Rmu_sc0006954.1_g000007

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006954.1
Physical Location & Seq
Forward (+)
40150 .. 46870
6721 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006954.1_g000007.1.cds

Sequence Viewer

Length: 1719 bp
atgcgatccaacatgatcatcatttacgttagattctggctgtggcatgcttttattctactgctgcttacttccaactttgctcttgcacagtcgatcatcaagaacttaccagccttccagggtgacctccctttcaagcttgaaactgggtatgtgggcgtgggagattcagaagaggtgcaactgttctactactttgttgagtcagaaaggagtccagaaaatgatcctctgctgatttggttgacaggaggtcctcgatgctcttcgttttatggcctcatctacgaaattggtccattatctttcaaacttacaaatttgactacagatcccttaacacttgttctgaatccaaactcgtggaacaaggtagcaaacatcatattcttagatgctcctgctggtactggttactcctactccaccacttcccacgggttaatctctagtgacaccttacattcaacccgtatttgtgagtttctccagaagtggcttacgactcatcaaaagttccttgcaaatccactctatgttgctggtgactcttactctggcaaaatcgttcccatcattgcccagaagatagctgatggtattgaagctggaatcaagccacatttgaatctccagggatacatagttggtaatccagtttcaaatgcacaacaggacgttaattccagaattgtatatgctcatcatctgggacttatatcagatagaatatatcagtcagctaacaggaattgcaagggcgaatttgtagattttgatccaaacaatcaactgtgcctgaacagccttcaagcaatcgatgagtgcattgggagaattgataaagaacatatcttggcaccattttgccttgcatcaattaaccataaccaaaattccatactggaaatgaactgggagtctaatgatgacagtttcttggacttttcatttcctatggtacaaatgtgtagggaagataagattcggtattccgttctatggcaaaatgatataaatgttcgcaaagctcttggtattcgggagggaacaaaagggcaatggactaaatgcaataaaaccactccctatacatttgacatcgctagtaatattgcgtatcatcgcaatctcagccgaaaatcccttcgtgctataatctacagcggtgatcatgacatggctgttccatatataagtacactagcatggatagaatccatgaactttacaattgaagaggattggagaccatggttctctaatgatcaagttgcaggatacactctttactattcgaataataaggagtataatttgacctatgcgacaataaagggaggaggacatacagctccagaatacaatcccaaggaatgttttgatatgatcaaaaggcccgaaagtccagtcggcccagatgacaaagccgccgttgcaggggaaggtggtggagagctcggcggtgatgagaacctcggggacaccccacatgaaagggaagatgaggaagtcgagaatggcgagaatggggccggaggcttgaccagacggctcttcgccgtaagggctgccggtgaatttgaagtacatgaggaaagtcagagggataagagtgagcttctttgggtttggagtggtgggcgtggtggttgtggtggtggttattggaggtctggaagtggttttggaggagattccatattgggtttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

572

Amino Acids

64.03

Weight (kDa)

5.14

Isoelectric Point (pI)

40.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 862
AciI CCGC 3 cut(s) 1170, 1434, 1467
AclWI GGATC 3 cut(s) 224, 329, 776
AcsI RAATTY 4 cut(s) 322, 767, 898, 1583
AfaI GTAC 4 cut(s) 412, 966, 1204, 1593
AfiI CCNNNNNNNGG 2 cut(s) 1005, 1443
AhdI GACNNNNNGTC 1 cut(s) 255
AjnI CCWGG 2 cut(s) 120, 636
AluBI AGCT 8 cut(s) 142, 596, 611, 746, 1034, 1358, 1462, 1624
AluI AGCT 8 cut(s) 142, 596, 611, 746, 1034, 1358, 1462, 1624
Alw21I GWGCWC 1 cut(s) 1464
Alw26I GTCTC 1 cut(s) 1246
AlwI GGATC 3 cut(s) 224, 329, 776
Ama87I CYCGRG 1 cut(s) 1481
AoxI GGCC 4 cut(s) 280, 1400, 1417, 1536
ApeKI GCWGC 2 cut(s) 64, 1574
ApoI RAATTY 4 cut(s) 322, 767, 898, 1583
ArsI GACNNNNNNTTYG 2 cut(s) 1398, 1430
AspS9I GGNCC 5 cut(s) 257, 299, 1401, 1418, 1536
AsuHPI GGTGA 5 cut(s) 137, 560, 1184, 1481, 1592
AsuII TTCGAA 1 cut(s) 1301
AvaI CYCGRG 1 cut(s) 1481
AvaII GGWCC 2 cut(s) 257, 299
BaeI ACNNNNGTAYC 2 cut(s) 956, 989
BanI GGYRCC 1 cut(s) 862
BanII GRGCYC 1 cut(s) 1464
BauI CACGAG 1 cut(s) 364
Bbv12I GWGCWC 1 cut(s) 1464
BbvI GCAGC 2 cut(s) 51, 1561
BccI CCATC 2 cut(s) 584, 593
BceAI ACGGC 3 cut(s) 1421, 1550, 1571
BciT130I CCWGG 2 cut(s) 122, 638
BciVI GTATCC 2 cut(s) 635, 1277
BclI TGATCA 4 cut(s) 15, 1174, 1270, 1392
BcoDI GTCTC 1 cut(s) 1246
BfaI CTAG 3 cut(s) 453, 1110, 1208
BfmI CTRYAG 2 cut(s) 330, 1165
BfuI GTATCC 2 cut(s) 635, 1277
BglI GCCNNNNNGGC 1 cut(s) 1571
BisI GCNGC 3 cut(s) 65, 1434, 1575
BlsI GCNGC 3 cut(s) 66, 1435, 1576
Bme1390I CCNGG 2 cut(s) 122, 638
Bme18I GGWCC 2 cut(s) 257, 299
BmeRI GACNNNNNGTC 1 cut(s) 255
BmeT110I CYCGRG 1 cut(s) 1481
BmgT120I GGNCC 5 cut(s) 257, 299, 1401, 1418, 1536
BmiI GGNNCC 2 cut(s) 864, 1537
BmrFI CCNGG 2 cut(s) 122, 638
BmrI ACTGGG 2 cut(s) 159, 928
BmsI GCATC 3 cut(s) 254, 388, 887
BmuI ACTGGG 2 cut(s) 159, 928
BpmI CTGGAG 3 cut(s) 476, 620, 1344
Bpu14I TTCGAA 1 cut(s) 1301
Bsa29I ATCGAT 1 cut(s) 822
BsaBI GATNNNNATC 1 cut(s) 780
BsaI GGTCTC 1 cut(s) 1246
BsaJI CCNNGG 6 cut(s) 121, 439, 637, 1256, 1374, 1480
BsaXI ACNNNNNCTCC 2 cut(s) 410, 440
Bsc4I CCNNNNNNNGG 2 cut(s) 1005, 1443
Bse118I RCCGGY 1 cut(s) 1577
Bse1I ACTGG 6 cut(s) 154, 418, 659, 912, 923, 1412
Bse3DI GCAATG 2 cut(s) 579, 1070
Bse8I GATNNNNATC 1 cut(s) 780
BseBI CCWGG 2 cut(s) 122, 638
BseCI ATCGAT 1 cut(s) 822
BseDI CCNNGG 6 cut(s) 121, 439, 637, 1256, 1374, 1480
BseJI GATNNNNATC 1 cut(s) 780
BseLI CCNNNNNNNGG 2 cut(s) 1005, 1443
BseMI GCAATG 2 cut(s) 579, 1070
BseMII CTCAG 1 cut(s) 1150
BseNI ACTGG 6 cut(s) 154, 418, 659, 912, 923, 1412
BseRI GAGGAG 2 cut(s) 1359, 1710
BseXI GCAGC 2 cut(s) 51, 1561
BshFI GGCC 4 cut(s) 282, 1402, 1419, 1538
BshNI GGYRCC 1 cut(s) 862
BshVI ATCGAT 1 cut(s) 822
BsiHKAI GWGCWC 1 cut(s) 1464
BsiHKCI CYCGRG 1 cut(s) 1481
BsiSI CCGG 2 cut(s) 1539, 1578
BslFI GGGAC 2 cut(s) 729, 1499
BslI CCNNNNNNNGG 2 cut(s) 1005, 1443
BsmAI GTCTC 1 cut(s) 1246
BsmFI GGGAC 2 cut(s) 729, 1499
BsnI GGCC 4 cut(s) 282, 1402, 1419, 1538
Bso31I GGTCTC 1 cut(s) 1246
BsoBI CYCGRG 1 cut(s) 1481
Bsp119I TTCGAA 1 cut(s) 1301
Bsp1286I GDGCHC 1 cut(s) 1464
Bsp143I GATC 9 cut(s) 5, 15, 96, 229, 334, 781, 1174, 1270, 1392
Bsp19I CCATGG 1 cut(s) 1256
BspACI CCGC 3 cut(s) 1170, 1434, 1467
BspANI GGCC 4 cut(s) 282, 1402, 1419, 1538
BspCNI CTCAG 1 cut(s) 1149
BspDI ATCGAT 1 cut(s) 822
BspHI TCATGA 1 cut(s) 1177
BspLI GGNNCC 2 cut(s) 864, 1537
BspPI GGATC 3 cut(s) 224, 329, 776
BspQI GCTCTTC 2 cut(s) 274, 1565
BspT104I TTCGAA 1 cut(s) 1301
BspT107I GGYRCC 1 cut(s) 862
BspTNI GGTCTC 1 cut(s) 1246
BsrDI GCAATG 2 cut(s) 579, 1070
BsrFI RCCGGY 1 cut(s) 1577
BsrI ACTGG 6 cut(s) 154, 418, 659, 912, 923, 1412
BssAI RCCGGY 1 cut(s) 1577
BssECI CCNNGG 6 cut(s) 121, 439, 637, 1256, 1374, 1480
BssMI GATC 9 cut(s) 5, 15, 96, 229, 334, 781, 1174, 1270, 1392
BssSI CACGAG 1 cut(s) 364
BssT1I CCWWGG 2 cut(s) 1256, 1374
Bst2BI CACGAG 1 cut(s) 364
Bst2UI CCWGG 2 cut(s) 122, 638
Bst4CI ACNGT 4 cut(s) 93, 189, 798, 938
Bst6I CTCTTC 4 cut(s) 171, 274, 1236, 1565
BstBI TTCGAA 1 cut(s) 1301
BstC8I GCNNGC 1 cut(s) 48
BstDEI CTNAG 2 cut(s) 394, 1136
BstDSI CCRYGG 2 cut(s) 439, 1256
BstEII GGTNACC 1 cut(s) 125
BstKTI GATC 9 cut(s) 8, 18, 99, 232, 337, 784, 1177, 1273, 1395
BstMAI GTCTC 1 cut(s) 1246
BstMBI GATC 9 cut(s) 5, 15, 96, 229, 334, 781, 1174, 1270, 1392
BstMWI GCNNNNNNNGC 4 cut(s) 807, 1137, 1439, 1571
BstNI CCWGG 2 cut(s) 122, 638
BstNSI RCATGY 1 cut(s) 50
BstPI GGTNACC 1 cut(s) 125
BstSCI CCNGG 2 cut(s) 120, 636
BstSFI CTRYAG 2 cut(s) 330, 1165
BstV1I GCAGC 2 cut(s) 51, 1561
BstX2I RGATCY 1 cut(s) 334
BstXI CCANNNNNNTGG 1 cut(s) 366
BstYI RGATCY 1 cut(s) 334
Bsu15I ATCGAT 1 cut(s) 822
BsuI GTATCC 2 cut(s) 635, 1277
BsuRI GGCC 4 cut(s) 282, 1402, 1419, 1538
BsuTUI ATCGAT 1 cut(s) 822
BtgI CCRYGG 2 cut(s) 439, 1256
BtgZI GCGATG 2 cut(s) 1090, 1112
Cac8I GCNNGC 1 cut(s) 48
CciI TCATGA 1 cut(s) 1177
Cfr10I RCCGGY 1 cut(s) 1577
Cfr13I GGNCC 5 cut(s) 257, 299, 1401, 1418, 1536
ClaI ATCGAT 1 cut(s) 822
Csp6I GTAC 4 cut(s) 411, 965, 1203, 1592
CviAII CATG 9 cut(s) 13, 47, 1178, 1183, 1212, 1225, 1257, 1496, 1595
CviQI GTAC 4 cut(s) 411, 965, 1203, 1592
DdeI CTNAG 2 cut(s) 394, 1136
DpnI GATC 9 cut(s) 7, 17, 98, 231, 336, 783, 1176, 1272, 1394
DpnII GATC 9 cut(s) 5, 15, 96, 229, 334, 781, 1174, 1270, 1392
DriI GACNNNNNGTC 1 cut(s) 255
Eam1104I CTCTTC 4 cut(s) 171, 274, 1236, 1565
Eam1105I GACNNNNNGTC 1 cut(s) 255
EarI CTCTTC 4 cut(s) 171, 274, 1236, 1565
Ecl136II GAGCTC 1 cut(s) 1462
Eco130I CCWWGG 2 cut(s) 1256, 1374
Eco24I GRGCYC 1 cut(s) 1464
Eco31I GGTCTC 1 cut(s) 1246
Eco47I GGWCC 2 cut(s) 257, 299
Eco53kI GAGCTC 1 cut(s) 1462
Eco88I CYCGRG 1 cut(s) 1481
Eco91I GGTNACC 1 cut(s) 125
EcoICRI GAGCTC 1 cut(s) 1462
EcoO109I RGGNCCY 1 cut(s) 257
EcoO65I GGTNACC 1 cut(s) 125
EcoRII CCWGG 2 cut(s) 120, 636
EcoT14I CCWWGG 2 cut(s) 1256, 1374
EcoT38I GRGCYC 1 cut(s) 1464
ErhI CCWWGG 2 cut(s) 1256, 1374
FaeI CATG 9 cut(s) 16, 50, 1181, 1186, 1215, 1228, 1260, 1499, 1598
FaqI GGGAC 2 cut(s) 729, 1499
FatI CATG 9 cut(s) 12, 46, 1177, 1182, 1211, 1224, 1256, 1495, 1594
FbaI TGATCA 4 cut(s) 15, 1174, 1270, 1392
Fnu4HI GCNGC 3 cut(s) 65, 1434, 1575
FriOI GRGCYC 1 cut(s) 1464
Fsp4HI GCNGC 3 cut(s) 65, 1434, 1575
FspBI CTAG 3 cut(s) 453, 1110, 1208
GluI GCNGC 3 cut(s) 65, 1434, 1575
GsuI CTGGAG 3 cut(s) 476, 620, 1344
HaeIII GGCC 4 cut(s) 282, 1402, 1419, 1538
HapII CCGG 2 cut(s) 1539, 1578
Hin1II CATG 9 cut(s) 16, 50, 1181, 1186, 1215, 1228, 1260, 1499, 1598
HincII GTYRAC 1 cut(s) 249
HindII GTYRAC 1 cut(s) 249
HindIII AAGCTT 1 cut(s) 140
HpaII CCGG 2 cut(s) 1539, 1578
HphI GGTGA 5 cut(s) 137, 560, 1184, 1481, 1592
Hpy166II GTNNAC 2 cut(s) 249, 1205
Hpy188I TCNGA 5 cut(s) 175, 211, 354, 727, 1608
Hpy188III TCNNGA 9 cut(s) 103, 221, 493, 690, 1046, 1178, 1361, 1519, 1680
Hpy8I GTNNAC 2 cut(s) 249, 1205
HpyAV CCTTC 4 cut(s) 127, 821, 1160, 1442
HpyCH4III ACNGT 4 cut(s) 93, 189, 798, 938
HpyCH4IV ACGT 2 cut(s) 27, 681
HpyF10VI GCNNNNNNNGC 4 cut(s) 807, 1137, 1439, 1571
HpyF3I CTNAG 2 cut(s) 394, 1136
HpySE526I ACGT 2 cut(s) 27, 681
Hsp92II CATG 9 cut(s) 16, 50, 1181, 1186, 1215, 1228, 1260, 1499, 1598
Ksp22I TGATCA 4 cut(s) 15, 1174, 1270, 1392
Kzo9I GATC 9 cut(s) 5, 15, 96, 229, 334, 781, 1174, 1270, 1392
LguI GCTCTTC 2 cut(s) 274, 1565
LmnI GCTCC 2 cut(s) 406, 1363
Lsp1109I GCAGC 2 cut(s) 51, 1561
LweI GCATC 3 cut(s) 254, 388, 887
MaeI CTAG 3 cut(s) 453, 1110, 1208
MaeII ACGT 2 cut(s) 27, 681
MaeIII GTNAC 4 cut(s) 125, 416, 455, 548
MalI GATC 9 cut(s) 7, 17, 98, 231, 336, 783, 1176, 1272, 1394
MboI GATC 9 cut(s) 5, 15, 96, 229, 334, 781, 1174, 1270, 1392
MboII GAAGA 7 cut(s) 188, 261, 601, 992, 1253, 1517, 1552
MfeI CAATTG 1 cut(s) 1236
MflI RGATCY 1 cut(s) 334
MhlI GDGCHC 1 cut(s) 1464
MlyI GAGTC 5 cut(s) 215, 226, 502, 545, 932
MmeI TCCRAC 2 cut(s) 33, 99
MseI TTAA 4 cut(s) 341, 446, 684, 885
MslI CAYNNNNRTG 1 cut(s) 1210
MspA1I CMGCKG 1 cut(s) 1170
MspI CCGG 2 cut(s) 1539, 1578
MspR9I CCNGG 2 cut(s) 122, 638
MunI CAATTG 1 cut(s) 1236
MvaI CCWGG 2 cut(s) 122, 638
MwoI GCNNNNNNNGC 4 cut(s) 807, 1137, 1439, 1571
NcoI CCATGG 1 cut(s) 1256
NdeII GATC 9 cut(s) 5, 15, 96, 229, 334, 781, 1174, 1270, 1392
NlaIII CATG 9 cut(s) 16, 50, 1181, 1186, 1215, 1228, 1260, 1499, 1598
NlaIV GGNNCC 2 cut(s) 864, 1537
NmeAIII GCCGAG 1 cut(s) 1443
NmuCI GTSAC 3 cut(s) 125, 455, 548
NspI RCATGY 1 cut(s) 50
NspV TTCGAA 1 cut(s) 1301
PaeI GCATGC 1 cut(s) 50
PagI TCATGA 1 cut(s) 1177
PciSI GCTCTTC 2 cut(s) 274, 1565
PcsI WCGNNNNNNNCGW 1 cut(s) 1524
PfeI GAWTC 8 cut(s) 33, 170, 355, 615, 631, 988, 1220, 1700
PkrI GCNGC 3 cut(s) 66, 1435, 1576
PleI GAGTC 5 cut(s) 214, 225, 502, 545, 931
PpsI GAGTC 5 cut(s) 214, 225, 502, 545, 931
PpuMI RGGWCCY 1 cut(s) 257
Psp124BI GAGCTC 1 cut(s) 1464
Psp5II RGGWCCY 1 cut(s) 257
Psp6I CCWGG 2 cut(s) 120, 636
PspEI GGTNACC 1 cut(s) 125
PspGI CCWGG 2 cut(s) 120, 636
PspN4I GGNNCC 2 cut(s) 864, 1537
PspPI GGNCC 5 cut(s) 257, 299, 1401, 1418, 1536
PspPPI RGGWCCY 1 cut(s) 257
PsuI RGATCY 1 cut(s) 334
RsaI GTAC 4 cut(s) 412, 966, 1204, 1593
RsaNI GTAC 4 cut(s) 411, 965, 1203, 1592
RseI CAYNNNNRTG 1 cut(s) 1210
SacI GAGCTC 1 cut(s) 1464
SapI GCTCTTC 2 cut(s) 274, 1565
SaqAI TTAA 4 cut(s) 341, 446, 684, 885
SatI GCNGC 3 cut(s) 65, 1434, 1575
Sau3AI GATC 9 cut(s) 5, 15, 96, 229, 334, 781, 1174, 1270, 1392
Sau96I GGNCC 5 cut(s) 257, 299, 1401, 1418, 1536
SchI GAGTC 5 cut(s) 215, 226, 502, 545, 932
ScrFI CCNGG 2 cut(s) 122, 638
SduI GDGCHC 1 cut(s) 1464
SfaNI GCATC 3 cut(s) 254, 388, 887
SfcI CTRYAG 2 cut(s) 330, 1165
SfuI TTCGAA 1 cut(s) 1301
SinI GGWCC 2 cut(s) 257, 299
SmiMI CAYNNNNRTG 1 cut(s) 1210
SphI GCATGC 1 cut(s) 50
SsiI CCGC 3 cut(s) 1170, 1434, 1467
SspI AATATT 1 cut(s) 1117
SspMI CTAG 3 cut(s) 453, 1110, 1208
SstI GAGCTC 1 cut(s) 1464
StyD4I CCNGG 2 cut(s) 120, 636
StyI CCWWGG 2 cut(s) 1256, 1374
TaaI ACNGT 4 cut(s) 93, 189, 798, 938
TaiI ACGT 2 cut(s) 30, 684
TaqI TCGA 5 cut(s) 95, 262, 822, 1301, 1518
TatI WGTACW 2 cut(s) 1202, 1591
TauI GCSGC 1 cut(s) 1436
TfiI GAWTC 8 cut(s) 33, 170, 355, 615, 631, 988, 1220, 1700
Tru1I TTAA 4 cut(s) 341, 446, 684, 885
Tru9I TTAA 4 cut(s) 341, 446, 684, 885
TseFI GTSAC 3 cut(s) 125, 455, 548
TseI GCWGC 2 cut(s) 64, 1574
Tsp45I GTSAC 3 cut(s) 125, 455, 548
TspDTI ATGAA 4 cut(s) 929, 942, 1241, 1512
TspGWI ACGGA 1 cut(s) 988
VpaK11BI GGWCC 2 cut(s) 257, 299
XapI RAATTY 4 cut(s) 322, 767, 898, 1583
XceI RCATGY 1 cut(s) 50
XspI CTAG 3 cut(s) 453, 1110, 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.