pycom10g28910

Sister chromatid cohesion protein PDS5 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0009376
Physical Location & Seq
Forward (+)
29368318 .. 29374395
6078 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g28910.1

Sequence Viewer

Length: 2589 bp
ATGTTGGTCCTCCAACATGTCAAGAGCTGTATGCTGTCCAATCCTTTCGGAGCTGAAGCTCCCGAAATAATTTCTGCCCTCTGTGACCGGCTATTGGACTTCGAAGAAAAAGTTCGGAAGCAAGTTGTTGCTGTAGTTTATGATGTGGCATGTCATGCCCTGAATTCAATTCCTCTAGAAACTATAAAATTGGTTGCAGAGCGCCTTCGAGATAAATCTCTACTTGTTAAAACGTATACCATGGAGAGGCTAGCTGAGATATTCAGGGTTTATTGCGCAAAGTGCTCTGATGGTCCACTCCTATCCAGTGATTTTGATTGGATTCCTGGGAAGATTCTGAGATGTTTTTATGACAAAGATTTCAGATCAGATACAATTGAAAATGTTCTCTGTGAGTCCCTGTTCCCTCCAAATTTTTCCGTCAAAGATAAAGTTAAACATTGGGTCAGAGTCTTATCAGGATTTGATAAAGTTGAGGTGAAGGCTCTTGAGAAGATTCTAGAGCAGAAACAAAGGTTACAACAAGAGATGCAGAAGTATCTGGCACTTAGGCAGATGCATCAGGATGGTGATGCTCCTGAGGTCCAAAAAAAAATTCTCTACTGTTTTCGTGTAATGTCACGGTTGTTTGCTGACCCTGTTAAGGCTGAAGAGGGTTTTCAATTTCTTGATCAACTGAAAGACGTAAACATCTGGAAGATTTTAACAAATCTTATTGATCCAAACACTGGCTCCCAGCAAGCTTGCACTTTACGGGATGATTTGCTTAGGATTCTGGGTGAAAAACACCGACTGTATGAATTTCTTAGCACTCTCTCAGTGAAGTGTTCTTATCTACTTTTCAACAAAGAGCATGTGAAGGAAATTCTTCTGGAGATTCTTGTACACAAATCTACTGCAGATATGAAATATGTGCAATCTTGCATGAATATTTTGGCAATTCTTGCACGCTTTAGTCCATTATTACTCAGTGGGACAGGAGAAGAACTAGCAAATTTGCTTAACGACGATGATGAAACAATAAAAGAAGGGGTTCTGAATATTTTAGCTAAGGCTGGTGGTACCATCCGGGAGCATCTTGCAGTGTCATCAAGTTCCATAGACCTTGTATTGGAAAGGTTGTGTTTGGAGGGCAGTCGAAGACAGGCAAAGTATGCTGTACATGCCCTTGCAGCAATAACAAAGGACGATGGACTTAAATCACTCTCTGTTTTATACAAGAGTCTTGTGGATATGCTGGAGGAGAAGACACATTTGCCTACTGTACTACAATCTTTGGGGTGTATAGCTCAGACTGCAATGCCAGTTTTTGAAACTAGAGAGAAGGAAATTGAAGAGTTTATAGTTGAAAAGATCCTAAAGTGCAATAATAAATCAGGCGACAATAAAAATGCATCTTGGGATGACAAAAGTGAGCTTTGTTTGCTAAAGATATACGGGATAAAGACATTAGTGAAAAGTTATTTGCCTGTCAAAGATGCTCATGTTCGCTCTGGCATTGATGGTCTGCTGGAAATCTTAAGAAACACACTTTCTTGTGGAGAAATATCAAAAGACAGAGAAACAAGTTCAGTTGACAAGGCGCATTTGAGGCTTGCTTCTGCAAAGGCGGTTCTTCGTCTGTCCAAGCACTGGAATCATAAGATACCTGTTGATATCTTCTACTTAACCTTGAAGACTTCGGAGATTAGTTTCCCTCAAGCTAAGAAAATTTTCCTGAACAAAGTTCATCAATACATAAAGGACCGGCTTTTAGATGGAAAATATGCTTGTGCATTCTTTTTTAACACATCTCGATCAAAGTCAGTGGAGTTTCAAGAGGAGAAACAGAATCTCGCAGACATTATTCAAATGTATCACCAAACAAAGGCACGGCATCTCTCTGTGCAGCAATCTGATGCTAATTCATTGACTGCTTATCCGGAGTACATCCTACCATACTTAGTTCATGCCCTTGCACATCATTCTTGTCCTAATATTGATGAATGCAAGGATGTGAAAGCATTTGAGCCGATATACCGGCAATTGCACTTATTTCTGTCTATGTTGGTGCATAGAGATGATGATGTCAAGTCAGAATCTAGTAGCAACGTTGAAAAGGAGGACATTTCTGCCATAATCTCTATCTTTCAAAGTATCAAGTGCTCTGAAGATATATATGATGCAACAAAGTCAAAGAATTCACATGGTATTTGTGACCTTGGGCTGTCAGTTACCAAGCTCTTATCCCCAAAGGAGAATGATTTACAAGGATTGCCTGCATCAATTCCTCTGCCTTCAATGTTGTACAAACCATATGAGAAGAAAGAAGGAGATGACTCTGTGGCCAGCGAAGGGCAAACGTGGTTGGCCGATGACAGTGTGCTGACTCACTTTGAATCTCTTAAGTTAGAGTCTAGTGAAACGGGAGTTTCAGAGATTGCTGAAGATGAGCTTCTGAAAGATGGTGAAAGAGATGGAGGTGAAGTGCCTTTGGGAAAAATTATAAAGCGCTTAAGATCGATCAAAATTCCAAGGCTAAAAAGGCGAAAAAGAACAAGGCATCATCAGCTGATGCAGAGAATGCTGAAAATAGTGTTGATATATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

863

Amino Acids

98.08

Weight (kDa)

7.11

Isoelectric Point (pI)

48.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 3 - 764 3.1e-162 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2486
Acc16I TGCGCA 1 cut(s) 277
Acc65I GGTACC 1 cut(s) 1061
AccB1I GGYRCC 1 cut(s) 1061
AccB7I CCANNNNNTGG 2 cut(s) 728, 1632
AccI GTMKAC 1 cut(s) 236
AccIII TCCGGA 1 cut(s) 1921
AciI CCGC 1 cut(s) 1610
AclI AACGTT 1 cut(s) 2091
AclWI GGATC 2 cut(s) 713, 1348
AcoI YGGCCR 2 cut(s) 2325, 2349
AcsI RAATTY 9 cut(s) 163, 412, 594, 800, 864, 994, 1710, 2179, 2508
AcuI CTGAAG 4 cut(s) 75, 669, 2169, 2445
AfaI GTAC 6 cut(s) 885, 1063, 1161, 1266, 1928, 2288
AfeI AGCGCT 1 cut(s) 2492
AfiI CCNNNNNNNGG 8 cut(s) 94, 246, 643, 728, 1111, 1632, 1867, 2334
AflII CTTAAG 3 cut(s) 1519, 2384, 2494
AflIII ACRYGT 1 cut(s) 16
AjnI CCWGG 1 cut(s) 325
AjuI GAANNNNNNNTTGG 2 cut(s) 579, 611
Alw21I GWGCWC 2 cut(s) 287, 2147
AlwI GGATC 2 cut(s) 713, 1348
Aor13HI TCCGGA 1 cut(s) 1921
Aor51HI AGCGCT 1 cut(s) 2492
AoxI GGCC 2 cut(s) 2325, 2349
ApeKI GCWGC 2 cut(s) 1172, 1888
ApoI RAATTY 9 cut(s) 163, 412, 594, 800, 864, 994, 1710, 2179, 2508
Asp700I GAANNNNTTC 5 cut(s) 111, 384, 867, 1032, 1712
Asp718I GGTACC 1 cut(s) 1061
AspLEI GCGC 4 cut(s) 204, 278, 1585, 2493
AspS9I GGNCC 4 cut(s) 7, 293, 583, 1744
AsuC2I CCSGG 1 cut(s) 1070
AsuHPI GGTGA 6 cut(s) 490, 581, 791, 1850, 2459, 2474
AsuII TTCGAA 1 cut(s) 102
AsuNHI GCTAGC 1 cut(s) 250
AvaII GGWCC 4 cut(s) 7, 293, 583, 1744
AxyI CCTNAGG 1 cut(s) 579
BalI TGGCCA 1 cut(s) 2327
BanI GGYRCC 1 cut(s) 1061
BbsI GAAGAC 3 cut(s) 1147, 1253, 1682
Bbv12I GWGCWC 2 cut(s) 287, 2147
BbvI GCAGC 2 cut(s) 1184, 1900
BccI CCATC 8 cut(s) 284, 560, 1073, 1184, 1496, 1751, 2438, 2450
BceAI ACGGC 1 cut(s) 1889
BciT130I CCWGG 1 cut(s) 327
BclI TGATCA 1 cut(s) 670
BcnI CCSGG 1 cut(s) 1070
BfaI CTAG 7 cut(s) 176, 251, 500, 989, 1317, 2082, 2397
BfmI CTRYAG 2 cut(s) 132, 897
BfoI RGCGCY 2 cut(s) 205, 2494
BfrI CTTAAG 3 cut(s) 1519, 2384, 2494
BisI GCNGC 2 cut(s) 1173, 1889
BlsI GCNGC 2 cut(s) 1174, 1890
Bme1390I CCNGG 2 cut(s) 327, 1070
Bme18I GGWCC 4 cut(s) 7, 293, 583, 1744
BmgT120I GGNCC 4 cut(s) 7, 293, 583, 1744
BmiI GGNNCC 2 cut(s) 733, 1063
BmrFI CCNGG 2 cut(s) 327, 1070
BmtI GCTAGC 1 cut(s) 254
BpiI GAAGAC 3 cut(s) 1147, 1253, 1682
BpmI CTGGAG 2 cut(s) 893, 1259
Bpu10I CCTNAGC 2 cut(s) 767, 1050
Bpu14I TTCGAA 1 cut(s) 102
BpuEI CTTGAG 2 cut(s) 509, 1683
BpuMI CCSGG 1 cut(s) 1070
Bsa29I ATCGAT 1 cut(s) 2501
BsaJI CCNNGG 4 cut(s) 240, 326, 2200, 2513
BsaWI WCCGGW 1 cut(s) 1921
BsaXI ACNNNNNCTCC 4 cut(s) 716, 746, 2451, 2481
Bsc4I CCNNNNNNNGG 8 cut(s) 94, 246, 643, 728, 1111, 1632, 1867, 2334
Bse118I RCCGGY 3 cut(s) 87, 1746, 2019
Bse1I ACTGG 4 cut(s) 306, 733, 1304, 1637
Bse21I CCTNAGG 1 cut(s) 579
Bse3DI GCAATG 1 cut(s) 1305
BseAI TCCGGA 1 cut(s) 1921
BseBI CCWGG 1 cut(s) 327
BseCI ATCGAT 1 cut(s) 2501
BseDI CCNNGG 4 cut(s) 240, 326, 2200, 2513
BseGI GGATG 6 cut(s) 571, 763, 1065, 1408, 1929, 1999
BseLI CCNNNNNNNGG 8 cut(s) 94, 246, 643, 728, 1111, 1632, 1867, 2334
BseMI GCAATG 1 cut(s) 1305
BseMII CTCAG 6 cut(s) 246, 329, 570, 831, 982, 1304
BseNI ACTGG 4 cut(s) 306, 733, 1304, 1637
BseRI GAGGAG 2 cut(s) 1256, 1835
BseXI GCAGC 2 cut(s) 1184, 1900
BseYI CCCAGC 1 cut(s) 735
BsgI GTGCAG 1 cut(s) 1907
BshFI GGCC 2 cut(s) 2327, 2351
BshNI GGYRCC 1 cut(s) 1061
BshVI ATCGAT 1 cut(s) 2501
BsiHKAI GWGCWC 2 cut(s) 287, 2147
BsiSI CCGG 5 cut(s) 88, 1069, 1747, 1922, 2020
BslFI GGGAC 2 cut(s) 382, 988
BslI CCNNNNNNNGG 8 cut(s) 94, 246, 643, 728, 1111, 1632, 1867, 2334
BsmFI GGGAC 2 cut(s) 382, 988
BsmI GAATGC 3 cut(s) 1775, 1991, 2568
BsnI GGCC 2 cut(s) 2327, 2351
Bsp119I TTCGAA 1 cut(s) 102
Bsp1286I GDGCHC 2 cut(s) 287, 2147
Bsp13I TCCGGA 1 cut(s) 1921
Bsp1407I TGTACA 3 cut(s) 883, 1159, 2286
Bsp143I GATC 7 cut(s) 365, 670, 718, 1353, 1796, 2498, 2502
Bsp19I CCATGG 1 cut(s) 240
BspACI CCGC 1 cut(s) 1610
BspANI GGCC 2 cut(s) 2327, 2351
BspCNI CTCAG 6 cut(s) 247, 330, 571, 830, 981, 1303
BspDI ATCGAT 1 cut(s) 2501
BspEI TCCGGA 1 cut(s) 1921
BspLI GGNNCC 2 cut(s) 733, 1063
BspMAI CTGCAG 1 cut(s) 901
BspOI GCTAGC 1 cut(s) 254
BspPI GGATC 2 cut(s) 713, 1348
BspT104I TTCGAA 1 cut(s) 102
BspT107I GGYRCC 1 cut(s) 1061
BspTI CTTAAG 3 cut(s) 1519, 2384, 2494
BsrDI GCAATG 1 cut(s) 1305
BsrFI RCCGGY 3 cut(s) 87, 1746, 2019
BsrGI TGTACA 3 cut(s) 883, 1159, 2286
BsrI ACTGG 4 cut(s) 306, 733, 1304, 1637
BssAI RCCGGY 3 cut(s) 87, 1746, 2019
BssECI CCNNGG 4 cut(s) 240, 326, 2200, 2513
BssMI GATC 7 cut(s) 365, 670, 718, 1353, 1796, 2498, 2502
BssNAI GTATAC 1 cut(s) 237
BssT1I CCWWGG 3 cut(s) 240, 2200, 2513
Bst1107I GTATAC 1 cut(s) 237
Bst2UI CCWGG 1 cut(s) 327
Bst4CI ACNGT 5 cut(s) 605, 624, 795, 1264, 2360
Bst6I CTCTTC 2 cut(s) 645, 1329
BstAFI CTTAAG 3 cut(s) 1519, 2384, 2494
BstAPI GCANNNNNTGC 4 cut(s) 155, 944, 1154, 2563
BstAUI TGTACA 3 cut(s) 883, 1159, 2286
BstBI TTCGAA 1 cut(s) 102
BstC8I GCNNGC 7 cut(s) 252, 741, 745, 949, 1596, 2259, 2329
BstDSI CCRYGG 1 cut(s) 240
BstF5I GGATG 6 cut(s) 571, 763, 1065, 1408, 1929, 1999
BstH2I RGCGCY 2 cut(s) 205, 2494
BstHHI GCGC 4 cut(s) 204, 278, 1585, 2493
BstKTI GATC 7 cut(s) 368, 673, 721, 1356, 1799, 2501, 2505
BstMBI GATC 7 cut(s) 365, 670, 718, 1353, 1796, 2498, 2502
BstNI CCWGG 1 cut(s) 327
BstNSI RCATGY 4 cut(s) 20, 153, 857, 1166
BstSCI CCNGG 2 cut(s) 325, 1068
BstSFI CTRYAG 2 cut(s) 132, 897
BstV1I GCAGC 2 cut(s) 1184, 1900
BstV2I GAAGAC 3 cut(s) 1147, 1253, 1682
BstX2I RGATCY 1 cut(s) 1353
BstYI RGATCY 1 cut(s) 1353
BstZ17I GTATAC 1 cut(s) 237
Bsu15I ATCGAT 1 cut(s) 2501
Bsu36I CCTNAGG 1 cut(s) 579
BsuRI GGCC 2 cut(s) 2327, 2351
BsuTUI ATCGAT 1 cut(s) 2501
BtgI CCRYGG 1 cut(s) 240
BtsCI GGATG 6 cut(s) 571, 763, 1065, 1408, 1929, 1999
BtsI GCAGTG 1 cut(s) 1089
BtsIMutI CAGTG 8 cut(s) 313, 726, 825, 976, 1089, 1630, 1812, 2365
Cac8I GCNNGC 7 cut(s) 252, 741, 745, 949, 1596, 2259, 2329
CfoI GCGC 4 cut(s) 204, 278, 1585, 2493
Cfr10I RCCGGY 3 cut(s) 87, 1746, 2019
Cfr13I GGNCC 4 cut(s) 7, 293, 583, 1744
ClaI ATCGAT 1 cut(s) 2501
Csp6I GTAC 6 cut(s) 884, 1062, 1160, 1265, 1927, 2287
CspCI CAANNNNNGTGG 2 cut(s) 1788, 1823
CviQI GTAC 6 cut(s) 884, 1062, 1160, 1265, 1927, 2287
DpnI GATC 7 cut(s) 367, 672, 720, 1355, 1798, 2500, 2504
DpnII GATC 7 cut(s) 365, 670, 718, 1353, 1796, 2498, 2502
EaeI YGGCCR 2 cut(s) 2325, 2349
Eam1104I CTCTTC 2 cut(s) 645, 1329
EarI CTCTTC 2 cut(s) 645, 1329
Eco130I CCWWGG 3 cut(s) 240, 2200, 2513
Eco32I GATATC 1 cut(s) 1657
Eco47I GGWCC 4 cut(s) 7, 293, 583, 1744
Eco47III AGCGCT 1 cut(s) 2492
Eco57I CTGAAG 4 cut(s) 75, 669, 2169, 2445
Eco81I CCTNAGG 1 cut(s) 579
EcoRI GAATTC 2 cut(s) 163, 2179
EcoRII CCWGG 1 cut(s) 325
EcoRV GATATC 1 cut(s) 1657
EcoT14I CCWWGG 3 cut(s) 240, 2200, 2513
EcoT22I ATGCAT 2 cut(s) 561, 1396
ErhI CCWWGG 3 cut(s) 240, 2200, 2513
FalI AAGNNNNNCTT 2 cut(s) 2418, 2450
FaqI GGGAC 2 cut(s) 382, 988
FauNDI CATATG 1 cut(s) 2296
FbaI TGATCA 1 cut(s) 670
FblI GTMKAC 1 cut(s) 236
Fnu4HI GCNGC 2 cut(s) 1173, 1889
FokI GGATG 6 cut(s) 578, 770, 1052, 1415, 1916, 2006
Fsp4HI GCNGC 2 cut(s) 1173, 1889
FspBI CTAG 7 cut(s) 176, 251, 500, 989, 1317, 2082, 2397
FspI TGCGCA 1 cut(s) 277
GlaI GCGC 4 cut(s) 203, 277, 1584, 2492
GluI GCNGC 2 cut(s) 1173, 1889
GsaI CCCAGC 1 cut(s) 739
GsuI CTGGAG 2 cut(s) 893, 1259
HaeII RGCGCY 2 cut(s) 205, 2494
HaeIII GGCC 2 cut(s) 2327, 2351
HapII CCGG 5 cut(s) 88, 1069, 1747, 1922, 2020
HhaI GCGC 4 cut(s) 204, 278, 1585, 2493
Hin6I GCGC 4 cut(s) 202, 276, 1583, 2491
HinP1I GCGC 4 cut(s) 202, 276, 1583, 2491
HincII GTYRAC 1 cut(s) 1576
HindII GTYRAC 1 cut(s) 1576
HindIII AAGCTT 1 cut(s) 741
HpaII CCGG 5 cut(s) 88, 1069, 1747, 1922, 2020
HphI GGTGA 6 cut(s) 490, 581, 791, 1850, 2459, 2474
Hpy166II GTNNAC 5 cut(s) 237, 296, 688, 886, 1576
Hpy8I GTNNAC 5 cut(s) 237, 296, 688, 886, 1576
Hpy99I CGWCG 1 cut(s) 1010
HpyAV CCTTC 8 cut(s) 215, 475, 853, 1022, 1318, 2286, 2303, 2327
HpyCH4III ACNGT 5 cut(s) 605, 624, 795, 1264, 2360
HpyCH4IV ACGT 4 cut(s) 233, 684, 2091, 2342
HpySE526I ACGT 4 cut(s) 233, 684, 2091, 2342
HspAI GCGC 4 cut(s) 202, 276, 1583, 2491
Kpn2I TCCGGA 1 cut(s) 1921
KpnI GGTACC 1 cut(s) 1065
Ksp22I TGATCA 1 cut(s) 670
Kzo9I GATC 7 cut(s) 365, 670, 718, 1353, 1796, 2498, 2502
LmnI GCTCC 5 cut(s) 50, 64, 580, 737, 1072
Lsp1109I GCAGC 2 cut(s) 1184, 1900
MaeI CTAG 7 cut(s) 176, 251, 500, 989, 1317, 2082, 2397
MaeII ACGT 4 cut(s) 233, 684, 2091, 2342
MaeIII GTNAC 5 cut(s) 83, 516, 618, 2195, 2212
MalI GATC 7 cut(s) 367, 672, 720, 1355, 1798, 2500, 2504
MboI GATC 7 cut(s) 365, 670, 718, 1353, 1796, 2498, 2502
MfeI CAATTG 2 cut(s) 375, 2024
MflI RGATCY 1 cut(s) 1353
MhlI GDGCHC 2 cut(s) 287, 2147
MlsI TGGCCA 1 cut(s) 2327
MluNI TGGCCA 1 cut(s) 2327
MlyI GAGTC 6 cut(s) 404, 459, 1231, 2312, 2362, 2402
MmeI TCCRAC 1 cut(s) 37
Mox20I TGGCCA 1 cut(s) 2327
Mph1103I ATGCAT 2 cut(s) 561, 1396
MroI TCCGGA 1 cut(s) 1921
MroXI GAANNNNTTC 5 cut(s) 111, 384, 867, 1032, 1712
MscI TGGCCA 1 cut(s) 2327
MslI CAYNNNNRTG 2 cut(s) 564, 2058
Msp20I TGGCCA 1 cut(s) 2327
MspA1I CMGCKG 1 cut(s) 2551
MspCI CTTAAG 3 cut(s) 1519, 2384, 2494
MspI CCGG 5 cut(s) 88, 1069, 1747, 1922, 2020
MspR9I CCNGG 2 cut(s) 327, 1070
MunI CAATTG 2 cut(s) 375, 2024
Mva1269I GAATGC 3 cut(s) 1775, 1991, 2568
MvaI CCWGG 1 cut(s) 327
NciI CCSGG 1 cut(s) 1070
NcoI CCATGG 1 cut(s) 240
NdeI CATATG 1 cut(s) 2296
NdeII GATC 7 cut(s) 365, 670, 718, 1353, 1796, 2498, 2502
NheI GCTAGC 1 cut(s) 250
NlaIV GGNNCC 2 cut(s) 733, 1063
NmuCI GTSAC 3 cut(s) 83, 618, 2195
NsbI TGCGCA 1 cut(s) 277
NsiI ATGCAT 2 cut(s) 561, 1396
NspI RCATGY 4 cut(s) 20, 153, 857, 1166
NspV TTCGAA 1 cut(s) 102
PciI ACATGT 1 cut(s) 16
PctI GAATGC 3 cut(s) 1775, 1991, 2568
PdmI GAANNNNTTC 5 cut(s) 111, 384, 867, 1032, 1712
PfeI GAWTC 9 cut(s) 322, 334, 496, 772, 877, 1636, 1831, 2078, 2378
PflMI CCANNNNNTGG 2 cut(s) 728, 1632
PfoI TCCNGGA 1 cut(s) 1068
PkrI GCNGC 2 cut(s) 1174, 1890
PleI GAGTC 6 cut(s) 403, 458, 1230, 2312, 2362, 2401
PpsI GAGTC 6 cut(s) 403, 458, 1230, 2312, 2362, 2401
PscI ACATGT 1 cut(s) 16
PsiI TTATAA 1 cut(s) 2486
Psp1406I AACGTT 1 cut(s) 2091
Psp6I CCWGG 1 cut(s) 325
PspFI CCCAGC 1 cut(s) 735
PspGI CCWGG 1 cut(s) 325
PspN4I GGNNCC 2 cut(s) 733, 1063
PspPI GGNCC 4 cut(s) 7, 293, 583, 1744
PstI CTGCAG 1 cut(s) 901
PsuI RGATCY 1 cut(s) 1353
PvuII CAGCTG 1 cut(s) 2551
RsaI GTAC 6 cut(s) 885, 1063, 1161, 1266, 1928, 2288
RsaNI GTAC 6 cut(s) 884, 1062, 1160, 1265, 1927, 2287
RseI CAYNNNNRTG 2 cut(s) 564, 2058
SatI GCNGC 2 cut(s) 1173, 1889
Sau3AI GATC 7 cut(s) 365, 670, 718, 1353, 1796, 2498, 2502
Sau96I GGNCC 4 cut(s) 7, 293, 583, 1744
SchI GAGTC 6 cut(s) 404, 459, 1231, 2312, 2362, 2402
ScrFI CCNGG 2 cut(s) 327, 1070
SduI GDGCHC 2 cut(s) 287, 2147
SfcI CTRYAG 2 cut(s) 132, 897
SfuI TTCGAA 1 cut(s) 102
SinI GGWCC 4 cut(s) 7, 293, 583, 1744
SmiMI CAYNNNNRTG 2 cut(s) 564, 2058
SmlI CTYRAG 5 cut(s) 488, 1519, 1698, 2384, 2494
SmoI CTYRAG 5 cut(s) 488, 1519, 1698, 2384, 2494
SsiI CCGC 1 cut(s) 1610
SspI AATATT 3 cut(s) 931, 1042, 1978
SspMI CTAG 7 cut(s) 176, 251, 500, 989, 1317, 2082, 2397
StyD4I CCNGG 2 cut(s) 325, 1068
StyI CCWWGG 3 cut(s) 240, 2200, 2513
TaaI ACNGT 5 cut(s) 605, 624, 795, 1264, 2360
TaiI ACGT 4 cut(s) 236, 687, 2094, 2345
TaqI TCGA 5 cut(s) 102, 208, 1138, 1795, 2501
TatI WGTACW 5 cut(s) 883, 1159, 1264, 1926, 2286
TfiI GAWTC 9 cut(s) 322, 334, 496, 772, 877, 1636, 1831, 2078, 2378
TscAI CASTG 8 cut(s) 313, 733, 825, 976, 1089, 1637, 1812, 2365
TseFI GTSAC 3 cut(s) 83, 618, 2195
TseI GCWGC 2 cut(s) 1172, 1888
Tsp45I GTSAC 3 cut(s) 83, 618, 2195
TspDTI ATGAA 8 cut(s) 813, 920, 941, 1029, 1718, 1896, 1937, 1998
TspGWI ACGGA 1 cut(s) 409
TspRI CASTG 8 cut(s) 313, 733, 825, 976, 1089, 1637, 1812, 2365
Van91I CCANNNNNTGG 2 cut(s) 728, 1632
Vha464I CTTAAG 3 cut(s) 1519, 2384, 2494
VpaK11BI GGWCC 4 cut(s) 7, 293, 583, 1744
XapI RAATTY 9 cut(s) 163, 412, 594, 800, 864, 994, 1710, 2179, 2508
XbaI TCTAGA 2 cut(s) 175, 499
XceI RCATGY 4 cut(s) 20, 153, 857, 1166
XmiI GTMKAC 1 cut(s) 236
XmnI GAANNNNTTC 5 cut(s) 111, 384, 867, 1032, 1712
XspI CTAG 7 cut(s) 176, 251, 500, 989, 1317, 2082, 2397
Zsp2I ATGCAT 2 cut(s) 561, 1396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.