Rh6BG072400

Belongs to the peptidase C1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0014943
Physical Location & Seq
Reverse (-)
10922026 .. 10924825
2800 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG072400.1

Sequence Viewer

Length: 1431 bp
ATGGGTCTCTTTTCGCTTTCATCCCGATCTTCTGGGTCCGCCATGGCCGTCGCCGTTTTCTTCTTCCTCTTCCTCGGCCTAGCTTCTGCCGCCGACATGTCGATCATCGACTACGACAAGAAACACGGCATGGGTGTCGTACCAGAAAGGACCGAGGCCGAGGTGAAGGCCATGTACGAGTCGTGGCTGGTCAAACACCGCAAGGCGTACAATGCGCTGGGCGAGAAGGAGAGAAGGTTCCAGATTTTTAAGGATAATCTGAGGTTCATCGACGAGCATAACAAGGTGAACCGGAGTTATAAGGTGGGCTTGAACCGGTTCGCGGATATGACTAACCTGGAGTACCGGTCGAGGTTCTTGGGGATGAAGAAGGACCGGGCTGCCAGGCTTTCAGGTGGGAAGACGGGTCGGTATGCGTATCGGGTCGGGGACAAGTTGCCCGACTCCGTGGATTGGAGGGCCAAGGGCGCTGTTTCCGAGGTTAAGGATCAAGGCCAATGCGGGAGTTGCTGGGCTTTCTCAACGGTTGGGGCAGTGGAAGGTGTAAACCAGATTGTGACCGGTGAGCTAATCTCATTGTCTGAGCAAGAACTTGTGGATTGTGATAAATCCTACAACCAGGGATGCAATGGAGGTCTTATGGACTATGCCTTCCAATTCATCATGAACAATGGTGGCATTGATTCTGAGGCTGATTACCCTTACCGGGGTACCGAGGGTTCATGTGATCCCAACAGGAAAAATGCTCGTGTTGTTTCCATTGATGGATATGAAGATGTTCCACAAAATGATGAGATCTCTTTGAAGAAGGCTTTGGCACATCAACCCGTGAGTGTTGCCATTGAAGCTGGGGGCCGAGAATTCCAGCTCTACCAATCGGGTGTATTCACTGGACGCTGTGGAACCGATCTAGACCATGGTGTGCTTACTGTTGGGTATGGTACCGACAATGGCAAGGACTACTGGATCGTGAAGAACTCATGGGGTCCTAACTGGGGAGAAGCTGGTTACATCAGGTTGGAGCGCAATGTAGCAGCCAAGACTGGCAAATGTGGCATTGCCATTGAGCCGTCATACCCAACAAAGAAGGGTCAGAACCCTCCTAGACCTGGCCCATCCCCTCCATCTCCTCCTCCCCCGGTGAATCCATCAACTGTTTGCGACGATTACTACTCATGCCCTGCTGGAACCACATGCTGCTGCGCCTATGCTTATGGAAACTTCTGCTTTGGGTGGGGATGCTGCCCTATGGAGTCTGCAACCTGCTGCGATGACCACTACAGCTGCTGCCCTAGTGACTACCCCGTCTGCGACCTTGATGCTGGAACTTGCAGACTGAGCAAGAACAGTCCGGTGAGTGTGAAGTCCTTGAAGAGAACTTCAGCTATGCATAACAAGCGCTGGATGGGTGGCTGGGGTCTAAGAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0000932 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0004842 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005764 GO:0005773 GO:0005829 GO:0005911 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009888 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010494 GO:0010498 GO:0010605 GO:0016020 GO:0016049 GO:0016567 GO:0016740 GO:0016787 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030163 GO:0031146 GO:0031224 GO:0031225 GO:0031347 GO:0031348 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0035770 GO:0036211 GO:0036464 GO:0040007 GO:0042176 GO:0042177 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048046 GO:0048364 GO:0048468 GO:0048469 GO:0048519 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051603 GO:0051704 GO:0051707 GO:0055044 GO:0060255 GO:0060560 GO:0065007 GO:0070011 GO:0070647 GO:0071695 GO:0071704 GO:0080090 GO:0080134 GO:0080147 GO:0090558 GO:0090627 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

476

Amino Acids

52.26

Weight (kDa)

7.72

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 59 - 115 1.2e-18 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 146 - 361 6.2e-88 Papain family cysteine protease
Granulin PF00396 398 - 444 6.3e-09 Granulin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014943)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36880
fragaria_vesca FvH4_2g05500
malus_domestica MD05G1086900.v1.1 MD12G1087000.v1.1
prunus_persica Prupe.8G131600_v2.0.a1
pyrus_communis pycom05g08620
rosa_chinensis RchiOBHm_Chr6g0255771
rosa_laevigata RLG00000014814
rosa_multiflora Rmu_sc0001163.1_g000010
rosa_roxburghii Rroxscaffold_7G00209680
rosa_rugosa Rorug05G0561400
rosa_samantha Rh6AG079300 Rh6BG072400 Rh6CG070600 Rh6DG067900
rosa_wichuraiana Rw6G006840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 300
AasI GACNNNNNNGTC 1 cut(s) 1304
Acc36I ACCTGC 1 cut(s) 1271
Acc65I GGTACC 2 cut(s) 710, 941
AccB1I GGYRCC 2 cut(s) 710, 941
AccII CGCG 1 cut(s) 323
AciI CCGC 5 cut(s) 39, 90, 199, 323, 501
AclWI GGATC 3 cut(s) 495, 722, 974
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 1 cut(s) 860
AcuI CTGAAG 1 cut(s) 1365
AfaI GTAC 6 cut(s) 141, 176, 209, 344, 712, 943
AfeI AGCGCT 1 cut(s) 1400
AfiI CCNNNNNNNGG 6 cut(s) 322, 453, 706, 707, 995, 1109
AflIII ACRYGT 1 cut(s) 96
AgeI ACCGGT 3 cut(s) 315, 345, 560
AgsI TTSAA 4 cut(s) 313, 805, 845, 1372
AjnI CCWGG 4 cut(s) 336, 383, 618, 1108
AjuI GAANNNNNNNTTGG 2 cut(s) 797, 829
AloI GAACNNNNNNTCC 2 cut(s) 221, 253
AluBI AGCT 8 cut(s) 83, 568, 848, 868, 1004, 1284, 1385, 1427
AluI AGCT 8 cut(s) 83, 568, 848, 868, 1004, 1284, 1385, 1427
Alw26I GTCTC 1 cut(s) 11
AlwI GGATC 3 cut(s) 495, 722, 974
AlwNI CAGNNNCTG 1 cut(s) 1287
Aor51HI AGCGCT 1 cut(s) 1400
AoxI GGCC 8 cut(s) 45, 76, 156, 168, 459, 493, 853, 1111
ApeKI GCWGC 8 cut(s) 380, 1034, 1197, 1200, 1242, 1266, 1284, 1287
ApoI RAATTY 1 cut(s) 860
AsiGI ACCGGT 3 cut(s) 315, 345, 560
Asp700I GAANNNNTTC 2 cut(s) 317, 777
Asp718I GGTACC 2 cut(s) 710, 941
AspLEI GCGC 5 cut(s) 217, 470, 1026, 1205, 1401
AspS9I GGNCC 7 cut(s) 36, 150, 373, 459, 853, 986, 1112
AsuC2I CCSGG 3 cut(s) 377, 707, 1139
AsuHPI GGTGA 5 cut(s) 175, 298, 575, 1153, 1366
AvaII GGWCC 4 cut(s) 36, 150, 373, 986
BaeI ACNNNNGTAYC 2 cut(s) 694, 727
BanI GGYRCC 2 cut(s) 710, 941
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
BauI CACGAG 1 cut(s) 747
BbsI GAAGAC 1 cut(s) 407
BbvI GCAGC 8 cut(s) 367, 1046, 1184, 1187, 1229, 1253, 1271, 1274
BccI CCATC 5 cut(s) 758, 1123, 1132, 1156, 1399
BceAI ACGGC 4 cut(s) 32, 38, 142, 1054
BcgI CGANNNNNNTGC 4 cut(s) 118, 152, 1301, 1335
BciT130I CCWGG 4 cut(s) 338, 385, 620, 1110
BcnI CCSGG 3 cut(s) 377, 707, 1139
BcoDI GTCTC 1 cut(s) 11
BfaI CTAG 4 cut(s) 80, 911, 1104, 1293
BfmI CTRYAG 1 cut(s) 1279
BfoI RGCGCY 2 cut(s) 471, 1402
BfuAI ACCTGC 1 cut(s) 1271
BglII AGATCT 1 cut(s) 795
BisI GCNGC 9 cut(s) 90, 381, 1035, 1198, 1201, 1243, 1267, 1285, 1288
BlsI GCNGC 9 cut(s) 91, 382, 1036, 1199, 1202, 1244, 1268, 1286, 1289
Bme1390I CCNGG 7 cut(s) 338, 377, 385, 620, 707, 1110, 1139
Bme18I GGWCC 4 cut(s) 36, 150, 373, 986
BmgT120I GGNCC 7 cut(s) 36, 150, 373, 459, 853, 986, 1112
BmiI GGNNCC 8 cut(s) 37, 239, 712, 854, 904, 943, 987, 1189
BmrFI CCNGG 7 cut(s) 338, 377, 385, 620, 707, 1110, 1139
BmrI ACTGGG 1 cut(s) 1003
BmsI GCATC 3 cut(s) 614, 1229, 1309
BmuI ACTGGG 1 cut(s) 1003
BpiI GAAGAC 1 cut(s) 407
BplI GAGNNNNNCTC 2 cut(s) 557, 589
BpmI CTGGAG 1 cut(s) 359
BpuMI CCSGG 3 cut(s) 377, 707, 1139
BsaI GGTCTC 1 cut(s) 11
BsaWI WCCGGW 5 cut(s) 291, 315, 345, 560, 1351
BsaXI ACNNNNNCTCC 4 cut(s) 221, 251, 332, 362
Bsc4I CCNNNNNNNGG 6 cut(s) 322, 453, 706, 707, 995, 1109
Bse118I RCCGGY 3 cut(s) 315, 345, 560
Bse1I ACTGG 4 cut(s) 895, 968, 998, 1048
Bse3DI GCAATG 3 cut(s) 634, 1033, 1056
BseBI CCWGG 4 cut(s) 338, 385, 620, 1110
BseGI GGATG 6 cut(s) 20, 369, 629, 1115, 1244, 1410
BseLI CCNNNNNNNGG 6 cut(s) 322, 453, 706, 707, 995, 1109
BseMI GCAATG 3 cut(s) 634, 1033, 1056
BseMII CTCAG 4 cut(s) 251, 573, 678, 1328
BseNI ACTGG 4 cut(s) 895, 968, 998, 1048
BseRI GAGGAG 2 cut(s) 1119, 1122
BseXI GCAGC 8 cut(s) 367, 1046, 1184, 1187, 1229, 1253, 1271, 1274
BseYI CCCAGC 4 cut(s) 217, 510, 848, 1413
Bsh1236I CGCG 1 cut(s) 323
Bsh1285I CGRYCG 1 cut(s) 350
BshFI GGCC 8 cut(s) 47, 78, 158, 170, 461, 495, 855, 1113
BshNI GGYRCC 2 cut(s) 710, 941
BshTI ACCGGT 3 cut(s) 315, 345, 560
BsiEI CGRYCG 1 cut(s) 350
BsiSI CCGG 8 cut(s) 292, 316, 346, 376, 561, 706, 1139, 1352
BslFI GGGAC 1 cut(s) 443
BslI CCNNNNNNNGG 6 cut(s) 322, 453, 706, 707, 995, 1109
BsmAI GTCTC 1 cut(s) 11
BsmFI GGGAC 1 cut(s) 443
BsnI GGCC 8 cut(s) 47, 78, 158, 170, 461, 495, 855, 1113
Bso31I GGTCTC 1 cut(s) 11
Bsp143I GATC 7 cut(s) 26, 102, 487, 727, 795, 907, 966
Bsp19I CCATGG 2 cut(s) 42, 916
BspACI CCGC 5 cut(s) 39, 90, 199, 323, 501
BspANI GGCC 8 cut(s) 47, 78, 158, 170, 461, 495, 855, 1113
BspCNI CTCAG 4 cut(s) 252, 574, 679, 1329
BspFNI CGCG 1 cut(s) 323
BspHI TCATGA 1 cut(s) 663
BspLI GGNNCC 8 cut(s) 37, 239, 712, 854, 904, 943, 987, 1189
BspMI ACCTGC 1 cut(s) 1271
BspPI GGATC 3 cut(s) 495, 722, 974
BspT107I GGYRCC 2 cut(s) 710, 941
BspTNI GGTCTC 1 cut(s) 11
BsrDI GCAATG 3 cut(s) 634, 1033, 1056
BsrFI RCCGGY 3 cut(s) 315, 345, 560
BsrI ACTGG 4 cut(s) 895, 968, 998, 1048
BssAI RCCGGY 3 cut(s) 315, 345, 560
BssMI GATC 7 cut(s) 26, 102, 487, 727, 795, 907, 966
BssSI CACGAG 1 cut(s) 747
BssT1I CCWWGG 3 cut(s) 42, 462, 916
Bst2BI CACGAG 1 cut(s) 747
Bst2UI CCWGG 4 cut(s) 338, 385, 620, 1110
Bst4CI ACNGT 4 cut(s) 526, 931, 1156, 1349
Bst6I CTCTTC 2 cut(s) 74, 1367
BstDEI CTNAG 5 cut(s) 260, 582, 687, 1337, 1421
BstDSI CCRYGG 3 cut(s) 42, 447, 916
BstF5I GGATG 6 cut(s) 20, 369, 629, 1115, 1244, 1410
BstFNI CGCG 1 cut(s) 323
BstH2I RGCGCY 2 cut(s) 471, 1402
BstHHI GCGC 5 cut(s) 217, 470, 1026, 1205, 1401
BstKTI GATC 7 cut(s) 29, 105, 490, 730, 798, 910, 969
BstMAI GTCTC 1 cut(s) 11
BstMBI GATC 7 cut(s) 26, 102, 487, 727, 795, 907, 966
BstMCI CGRYCG 1 cut(s) 350
BstMWI GCNNNNNNNGC 8 cut(s) 89, 212, 467, 507, 845, 1053, 1338, 1396
BstNI CCWGG 4 cut(s) 338, 385, 620, 1110
BstNSI RCATGY 2 cut(s) 100, 1197
BstSCI CCNGG 7 cut(s) 336, 375, 383, 618, 705, 1108, 1137
BstSFI CTRYAG 1 cut(s) 1279
BstUI CGCG 1 cut(s) 323
BstV1I GCAGC 8 cut(s) 367, 1046, 1184, 1187, 1229, 1253, 1271, 1274
BstV2I GAAGAC 1 cut(s) 407
BstX2I RGATCY 1 cut(s) 795
BstYI RGATCY 1 cut(s) 795
BsuRI GGCC 8 cut(s) 47, 78, 158, 170, 461, 495, 855, 1113
BtgI CCRYGG 3 cut(s) 42, 447, 916
BtgZI GCGATG 1 cut(s) 1284
BtsCI GGATG 6 cut(s) 20, 369, 629, 1115, 1244, 1410
BtsI GCAGTG 1 cut(s) 540
BtsIMutI CAGTG 2 cut(s) 540, 888
BveI ACCTGC 1 cut(s) 1271
CaiI CAGNNNCTG 1 cut(s) 1287
CciI TCATGA 1 cut(s) 663
CfoI GCGC 5 cut(s) 217, 470, 1026, 1205, 1401
Cfr10I RCCGGY 3 cut(s) 315, 345, 560
Cfr13I GGNCC 7 cut(s) 36, 150, 373, 459, 853, 986, 1112
CseI GACGC 1 cut(s) 903
Csp6I GTAC 6 cut(s) 140, 175, 208, 343, 711, 942
CspAI ACCGGT 3 cut(s) 315, 345, 560
CviQI GTAC 6 cut(s) 140, 175, 208, 343, 711, 942
DdeI CTNAG 5 cut(s) 260, 582, 687, 1337, 1421
DpnI GATC 7 cut(s) 28, 104, 489, 729, 797, 909, 968
DpnII GATC 7 cut(s) 26, 102, 487, 727, 795, 907, 966
DrdI GACNNNNNNGTC 1 cut(s) 1304
DseDI GACNNNNNNGTC 1 cut(s) 1304
EaeI YGGCCR 1 cut(s) 45
Eam1104I CTCTTC 2 cut(s) 74, 1367
EarI CTCTTC 2 cut(s) 74, 1367
EciI GGCGGA 1 cut(s) 28
Eco130I CCWWGG 3 cut(s) 42, 462, 916
Eco31I GGTCTC 1 cut(s) 11
Eco47I GGWCC 4 cut(s) 36, 150, 373, 986
Eco47III AGCGCT 1 cut(s) 1400
Eco57I CTGAAG 1 cut(s) 1365
EcoO109I RGGNCCY 1 cut(s) 986
EcoRI GAATTC 1 cut(s) 860
EcoRII CCWGG 4 cut(s) 336, 383, 618, 1108
EcoT14I CCWWGG 3 cut(s) 42, 462, 916
EcoT22I ATGCAT 1 cut(s) 1392
ErhI CCWWGG 3 cut(s) 42, 462, 916
FalI AAGNNNNNCTT 2 cut(s) 293, 325
FaqI GGGAC 1 cut(s) 443
FauI CCCGC 1 cut(s) 494
Fnu4HI GCNGC 9 cut(s) 90, 381, 1035, 1198, 1201, 1243, 1267, 1285, 1288
FokI GGATG 6 cut(s) 7, 376, 636, 1102, 1251, 1417
Fsp4HI GCNGC 9 cut(s) 90, 381, 1035, 1198, 1201, 1243, 1267, 1285, 1288
FspBI CTAG 4 cut(s) 80, 911, 1104, 1293
GlaI GCGC 5 cut(s) 216, 469, 1025, 1204, 1400
GluI GCNGC 9 cut(s) 90, 381, 1035, 1198, 1201, 1243, 1267, 1285, 1288
GsaI CCCAGC 4 cut(s) 221, 514, 852, 1417
GsuI CTGGAG 1 cut(s) 359
HaeII RGCGCY 2 cut(s) 471, 1402
HaeIII GGCC 8 cut(s) 47, 78, 158, 170, 461, 495, 855, 1113
HapII CCGG 8 cut(s) 292, 316, 346, 376, 561, 706, 1139, 1352
HgaI GACGC 1 cut(s) 903
HhaI GCGC 5 cut(s) 217, 470, 1026, 1205, 1401
Hin6I GCGC 5 cut(s) 215, 468, 1024, 1203, 1399
HinP1I GCGC 5 cut(s) 215, 468, 1024, 1203, 1399
HinfI GANTC 5 cut(s) 179, 443, 683, 1144, 1253
HpaII CCGG 8 cut(s) 292, 316, 346, 376, 561, 706, 1139, 1352
HphI GGTGA 5 cut(s) 175, 298, 575, 1153, 1366
Hpy166II GTNNAC 2 cut(s) 289, 547
Hpy188I TCNGA 5 cut(s) 261, 478, 583, 688, 1095
Hpy188III TCNNGA 5 cut(s) 24, 241, 664, 911, 970
Hpy8I GTNNAC 2 cut(s) 289, 547
Hpy99I CGWCG 3 cut(s) 53, 275, 1166
HpyAV CCTTC 8 cut(s) 160, 220, 228, 364, 533, 661, 802, 1081
HpyCH4III ACNGT 4 cut(s) 526, 931, 1156, 1349
HpyCH4V TGCA 4 cut(s) 627, 1259, 1332, 1390
HpyF10VI GCNNNNNNNGC 8 cut(s) 89, 212, 467, 507, 845, 1053, 1338, 1396
HpyF3I CTNAG 5 cut(s) 260, 582, 687, 1337, 1421
HspAI GCGC 5 cut(s) 215, 468, 1024, 1203, 1399
KpnI GGTACC 2 cut(s) 714, 945
Kzo9I GATC 7 cut(s) 26, 102, 487, 727, 795, 907, 966
LmnI GCTCC 1 cut(s) 1021
Lsp1109I GCAGC 8 cut(s) 367, 1046, 1184, 1187, 1229, 1253, 1271, 1274
LweI GCATC 3 cut(s) 614, 1229, 1309
MaeI CTAG 4 cut(s) 80, 911, 1104, 1293
MaeIII GTNAC 3 cut(s) 556, 1007, 1295
MalI GATC 7 cut(s) 28, 104, 489, 729, 797, 909, 968
MboI GATC 7 cut(s) 26, 102, 487, 727, 795, 907, 966
MflI RGATCY 1 cut(s) 795
MluCI AATT 2 cut(s) 656, 860
MlyI GAGTC 3 cut(s) 188, 437, 1262
MmeI TCCRAC 1 cut(s) 999
Mph1103I ATGCAT 1 cut(s) 1392
MroXI GAANNNNTTC 2 cut(s) 317, 777
MseI TTAA 2 cut(s) 249, 483
MspA1I CMGCKG 1 cut(s) 1284
MspI CCGG 8 cut(s) 292, 316, 346, 376, 561, 706, 1139, 1352
MspR9I CCNGG 7 cut(s) 338, 377, 385, 620, 707, 1110, 1139
MvaI CCWGG 4 cut(s) 338, 385, 620, 1110
MvnI CGCG 1 cut(s) 323
MwoI GCNNNNNNNGC 8 cut(s) 89, 212, 467, 507, 845, 1053, 1338, 1396
NciI CCSGG 3 cut(s) 377, 707, 1139
NcoI CCATGG 2 cut(s) 42, 916
NdeII GATC 7 cut(s) 26, 102, 487, 727, 795, 907, 966
NlaIV GGNNCC 8 cut(s) 37, 239, 712, 854, 904, 943, 987, 1189
NmeAIII GCCGAG 3 cut(s) 54, 184, 881
NmuCI GTSAC 2 cut(s) 556, 1295
NsiI ATGCAT 1 cut(s) 1392
NspI RCATGY 2 cut(s) 100, 1197
PagI TCATGA 1 cut(s) 663
PciI ACATGT 1 cut(s) 96
PdmI GAANNNNTTC 2 cut(s) 317, 777
PfeI GAWTC 2 cut(s) 683, 1144
PinAI ACCGGT 3 cut(s) 315, 345, 560
PkrI GCNGC 9 cut(s) 91, 382, 1036, 1199, 1202, 1244, 1268, 1286, 1289
PleI GAGTC 3 cut(s) 187, 437, 1261
PpsI GAGTC 3 cut(s) 187, 437, 1261
PpuMI RGGWCCY 1 cut(s) 986
PscI ACATGT 1 cut(s) 96
PsiI TTATAA 1 cut(s) 300
Psp5II RGGWCCY 1 cut(s) 986
Psp6I CCWGG 4 cut(s) 336, 383, 618, 1108
PspFI CCCAGC 4 cut(s) 217, 510, 848, 1413
PspGI CCWGG 4 cut(s) 336, 383, 618, 1108
PspN4I GGNNCC 8 cut(s) 37, 239, 712, 854, 904, 943, 987, 1189
PspPI GGNCC 7 cut(s) 36, 150, 373, 459, 853, 986, 1112
PspPPI RGGWCCY 1 cut(s) 986
PsrI GAACNNNNNNTAC 2 cut(s) 703, 735
PstNI CAGNNNCTG 1 cut(s) 1287
PsuI RGATCY 1 cut(s) 795
PvuII CAGCTG 1 cut(s) 1284
RsaI GTAC 6 cut(s) 141, 176, 209, 344, 712, 943
RsaNI GTAC 6 cut(s) 140, 175, 208, 343, 711, 942
SaqAI TTAA 2 cut(s) 249, 483
SatI GCNGC 9 cut(s) 90, 381, 1035, 1198, 1201, 1243, 1267, 1285, 1288
Sau3AI GATC 7 cut(s) 26, 102, 487, 727, 795, 907, 966
Sau96I GGNCC 7 cut(s) 36, 150, 373, 459, 853, 986, 1112
SchI GAGTC 3 cut(s) 188, 437, 1262
ScrFI CCNGG 7 cut(s) 338, 377, 385, 620, 707, 1110, 1139
SfaNI GCATC 3 cut(s) 614, 1229, 1309
SfcI CTRYAG 1 cut(s) 1279
SinI GGWCC 4 cut(s) 36, 150, 373, 986
Sse9I AATT 2 cut(s) 656, 860
SsiI CCGC 5 cut(s) 39, 90, 199, 323, 501
SspMI CTAG 4 cut(s) 80, 911, 1104, 1293
StyD4I CCNGG 7 cut(s) 336, 375, 383, 618, 705, 1108, 1137
StyI CCWWGG 3 cut(s) 42, 462, 916
TaaI ACNGT 4 cut(s) 526, 931, 1156, 1349
TaqI TCGA 4 cut(s) 101, 108, 270, 350
TaqII GACCGA 1 cut(s) 167
TasI AATT 2 cut(s) 656, 860
TauI GCSGC 1 cut(s) 92
TfiI GAWTC 2 cut(s) 683, 1144
Tru1I TTAA 2 cut(s) 249, 483
Tru9I TTAA 2 cut(s) 249, 483
TscAI CASTG 2 cut(s) 540, 895
TseFI GTSAC 2 cut(s) 556, 1295
TseI GCWGC 8 cut(s) 380, 1034, 1197, 1200, 1242, 1266, 1284, 1287
Tsp45I GTSAC 2 cut(s) 556, 1295
TspDTI ATGAA 7 cut(s) 9, 256, 380, 649, 680, 711, 786
TspGWI ACGGA 1 cut(s) 436
TspRI CASTG 2 cut(s) 540, 895
VpaK11BI GGWCC 4 cut(s) 36, 150, 373, 986
XapI RAATTY 1 cut(s) 860
XbaI TCTAGA 1 cut(s) 910
XceI RCATGY 2 cut(s) 100, 1197
XcmI CCANNNNNNNNNTGG 1 cut(s) 626
XmnI GAANNNNTTC 2 cut(s) 317, 777
XspI CTAG 4 cut(s) 80, 911, 1104, 1293
Zsp2I ATGCAT 1 cut(s) 1392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.