Sister chromatid cohesion protein PDS5 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G47690 AT5G47690 AT5G47690 AT5G47690 |
| fragaria_vesca | FvH4_3g00310 |
| malus_domestica | MD05G1361800.v1.1 MD10G1339300.v1.1 |
| prunus_persica | Prupe.4G003600_v2.0.a1 |
| pyrus_communis | pycom05g32830 pycom10g28910 pycom10g28920 |
| rosa_chinensis | RchiOBHm_Chr5g0000481 |
| rosa_laevigata | RLG00000030871 |
| rosa_multiflora | Rmu_co8390357.1_g000001 Rmu_sc0003949.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00075690 |
| rosa_rugosa | Rorug04G0384200 |
| rosa_samantha | Rh5AG004000 Rh5BG005300 Rh5CG004300 Rh5DG004200 |
| rosa_wichuraiana | Rw5G000400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1676, 2819 |
| Acc16I | TGCGCA | 1 cut(s) | 610 |
| Acc65I | GGTACC | 1 cut(s) | 1394 |
| AccB1I | GGYRCC | 2 cut(s) | 1394, 3194 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1061, 1965 |
| AccBSI | CCGCTC | 1 cut(s) | 3104 |
| AccI | GTMKAC | 3 cut(s) | 569, 3162, 3171 |
| AccII | CGCG | 1 cut(s) | 3727 |
| AccIII | TCCGGA | 2 cut(s) | 2254, 3225 |
| AciI | CCGC | 5 cut(s) | 218, 1230, 2206, 3102, 3400 |
| AclWI | GGATC | 7 cut(s) | 1046, 1681, 3023, 3381, 3394, 4063, 4076 |
| AcoI | YGGCCR | 3 cut(s) | 2658, 2682, 3497 |
| AcuI | CTGAAG | 9 cut(s) | 408, 1002, 1998, 2502, 2778, 3141, 3867, 4008, 4098 |
| AfaI | GTAC | 9 cut(s) | 447, 1218, 1396, 1494, 1599, 2261, 2621, 3133, 3594 |
| AfeI | AGCGCT | 2 cut(s) | 2555, 2825 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 427, 579, 976, 1061, 1444, 1965, 2200, 2275, 2667 |
| AflII | CTTAAG | 4 cut(s) | 881, 1852, 2717, 2827 |
| AflIII | ACRYGT | 1 cut(s) | 349 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 82 |
| AhlI | ACTAGT | 1 cut(s) | 1321 |
| AjnI | CCWGG | 4 cut(s) | 250, 658, 1730, 3694 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 912, 944, 2663, 2695, 3456, 3475, 3488, 3507 |
| AleI | CACNNNNGTG | 1 cut(s) | 3971 |
| Alw21I | GWGCWC | 5 cut(s) | 23, 142, 620, 2480, 3624 |
| Alw26I | GTCTC | 4 cut(s) | 69, 228, 3147, 3284 |
| Alw44I | GTGCAC | 1 cut(s) | 19 |
| AlwI | GGATC | 7 cut(s) | 1046, 1681, 3023, 3381, 3394, 4063, 4076 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4205 |
| Aor13HI | TCCGGA | 2 cut(s) | 2254, 3225 |
| Aor51HI | AGCGCT | 2 cut(s) | 2555, 2825 |
| AoxI | GGCC | 4 cut(s) | 2658, 2682, 3264, 3497 |
| ApaLI | GTGCAC | 1 cut(s) | 19 |
| ApeKI | GCWGC | 2 cut(s) | 1505, 2221 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3674, 3706 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 273, 717, 1200, 2045, 2994, 3133, 3536 |
| Asp718I | GGTACC | 1 cut(s) | 1394 |
| AspLEI | GCGC | 5 cut(s) | 537, 611, 2556, 2826, 3714 |
| AspS9I | GGNCC | 5 cut(s) | 340, 626, 916, 2077, 3264 |
| AsuC2I | CCSGG | 1 cut(s) | 1403 |
| AsuHPI | GGTGA | 9 cut(s) | 790, 914, 1124, 1282, 1724, 2183, 2792, 2807, 3114 |
| AsuII | TTCGAA | 1 cut(s) | 267 |
| AvaII | GGWCC | 4 cut(s) | 340, 626, 916, 2077 |
| AxyI | CCTNAGG | 1 cut(s) | 912 |
| BaeGI | GKGCMC | 1 cut(s) | 23 |
| BalI | TGGCCA | 2 cut(s) | 2660, 3499 |
| BamHI | GGATCC | 2 cut(s) | 3386, 4068 |
| BanI | GGYRCC | 2 cut(s) | 1394, 3194 |
| BanII | GRGCYC | 1 cut(s) | 3624 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 429, 461 |
| BbsI | GAAGAC | 6 cut(s) | 778, 1480, 2015, 3360, 3471, 4086 |
| Bbv12I | GWGCWC | 5 cut(s) | 23, 142, 620, 2480, 3624 |
| BbvI | GCAGC | 2 cut(s) | 1517, 2233 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4175, 4209 |
| BciT130I | CCWGG | 4 cut(s) | 252, 660, 1732, 3696 |
| BciVI | GTATCC | 1 cut(s) | 4103 |
| BclI | TGATCA | 2 cut(s) | 193, 1003 |
| BcnI | CCSGG | 1 cut(s) | 1403 |
| BcoDI | GTCTC | 4 cut(s) | 69, 228, 3147, 3284 |
| BcuI | ACTAGT | 1 cut(s) | 1321 |
| BfaI | CTAG | 8 cut(s) | 200, 509, 1109, 1322, 1650, 2415, 2730, 3126 |
| BfmI | CTRYAG | 2 cut(s) | 465, 3381 |
| BfoI | RGCGCY | 3 cut(s) | 538, 2557, 2827 |
| BfrI | CTTAAG | 4 cut(s) | 881, 1852, 2717, 2827 |
| BfuI | GTATCC | 1 cut(s) | 4103 |
| BglII | AGATCT | 3 cut(s) | 698, 1032, 2831 |
| BisI | GCNGC | 3 cut(s) | 1506, 2207, 2222 |
| BlsI | GCNGC | 3 cut(s) | 1507, 2208, 2223 |
| BmcAI | AGTACT | 2 cut(s) | 3133, 3594 |
| Bme1390I | CCNGG | 5 cut(s) | 252, 660, 1403, 1732, 3696 |
| Bme18I | GGWCC | 4 cut(s) | 340, 626, 916, 2077 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 82 |
| BmgT120I | GGNCC | 5 cut(s) | 340, 626, 916, 2077, 3264 |
| BmiI | GGNNCC | 5 cut(s) | 1066, 1396, 3196, 3388, 4070 |
| BmrFI | CCNGG | 5 cut(s) | 252, 660, 1403, 1732, 3696 |
| BmrI | ACTGGG | 1 cut(s) | 965 |
| BmuI | ACTGGG | 1 cut(s) | 965 |
| BoxI | GACNNNNGTC | 2 cut(s) | 3276, 3633 |
| BpiI | GAAGAC | 6 cut(s) | 778, 1480, 2015, 3360, 3471, 4086 |
| BpmI | CTGGAG | 4 cut(s) | 854, 1226, 1592, 3359 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1100 |
| Bpu14I | TTCGAA | 1 cut(s) | 267 |
| BpuEI | CTTGAG | 4 cut(s) | 775, 842, 2016, 4200 |
| BpuMI | CCSGG | 1 cut(s) | 1403 |
| Bsa29I | ATCGAT | 1 cut(s) | 3018 |
| BsaBI | GATNNNNATC | 1 cut(s) | 129 |
| BsaI | GGTCTC | 1 cut(s) | 228 |
| BsaJI | CCNNGG | 8 cut(s) | 573, 659, 1731, 2533, 2844, 3057, 3274, 3694 |
| BsaWI | WCCGGW | 2 cut(s) | 2254, 3225 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1049, 1079, 1439, 1469, 2784, 2814 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 427, 579, 976, 1061, 1444, 1965, 2200, 2275, 2667 |
| Bse118I | RCCGGY | 3 cut(s) | 420, 2079, 2352 |
| Bse21I | CCTNAGG | 1 cut(s) | 912 |
| Bse3DI | GCAATG | 1 cut(s) | 1638 |
| Bse8I | GATNNNNATC | 1 cut(s) | 129 |
| BseAI | TCCGGA | 2 cut(s) | 2254, 3225 |
| BseBI | CCWGG | 4 cut(s) | 252, 660, 1732, 3696 |
| BseCI | ATCGAT | 1 cut(s) | 3018 |
| BseDI | CCNNGG | 8 cut(s) | 573, 659, 1731, 2533, 2844, 3057, 3274, 3694 |
| BseGI | GGATG | 9 cut(s) | 904, 1096, 1398, 1525, 1727, 1741, 2262, 2332, 3098 |
| BseJI | GATNNNNATC | 1 cut(s) | 129 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 427, 579, 976, 1061, 1444, 1965, 2200, 2275, 2667 |
| BseMI | GCAATG | 1 cut(s) | 1638 |
| BseRI | GAGGAG | 5 cut(s) | 1589, 2168, 3135, 3232, 4136 |
| BseSI | GKGCMC | 1 cut(s) | 23 |
| BseXI | GCAGC | 2 cut(s) | 1517, 2233 |
| BseYI | CCCAGC | 2 cut(s) | 1068, 3788 |
| BsgI | GTGCAG | 1 cut(s) | 1923 |
| Bsh1236I | CGCG | 1 cut(s) | 3727 |
| BshFI | GGCC | 4 cut(s) | 2660, 2684, 3266, 3499 |
| BshNI | GGYRCC | 2 cut(s) | 1394, 3194 |
| BshVI | ATCGAT | 1 cut(s) | 3018 |
| BsiHKAI | GWGCWC | 5 cut(s) | 23, 142, 620, 2480, 3624 |
| BsiSI | CCGG | 7 cut(s) | 421, 1402, 2080, 2255, 2353, 3226, 4293 |
| BslFI | GGGAC | 7 cut(s) | 149, 715, 1321, 2754, 3056, 3676, 4227 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 427, 579, 976, 1061, 1444, 1965, 2200, 2275, 2667 |
| BsmAI | GTCTC | 4 cut(s) | 69, 228, 3147, 3284 |
| BsmFI | GGGAC | 7 cut(s) | 149, 715, 1321, 2754, 3056, 3676, 4227 |
| BsmI | GAATGC | 5 cut(s) | 2108, 2324, 2899, 3238, 3925 |
| BsnI | GGCC | 4 cut(s) | 2660, 2684, 3266, 3499 |
| Bso31I | GGTCTC | 1 cut(s) | 228 |
| Bsp119I | TTCGAA | 1 cut(s) | 267 |
| Bsp1286I | GDGCHC | 5 cut(s) | 23, 142, 620, 2480, 3624 |
| Bsp13I | TCCGGA | 2 cut(s) | 2254, 3225 |
| Bsp1407I | TGTACA | 3 cut(s) | 1216, 1492, 2619 |
| Bsp19I | CCATGG | 2 cut(s) | 573, 3274 |
| Bsp68I | TCGCGA | 1 cut(s) | 3727 |
| BspACI | CCGC | 5 cut(s) | 218, 1230, 2206, 3102, 3400 |
| BspANI | GGCC | 4 cut(s) | 2660, 2684, 3266, 3499 |
| BspDI | ATCGAT | 1 cut(s) | 3018 |
| BspEI | TCCGGA | 2 cut(s) | 2254, 3225 |
| BspFNI | CGCG | 1 cut(s) | 3727 |
| BspHI | TCATGA | 1 cut(s) | 2986 |
| BspLI | GGNNCC | 5 cut(s) | 1066, 1396, 3196, 3388, 4070 |
| BspMAI | CTGCAG | 1 cut(s) | 3385 |
| BspPI | GGATC | 7 cut(s) | 1046, 1681, 3023, 3381, 3394, 4063, 4076 |
| BspQI | GCTCTTC | 1 cut(s) | 3318 |
| BspT104I | TTCGAA | 1 cut(s) | 267 |
| BspT107I | GGYRCC | 2 cut(s) | 1394, 3194 |
| BspTI | CTTAAG | 4 cut(s) | 881, 1852, 2717, 2827 |
| BspTNI | GGTCTC | 1 cut(s) | 228 |
| BsrBI | CCGCTC | 1 cut(s) | 3104 |
| BsrDI | GCAATG | 1 cut(s) | 1638 |
| BsrFI | RCCGGY | 3 cut(s) | 420, 2079, 2352 |
| BsrGI | TGTACA | 3 cut(s) | 1216, 1492, 2619 |
| BssAI | RCCGGY | 3 cut(s) | 420, 2079, 2352 |
| BssECI | CCNNGG | 8 cut(s) | 573, 659, 1731, 2533, 2844, 3057, 3274, 3694 |
| BssNAI | GTATAC | 1 cut(s) | 570 |
| BssT1I | CCWWGG | 4 cut(s) | 573, 2533, 2844, 3274 |
| Bst1107I | GTATAC | 1 cut(s) | 570 |
| Bst2UI | CCWGG | 4 cut(s) | 252, 660, 1732, 3696 |
| Bst6I | CTCTTC | 7 cut(s) | 296, 978, 1662, 3318, 3909, 4041, 4134 |
| BstAFI | CTTAAG | 4 cut(s) | 881, 1852, 2717, 2827 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 488, 1487, 2894 |
| BstAUI | TGTACA | 3 cut(s) | 1216, 1492, 2619 |
| BstBI | TTCGAA | 1 cut(s) | 267 |
| BstDSI | CCRYGG | 2 cut(s) | 573, 3274 |
| BstF5I | GGATG | 9 cut(s) | 904, 1096, 1398, 1525, 1727, 1741, 2262, 2332, 3098 |
| BstFNI | CGCG | 1 cut(s) | 3727 |
| BstH2I | RGCGCY | 3 cut(s) | 538, 2557, 2827 |
| BstHHI | GCGC | 5 cut(s) | 537, 611, 2556, 2826, 3714 |
| BstMAI | GTCTC | 4 cut(s) | 69, 228, 3147, 3284 |
| BstNI | CCWGG | 4 cut(s) | 252, 660, 1732, 3696 |
| BstNSI | RCATGY | 6 cut(s) | 337, 353, 486, 1190, 1499, 3563 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 3276, 3633 |
| BstSCI | CCNGG | 5 cut(s) | 250, 658, 1401, 1730, 3694 |
| BstSFI | CTRYAG | 2 cut(s) | 465, 3381 |
| BstSLI | GKGCMC | 1 cut(s) | 23 |
| BstUI | CGCG | 1 cut(s) | 3727 |
| BstV1I | GCAGC | 2 cut(s) | 1517, 2233 |
| BstV2I | GAAGAC | 6 cut(s) | 778, 1480, 2015, 3360, 3471, 4086 |
| BstX2I | RGATCY | 6 cut(s) | 698, 1032, 1686, 2831, 3386, 4068 |
| BstYI | RGATCY | 6 cut(s) | 698, 1032, 1686, 2831, 3386, 4068 |
| BstZ17I | GTATAC | 1 cut(s) | 570 |
| Bsu15I | ATCGAT | 1 cut(s) | 3018 |
| Bsu36I | CCTNAGG | 1 cut(s) | 912 |
| BsuI | GTATCC | 1 cut(s) | 4103 |
| BsuRI | GGCC | 4 cut(s) | 2660, 2684, 3266, 3499 |
| BsuTUI | ATCGAT | 1 cut(s) | 3018 |
| BtgI | CCRYGG | 2 cut(s) | 573, 3274 |
| BtsCI | GGATG | 9 cut(s) | 904, 1096, 1398, 1525, 1727, 1741, 2262, 2332, 3098 |
| BtsI | GCAGTG | 1 cut(s) | 1422 |
| BtuMI | TCGCGA | 1 cut(s) | 3727 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4205 |
| CciI | TCATGA | 1 cut(s) | 2986 |
| CfoI | GCGC | 5 cut(s) | 537, 611, 2556, 2826, 3714 |
| Cfr10I | RCCGGY | 3 cut(s) | 420, 2079, 2352 |
| Cfr13I | GGNCC | 5 cut(s) | 340, 626, 916, 2077, 3264 |
| ClaI | ATCGAT | 1 cut(s) | 3018 |
| CseI | GACGC | 2 cut(s) | 4185, 4345 |
| Csp6I | GTAC | 9 cut(s) | 446, 1217, 1395, 1493, 1598, 2260, 2620, 3132, 3593 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2121, 2156, 3430, 3465 |
| CviQI | GTAC | 9 cut(s) | 446, 1217, 1395, 1493, 1598, 2260, 2620, 3132, 3593 |
| DraI | TTTAAA | 1 cut(s) | 213 |
| DriI | GACNNNNNGTC | 1 cut(s) | 82 |
| EaeI | YGGCCR | 3 cut(s) | 2658, 2682, 3497 |
| Eam1104I | CTCTTC | 7 cut(s) | 296, 978, 1662, 3318, 3909, 4041, 4134 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 82 |
| EarI | CTCTTC | 7 cut(s) | 296, 978, 1662, 3318, 3909, 4041, 4134 |
| Ecl136II | GAGCTC | 1 cut(s) | 3622 |
| Eco130I | CCWWGG | 4 cut(s) | 573, 2533, 2844, 3274 |
| Eco24I | GRGCYC | 1 cut(s) | 3624 |
| Eco31I | GGTCTC | 1 cut(s) | 228 |
| Eco32I | GATATC | 1 cut(s) | 1990 |
| Eco47I | GGWCC | 4 cut(s) | 340, 626, 916, 2077 |
| Eco47III | AGCGCT | 2 cut(s) | 2555, 2825 |
| Eco53kI | GAGCTC | 1 cut(s) | 3622 |
| Eco57I | CTGAAG | 9 cut(s) | 408, 1002, 1998, 2502, 2778, 3141, 3867, 4008, 4098 |
| Eco81I | CCTNAGG | 1 cut(s) | 912 |
| EcoICRI | GAGCTC | 1 cut(s) | 3622 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3264 |
| EcoRI | GAATTC | 1 cut(s) | 2512 |
| EcoRII | CCWGG | 4 cut(s) | 250, 658, 1730, 3694 |
| EcoRV | GATATC | 1 cut(s) | 1990 |
| EcoT14I | CCWWGG | 4 cut(s) | 573, 2533, 2844, 3274 |
| EcoT22I | ATGCAT | 1 cut(s) | 894 |
| EcoT38I | GRGCYC | 1 cut(s) | 3624 |
| ErhI | CCWWGG | 4 cut(s) | 573, 2533, 2844, 3274 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2751, 2783 |
| FaqI | GGGAC | 7 cut(s) | 149, 715, 1321, 2754, 3056, 3676, 4227 |
| FbaI | TGATCA | 2 cut(s) | 193, 1003 |
| FblI | GTMKAC | 3 cut(s) | 569, 3162, 3171 |
| Fnu4HI | GCNGC | 3 cut(s) | 1506, 2207, 2222 |
| FokI | GGATG | 9 cut(s) | 911, 1103, 1385, 1532, 1714, 1748, 2249, 2339, 3085 |
| FriOI | GRGCYC | 1 cut(s) | 3624 |
| Fsp4HI | GCNGC | 3 cut(s) | 1506, 2207, 2222 |
| FspBI | CTAG | 8 cut(s) | 200, 509, 1109, 1322, 1650, 2415, 2730, 3126 |
| FspI | TGCGCA | 1 cut(s) | 610 |
| GlaI | GCGC | 5 cut(s) | 536, 610, 2555, 2825, 3713 |
| GluI | GCNGC | 3 cut(s) | 1506, 2207, 2222 |
| GsaI | CCCAGC | 2 cut(s) | 1072, 3792 |
| GsuI | CTGGAG | 4 cut(s) | 854, 1226, 1592, 3359 |
| HaeII | RGCGCY | 3 cut(s) | 538, 2557, 2827 |
| HaeIII | GGCC | 4 cut(s) | 2660, 2684, 3266, 3499 |
| HapII | CCGG | 7 cut(s) | 421, 1402, 2080, 2255, 2353, 3226, 4293 |
| HgaI | GACGC | 2 cut(s) | 4185, 4345 |
| HhaI | GCGC | 5 cut(s) | 537, 611, 2556, 2826, 3714 |
| Hin6I | GCGC | 5 cut(s) | 535, 609, 2554, 2824, 3712 |
| HinP1I | GCGC | 5 cut(s) | 535, 609, 2554, 2824, 3712 |
| HincII | GTYRAC | 4 cut(s) | 309, 1021, 1909, 4183 |
| HindII | GTYRAC | 4 cut(s) | 309, 1021, 1909, 4183 |
| HindIII | AAGCTT | 3 cut(s) | 29, 390, 1074 |
| HpaI | GTTAAC | 2 cut(s) | 1021, 4183 |
| HpaII | CCGG | 7 cut(s) | 421, 1402, 2080, 2255, 2353, 3226, 4293 |
| HphI | GGTGA | 9 cut(s) | 790, 914, 1124, 1282, 1724, 2183, 2792, 2807, 3114 |
| HpyCH4IV | ACGT | 7 cut(s) | 1017, 2675, 3065, 3085, 3253, 3545, 3942 |
| HpySE526I | ACGT | 7 cut(s) | 1017, 2675, 3065, 3085, 3253, 3545, 3942 |
| HspAI | GCGC | 5 cut(s) | 535, 609, 2554, 2824, 3712 |
| Kpn2I | TCCGGA | 2 cut(s) | 2254, 3225 |
| KpnI | GGTACC | 1 cut(s) | 1398 |
| Ksp22I | TGATCA | 2 cut(s) | 193, 1003 |
| KspAI | GTTAAC | 2 cut(s) | 1021, 4183 |
| LguI | GCTCTTC | 1 cut(s) | 3318 |
| LmnI | GCTCC | 6 cut(s) | 145, 835, 913, 1070, 1405, 3619 |
| Lsp1109I | GCAGC | 2 cut(s) | 1517, 2233 |
| MaeI | CTAG | 8 cut(s) | 200, 509, 1109, 1322, 1650, 2415, 2730, 3126 |
| MaeII | ACGT | 7 cut(s) | 1017, 2675, 3065, 3085, 3253, 3545, 3942 |
| MbiI | CCGCTC | 1 cut(s) | 3104 |
| MfeI | CAATTG | 2 cut(s) | 708, 2357 |
| MflI | RGATCY | 6 cut(s) | 698, 1032, 1686, 2831, 3386, 4068 |
| MhlI | GDGCHC | 5 cut(s) | 23, 142, 620, 2480, 3624 |
| MlsI | TGGCCA | 2 cut(s) | 2660, 3499 |
| MluNI | TGGCCA | 2 cut(s) | 2660, 3499 |
| MlyI | GAGTC | 7 cut(s) | 737, 2645, 2684, 2735, 3209, 3890, 4207 |
| MmeI | TCCRAC | 3 cut(s) | 211, 370, 3283 |
| Mox20I | TGGCCA | 2 cut(s) | 2660, 3499 |
| Mph1103I | ATGCAT | 1 cut(s) | 894 |
| MroI | TCCGGA | 2 cut(s) | 2254, 3225 |
| MroXI | GAANNNNTTC | 7 cut(s) | 273, 717, 1200, 2045, 2994, 3133, 3536 |
| MscI | TGGCCA | 2 cut(s) | 2660, 3499 |
| MslI | CAYNNNNRTG | 3 cut(s) | 897, 2391, 3971 |
| Msp20I | TGGCCA | 2 cut(s) | 2660, 3499 |
| MspA1I | CMGCKG | 1 cut(s) | 2882 |
| MspCI | CTTAAG | 4 cut(s) | 881, 1852, 2717, 2827 |
| MspI | CCGG | 7 cut(s) | 421, 1402, 2080, 2255, 2353, 3226, 4293 |
| MspR9I | CCNGG | 5 cut(s) | 252, 660, 1403, 1732, 3696 |
| MunI | CAATTG | 2 cut(s) | 708, 2357 |
| Mva1269I | GAATGC | 5 cut(s) | 2108, 2324, 2899, 3238, 3925 |
| MvaI | CCWGG | 4 cut(s) | 252, 660, 1732, 3696 |
| MvnI | CGCG | 1 cut(s) | 3727 |
| NciI | CCSGG | 1 cut(s) | 1403 |
| NcoI | CCATGG | 2 cut(s) | 573, 3274 |
| NlaIV | GGNNCC | 5 cut(s) | 1066, 1396, 3196, 3388, 4070 |
| NmeAIII | GCCGAG | 1 cut(s) | 3764 |
| NmuCI | GTSAC | 8 cut(s) | 416, 876, 951, 1712, 2528, 3246, 3314, 3943 |
| NruI | TCGCGA | 1 cut(s) | 3727 |
| NsbI | TGCGCA | 1 cut(s) | 610 |
| NsiI | ATGCAT | 1 cut(s) | 894 |
| NspI | RCATGY | 6 cut(s) | 337, 353, 486, 1190, 1499, 3563 |
| NspV | TTCGAA | 1 cut(s) | 267 |
| OliI | CACNNNNGTG | 1 cut(s) | 3971 |
| PagI | TCATGA | 1 cut(s) | 2986 |
| PciI | ACATGT | 1 cut(s) | 349 |
| PciSI | GCTCTTC | 1 cut(s) | 3318 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3542 |
| PctI | GAATGC | 5 cut(s) | 2108, 2324, 2899, 3238, 3925 |
| PdmI | GAANNNNTTC | 7 cut(s) | 273, 717, 1200, 2045, 2994, 3133, 3536 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1061, 1965 |
| PfoI | TCCNGGA | 1 cut(s) | 1401 |
| PkrI | GCNGC | 3 cut(s) | 1507, 2208, 2223 |
| PleI | GAGTC | 7 cut(s) | 736, 2645, 2684, 2734, 3208, 3890, 4207 |
| PpsI | GAGTC | 7 cut(s) | 736, 2645, 2684, 2734, 3208, 3890, 4207 |
| PscI | ACATGT | 1 cut(s) | 349 |
| PshAI | GACNNNNGTC | 2 cut(s) | 3276, 3633 |
| PsiI | TTATAA | 2 cut(s) | 1676, 2819 |
| Psp124BI | GAGCTC | 1 cut(s) | 3624 |
| Psp6I | CCWGG | 4 cut(s) | 250, 658, 1730, 3694 |
| PspFI | CCCAGC | 2 cut(s) | 1068, 3788 |
| PspGI | CCWGG | 4 cut(s) | 250, 658, 1730, 3694 |
| PspN4I | GGNNCC | 5 cut(s) | 1066, 1396, 3196, 3388, 4070 |
| PspPI | GGNCC | 5 cut(s) | 340, 626, 916, 2077, 3264 |
| PstI | CTGCAG | 1 cut(s) | 3385 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4205 |
| PsuI | RGATCY | 6 cut(s) | 698, 1032, 1686, 2831, 3386, 4068 |
| PvuII | CAGCTG | 1 cut(s) | 2882 |
| RruI | TCGCGA | 1 cut(s) | 3727 |
| RsaI | GTAC | 9 cut(s) | 447, 1218, 1396, 1494, 1599, 2261, 2621, 3133, 3594 |
| RsaNI | GTAC | 9 cut(s) | 446, 1217, 1395, 1493, 1598, 2260, 2620, 3132, 3593 |
| RseI | CAYNNNNRTG | 3 cut(s) | 897, 2391, 3971 |
| SacI | GAGCTC | 1 cut(s) | 3624 |
| SapI | GCTCTTC | 1 cut(s) | 3318 |
| SatI | GCNGC | 3 cut(s) | 1506, 2207, 2222 |
| Sau96I | GGNCC | 5 cut(s) | 340, 626, 916, 2077, 3264 |
| SbfI | CCTGCAGG | 1 cut(s) | 3385 |
| ScaI | AGTACT | 2 cut(s) | 3133, 3594 |
| SchI | GAGTC | 7 cut(s) | 737, 2645, 2684, 2735, 3209, 3890, 4207 |
| ScrFI | CCNGG | 5 cut(s) | 252, 660, 1403, 1732, 3696 |
| SdaI | CCTGCAGG | 1 cut(s) | 3385 |
| SduI | GDGCHC | 5 cut(s) | 23, 142, 620, 2480, 3624 |
| SfcI | CTRYAG | 2 cut(s) | 465, 3381 |
| SfuI | TTCGAA | 1 cut(s) | 267 |
| SinI | GGWCC | 4 cut(s) | 340, 626, 916, 2077 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 897, 2391, 3971 |
| SmlI | CTYRAG | 8 cut(s) | 790, 821, 881, 1852, 2031, 2717, 2827, 4215 |
| SmoI | CTYRAG | 8 cut(s) | 790, 821, 881, 1852, 2031, 2717, 2827, 4215 |
| SpeI | ACTAGT | 1 cut(s) | 1321 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 3385 |
| SsiI | CCGC | 5 cut(s) | 218, 1230, 2206, 3102, 3400 |
| SspI | AATATT | 3 cut(s) | 1264, 1375, 2311 |
| SspMI | CTAG | 8 cut(s) | 200, 509, 1109, 1322, 1650, 2415, 2730, 3126 |
| SstI | GAGCTC | 1 cut(s) | 3624 |
| StyD4I | CCNGG | 5 cut(s) | 250, 658, 1401, 1730, 3694 |
| StyI | CCWWGG | 4 cut(s) | 573, 2533, 2844, 3274 |
| TaiI | ACGT | 7 cut(s) | 1020, 2678, 3068, 3088, 3256, 3548, 3945 |
| TaqI | TCGA | 9 cut(s) | 267, 541, 1471, 2128, 3018, 3462, 3540, 3854, 3894 |
| TatI | WGTACW | 7 cut(s) | 1216, 1492, 1597, 2259, 2619, 3131, 3592 |
| TauI | GCSGC | 1 cut(s) | 2209 |
| TseFI | GTSAC | 8 cut(s) | 416, 876, 951, 1712, 2528, 3246, 3314, 3943 |
| TseI | GCWGC | 2 cut(s) | 1505, 2221 |
| Tsp45I | GTSAC | 8 cut(s) | 416, 876, 951, 1712, 2528, 3246, 3314, 3943 |
| TspGWI | ACGGA | 2 cut(s) | 932, 3983 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1061, 1965 |
| Vha464I | CTTAAG | 4 cut(s) | 881, 1852, 2717, 2827 |
| VneI | GTGCAC | 1 cut(s) | 19 |
| VpaK11BI | GGWCC | 4 cut(s) | 340, 626, 916, 2077 |
| XceI | RCATGY | 6 cut(s) | 337, 353, 486, 1190, 1499, 3563 |
| XmiI | GTMKAC | 3 cut(s) | 569, 3162, 3171 |
| XmnI | GAANNNNTTC | 7 cut(s) | 273, 717, 1200, 2045, 2994, 3133, 3536 |
| XspI | CTAG | 8 cut(s) | 200, 509, 1109, 1322, 1650, 2415, 2730, 3126 |
| ZrmI | AGTACT | 2 cut(s) | 3133, 3594 |
| Zsp2I | ATGCAT | 1 cut(s) | 894 |