HpyCH4V TGCA 4 cut(s) 585, 1217, 1280, 1290
HpyF10VI GCNNNNNNNGC 8 cut(s) 47, 170, 425, 465, 803, 1011, 1296, 1674
HpyF3I CTNAG 5 cut(s) 218, 540, 1295, 1610, 1638
Hsp92I GRCGYC 2 cut(s) 1357, 1666
Hsp92II CATG 8 cut(s) 58, 91, 133, 625, 684, 878, 942, 1155
HspAI GCGC 6 cut(s) 173, 426, 982, 1161, 1528, 1666
KasI GGCGCC 1 cut(s) 1665
KpnI GGTACC 2 cut(s) 672, 903
KspAI GTTAAC 1 cut(s) 1375
Kzo9I GATC 7 cut(s) 60, 445, 685, 753, 865, 924, 1642
LguI GCTCTTC 1 cut(s) 1537
LmnI GCTCC 4 cut(s) 979, 1435, 1611, 1614
Lsp1109I GCAGC 8 cut(s) 325, 1142, 1145, 1187, 1211, 1229, 1232, 1614
LweI GCATC 3 cut(s) 572, 1187, 1267
MaeI CTAG 5 cut(s) 38, 869, 1062, 1251, 1479
MaeIII GTNAC 5 cut(s) 514, 965, 1253, 1268, 1409
MalI GATC 7 cut(s) 62, 447, 687, 755, 867, 926, 1644
MboI GATC 7 cut(s) 60, 445, 685, 753, 865, 924, 1642
MflI RGATCY 1 cut(s) 753
MhlI GDGCHC 2 cut(s) 1139, 1397
MluCI AATT 3 cut(s) 614, 818, 1520
Mly113I GGCGCC 1 cut(s) 1666
MlyI GAGTC 4 cut(s) 146, 395, 1220, 1630
MmeI TCCRAC 1 cut(s) 957
MroXI GAANNNNTTC 2 cut(s) 275, 735
MseI TTAA 4 cut(s) 207, 441, 1374, 1601
MspA1I CMGCKG 1 cut(s) 1242
MspI CCGG 7 cut(s) 250, 274, 304, 334, 664, 814, 1097
MspR9I CCNGG 8 cut(s) 296, 335, 343, 578, 665, 815, 1068, 1097
MvaI CCWGG 4 cut(s) 296, 343, 578, 1068
MvnI CGCG 3 cut(s) 281, 1380, 1528
MwoI GCNNNNNNNGC 8 cut(s) 47, 170, 425, 465, 803, 1011, 1296, 1674
NarI GGCGCC 1 cut(s) 1666
NciI CCSGG 4 cut(s) 335, 665, 815, 1097
NcoI CCATGG 1 cut(s) 874
NdeII GATC 7 cut(s) 60, 445, 685, 753, 865, 924, 1642
NlaIII CATG 8 cut(s) 58, 91, 133, 625, 684, 878, 942, 1155
NlaIV GGNNCC 9 cut(s) 197, 670, 812, 862, 901, 945, 1147, 1580, 1667
NmeAIII GCCGAG 2 cut(s) 12, 142
NmuCI GTSAC 3 cut(s) 514, 1253, 1268
NspI RCATGY 2 cut(s) 58, 1155
PagI TCATGA 1 cut(s) 621
PciI ACATGT 1 cut(s) 54
PciSI GCTCTTC 1 cut(s) 1537
PcsI WCGNNNNNNNCGW 1 cut(s) 1532
PdmI GAANNNNTTC 2 cut(s) 275, 735
PfeI GAWTC 7 cut(s) 641, 1102, 1421, 1504, 1542, 1564, 1570
PflFI GACNNNGTC 1 cut(s) 1356
PinAI ACCGGT 2 cut(s) 273, 303
PleI GAGTC 4 cut(s) 145, 395, 1219, 1630
PluTI GGCGCC 1 cut(s) 1669
PpsI GAGTC 4 cut(s) 145, 395, 1219, 1630
PpuMI RGGWCCY 1 cut(s) 944
PscI ACATGT 1 cut(s) 54
PsiI TTATAA 1 cut(s) 258
Psp5II RGGWCCY 1 cut(s) 944
Psp6I CCWGG 4 cut(s) 294, 341, 576, 1066
PspEI GGTNACC 1 cut(s) 1409
PspFI CCCAGC 3 cut(s) 175, 468, 806
PspGI CCWGG 4 cut(s) 294, 341, 576, 1066
PspN4I GGNNCC 9 cut(s) 197, 670, 812, 862, 901, 945, 1147, 1580, 1667
PspPI GGNCC 6 cut(s) 108, 331, 417, 811, 944, 1070
PspPPI RGGWCCY 1 cut(s) 944
PsrI GAACNNNNNNTAC 4 cut(s) 284, 316, 661, 693
PstNI CAGNNNCTG 1 cut(s) 1245
PsuI RGATCY 1 cut(s) 753
PsyI GACNNNGTC 1 cut(s) 1356
PvuII CAGCTG 1 cut(s) 1242
RsaI GTAC 6 cut(s) 99, 134, 167, 302, 670, 901
RsaNI GTAC 6 cut(s) 98, 133, 166, 301, 669, 900
SapI GCTCTTC 1 cut(s) 1537
SaqAI TTAA 4 cut(s) 207, 441, 1374, 1601
Sau3AI GATC 7 cut(s) 60, 445, 685, 753, 865, 924, 1642
Sau96I GGNCC 6 cut(s) 108, 331, 417, 811, 944, 1070
SchI GAGTC 4 cut(s) 146, 395, 1220, 1630
ScrFI CCNGG 8 cut(s) 296, 335, 343, 578, 665, 815, 1068, 1097
SduI GDGCHC 2 cut(s) 1139, 1397
SfaNI GCATC 3 cut(s) 572, 1187, 1267
SfcI CTRYAG 1 cut(s) 1237
SfoI GGCGCC 1 cut(s) 1667
SinI GGWCC 3 cut(s) 108, 331, 944
SmlI CTYRAG 1 cut(s) 1390
SmoI CTYRAG 1 cut(s) 1390
Sse9I AATT 3 cut(s) 614, 818, 1520
SsiI CCGC 8 cut(s) 48, 157, 281, 459, 993, 1378, 1415, 1512
SspDI GGCGCC 1 cut(s) 1665
SspMI CTAG 5 cut(s) 38, 869, 1062, 1251, 1479
StyD4I CCNGG 8 cut(s) 294, 333, 341, 576, 663, 813, 1066, 1095
StyI CCWWGG 4 cut(s) 111, 420, 874, 1478
TaaI ACNGT 4 cut(s) 484, 889, 1114, 1307
TaqI TCGA 4 cut(s) 59, 66, 228, 308
TasI AATT 3 cut(s) 614, 818, 1520
TauI GCSGC 2 cut(s) 50, 995
TfiI GAWTC 7 cut(s) 641, 1102, 1421, 1504, 1542, 1564, 1570
Tru1I TTAA 4 cut(s) 207, 441, 1374, 1601
Tru9I TTAA 4 cut(s) 207, 441, 1374, 1601
TscAI CASTG 3 cut(s) 498, 853, 1491
TseFI GTSAC 3 cut(s) 514, 1253, 1268
TseI GCWGC 8 cut(s) 338, 1155, 1158, 1200, 1224, 1242, 1245, 1627
Tsp45I GTSAC 3 cut(s) 514, 1253, 1268
TspDTI ATGAA 6 cut(s) 214, 338, 607, 638, 669, 744
TspGWI ACGGA 1 cut(s) 394
TspRI CASTG 3 cut(s) 498, 853, 1491
Tth111I GACNNNGTC 1 cut(s) 1356
VpaK11BI GGWCC 3 cut(s) 108, 331, 944
XapI RAATTY 2 cut(s) 818, 1520
XbaI TCTAGA 1 cut(s) 868
XceI RCATGY 2 cut(s) 58, 1155
XcmI CCANNNNNNNNNTGG 1 cut(s) 584
XmaJI CCTAGG 1 cut(s) 1478
XmnI GAANNNNTTC 2 cut(s) 275, 735
XspI CTAG 5 cut(s) 38, 869, 1062, 1251, 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.