Rroxscaffold_7G00209680

Belongs to the peptidase C1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0014943
Physical Location & Seq
Forward (+)
59929826 .. 59932267
2442 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00209680.1

Sequence Viewer

Length: 1335 bp
ATGTCGATCATCGACTACGACAAGAATCACGGCATGGGTGTCGTACCAGAAAGGACCGAGGCCGAGGTGAAGGCCATGTACGAGTCGTGGCTGGTCAAACACCGCAAGGCGTACAATGCGCTGGGCGAGAAGGAGAGAAGGTTCCAGATTTTTAAGGATAATCTGAGGTTCATCGACGAGCATAACAAGGTGAACCGGAGTTACAAGGTGGGGTTGAACCGGTTCGCGGATATGACTAACCTGGAGTACCGGTCGAGGTTCTTGGGAATGAAGAAGGACCGGGCGGCCAGGCTTTCAGGTGGGAAGACGGGTCGGTATGCGTATCGGGTCGGGGACAAGTTGCCCGACTCCGTGGATTGGAGGGCCAAGGGCGCTGTTTCCGAGGTTAAGGATCAAGGCCAATGCGGGAGTTGCTGGGCTTTCTCAACGGTTGGTGCAGTGGAAGGTGTAAACCAGATTGTGACCGGTGAGCTAATCTCATTGTCTGAGCAAGAACTTGTGGATTGTGATAAATCCTACAACCAGGGATGCAATGGAGGTCTTATGGACTATGCCTTCCAATTCATCATGAACAATGGTGGCATTGATTCCGAGGCTGATTACCCTTACCGGGGTACCGAGGGTTCATGTGATCCCAACAGGAAAAATGCTCGTGTTGTTTCCATTGATGGATATGAAGATGTTCCACAAAATGATGAGATCTCTTTGAAGAAGGCTTTGGCACATCAACCCGTGAGTGTTGCCATTGAAGCTGGGGGCCGGGAATTCCAGCTCTACCAATCGGGTGTATTCACTGGACGCTGTGGAACCGATCTAGACCATGGTGTGCTTACTGTTGGGTATGGTACCGACAATGGCAAGGACTATTGGATCGTGAAGAACTCATGGGGTCCTAACTGGGGAGAAGCTGGTTACATCAGGTTGGAGCGCAATGTAGCCGCCAAGACTGGCAAATGTGGCATTGCCATTGAGCCGTCATACCCAACAAAGAAGGGTCAGAACCCTCCTAGACCTGGGCCATCCCCTCCATCTCCTCCTCCCCCGGTGAATCCATCAACTGTTTGCGATGATTACTACTCGTGCCCTGCTGGAACCACATGCTGCTGCGCCTATGCTTATGGAAACTTCTGCTTTGGGTGGGGATGCTGCCCTATGGAGTCTGCAACCTGCTGCGATGACCACTACAGCTGCTGCCCTAGTGACTACCCCGTCTGCGACCTTGATGCTGGAACTTGCAGACTGAGCAAGAACAGTCCAGTGAGTGTGAAGGCCTTGAAGAGAACTTCAGCTATGCGTAACAAGCACTGGATGGGTGGCTGGGGTCTAAGAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0000932 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0004842 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005764 GO:0005773 GO:0005829 GO:0005911 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009888 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010494 GO:0010498 GO:0010605 GO:0016020 GO:0016049 GO:0016567 GO:0016740 GO:0016787 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030163 GO:0031146 GO:0031224 GO:0031225 GO:0031347 GO:0031348 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0035770 GO:0036211 GO:0036464 GO:0040007 GO:0042176 GO:0042177 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048046 GO:0048364 GO:0048468 GO:0048469 GO:0048519 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051603 GO:0051704 GO:0051707 GO:0055044 GO:0060255 GO:0060560 GO:0065007 GO:0070011 GO:0070647 GO:0071695 GO:0071704 GO:0080090 GO:0080134 GO:0080147 GO:0090558 GO:0090627 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

444

Amino Acids

48.99

Weight (kDa)

7.38

Isoelectric Point (pI)

36.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 27 - 83 1.1e-18 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 114 - 329 5.2e-88 Papain family cysteine protease
Granulin PF00396 366 - 412 5.9e-09 Granulin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014943)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36880
fragaria_vesca FvH4_2g05500
malus_domestica MD05G1086900.v1.1 MD12G1087000.v1.1
prunus_persica Prupe.8G131600_v2.0.a1
pyrus_communis pycom05g08620
rosa_chinensis RchiOBHm_Chr6g0255771
rosa_laevigata RLG00000014814
rosa_multiflora Rmu_sc0001163.1_g000010
rosa_roxburghii Rroxscaffold_7G00209680
rosa_rugosa Rorug05G0561400
rosa_samantha Rh6AG079300 Rh6BG072400 Rh6CG070600 Rh6DG067900
rosa_wichuraiana Rw6G006840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1208
Acc36I ACCTGC 1 cut(s) 1175
Acc65I GGTACC 2 cut(s) 614, 845
AccB1I GGYRCC 2 cut(s) 614, 845
AccII CGCG 1 cut(s) 227
AciI CCGC 5 cut(s) 103, 227, 284, 405, 939
AclWI GGATC 3 cut(s) 399, 626, 878
AcoI YGGCCR 1 cut(s) 285
AcsI RAATTY 1 cut(s) 764
AcuI CTGAAG 1 cut(s) 1269
AfaI GTAC 6 cut(s) 45, 80, 113, 248, 616, 847
AfiI CCNNNNNNNGG 6 cut(s) 226, 357, 610, 611, 899, 1013
AgeI ACCGGT 3 cut(s) 219, 249, 464
AgsI TTSAA 4 cut(s) 217, 709, 749, 1276
AjnI CCWGG 4 cut(s) 240, 287, 522, 1012
AjuI GAANNNNNNNTTGG 2 cut(s) 701, 733
AloI GAACNNNNNNTCC 2 cut(s) 125, 157
AluBI AGCT 7 cut(s) 472, 752, 772, 908, 1188, 1289, 1331
AluI AGCT 7 cut(s) 472, 752, 772, 908, 1188, 1289, 1331
AlwI GGATC 3 cut(s) 399, 626, 878
AlwNI CAGNNNCTG 1 cut(s) 1191
AoxI GGCC 8 cut(s) 60, 72, 285, 363, 397, 757, 1016, 1269
ApeKI GCWGC 6 cut(s) 1101, 1104, 1146, 1170, 1188, 1191
ApoI RAATTY 1 cut(s) 764
AsiGI ACCGGT 3 cut(s) 219, 249, 464
Asp700I GAANNNNTTC 2 cut(s) 221, 681
Asp718I GGTACC 2 cut(s) 614, 845
AspLEI GCGC 4 cut(s) 121, 374, 930, 1109
AspS9I GGNCC 6 cut(s) 54, 277, 363, 757, 890, 1016
AsuC2I CCSGG 4 cut(s) 281, 611, 761, 1043
AsuHPI GGTGA 4 cut(s) 79, 202, 479, 1057
AvaII GGWCC 3 cut(s) 54, 277, 890
BaeGI GKGCMC 1 cut(s) 1085
BaeI ACNNNNGTAYC 2 cut(s) 598, 631
BanI GGYRCC 2 cut(s) 614, 845
BarI GAAGNNNNNNTAC 2 cut(s) 62, 94
BauI CACGAG 2 cut(s) 651, 1078
BbsI GAAGAC 1 cut(s) 311
BbvI GCAGC 6 cut(s) 1088, 1091, 1133, 1157, 1175, 1178
BccI CCATC 5 cut(s) 662, 1027, 1036, 1060, 1303
BceAI ACGGC 2 cut(s) 46, 958
BcgI CGANNNNNNTGC 4 cut(s) 22, 56, 1205, 1239
BciT130I CCWGG 4 cut(s) 242, 289, 524, 1014
BcnI CCSGG 4 cut(s) 281, 611, 761, 1043
BfaI CTAG 3 cut(s) 815, 1008, 1197
BfmI CTRYAG 1 cut(s) 1183
BfoI RGCGCY 1 cut(s) 375
BfuAI ACCTGC 1 cut(s) 1175
BglII AGATCT 1 cut(s) 699
BisI GCNGC 8 cut(s) 285, 939, 1102, 1105, 1147, 1171, 1189, 1192
BlsI GCNGC 8 cut(s) 286, 940, 1103, 1106, 1148, 1172, 1190, 1193
Bme1390I CCNGG 8 cut(s) 242, 281, 289, 524, 611, 761, 1014, 1043
Bme18I GGWCC 3 cut(s) 54, 277, 890
BmgT120I GGNCC 6 cut(s) 54, 277, 363, 757, 890, 1016
BmiI GGNNCC 7 cut(s) 143, 616, 758, 808, 847, 891, 1093
BmrFI CCNGG 8 cut(s) 242, 281, 289, 524, 611, 761, 1014, 1043
BmrI ACTGGG 1 cut(s) 907
BmsI GCATC 3 cut(s) 518, 1133, 1213
BmuI ACTGGG 1 cut(s) 907
BpiI GAAGAC 1 cut(s) 311
BplI GAGNNNNNCTC 2 cut(s) 461, 493
BpmI CTGGAG 1 cut(s) 263
BpuMI CCSGG 4 cut(s) 281, 611, 761, 1043
BsaWI WCCGGW 4 cut(s) 195, 219, 249, 464
BsaXI ACNNNNNCTCC 4 cut(s) 125, 155, 236, 266
Bsc4I CCNNNNNNNGG 6 cut(s) 226, 357, 610, 611, 899, 1013
Bse118I RCCGGY 3 cut(s) 219, 249, 464
Bse1I ACTGG 5 cut(s) 799, 902, 952, 1256, 1310
Bse3DI GCAATG 3 cut(s) 538, 937, 960
BseBI CCWGG 4 cut(s) 242, 289, 524, 1014
BseGI GGATG 4 cut(s) 533, 1019, 1148, 1314
BseLI CCNNNNNNNGG 6 cut(s) 226, 357, 610, 611, 899, 1013
BseMI GCAATG 3 cut(s) 538, 937, 960
BseMII CTCAG 3 cut(s) 155, 477, 1232
BseNI ACTGG 5 cut(s) 799, 902, 952, 1256, 1310
BseRI GAGGAG 2 cut(s) 1023, 1026
BseSI GKGCMC 1 cut(s) 1085
BseXI GCAGC 6 cut(s) 1088, 1091, 1133, 1157, 1175, 1178
BseYI CCCAGC 4 cut(s) 121, 414, 752, 1317
BsgI GTGCAG 1 cut(s) 456
Bsh1236I CGCG 1 cut(s) 227
Bsh1285I CGRYCG 1 cut(s) 254
BshFI GGCC 8 cut(s) 62, 74, 287, 365, 399, 759, 1018, 1271
BshNI GGYRCC 2 cut(s) 614, 845
BshTI ACCGGT 3 cut(s) 219, 249, 464
BsiEI CGRYCG 1 cut(s) 254
BsiSI CCGG 8 cut(s) 196, 220, 250, 280, 465, 610, 760, 1043
BslFI GGGAC 1 cut(s) 347
BslI CCNNNNNNNGG 6 cut(s) 226, 357, 610, 611, 899, 1013
BsmFI GGGAC 1 cut(s) 347
BsnI GGCC 8 cut(s) 62, 74, 287, 365, 399, 759, 1018, 1271
Bsp1286I GDGCHC 1 cut(s) 1085
Bsp143I GATC 6 cut(s) 6, 391, 631, 699, 811, 870
Bsp19I CCATGG 1 cut(s) 820
BspACI CCGC 5 cut(s) 103, 227, 284, 405, 939
BspANI GGCC 8 cut(s) 62, 74, 287, 365, 399, 759, 1018, 1271
BspCNI CTCAG 3 cut(s) 156, 478, 1233
BspFNI CGCG 1 cut(s) 227
BspHI TCATGA 1 cut(s) 567
BspLI GGNNCC 7 cut(s) 143, 616, 758, 808, 847, 891, 1093
BspMI ACCTGC 1 cut(s) 1175
BspPI GGATC 3 cut(s) 399, 626, 878
BspT107I GGYRCC 2 cut(s) 614, 845
BsrDI GCAATG 3 cut(s) 538, 937, 960
BsrFI RCCGGY 3 cut(s) 219, 249, 464
BsrI ACTGG 5 cut(s) 799, 902, 952, 1256, 1310
BssAI RCCGGY 3 cut(s) 219, 249, 464
BssMI GATC 6 cut(s) 6, 391, 631, 699, 811, 870
BssSI CACGAG 2 cut(s) 651, 1078
BssT1I CCWWGG 2 cut(s) 366, 820
Bst2BI CACGAG 2 cut(s) 651, 1078
Bst2UI CCWGG 4 cut(s) 242, 289, 524, 1014
Bst4CI ACNGT 4 cut(s) 430, 835, 1060, 1253
Bst6I CTCTTC 1 cut(s) 1271
BstDEI CTNAG 4 cut(s) 164, 486, 1241, 1325
BstDSI CCRYGG 2 cut(s) 351, 820
BstF5I GGATG 4 cut(s) 533, 1019, 1148, 1314
BstFNI CGCG 1 cut(s) 227
BstH2I RGCGCY 1 cut(s) 375
BstHHI GCGC 4 cut(s) 121, 374, 930, 1109
BstKTI GATC 6 cut(s) 9, 394, 634, 702, 814, 873
BstMBI GATC 6 cut(s) 6, 391, 631, 699, 811, 870
BstMCI CGRYCG 1 cut(s) 254
BstMWI GCNNNNNNNGC 7 cut(s) 116, 371, 411, 749, 957, 1242, 1300
BstNI CCWGG 4 cut(s) 242, 289, 524, 1014
BstNSI RCATGY 1 cut(s) 1101
BstSCI CCNGG 8 cut(s) 240, 279, 287, 522, 609, 759, 1012, 1041
BstSFI CTRYAG 1 cut(s) 1183
BstSLI GKGCMC 1 cut(s) 1085
BstUI CGCG 1 cut(s) 227
BstV1I GCAGC 6 cut(s) 1088, 1091, 1133, 1157, 1175, 1178
BstV2I GAAGAC 1 cut(s) 311
BstX2I RGATCY 1 cut(s) 699
BstYI RGATCY 1 cut(s) 699
BsuRI GGCC 8 cut(s) 62, 74, 287, 365, 399, 759, 1018, 1271
BtgI CCRYGG 2 cut(s) 351, 820
BtgZI GCGATG 2 cut(s) 1080, 1188
BtsCI GGATG 4 cut(s) 533, 1019, 1148, 1314
BtsI GCAGTG 1 cut(s) 444
BtsIMutI CAGTG 4 cut(s) 444, 792, 1263, 1303
BveI ACCTGC 1 cut(s) 1175
CaiI CAGNNNCTG 1 cut(s) 1191
CciI TCATGA 1 cut(s) 567
CfoI GCGC 4 cut(s) 121, 374, 930, 1109
Cfr10I RCCGGY 3 cut(s) 219, 249, 464
Cfr13I GGNCC 6 cut(s) 54, 277, 363, 757, 890, 1016
CseI GACGC 1 cut(s) 807
Csp6I GTAC 6 cut(s) 44, 79, 112, 247, 615, 846
CspAI ACCGGT 3 cut(s) 219, 249, 464
CviAII CATG 7 cut(s) 34, 76, 568, 627, 821, 885, 1098
CviQI GTAC 6 cut(s) 44, 79, 112, 247, 615, 846
DdeI CTNAG 4 cut(s) 164, 486, 1241, 1325
DpnI GATC 6 cut(s) 8, 393, 633, 701, 813, 872
DpnII GATC 6 cut(s) 6, 391, 631, 699, 811, 870
DrdI GACNNNNNNGTC 1 cut(s) 1208
DseDI GACNNNNNNGTC 1 cut(s) 1208
EaeI YGGCCR 1 cut(s) 285
Eam1104I CTCTTC 1 cut(s) 1271
EarI CTCTTC 1 cut(s) 1271
Eco130I CCWWGG 2 cut(s) 366, 820
Eco147I AGGCCT 1 cut(s) 1271
Eco47I GGWCC 3 cut(s) 54, 277, 890
Eco57I CTGAAG 1 cut(s) 1269
EcoO109I RGGNCCY 1 cut(s) 890
EcoRI GAATTC 1 cut(s) 764
EcoRII CCWGG 4 cut(s) 240, 287, 522, 1012
EcoT14I CCWWGG 2 cut(s) 366, 820
ErhI CCWWGG 2 cut(s) 366, 820
FaeI CATG 7 cut(s) 37, 79, 571, 630, 824, 888, 1101
FaqI GGGAC 1 cut(s) 347
FatI CATG 7 cut(s) 33, 75, 567, 626, 820, 884, 1097
FauI CCCGC 1 cut(s) 398
Fnu4HI GCNGC 8 cut(s) 285, 939, 1102, 1105, 1147, 1171, 1189, 1192
FokI GGATG 4 cut(s) 540, 1006, 1155, 1321
Fsp4HI GCNGC 8 cut(s) 285, 939, 1102, 1105, 1147, 1171, 1189, 1192
FspBI CTAG 3 cut(s) 815, 1008, 1197
GlaI GCGC 4 cut(s) 120, 373, 929, 1108
GluI GCNGC 8 cut(s) 285, 939, 1102, 1105, 1147, 1171, 1189, 1192
GsaI CCCAGC 4 cut(s) 125, 418, 756, 1321
GsuI CTGGAG 1 cut(s) 263
HaeII RGCGCY 1 cut(s) 375
HaeIII GGCC 8 cut(s) 62, 74, 287, 365, 399, 759, 1018, 1271
HapII CCGG 8 cut(s) 196, 220, 250, 280, 465, 610, 760, 1043
HgaI GACGC 1 cut(s) 807
HhaI GCGC 4 cut(s) 121, 374, 930, 1109
Hin1II CATG 7 cut(s) 37, 79, 571, 630, 824, 888, 1101
Hin6I GCGC 4 cut(s) 119, 372, 928, 1107
HinP1I GCGC 4 cut(s) 119, 372, 928, 1107
HinfI GANTC 6 cut(s) 25, 83, 347, 587, 1048, 1157
HpaII CCGG 8 cut(s) 196, 220, 250, 280, 465, 610, 760, 1043
HphI GGTGA 4 cut(s) 79, 202, 479, 1057
Hpy166II GTNNAC 2 cut(s) 193, 451
Hpy188I TCNGA 5 cut(s) 165, 382, 487, 592, 999
Hpy188III TCNNGA 4 cut(s) 145, 568, 815, 874
Hpy8I GTNNAC 2 cut(s) 193, 451
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 9 cut(s) 64, 124, 132, 268, 437, 565, 706, 985, 1261
HpyCH4III ACNGT 4 cut(s) 430, 835, 1060, 1253
HpyCH4V TGCA 4 cut(s) 437, 531, 1163, 1236
HpyF10VI GCNNNNNNNGC 7 cut(s) 116, 371, 411, 749, 957, 1242, 1300
HpyF3I CTNAG 4 cut(s) 164, 486, 1241, 1325
Hsp92II CATG 7 cut(s) 37, 79, 571, 630, 824, 888, 1101
HspAI GCGC 4 cut(s) 119, 372, 928, 1107
KpnI GGTACC 2 cut(s) 618, 849
Kzo9I GATC 6 cut(s) 6, 391, 631, 699, 811, 870
LmnI GCTCC 1 cut(s) 925
Lsp1109I GCAGC 6 cut(s) 1088, 1091, 1133, 1157, 1175, 1178
LweI GCATC 3 cut(s) 518, 1133, 1213
MaeI CTAG 3 cut(s) 815, 1008, 1197
MaeIII GTNAC 5 cut(s) 200, 460, 911, 1199, 1295
MalI GATC 6 cut(s) 8, 393, 633, 701, 813, 872
MboI GATC 6 cut(s) 6, 391, 631, 699, 811, 870
MboII GAAGA 6 cut(s) 283, 316, 689, 721, 889, 1288
MflI RGATCY 1 cut(s) 699
MhlI GDGCHC 1 cut(s) 1085
MluCI AATT 2 cut(s) 560, 764
MlyI GAGTC 3 cut(s) 92, 341, 1166
MmeI TCCRAC 1 cut(s) 903
MroXI GAANNNNTTC 2 cut(s) 221, 681
MseI TTAA 2 cut(s) 153, 387
MspA1I CMGCKG 1 cut(s) 1188
MspI CCGG 8 cut(s) 196, 220, 250, 280, 465, 610, 760, 1043
MspR9I CCNGG 8 cut(s) 242, 281, 289, 524, 611, 761, 1014, 1043
MvaI CCWGG 4 cut(s) 242, 289, 524, 1014
MvnI CGCG 1 cut(s) 227
MwoI GCNNNNNNNGC 7 cut(s) 116, 371, 411, 749, 957, 1242, 1300
NciI CCSGG 4 cut(s) 281, 611, 761, 1043
NcoI CCATGG 1 cut(s) 820
NdeII GATC 6 cut(s) 6, 391, 631, 699, 811, 870
NlaIII CATG 7 cut(s) 37, 79, 571, 630, 824, 888, 1101
NlaIV GGNNCC 7 cut(s) 143, 616, 758, 808, 847, 891, 1093
NmeAIII GCCGAG 1 cut(s) 88
NmuCI GTSAC 2 cut(s) 460, 1199
NspI RCATGY 1 cut(s) 1101
PagI TCATGA 1 cut(s) 567
PceI AGGCCT 1 cut(s) 1271
PdmI GAANNNNTTC 2 cut(s) 221, 681
PfeI GAWTC 3 cut(s) 25, 587, 1048
PinAI ACCGGT 3 cut(s) 219, 249, 464
PkrI GCNGC 8 cut(s) 286, 940, 1103, 1106, 1148, 1172, 1190, 1193
PleI GAGTC 3 cut(s) 91, 341, 1165
PpsI GAGTC 3 cut(s) 91, 341, 1165
PpuMI RGGWCCY 1 cut(s) 890
Psp5II RGGWCCY 1 cut(s) 890
Psp6I CCWGG 4 cut(s) 240, 287, 522, 1012
PspFI CCCAGC 4 cut(s) 121, 414, 752, 1317
PspGI CCWGG 4 cut(s) 240, 287, 522, 1012
PspN4I GGNNCC 7 cut(s) 143, 616, 758, 808, 847, 891, 1093
PspPI GGNCC 6 cut(s) 54, 277, 363, 757, 890, 1016
PspPPI RGGWCCY 1 cut(s) 890
PsrI GAACNNNNNNTAC 4 cut(s) 185, 217, 607, 639
PstNI CAGNNNCTG 1 cut(s) 1191
PsuI RGATCY 1 cut(s) 699
PvuII CAGCTG 1 cut(s) 1188
RsaI GTAC 6 cut(s) 45, 80, 113, 248, 616, 847
RsaNI GTAC 6 cut(s) 44, 79, 112, 247, 615, 846
SaqAI TTAA 2 cut(s) 153, 387
SatI GCNGC 8 cut(s) 285, 939, 1102, 1105, 1147, 1171, 1189, 1192
Sau3AI GATC 6 cut(s) 6, 391, 631, 699, 811, 870
Sau96I GGNCC 6 cut(s) 54, 277, 363, 757, 890, 1016
SchI GAGTC 3 cut(s) 92, 341, 1166
ScrFI CCNGG 8 cut(s) 242, 281, 289, 524, 611, 761, 1014, 1043
SduI GDGCHC 1 cut(s) 1085
SfaNI GCATC 3 cut(s) 518, 1133, 1213
SfcI CTRYAG 1 cut(s) 1183
SinI GGWCC 3 cut(s) 54, 277, 890
Sse9I AATT 2 cut(s) 560, 764
SseBI AGGCCT 1 cut(s) 1271
SsiI CCGC 5 cut(s) 103, 227, 284, 405, 939
SspMI CTAG 3 cut(s) 815, 1008, 1197
StuI AGGCCT 1 cut(s) 1271
StyD4I CCNGG 8 cut(s) 240, 279, 287, 522, 609, 759, 1012, 1041
StyI CCWWGG 2 cut(s) 366, 820
TaaI ACNGT 4 cut(s) 430, 835, 1060, 1253
TaqI TCGA 4 cut(s) 5, 12, 174, 254
TaqII GACCGA 1 cut(s) 71
TasI AATT 2 cut(s) 560, 764
TauI GCSGC 2 cut(s) 287, 941
TfiI GAWTC 3 cut(s) 25, 587, 1048
Tru1I TTAA 2 cut(s) 153, 387
Tru9I TTAA 2 cut(s) 153, 387
TscAI CASTG 4 cut(s) 444, 799, 1263, 1310
TseFI GTSAC 2 cut(s) 460, 1199
TseI GCWGC 6 cut(s) 1101, 1104, 1146, 1170, 1188, 1191
Tsp45I GTSAC 2 cut(s) 460, 1199
TspDTI ATGAA 6 cut(s) 160, 284, 553, 584, 615, 690
TspGWI ACGGA 1 cut(s) 340
TspRI CASTG 4 cut(s) 444, 799, 1263, 1310
VpaK11BI GGWCC 3 cut(s) 54, 277, 890
XapI RAATTY 1 cut(s) 764
XbaI TCTAGA 1 cut(s) 814
XceI RCATGY 1 cut(s) 1101
XcmI CCANNNNNNNNNTGG 1 cut(s) 530
XmnI GAANNNNTTC 2 cut(s) 221, 681
XspI CTAG 3 cut(s) 815, 1008, 1197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.