pycom05g10080

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
13436067 .. 13439999
3933 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g10080.4

Sequence Viewer

Length: 1527 bp
ATGTGGGGTGTTAGAGTCAAATTCCAAGCTTTAGTTCATTACTGGCAGAGATTTGCAACAAGAGAAACAGAAGAAGCAAAAATGACGTTCAGTTCCAGCATCTGCACATCTGCTAAATTCTGGGCGTGGCAAGCATCTTTTCTGCTGCTGCTTACCAACAATGGTGCATCACAGTCGATCATCAAGAACTTGCCGGGCTTTTCCGGTGACCTCCCCTTCAAGCTTGAAACAGGGTATGTGAGCGTTGGCAAATTTGATGAACTGCAAATGTTCTACTACTTCATTGAGTCAGAGAGGAGTCCGGAAAACGATCCTCTGCTTCTTTGGATAACAGGAGGCCCTCGATGTTCTTCTTTTTATGGCCTCGTTTATGAAATTGGTCCAATATCTTTCCAATTTGGAGACTTGAACAAGGACCCATTAACACTTGTTACGAATCCATACGCATGGACCAAGCTAGCAAACATAATATTTTTAGATGCCCCTGCTGGTACTGGATTTTCATACTCAACAACTCTGGAAGGGTATATCAGTAGTGATACCCTGCATGCCACAAGAGCTTACGAGTTTCTCAAAAGGTGGCTTGTGACTCATCCCCAGTTTCTTGCAAATCCTCTCTACATTTCTGGAGATTCCTTCTCAGGAAAAATTGTTCCCATCATTGTTCAGCATATAACCGATGATATTGAAGCAGGAACCGAGCCACCTTTGAATCTCAAAGGATACATAATTGGCAATCCAGCTACAAACATTAAGGGGGATTTTAACTCGAGAATTGAGTATGCTCATCGTATGGCGCTTATATCAGATAGAATATACGAGTCAACTACAAGGAATTGCAAAGGCGAATACGTAGATGTAGATCCAAACAATCAACTATGCCTCAACAGTCTTCAAGCTTTCCAGGAGTGCACTGGAAGACTTGATTCCGAACACATATTAGCACCTTTGTGCCCCAGGGCAAACGACTATGACGAATTAACAGTGTTAGAAAAAAACTGGAATTGGAAGGCGGGTATCTCACTCCCTGTTGAGGATACTTTGAAAGATTTCCCCTCTTCTCTGCAGTTGTGTCGGGAAGATAGGATCCGCTACTCTGTTCTTTGGGCAAATGATATAAATGTCCGTAAAGCTCTCAACATTCGAGAGGTATATGGAACAAAAGGTGAATGGGCTAAATGCAATAGAACAACACCTTATACATTTGATATCCCAAGTAGTCTTGAATATCATCGAAACCTCAGCAAAAAGTCCCTTCGTGCTTTGGTCTACAGTGGTGATCATGATATGGCCATACCATATATAAGTACACTGGCGTGGATAGAATCCTTGAACTTGACACTTGAAGATGATTGGAAACCATGGTTTTCTGATGATCAAGTTGCCGGATACACAATTTACTATTCGAATAAAGAGTATAATTTGATATATGCCACCATAAAGGGAGGAGGGCATACAGCTCCAGAGTACAATCCTAAGGAGTGTTTTGATATGTTCAATAGGTGGCTAGGGCATTCTCCTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

509

Amino Acids

58.0

Weight (kDa)

5.41

Isoelectric Point (pI)

42.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1269
AccIII TCCGGA 1 cut(s) 301
AciI CCGC 2 cut(s) 1013, 1090
AclWI GGATC 4 cut(s) 305, 857, 1081, 1094
AcoI YGGCCR 1 cut(s) 1290
AcsI RAATTY 3 cut(s) 20, 116, 251
AfaI GTAC 3 cut(s) 493, 1309, 1469
AfiI CCNNNNNNNGG 1 cut(s) 1033
AjnI CCWGG 2 cut(s) 903, 956
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
AleI CACNNNNGTG 2 cut(s) 949, 1315
AloI GAACNNNNNNTCC 2 cut(s) 636, 668
AluBI AGCT 8 cut(s) 29, 223, 457, 560, 743, 899, 1133, 1460
AluI AGCT 8 cut(s) 29, 223, 457, 560, 743, 899, 1133, 1460
Alw21I GWGCWC 1 cut(s) 914
Alw26I GTCTC 1 cut(s) 396
Alw44I GTGCAC 1 cut(s) 910
AlwI GGATC 4 cut(s) 305, 857, 1081, 1094
AlwNI CAGNNNCTG 1 cut(s) 102
Ama87I CYCGRG 1 cut(s) 769
Aor13HI TCCGGA 1 cut(s) 301
AoxI GGCC 3 cut(s) 337, 361, 1290
ApaLI GTGCAC 1 cut(s) 910
ApeKI GCWGC 2 cut(s) 145, 148
ApoI RAATTY 3 cut(s) 20, 116, 251
Asp700I GAANNNNTTC 1 cut(s) 1049
AspLEI GCGC 1 cut(s) 799
AspS9I GGNCC 4 cut(s) 338, 380, 415, 450
AsuC2I CCSGG 1 cut(s) 195
AsuHPI GGTGA 3 cut(s) 218, 1178, 1289
AsuII TTCGAA 1 cut(s) 1406
AsuNHI GCTAGC 1 cut(s) 457
AvaI CYCGRG 1 cut(s) 769
AvaII GGWCC 3 cut(s) 380, 415, 450
AxyI CCTNAGG 1 cut(s) 1476
BaeGI GKGCMC 2 cut(s) 914, 956
BalI TGGCCA 1 cut(s) 1292
BamHI GGATCC 1 cut(s) 1086
BbsI GAAGAC 2 cut(s) 884, 925
Bbv12I GWGCWC 1 cut(s) 914
BbvCI CCTCAGC 1 cut(s) 1241
BbvI GCAGC 2 cut(s) 132, 135
BccI CCATC 1 cut(s) 665
BcgI CGANNNNNNTGC 4 cut(s) 156, 190, 1055, 1089
BciT130I CCWGG 2 cut(s) 905, 958
BciVI GTATCC 3 cut(s) 716, 1030, 1382
BclI TGATCA 2 cut(s) 1279, 1375
BcnI CCSGG 1 cut(s) 195
BcoDI GTCTC 1 cut(s) 396
BfaI CTAG 2 cut(s) 458, 1508
BfmI CTRYAG 2 cut(s) 1064, 1270
BfoI RGCGCY 1 cut(s) 800
BfuI GTATCC 3 cut(s) 716, 1030, 1382
BisI GCNGC 2 cut(s) 146, 149
BlsI GCNGC 2 cut(s) 147, 150
Bme1390I CCNGG 3 cut(s) 195, 905, 958
Bme18I GGWCC 3 cut(s) 380, 415, 450
BmeT110I CYCGRG 1 cut(s) 769
BmgT120I GGNCC 4 cut(s) 338, 380, 415, 450
BmiI GGNNCC 3 cut(s) 417, 697, 1088
BmrFI CCNGG 3 cut(s) 195, 905, 958
BmrI ACTGGG 1 cut(s) 592
BmsI GCATC 4 cut(s) 108, 143, 176, 469
BmtI GCTAGC 1 cut(s) 461
BmuI ACTGGG 1 cut(s) 592
BpiI GAAGAC 2 cut(s) 884, 925
BpmI CTGGAG 2 cut(s) 648, 1446
Bpu10I CCTNAGC 1 cut(s) 1241
Bpu14I TTCGAA 1 cut(s) 1406
BpuMI CCSGG 1 cut(s) 195
BsaAI YACGTR 1 cut(s) 853
BsaBI GATNNNNATC 1 cut(s) 861
BsaJI CCNNGG 3 cut(s) 956, 957, 1361
BsaWI WCCGGW 2 cut(s) 203, 301
Bsc4I CCNNNNNNNGG 1 cut(s) 1033
Bse1I ACTGG 6 cut(s) 47, 499, 598, 919, 1004, 1317
Bse21I CCTNAGG 1 cut(s) 1476
Bse8I GATNNNNATC 1 cut(s) 861
BseAI TCCGGA 1 cut(s) 301
BseBI CCWGG 2 cut(s) 905, 958
BseDI CCNNGG 3 cut(s) 956, 957, 1361
BseGI GGATG 1 cut(s) 592
BseJI GATNNNNATC 1 cut(s) 861
BseLI CCNNNNNNNGG 1 cut(s) 1033
BseMII CTCAG 2 cut(s) 654, 1255
BseNI ACTGG 6 cut(s) 47, 499, 598, 919, 1004, 1317
BseRI GAGGAG 2 cut(s) 310, 1461
BseSI GKGCMC 2 cut(s) 914, 956
BseXI GCAGC 2 cut(s) 132, 135
BsgI GTGCAG 1 cut(s) 88
BshFI GGCC 3 cut(s) 339, 363, 1292
BsiHKAI GWGCWC 1 cut(s) 914
BsiHKCI CYCGRG 1 cut(s) 769
BsiSI CCGG 4 cut(s) 194, 204, 302, 1386
BslFI GGGAC 1 cut(s) 1237
BslI CCNNNNNNNGG 1 cut(s) 1033
BsmAI GTCTC 1 cut(s) 396
BsmFI GGGAC 1 cut(s) 1237
BsmI GAATGC 1 cut(s) 1513
BsnI GGCC 3 cut(s) 339, 363, 1292
BsoBI CYCGRG 1 cut(s) 769
Bsp119I TTCGAA 1 cut(s) 1406
Bsp1286I GDGCHC 2 cut(s) 914, 956
Bsp13I TCCGGA 1 cut(s) 301
Bsp143I GATC 6 cut(s) 177, 310, 862, 1086, 1279, 1375
Bsp19I CCATGG 1 cut(s) 1361
BspACI CCGC 2 cut(s) 1013, 1090
BspANI GGCC 3 cut(s) 339, 363, 1292
BspCNI CTCAG 2 cut(s) 653, 1254
BspEI TCCGGA 1 cut(s) 301
BspHI TCATGA 1 cut(s) 1282
BspLI GGNNCC 3 cut(s) 417, 697, 1088
BspMAI CTGCAG 1 cut(s) 1068
BspOI GCTAGC 1 cut(s) 461
BspPI GGATC 4 cut(s) 305, 857, 1081, 1094
BspT104I TTCGAA 1 cut(s) 1406
BsrI ACTGG 6 cut(s) 47, 499, 598, 919, 1004, 1317
BssECI CCNNGG 3 cut(s) 956, 957, 1361
BssMI GATC 6 cut(s) 177, 310, 862, 1086, 1279, 1375
BssT1I CCWWGG 1 cut(s) 1361
Bst2UI CCWGG 2 cut(s) 905, 958
Bst4CI ACNGT 4 cut(s) 174, 890, 985, 1274
Bst6I CTCTTC 1 cut(s) 1063
BstBAI YACGTR 1 cut(s) 853
BstBI TTCGAA 1 cut(s) 1406
BstC8I GCNNGC 3 cut(s) 132, 459, 549
BstDEI CTNAG 3 cut(s) 640, 1241, 1476
BstDSI CCRYGG 1 cut(s) 1361
BstEII GGTNACC 1 cut(s) 206
BstF5I GGATG 1 cut(s) 592
BstH2I RGCGCY 1 cut(s) 800
BstHHI GCGC 1 cut(s) 799
BstKTI GATC 6 cut(s) 180, 313, 865, 1089, 1282, 1378
BstMAI GTCTC 1 cut(s) 396
BstMBI GATC 6 cut(s) 177, 310, 862, 1086, 1279, 1375
BstMWI GCNNNNNNNGC 2 cut(s) 131, 557
BstNI CCWGG 2 cut(s) 905, 958
BstNSI RCATGY 1 cut(s) 551
BstPI GGTNACC 1 cut(s) 206
BstSCI CCNGG 3 cut(s) 193, 903, 956
BstSFI CTRYAG 2 cut(s) 1064, 1270
BstSLI GKGCMC 2 cut(s) 914, 956
BstSNI TACGTA 1 cut(s) 853
BstV1I GCAGC 2 cut(s) 132, 135
BstV2I GAAGAC 2 cut(s) 884, 925
BstX2I RGATCY 2 cut(s) 862, 1086
BstXI CCANNNNNNTGG 1 cut(s) 447
BstYI RGATCY 2 cut(s) 862, 1086
Bsu36I CCTNAGG 1 cut(s) 1476
BsuI GTATCC 3 cut(s) 716, 1030, 1382
BsuRI GGCC 3 cut(s) 339, 363, 1292
BtgI CCRYGG 1 cut(s) 1361
BtsCI GGATG 1 cut(s) 592
BtsIMutI CAGTG 4 cut(s) 912, 990, 1279, 1310
Cac8I GCNNGC 3 cut(s) 132, 459, 549
CaiI CAGNNNCTG 1 cut(s) 102
CciI TCATGA 1 cut(s) 1282
CfoI GCGC 1 cut(s) 799
Cfr13I GGNCC 4 cut(s) 338, 380, 415, 450
Csp6I GTAC 3 cut(s) 492, 1308, 1468
CviAII CATG 4 cut(s) 447, 548, 1283, 1362
CviQI GTAC 3 cut(s) 492, 1308, 1468
DdeI CTNAG 3 cut(s) 640, 1241, 1476
DpnI GATC 6 cut(s) 179, 312, 864, 1088, 1281, 1377
DpnII GATC 6 cut(s) 177, 310, 862, 1086, 1279, 1375
EaeI YGGCCR 1 cut(s) 1290
Eam1104I CTCTTC 1 cut(s) 1063
EarI CTCTTC 1 cut(s) 1063
Eco105I TACGTA 1 cut(s) 853
Eco130I CCWWGG 1 cut(s) 1361
Eco32I GATATC 1 cut(s) 1210
Eco47I GGWCC 3 cut(s) 380, 415, 450
Eco81I CCTNAGG 1 cut(s) 1476
Eco88I CYCGRG 1 cut(s) 769
Eco91I GGTNACC 1 cut(s) 206
EcoO109I RGGNCCY 2 cut(s) 338, 415
EcoO65I GGTNACC 1 cut(s) 206
EcoRII CCWGG 2 cut(s) 903, 956
EcoRV GATATC 1 cut(s) 1210
EcoT14I CCWWGG 1 cut(s) 1361
ErhI CCWWGG 1 cut(s) 1361
FaeI CATG 4 cut(s) 450, 551, 1286, 1365
FaqI GGGAC 1 cut(s) 1237
FatI CATG 4 cut(s) 446, 547, 1282, 1361
FauI CCCGC 1 cut(s) 1006
FbaI TGATCA 2 cut(s) 1279, 1375
FblI GTMKAC 1 cut(s) 1269
Fnu4HI GCNGC 2 cut(s) 146, 149
FokI GGATG 1 cut(s) 579
Fsp4HI GCNGC 2 cut(s) 146, 149
FspBI CTAG 2 cut(s) 458, 1508
GlaI GCGC 1 cut(s) 798
GluI GCNGC 2 cut(s) 146, 149
GsuI CTGGAG 2 cut(s) 648, 1446
HaeII RGCGCY 1 cut(s) 800
HaeIII GGCC 3 cut(s) 339, 363, 1292
HapII CCGG 4 cut(s) 194, 204, 302, 1386
HhaI GCGC 1 cut(s) 799
Hin1II CATG 4 cut(s) 450, 551, 1286, 1365
Hin6I GCGC 1 cut(s) 797
HinP1I GCGC 1 cut(s) 797
HincII GTYRAC 1 cut(s) 825
HindII GTYRAC 1 cut(s) 825
HindIII AAGCTT 3 cut(s) 27, 221, 897
HpaII CCGG 4 cut(s) 194, 204, 302, 1386
HphI GGTGA 3 cut(s) 218, 1178, 1289
Hpy166II GTNNAC 4 cut(s) 825, 912, 1270, 1310
Hpy188I TCNGA 4 cut(s) 292, 808, 931, 1372
Hpy8I GTNNAC 4 cut(s) 825, 912, 1270, 1310
HpyAV CCTTC 5 cut(s) 226, 515, 646, 1003, 1265
HpyCH4III ACNGT 4 cut(s) 174, 890, 985, 1274
HpyCH4IV ACGT 2 cut(s) 86, 852
HpyF10VI GCNNNNNNNGC 2 cut(s) 131, 557
HpyF3I CTNAG 3 cut(s) 640, 1241, 1476
HpySE526I ACGT 2 cut(s) 86, 852
Hsp92II CATG 4 cut(s) 450, 551, 1286, 1365
HspAI GCGC 1 cut(s) 797
Kpn2I TCCGGA 1 cut(s) 301
Ksp22I TGATCA 2 cut(s) 1279, 1375
Kzo9I GATC 6 cut(s) 177, 310, 862, 1086, 1279, 1375
LmnI GCTCC 1 cut(s) 1465
Lsp1109I GCAGC 2 cut(s) 132, 135
LweI GCATC 4 cut(s) 108, 143, 176, 469
MaeI CTAG 2 cut(s) 458, 1508
MaeII ACGT 2 cut(s) 86, 852
MaeIII GTNAC 3 cut(s) 206, 430, 586
MalI GATC 6 cut(s) 179, 312, 864, 1088, 1281, 1377
MboI GATC 6 cut(s) 177, 310, 862, 1086, 1279, 1375
MboII GAAGA 7 cut(s) 83, 342, 884, 930, 1050, 1091, 1358
MflI RGATCY 2 cut(s) 862, 1086
MhlI GDGCHC 2 cut(s) 914, 956
MlsI TGGCCA 1 cut(s) 1292
MluNI TGGCCA 1 cut(s) 1292
MlyI GAGTC 5 cut(s) 24, 296, 307, 583, 830
Mox20I TGGCCA 1 cut(s) 1292
MroI TCCGGA 1 cut(s) 301
MroXI GAANNNNTTC 1 cut(s) 1049
MscI TGGCCA 1 cut(s) 1292
MseI TTAA 5 cut(s) 422, 753, 765, 980, 1525
MslI CAYNNNNRTG 3 cut(s) 445, 949, 1315
Msp20I TGGCCA 1 cut(s) 1292
MspI CCGG 4 cut(s) 194, 204, 302, 1386
MspR9I CCNGG 3 cut(s) 195, 905, 958
Mva1269I GAATGC 1 cut(s) 1513
MvaI CCWGG 2 cut(s) 905, 958
MwoI GCNNNNNNNGC 2 cut(s) 131, 557
NciI CCSGG 1 cut(s) 195
NcoI CCATGG 1 cut(s) 1361
NdeII GATC 6 cut(s) 177, 310, 862, 1086, 1279, 1375
NheI GCTAGC 1 cut(s) 457
NlaIII CATG 4 cut(s) 450, 551, 1286, 1365
NlaIV GGNNCC 3 cut(s) 417, 697, 1088
NmuCI GTSAC 2 cut(s) 206, 586
NspI RCATGY 1 cut(s) 551
NspV TTCGAA 1 cut(s) 1406
OliI CACNNNNGTG 2 cut(s) 949, 1315
PaeI GCATGC 1 cut(s) 551
PaeR7I CTCGAG 1 cut(s) 769
PagI TCATGA 1 cut(s) 1282
PasI CCCWGGG 1 cut(s) 957
PcsI WCGNNNNNNNCGW 1 cut(s) 972
PctI GAATGC 1 cut(s) 1513
PdmI GAANNNNTTC 1 cut(s) 1049
PfeI GAWTC 5 cut(s) 436, 632, 712, 926, 1325
PfoI TCCNGGA 1 cut(s) 903
PkrI GCNGC 2 cut(s) 147, 150
PleI GAGTC 5 cut(s) 23, 295, 306, 583, 829
PpsI GAGTC 5 cut(s) 23, 295, 306, 583, 829
Ppu21I YACGTR 1 cut(s) 853
PpuMI RGGWCCY 1 cut(s) 415
Psp5II RGGWCCY 1 cut(s) 415
Psp6I CCWGG 2 cut(s) 903, 956
PspEI GGTNACC 1 cut(s) 206
PspGI CCWGG 2 cut(s) 903, 956
PspN4I GGNNCC 3 cut(s) 417, 697, 1088
PspPI GGNCC 4 cut(s) 338, 380, 415, 450
PspPPI RGGWCCY 1 cut(s) 415
PstI CTGCAG 1 cut(s) 1068
PstNI CAGNNNCTG 1 cut(s) 102
PsuI RGATCY 2 cut(s) 862, 1086
RsaI GTAC 3 cut(s) 493, 1309, 1469
RsaNI GTAC 3 cut(s) 492, 1308, 1468
RseI CAYNNNNRTG 3 cut(s) 445, 949, 1315
SaqAI TTAA 5 cut(s) 422, 753, 765, 980, 1525
SatI GCNGC 2 cut(s) 146, 149
Sau3AI GATC 6 cut(s) 177, 310, 862, 1086, 1279, 1375
Sau96I GGNCC 4 cut(s) 338, 380, 415, 450
SchI GAGTC 5 cut(s) 24, 296, 307, 583, 830
ScrFI CCNGG 3 cut(s) 195, 905, 958
SduI GDGCHC 2 cut(s) 914, 956
SfaNI GCATC 4 cut(s) 108, 143, 176, 469
SfcI CTRYAG 2 cut(s) 1064, 1270
Sfr274I CTCGAG 1 cut(s) 769
SfuI TTCGAA 1 cut(s) 1406
SinI GGWCC 3 cut(s) 380, 415, 450
SlaI CTCGAG 1 cut(s) 769
SmiMI CAYNNNNRTG 3 cut(s) 445, 949, 1315
SmlI CTYRAG 1 cut(s) 769
SmoI CTYRAG 1 cut(s) 769
SnaBI TACGTA 1 cut(s) 853
SphI GCATGC 1 cut(s) 551
SsiI CCGC 2 cut(s) 1013, 1090
SspI AATATT 1 cut(s) 471
SspMI CTAG 2 cut(s) 458, 1508
StyD4I CCNGG 3 cut(s) 193, 903, 956
StyI CCWWGG 1 cut(s) 1361
TaaI ACNGT 4 cut(s) 174, 890, 985, 1274
TaiI ACGT 2 cut(s) 89, 855
TaqI TCGA 6 cut(s) 176, 343, 770, 1144, 1234, 1406
TatI WGTACW 2 cut(s) 1307, 1467
TfiI GAWTC 5 cut(s) 436, 632, 712, 926, 1325
Tru1I TTAA 5 cut(s) 422, 753, 765, 980, 1525
Tru9I TTAA 5 cut(s) 422, 753, 765, 980, 1525
TscAI CASTG 4 cut(s) 919, 990, 1279, 1317
TseFI GTSAC 2 cut(s) 206, 586
TseI GCWGC 2 cut(s) 145, 148
Tsp45I GTSAC 2 cut(s) 206, 586
TspDTI ATGAA 5 cut(s) 26, 271, 273, 387, 492
TspGWI ACGGA 1 cut(s) 1115
TspRI CASTG 4 cut(s) 919, 990, 1279, 1317
VneI GTGCAC 1 cut(s) 910
VpaK11BI GGWCC 3 cut(s) 380, 415, 450
XapI RAATTY 3 cut(s) 20, 116, 251
XceI RCATGY 1 cut(s) 551
XcmI CCANNNNNNNNNTGG 1 cut(s) 911
XhoI CTCGAG 1 cut(s) 769
XmiI GTMKAC 1 cut(s) 1269
XmnI GAANNNNTTC 1 cut(s) 1049
XspI CTAG 2 cut(s) 458, 1508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.