pycom05g14810

alpha/beta hydrolase fold

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0013164
Physical Location & Seq
Forward (+)
18361171 .. 18367873
6703 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g14810.13

Sequence Viewer

Length: 1191 bp
ATGGCAGCAACGCAAGCCAAAACCCCTTCTCTTTGTTATTATTCTCATCAACTTCACAACCATATTCCTACATCATCCCTATCACTTGTTGGTAATAATCTTAAATCCCACAAGAAGACCCTCAAATTCACTTGTAGATCCAACTCATTTGGCCAGGATGATTATTACATTGATGCTCCTGTTGAAGTGGGTGATGGGTTTTCCTTCAGTGGAGGAAAGTATTCTGATGGACCGAGCCCTTCGGATGAATGGTTTAAGCAAGGGAAGATAGTGAAAGCTTATGCTGCTTTTGGTTCCGGCGAGAAGGCAAAAGACCCAATTTTTGGACTCGCAATGGGTGCTGATTCTCAGGCCTCCACTGATGTTTTCAGATGGTTTTGCGTTGAATCCGGAAGTGCTGATAATCCTTCAGTTATATTGATTCACGGTTTCCCTTCTCAGGCATACTCTTACCGCAAAGTTCTTCCCATACTTTCGAAGGACTATCACGCGATCGCTTTTGATTGGCTTGGTTTTGGATTTTCAGATAAGCCTCAACCCAAATATGGATTTGACTACACTATGAATGAGTTTGTAGCATCCTTGGAGTCATTTATAAACGAAGTTAGTGTTAACAAGGTCACGCTCGTTGTCCAGGGATACTTTGCGCCGGTTGTAGTTAAATATGCTAGCAGTCATCGGGAAAAGATTGACAACATAATACTTTTAAATCCTCCGCTAACAGAGAAGCATGCCAACCTGCCATCAACCTTGTCCATTTTCAGCAACTTTTTGTTAGGTGAAATATTTTCTCAGGATCCTCTGAGGGCAAGTGATAAAGCCTTGGAAAGTTCAGGACCTTATAAAATGAAAGAGGATGATGCAATGGTCTACAGAAATCCTTACCTCACATCCGGTGCCTCCGGTTTCGCATTAAACGCAATCAGCAGGGCCATGAAGAAAGAGCTGAAGGAGTATGTAGGGGAAATGAAGACGATACTAACAAATGAAAACTGGAAAGTTCCAACGACAGTTTGTTGGGGCAAAAGAGACCGGTGGTTGAGTTATGACGGTGTTGAAGAATTCTGCAAGGATTCTAAGCATAAGCTTATTGAAATTCCCAAGGCAGGCCATCATGTGCAGGAGGATCGTGGCGAAGAACTTGGGGAGGTCCTTAAGGGGATTATCAGAAGAAGCCGGTTCGGTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1

Protein Analysis

397

Amino Acids

44.19

Weight (kDa)

7.16

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013164)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12830
fragaria_vesca FvH4_2g17500 FvH4_2g17500
malus_domestica MD10G1148300.v1.1
prunus_persica Prupe.8G187300_v2.0.a1 Prupe.8G187300_v2.0.a1 Prupe.8G187300_v2.0.a1
pyrus_communis pycom05g14810 pycom10g12830
rosa_chinensis RchiOBHm_Chr6g0282231
rosa_laevigata RLG00000012899
rosa_multiflora Rmu_sc0014549.1_g000002
rosa_roxburghii Rroxscaffold_7G00186380
rosa_rugosa Rorug06G0146500
rosa_samantha Rh6BG262900 Rh6CG261800 Rh6DG253800
rosa_wichuraiana Rw6G022460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 596, 843
Acc36I ACCTGC 1 cut(s) 747
AccB1I GGYRCC 1 cut(s) 896
AccB7I CCANNNNNTGG 1 cut(s) 323
AccI GTMKAC 1 cut(s) 870
AccII CGCG 1 cut(s) 491
AccIII TCCGGA 1 cut(s) 389
AciI CCGC 2 cut(s) 454, 716
AclWI GGATC 4 cut(s) 132, 791, 804, 1134
AcoI YGGCCR 1 cut(s) 151
AcsI RAATTY 3 cut(s) 125, 1061, 1095
AcuI CTGAAG 3 cut(s) 190, 393, 968
AfiI CCNNNNNNNGG 4 cut(s) 323, 439, 545, 1106
AflII CTTAAG 1 cut(s) 1154
AgeI ACCGGT 1 cut(s) 1032
AgsI TTSAA 4 cut(s) 185, 386, 1058, 1094
AjnI CCWGG 2 cut(s) 153, 633
AluBI AGCT 3 cut(s) 278, 946, 1087
AluI AGCT 3 cut(s) 278, 946, 1087
Alw26I GTCTC 1 cut(s) 1023
AlwI GGATC 4 cut(s) 132, 791, 804, 1134
Aor13HI TCCGGA 1 cut(s) 389
AoxI GGCC 4 cut(s) 151, 351, 930, 1108
ApeKI GCWGC 2 cut(s) 5, 284
ApoI RAATTY 3 cut(s) 125, 1061, 1095
ArsI GACNNNNNNTTYG 2 cut(s) 305, 337
AsiGI ACCGGT 1 cut(s) 1032
AsiSI GCGATCGC 1 cut(s) 495
Asp700I GAANNNNTTC 1 cut(s) 220
AspLEI GCGC 1 cut(s) 649
AspS9I GGNCC 4 cut(s) 230, 836, 930, 1150
AsuHPI GGTGA 2 cut(s) 203, 791
AsuII TTCGAA 1 cut(s) 476
AsuNHI GCTAGC 1 cut(s) 668
AvaII GGWCC 3 cut(s) 230, 836, 1150
BalI TGGCCA 1 cut(s) 153
BamHI GGATCC 1 cut(s) 796
BanI GGYRCC 1 cut(s) 896
BanII GRGCYC 1 cut(s) 239
BbsI GAAGAC 2 cut(s) 122, 977
BbvI GCAGC 2 cut(s) 17, 271
BccI CCATC 5 cut(s) 188, 221, 366, 751, 1119
BcgI CGANNNNNNTGC 2 cut(s) 1109, 1143
BciT130I CCWGG 2 cut(s) 155, 635
BciVI GTATCC 1 cut(s) 632
BcoDI GTCTC 1 cut(s) 1023
BfaI CTAG 1 cut(s) 669
BfmI CTRYAG 1 cut(s) 871
BfrI CTTAAG 1 cut(s) 1154
BfuAI ACCTGC 1 cut(s) 747
BfuI GTATCC 1 cut(s) 632
BisI GCNGC 2 cut(s) 6, 285
BlsI GCNGC 2 cut(s) 7, 286
Bme1390I CCNGG 2 cut(s) 155, 635
Bme18I GGWCC 3 cut(s) 230, 836, 1150
BmgT120I GGNCC 4 cut(s) 230, 836, 930, 1150
BmiI GGNNCC 3 cut(s) 295, 798, 898
BmrFI CCNGG 2 cut(s) 155, 635
BmsI GCATC 3 cut(s) 163, 587, 850
BmtI GCTAGC 1 cut(s) 672
BpiI GAAGAC 2 cut(s) 122, 977
Bpu14I TTCGAA 1 cut(s) 476
BsaI GGTCTC 1 cut(s) 1023
BsaJI CCNNGG 4 cut(s) 582, 634, 822, 1101
BsaWI WCCGGW 4 cut(s) 389, 893, 902, 1032
Bsc4I CCNNNNNNNGG 4 cut(s) 323, 439, 545, 1106
Bse118I RCCGGY 3 cut(s) 649, 1032, 1176
Bse1I ACTGG 1 cut(s) 998
Bse3DI GCAATG 2 cut(s) 339, 870
BseAI TCCGGA 1 cut(s) 389
BseBI CCWGG 2 cut(s) 155, 635
BseDI CCNNGG 4 cut(s) 582, 634, 822, 1101
BseGI GGATG 6 cut(s) 74, 163, 250, 578, 862, 890
BseLI CCNNNNNNNGG 4 cut(s) 323, 439, 545, 1106
BseMI GCAATG 2 cut(s) 339, 870
BseMII CTCAG 4 cut(s) 362, 452, 794, 806
BseNI ACTGG 1 cut(s) 998
BseXI GCAGC 2 cut(s) 17, 271
BsgI GTGCAG 1 cut(s) 1139
Bsh1236I CGCG 1 cut(s) 491
Bsh1285I CGRYCG 1 cut(s) 495
BshFI GGCC 4 cut(s) 153, 353, 932, 1110
BshNI GGYRCC 1 cut(s) 896
BshTI ACCGGT 1 cut(s) 1032
BsiEI CGRYCG 1 cut(s) 495
BsiSI CCGG 7 cut(s) 297, 390, 650, 894, 903, 1033, 1177
BslI CCNNNNNNNGG 4 cut(s) 323, 439, 545, 1106
BsmAI GTCTC 1 cut(s) 1023
BsnI GGCC 4 cut(s) 153, 353, 932, 1110
Bso31I GGTCTC 1 cut(s) 1023
Bsp119I TTCGAA 1 cut(s) 476
Bsp1286I GDGCHC 1 cut(s) 239
Bsp13I TCCGGA 1 cut(s) 389
Bsp143I GATC 4 cut(s) 137, 492, 796, 1126
BspACI CCGC 2 cut(s) 454, 716
BspANI GGCC 4 cut(s) 153, 353, 932, 1110
BspCNI CTCAG 4 cut(s) 361, 451, 795, 805
BspEI TCCGGA 1 cut(s) 389
BspFNI CGCG 1 cut(s) 491
BspLI GGNNCC 3 cut(s) 295, 798, 898
BspMI ACCTGC 1 cut(s) 747
BspOI GCTAGC 1 cut(s) 672
BspPI GGATC 4 cut(s) 132, 791, 804, 1134
BspT104I TTCGAA 1 cut(s) 476
BspT107I GGYRCC 1 cut(s) 896
BspTI CTTAAG 1 cut(s) 1154
BspTNI GGTCTC 1 cut(s) 1023
BsrDI GCAATG 2 cut(s) 339, 870
BsrFI RCCGGY 3 cut(s) 649, 1032, 1176
BsrI ACTGG 1 cut(s) 998
BssAI RCCGGY 3 cut(s) 649, 1032, 1176
BssECI CCNNGG 4 cut(s) 582, 634, 822, 1101
BssMI GATC 4 cut(s) 137, 492, 796, 1126
BssT1I CCWWGG 3 cut(s) 582, 822, 1101
Bst2UI CCWGG 2 cut(s) 155, 635
Bst4CI ACNGT 3 cut(s) 428, 1012, 1052
BstAFI CTTAAG 1 cut(s) 1154
BstAPI GCANNNNNTGC 1 cut(s) 338
BstBI TTCGAA 1 cut(s) 476
BstC8I GCNNGC 4 cut(s) 15, 670, 732, 1108
BstDEI CTNAG 5 cut(s) 348, 438, 792, 803, 1077
BstF5I GGATG 6 cut(s) 74, 163, 250, 578, 862, 890
BstFNI CGCG 1 cut(s) 491
BstHHI GCGC 1 cut(s) 649
BstKTI GATC 4 cut(s) 140, 495, 799, 1129
BstMAI GTCTC 1 cut(s) 1023
BstMBI GATC 4 cut(s) 137, 492, 796, 1126
BstMCI CGRYCG 1 cut(s) 495
BstMWI GCNNNNNNNGC 4 cut(s) 14, 284, 338, 917
BstNI CCWGG 2 cut(s) 155, 635
BstNSI RCATGY 1 cut(s) 734
BstSCI CCNGG 2 cut(s) 153, 633
BstSFI CTRYAG 1 cut(s) 871
BstUI CGCG 1 cut(s) 491
BstV1I GCAGC 2 cut(s) 17, 271
BstV2I GAAGAC 2 cut(s) 122, 977
BstX2I RGATCY 2 cut(s) 137, 796
BstYI RGATCY 2 cut(s) 137, 796
BsuI GTATCC 1 cut(s) 632
BsuRI GGCC 4 cut(s) 153, 353, 932, 1110
BtsCI GGATG 6 cut(s) 74, 163, 250, 578, 862, 890
BtsIMutI CAGTG 2 cut(s) 214, 357
BveI ACCTGC 1 cut(s) 747
Cac8I GCNNGC 4 cut(s) 15, 670, 732, 1108
CfoI GCGC 1 cut(s) 649
Cfr10I RCCGGY 3 cut(s) 649, 1032, 1176
Cfr13I GGNCC 4 cut(s) 230, 836, 930, 1150
CspAI ACCGGT 1 cut(s) 1032
CviAII CATG 3 cut(s) 731, 934, 1115
DdeI CTNAG 5 cut(s) 348, 438, 792, 803, 1077
DpnI GATC 4 cut(s) 139, 494, 798, 1128
DpnII GATC 4 cut(s) 137, 492, 796, 1126
DraI TTTAAA 1 cut(s) 708
EaeI YGGCCR 1 cut(s) 151
Eco130I CCWWGG 3 cut(s) 582, 822, 1101
Eco147I AGGCCT 1 cut(s) 353
Eco24I GRGCYC 1 cut(s) 239
Eco31I GGTCTC 1 cut(s) 1023
Eco47I GGWCC 3 cut(s) 230, 836, 1150
Eco57I CTGAAG 3 cut(s) 190, 393, 968
EcoO109I RGGNCCY 2 cut(s) 836, 1150
EcoRI GAATTC 1 cut(s) 1061
EcoRII CCWGG 2 cut(s) 153, 633
EcoT14I CCWWGG 3 cut(s) 582, 822, 1101
EcoT38I GRGCYC 1 cut(s) 239
ErhI CCWWGG 3 cut(s) 582, 822, 1101
FaeI CATG 3 cut(s) 734, 937, 1118
FatI CATG 3 cut(s) 730, 933, 1114
FblI GTMKAC 1 cut(s) 870
Fnu4HI GCNGC 2 cut(s) 6, 285
FokI GGATG 6 cut(s) 61, 170, 257, 565, 869, 877
FriOI GRGCYC 1 cut(s) 239
Fsp4HI GCNGC 2 cut(s) 6, 285
FspBI CTAG 1 cut(s) 669
GlaI GCGC 1 cut(s) 648
GluI GCNGC 2 cut(s) 6, 285
HaeIII GGCC 4 cut(s) 153, 353, 932, 1110
HapII CCGG 7 cut(s) 297, 390, 650, 894, 903, 1033, 1177
HhaI GCGC 1 cut(s) 649
Hin1II CATG 3 cut(s) 734, 937, 1118
Hin6I GCGC 1 cut(s) 647
HinP1I GCGC 1 cut(s) 647
HincII GTYRAC 1 cut(s) 613
HindII GTYRAC 1 cut(s) 613
HindIII AAGCTT 2 cut(s) 276, 1085
HinfI GANTC 6 cut(s) 327, 344, 386, 421, 587, 1073
HpaI GTTAAC 1 cut(s) 613
HpaII CCGG 7 cut(s) 297, 390, 650, 894, 903, 1033, 1177
HphI GGTGA 2 cut(s) 203, 791
Hpy166II GTNNAC 2 cut(s) 613, 871
Hpy188I TCNGA 6 cut(s) 226, 244, 371, 526, 804, 1169
Hpy188III TCNNGA 4 cut(s) 390, 680, 794, 834
Hpy8I GTNNAC 2 cut(s) 613, 871
HpyAV CCTTC 8 cut(s) 36, 214, 249, 298, 417, 444, 472, 943
HpyCH4III ACNGT 3 cut(s) 428, 1012, 1052
HpyCH4V TGCA 3 cut(s) 863, 1068, 1120
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 284, 338, 917
HpyF3I CTNAG 5 cut(s) 348, 438, 792, 803, 1077
Hsp92II CATG 3 cut(s) 734, 937, 1118
HspAI GCGC 1 cut(s) 647
Kpn2I TCCGGA 1 cut(s) 389
KspAI GTTAAC 1 cut(s) 613
Kzo9I GATC 4 cut(s) 137, 492, 796, 1126
LmnI GCTCC 1 cut(s) 181
Lsp1109I GCAGC 2 cut(s) 17, 271
LweI GCATC 3 cut(s) 163, 587, 850
MaeI CTAG 1 cut(s) 669
MaeIII GTNAC 1 cut(s) 619
MalI GATC 4 cut(s) 139, 494, 798, 1128
MboI GATC 4 cut(s) 137, 492, 796, 1126
MboII GAAGA 8 cut(s) 127, 277, 455, 949, 982, 1070, 1148, 1182
MflI RGATCY 2 cut(s) 137, 796
MhlI GDGCHC 1 cut(s) 239
MlsI TGGCCA 1 cut(s) 153
MluCI AATT 4 cut(s) 125, 318, 1061, 1095
MluNI TGGCCA 1 cut(s) 153
MlyI GAGTC 2 cut(s) 321, 596
MmeI TCCRAC 2 cut(s) 165, 1028
Mox20I TGGCCA 1 cut(s) 153
MroI TCCGGA 1 cut(s) 389
MroXI GAANNNNTTC 1 cut(s) 220
MscI TGGCCA 1 cut(s) 153
MseI TTAA 8 cut(s) 102, 255, 612, 660, 707, 914, 1155, 1189
Msp20I TGGCCA 1 cut(s) 153
MspCI CTTAAG 1 cut(s) 1154
MspI CCGG 7 cut(s) 297, 390, 650, 894, 903, 1033, 1177
MspR9I CCNGG 2 cut(s) 155, 635
MvaI CCWGG 2 cut(s) 155, 635
MvnI CGCG 1 cut(s) 491
MwoI GCNNNNNNNGC 4 cut(s) 14, 284, 338, 917
NdeII GATC 4 cut(s) 137, 492, 796, 1126
NheI GCTAGC 1 cut(s) 668
NlaIII CATG 3 cut(s) 734, 937, 1118
NlaIV GGNNCC 3 cut(s) 295, 798, 898
NmuCI GTSAC 1 cut(s) 619
NspI RCATGY 1 cut(s) 734
NspV TTCGAA 1 cut(s) 476
PaeI GCATGC 1 cut(s) 734
PceI AGGCCT 1 cut(s) 353
PdmI GAANNNNTTC 1 cut(s) 220
PfeI GAWTC 4 cut(s) 344, 386, 421, 1073
PflMI CCANNNNNTGG 1 cut(s) 323
PinAI ACCGGT 1 cut(s) 1032
PkrI GCNGC 2 cut(s) 7, 286
Ple19I CGATCG 1 cut(s) 495
PleI GAGTC 2 cut(s) 321, 595
PpsI GAGTC 2 cut(s) 321, 595
PpuMI RGGWCCY 2 cut(s) 836, 1150
PsiI TTATAA 2 cut(s) 596, 843
Psp5II RGGWCCY 2 cut(s) 836, 1150
Psp6I CCWGG 2 cut(s) 153, 633
PspGI CCWGG 2 cut(s) 153, 633
PspN4I GGNNCC 3 cut(s) 295, 798, 898
PspPI GGNCC 4 cut(s) 230, 836, 930, 1150
PspPPI RGGWCCY 2 cut(s) 836, 1150
PsuI RGATCY 2 cut(s) 137, 796
PvuI CGATCG 1 cut(s) 495
RgaI GCGATCGC 1 cut(s) 495
SaqAI TTAA 8 cut(s) 102, 255, 612, 660, 707, 914, 1155, 1189
SatI GCNGC 2 cut(s) 6, 285
Sau3AI GATC 4 cut(s) 137, 492, 796, 1126
Sau96I GGNCC 4 cut(s) 230, 836, 930, 1150
SchI GAGTC 2 cut(s) 321, 596
ScrFI CCNGG 2 cut(s) 155, 635
SduI GDGCHC 1 cut(s) 239
SfaAI GCGATCGC 1 cut(s) 495
SfaNI GCATC 3 cut(s) 163, 587, 850
SfcI CTRYAG 1 cut(s) 871
SfuI TTCGAA 1 cut(s) 476
SgfI GCGATCGC 1 cut(s) 495
SinI GGWCC 3 cut(s) 230, 836, 1150
SmlI CTYRAG 1 cut(s) 1154
SmoI CTYRAG 1 cut(s) 1154
SphI GCATGC 1 cut(s) 734
Sse9I AATT 4 cut(s) 125, 318, 1061, 1095
SseBI AGGCCT 1 cut(s) 353
SsiI CCGC 2 cut(s) 454, 716
SspI AATATT 1 cut(s) 786
SspMI CTAG 1 cut(s) 669
StuI AGGCCT 1 cut(s) 353
StyD4I CCNGG 2 cut(s) 153, 633
StyI CCWWGG 3 cut(s) 582, 822, 1101
TaaI ACNGT 3 cut(s) 428, 1012, 1052
TaqI TCGA 1 cut(s) 476
TaqII GACCGA 2 cut(s) 247, 1172
TasI AATT 4 cut(s) 125, 318, 1061, 1095
TfiI GAWTC 4 cut(s) 344, 386, 421, 1073
Tru1I TTAA 8 cut(s) 102, 255, 612, 660, 707, 914, 1155, 1189
Tru9I TTAA 8 cut(s) 102, 255, 612, 660, 707, 914, 1155, 1189
TscAI CASTG 2 cut(s) 214, 364
TseFI GTSAC 1 cut(s) 619
TseI GCWGC 2 cut(s) 5, 284
Tsp45I GTSAC 1 cut(s) 619
TspDTI ATGAA 6 cut(s) 261, 578, 863, 950, 983, 1002
TspRI CASTG 2 cut(s) 214, 364
Van91I CCANNNNNTGG 1 cut(s) 323
Vha464I CTTAAG 1 cut(s) 1154
VpaK11BI GGWCC 3 cut(s) 230, 836, 1150
XapI RAATTY 3 cut(s) 125, 1061, 1095
XceI RCATGY 1 cut(s) 734
XmiI GTMKAC 1 cut(s) 870
XmnI GAANNNNTTC 1 cut(s) 220
XspI CTAG 1 cut(s) 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.