Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0012486

Physical Location & Seq

Genomic Coordinates Forward (+)

4019537 .. 4034956

Gene Structure 15420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGACTACTCTACAAGCTTCGCTTCTTCTCAGCCTTTCACTCTCTCCAACACCTTCTTCTAAATTCAAACGTTTTCAGCTCTCCCGCTCCTCCGCCTCTTTTACTTGGACCCCTAATCTTTATCAAGCTGCGCCTCCAAGTTGTCAAAGTTTCGGATTTGTCCATCGTACTTTATCGATTTCTTGCACATTGCACCCTGACAATGCCAGTACGAATCAAGAATCGGACTTGGCGGTGAGTTCTGAAGTTGAAGAATCGAGTTTGAATGAATTTAGTGGTGGGAATAATTCAGTATCCAATGTGGGTAAGCCGGAAACTGAGGAATTTGGCGGAGAAAGGTTGGATTTTGAGGTGGAGAGTACGTCTGGGGAAATGGGTTTGGAGAATGGGGACGGAAAGAGTGAGAAGGTGGTGGAAATGGAGGGAAAGAGTGGGAACTTGGTTGGGCAGAAGAATGGAAATGGGATGCCATTGGTGGTGTTCTTGATGGGGTTGTGGGCAACTACAAGAAGTGGGTTCTCGAAGGTGTTGGCTTCCGATTGGTTCAGTTGGTGGCCATTTTCGCAGCAGGAAAAGCGGTTGGAGCGTTTGATTGCAGAGGCTGATGCCAATCCCAAGGACGCTGTAAAGCAGAGTGCTTTGCTGGCTGAGCTCAACAAGCACAGTCCTCAGTCTGTCATCAAGCGCTTTGAACAAAGGGATCATAGTGTGGACAGTAAAGGAGTTGCTGAGTATCTTCGAGCTCTTGTGGTCACTGATGCTATTTCTGATTATCTTCCAGACGACGAATCCGGAAAGCCGTCTAGCCTTCCTTTATTGCTGCAAGAGCTGAAGCAGCGTGCATCAGGCAACATGGACGATCCCTTTCTGAGCCCTGGCATAAATGAGAAGCAGCCATTGCATGTGGTGATGGTTGAACCTAAAGTATCAAATAAATCTCGTTTTGCACAAGAGATTATATCAACTATCTTGTTCACAGTTGCGGTTGGATTAGTGTGGTTCGTGGGTGCTGCTGCTCTTCAAAAGTACATAGGGAGCTTGGGTGGGATAGGTACATCTGGTGTTGGCTCAAGTTCTTCCTATGCCCCAAAAGAGTTGAATAAAGAAGTGACTCCTGAGAAGAATGTTAAAACATTTAAAGATGTAAAAGGTTGTGATGATGCAAAGAAGGAACTTGAAGAGGTTGTGGAGTACCTGAAAAACCCAACTAAGTTTACTCGCCTTGGGGGCAAGTTACCTAAGGGAATTCTTTTGACAGGAGCACCAGGAACTGGAAAGACTTTACTTGCTAAGGCTATTGCTGGAGAAGCTGGTGTACCATTTTTCTATAGAGCAGGATCTGAATTTGAAGAAATGTTTGTTGGAGTTGGTGCTCGCCGTGTAAGGTCCTTATTCCAAGCAGCCAAAAAAAAGGCTCCTTGCATCATCTTTATTGATGAAATAGATGCTGTTGGGTCCACTAGGAAACAATGGGAAGGGCATACGAAGAAAACGCTGCATCAACTACTTGTAGAAATGGATGGTTTTGAGCAGAATGAGGGAATAATTCTGATGGCTGCAACAAACTTGCCTGATATTCTTGATCCAGCATTGACAAGGCCTGGTAGATTTGATAGGCATATTGTTGTTCCTAATCCGGATGTGCGAGGTCGTCAAGAGATATTGGAGCTCTATCTACAGGACAAACCATTGGCTGATGATATAGATGTTAAAGCTATTGCTCGTGGGACACCAGGATTCAATGGGGCAGATCTTGCAAACTTGGTAAATATTGCTGCCATTAAAGCTGCTGTTGATGGCGCTGAGAAGCTGACTGCTTCACAGTTGGAGTTTGCGAAGGACAGGATTGTTATGGGTACTGAAAGAAAAACAATGTTCATATCTGAGGATTCGAAAAAGCTCACGGCATATCATGAAAGTGGTCATGCAATTGTTGCTTTGAATACTGAGGGGGCACATCCAATTCACAAGGCAACAATTATGCCTCGTGGGTCTGCTTTAGGAATGGTCACCCAGCTCCCATCAAATGATGAGACATCAGTTAGCAAGAGGCAGTTGTTAGCCCGTCTTGATGTCTGTATGGGAGGAAGAGTGGCAGAAGAGATCGATCTTCGGTCAGGATTATATCACAACTGGAGCAAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010304 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0019866 GO:0030163 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

716

Amino Acids

77.81

Weight (kDa)

6.01

Isoelectric Point (pI)

41.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	416 - 544	5.6e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	567 - 610	2.8e-09	AAA+ lid domain
Peptidase_M41	PF01434	626 - 703	1.2e-29	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53170
fragaria_vesca	FvH4_5g23210 FvH4_5g23210 FvH4_5g23210
malus_domestica	MD06G1038500.v1.1
prunus_persica	Prupe.5G026500_v2.0.a1
pyrus_communis	pycom06g03220
rosa_chinensis	RchiOBHm_Chr7g0212141
rosa_laevigata	RLG00000002923
rosa_multiflora	Rmu_sc0002283.1_g000047 Rmu_sc0013167.1_g000005
rosa_roxburghii	Rroxscaffold_3G00247080
rosa_rugosa	Rorug07G0131400 Rorug07G0131500
rosa_samantha	Rh7AG264400 Rh7BG258300 Rh7CG280900 Rh7DG270800
rosa_wichuraiana	Rw7G022570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1271
AccBSI	CCGCTC	1 cut(s)	87
AccIII	TCCGGA	2 cut(s)	791, 1636
AciI	CCGC	6 cut(s)	85, 93, 233, 330, 577, 983
AclI	AACGTT	1 cut(s)	70
AclWI	GGATC	4 cut(s)	708, 854, 1345, 1577
AcoI	YGGCCR	1 cut(s)	554
AcsI	RAATTY	5 cut(s)	62, 269, 323, 1245, 1343
AcuI	CTGAAG	2 cut(s)	264, 851
AfaI	GTAC	8 cut(s)	169, 211, 361, 1028, 1054, 1193, 1317, 1858
AfeI	AGCGCT	1 cut(s)	686
AfiI	CCNNNNNNNGG	1 cut(s)	1271
AjnI	CCWGG	4 cut(s)	874, 1264, 1600, 1732
AjuI	GAANNNNNNNTTGG	4 cut(s)	40, 72, 1344, 1376
Alw21I	GWGCWC	5 cut(s)	654, 745, 1264, 1375, 1671
Alw26I	GTCTC	1 cut(s)	2027
AlwI	GGATC	4 cut(s)	708, 854, 1345, 1577
AlwNI	CAGNNNCTG	3 cut(s)	602, 1271, 1340
Aor13HI	TCCGGA	2 cut(s)	791, 1636
Aor51HI	AGCGCT	1 cut(s)	686
AoxI	GGCC	2 cut(s)	554, 1598
ApoI	RAATTY	5 cut(s)	62, 269, 323, 1245, 1343
AspLEI	GCGC	3 cut(s)	133, 687, 1802
AspS9I	GGNCC	3 cut(s)	108, 1386, 1455
AsuHPI	GGTGA	3 cut(s)	247, 919, 2002
AsuII	TTCGAA	1 cut(s)	1892
AvaII	GGWCC	3 cut(s)	108, 1386, 1455
AxyI	CCTNAGG	1 cut(s)	1239
BaeGI	GKGCMC	1 cut(s)	1957
BalI	TGGCCA	1 cut(s)	556
BanII	GRGCYC	4 cut(s)	654, 745, 875, 1671
BarI	GAAGNNNNNNTAC	2 cut(s)	1299, 1331
BauI	CACGAG	2 cut(s)	1722, 1986
Bbv12I	GWGCWC	5 cut(s)	654, 745, 1264, 1375, 1671
BccI	CCATC	7 cut(s)	171, 481, 904, 1514, 1546, 1790, 2029
BceAI	ACGGC	3 cut(s)	784, 1362, 1920
BciT130I	CCWGG	4 cut(s)	876, 1266, 1602, 1734
BciVI	GTATCC	1 cut(s)	304
BcoDI	GTCTC	1 cut(s)	2027
BfaI	CTAG	2 cut(s)	804, 1461
BfmI	CTRYAG	2 cut(s)	1327, 1676
BfoI	RGCGCY	2 cut(s)	688, 1803
BfuI	GTATCC	1 cut(s)	304
BglI	GCCNNNNNGGC	1 cut(s)	1227
BglII	AGATCT	1 cut(s)	1750
BlpI	GCTNAGC	1 cut(s)	648
Bme1390I	CCNGG	4 cut(s)	876, 1266, 1602, 1734
Bme18I	GGWCC	3 cut(s)	108, 1386, 1455
BmgT120I	GGNCC	3 cut(s)	108, 1386, 1455
BmiI	GGNNCC	3 cut(s)	110, 1416, 1456
BmrFI	CCNGG	4 cut(s)	876, 1266, 1602, 1734
BmsI	GCATC	8 cut(s)	456, 595, 748, 851, 1150, 1431, 1435, 1507
BpmI	CTGGAG	1 cut(s)	1323
Bpu10I	CCTNAGC	1 cut(s)	1290
Bpu1102I	GCTNAGC	1 cut(s)	648
Bpu14I	TTCGAA	1 cut(s)	1892
BpuEI	CTTGAG	1 cut(s)	1054
Bsa29I	ATCGAT	2 cut(s)	176, 2106
BsaBI	GATNNNNATC	1 cut(s)	609
BsaJI	CCNNGG	3 cut(s)	615, 874, 1222
BsaWI	WCCGGW	2 cut(s)	791, 1636
BsaXI	ACNNNNNCTCC	6 cut(s)	347, 377, 1027, 1057, 2076, 2106
Bsc4I	CCNNNNNNNGG	1 cut(s)	1271
Bse1I	ACTGG	3 cut(s)	207, 1276, 2138
Bse21I	CCTNAGG	1 cut(s)	1239
Bse3DI	GCAATG	2 cut(s)	188, 896
Bse8I	GATNNNNATC	1 cut(s)	609
BseAI	TCCGGA	2 cut(s)	791, 1636
BseBI	CCWGG	4 cut(s)	876, 1266, 1602, 1734
BseCI	ATCGAT	2 cut(s)	176, 2106
BseDI	CCNNGG	3 cut(s)	615, 874, 1222
BseGI	GGATG	4 cut(s)	471, 1525, 1645, 1957
BseJI	GATNNNNATC	1 cut(s)	609
BseLI	CCNNNNNNNGG	1 cut(s)	1271
BseMI	GCAATG	2 cut(s)	188, 896
BseNI	ACTGG	3 cut(s)	207, 1276, 2138
BseRI	GAGGAG	1 cut(s)	79
BseSI	GKGCMC	1 cut(s)	1957
BseYI	CCCAGC	1 cut(s)	2013
BshFI	GGCC	2 cut(s)	556, 1600
BshVI	ATCGAT	2 cut(s)	176, 2106
BsiHKAI	GWGCWC	5 cut(s)	654, 745, 1264, 1375, 1671
BsiSI	CCGG	3 cut(s)	311, 792, 1637
BslFI	GGGAC	2 cut(s)	404, 1741
BslI	CCNNNNNNNGG	1 cut(s)	1271
BsmAI	GTCTC	1 cut(s)	2027
BsmFI	GGGAC	2 cut(s)	404, 1741
BsnI	GGCC	2 cut(s)	556, 1600
Bsp119I	TTCGAA	1 cut(s)	1892
Bsp1286I	GDGCHC	7 cut(s)	654, 745, 875, 1264, 1375, 1671, 1957
Bsp13I	TCCGGA	2 cut(s)	791, 1636
Bsp143I	GATC	7 cut(s)	700, 859, 1337, 1582, 1750, 2103, 2107
Bsp1720I	GCTNAGC	1 cut(s)	648
BspACI	CCGC	6 cut(s)	85, 93, 233, 330, 577, 983
BspANI	GGCC	2 cut(s)	556, 1600
BspDI	ATCGAT	2 cut(s)	176, 2106
BspEI	TCCGGA	2 cut(s)	791, 1636
BspHI	TCATGA	1 cut(s)	1912
BspLI	GGNNCC	3 cut(s)	110, 1416, 1456
BspPI	GGATC	4 cut(s)	708, 854, 1345, 1577
BspQI	GCTCTTC	1 cut(s)	1023
BspT104I	TTCGAA	1 cut(s)	1892
BsrBI	CCGCTC	1 cut(s)	87
BsrDI	GCAATG	2 cut(s)	188, 896
BsrI	ACTGG	3 cut(s)	207, 1276, 2138
BssECI	CCNNGG	3 cut(s)	615, 874, 1222
BssMI	GATC	7 cut(s)	700, 859, 1337, 1582, 1750, 2103, 2107
BssSI	CACGAG	2 cut(s)	1722, 1986
BssT1I	CCWWGG	2 cut(s)	615, 1222
Bst2BI	CACGAG	2 cut(s)	1722, 1986
Bst2UI	CCWGG	4 cut(s)	876, 1266, 1602, 1734
Bst4CI	ACNGT	4 cut(s)	665, 716, 979, 1824
Bst6I	CTCTTC	4 cut(s)	1023, 1173, 2083, 2094
BstAPI	GCANNNNNTGC	3 cut(s)	898, 1754, 1934
BstBI	TTCGAA	1 cut(s)	1892
BstC8I	GCNNGC	4 cut(s)	645, 840, 1375, 2141
BstEII	GGTNACC	1 cut(s)	2008
BstF5I	GGATG	4 cut(s)	471, 1525, 1645, 1957
BstH2I	RGCGCY	2 cut(s)	688, 1803
BstHHI	GCGC	3 cut(s)	133, 687, 1802
BstKTI	GATC	7 cut(s)	703, 862, 1340, 1585, 1753, 2106, 2110
BstMAI	GTCTC	1 cut(s)	2027
BstMBI	GATC	7 cut(s)	700, 859, 1337, 1582, 1750, 2103, 2107
BstNI	CCWGG	4 cut(s)	876, 1266, 1602, 1734
BstNSI	RCATGY	1 cut(s)	905
BstPI	GGTNACC	1 cut(s)	2008
BstSCI	CCNGG	4 cut(s)	874, 1264, 1600, 1732
BstSFI	CTRYAG	2 cut(s)	1327, 1676
BstSLI	GKGCMC	1 cut(s)	1957
BstX2I	RGATCY	2 cut(s)	1337, 1750
BstYI	RGATCY	2 cut(s)	1337, 1750
Bsu15I	ATCGAT	2 cut(s)	176, 2106
Bsu36I	CCTNAGG	1 cut(s)	1239
BsuI	GTATCC	1 cut(s)	304
BsuRI	GGCC	2 cut(s)	556, 1600
BsuTUI	ATCGAT	2 cut(s)	176, 2106
BtsCI	GGATG	4 cut(s)	471, 1525, 1645, 1957
BtsIMutI	CAGTG	1 cut(s)	753
Cac8I	GCNNGC	4 cut(s)	645, 840, 1375, 2141
CaiI	CAGNNNCTG	3 cut(s)	602, 1271, 1340
CciI	TCATGA	1 cut(s)	1912
CfoI	GCGC	3 cut(s)	133, 687, 1802
Cfr13I	GGNCC	3 cut(s)	108, 1386, 1455
ClaI	ATCGAT	2 cut(s)	176, 2106
CseI	GACGC	1 cut(s)	629
Csp6I	GTAC	8 cut(s)	168, 210, 360, 1027, 1053, 1192, 1316, 1857
CviAII	CATG	4 cut(s)	853, 902, 1913, 1925
CviQI	GTAC	8 cut(s)	168, 210, 360, 1027, 1053, 1192, 1316, 1857
DpnI	GATC	7 cut(s)	702, 861, 1339, 1584, 1752, 2105, 2109
DpnII	GATC	7 cut(s)	700, 859, 1337, 1582, 1750, 2103, 2107
DraI	TTTAAA	1 cut(s)	1138
EaeI	YGGCCR	1 cut(s)	554
Eam1104I	CTCTTC	4 cut(s)	1023, 1173, 2083, 2094
EarI	CTCTTC	4 cut(s)	1023, 1173, 2083, 2094
EciI	GGCGGA	2 cut(s)	82, 345
Ecl136II	GAGCTC	3 cut(s)	652, 743, 1669
Eco130I	CCWWGG	2 cut(s)	615, 1222
Eco147I	AGGCCT	1 cut(s)	1600
Eco24I	GRGCYC	4 cut(s)	654, 745, 875, 1671
Eco47I	GGWCC	3 cut(s)	108, 1386, 1455
Eco47III	AGCGCT	1 cut(s)	686
Eco53kI	GAGCTC	3 cut(s)	652, 743, 1669
Eco57I	CTGAAG	2 cut(s)	264, 851
Eco81I	CCTNAGG	1 cut(s)	1239
Eco91I	GGTNACC	1 cut(s)	2008
EcoICRI	GAGCTC	3 cut(s)	652, 743, 1669
EcoO109I	RGGNCCY	1 cut(s)	1386
EcoO65I	GGTNACC	1 cut(s)	2008
EcoRI	GAATTC	1 cut(s)	1245
EcoRII	CCWGG	4 cut(s)	874, 1264, 1600, 1732
EcoT14I	CCWWGG	2 cut(s)	615, 1222
EcoT38I	GRGCYC	4 cut(s)	654, 745, 875, 1671
ErhI	CCWWGG	2 cut(s)	615, 1222
FaeI	CATG	4 cut(s)	856, 905, 1916, 1928
FalI	AAGNNNNNCTT	1 cut(s)	38
FaqI	GGGAC	2 cut(s)	404, 1741
FatI	CATG	4 cut(s)	852, 901, 1912, 1924
FauI	CCCGC	1 cut(s)	92
FokI	GGATG	4 cut(s)	478, 1532, 1652, 1944
FriOI	GRGCYC	4 cut(s)	654, 745, 875, 1671
FspBI	CTAG	2 cut(s)	804, 1461
GlaI	GCGC	3 cut(s)	132, 686, 1801
GsaI	CCCAGC	1 cut(s)	2017
GsuI	CTGGAG	1 cut(s)	1323
HaeII	RGCGCY	2 cut(s)	688, 1803
HaeIII	GGCC	2 cut(s)	556, 1600
HapII	CCGG	3 cut(s)	311, 792, 1637
HgaI	GACGC	1 cut(s)	629
HhaI	GCGC	3 cut(s)	133, 687, 1802
Hin1II	CATG	4 cut(s)	856, 905, 1916, 1928
Hin6I	GCGC	3 cut(s)	131, 685, 1800
HinP1I	GCGC	3 cut(s)	131, 685, 1800
HindIII	AAGCTT	1 cut(s)	15
HinfI	GANTC	7 cut(s)	214, 221, 254, 788, 1111, 1737, 1889
HpaII	CCGG	3 cut(s)	311, 792, 1637
HphI	GGTGA	3 cut(s)	247, 919, 2002
Hpy166II	GTNNAC	5 cut(s)	712, 975, 1215, 1316, 1458
Hpy188I	TCNGA	9 cut(s)	155, 226, 244, 538, 769, 870, 1342, 1551, 1885
Hpy8I	GTNNAC	5 cut(s)	712, 975, 1215, 1316, 1458
Hpy99I	CGWCG	1 cut(s)	788
HpyAV	CCTTC	7 cut(s)	63, 400, 517, 818, 1162, 1469, 1831
HpyCH4III	ACNGT	4 cut(s)	665, 716, 979, 1824
HpyCH4IV	ACGT	2 cut(s)	70, 362
HpySE526I	ACGT	2 cut(s)	70, 362
Hsp92II	CATG	4 cut(s)	856, 905, 1916, 1928
HspAI	GCGC	3 cut(s)	131, 685, 1800
Kpn2I	TCCGGA	2 cut(s)	791, 1636
Kzo9I	GATC	7 cut(s)	700, 859, 1337, 1582, 1750, 2103, 2107
LguI	GCTCTTC	1 cut(s)	1023
LmnI	GCTCC	8 cut(s)	92, 583, 1035, 1259, 1420, 1666, 2022, 2136
LweI	GCATC	8 cut(s)	456, 595, 748, 851, 1150, 1431, 1435, 1507
MaeI	CTAG	2 cut(s)	804, 1461
MaeII	ACGT	2 cut(s)	70, 362
MaeIII	GTNAC	4 cut(s)	751, 1108, 1233, 2008
MalI	GATC	7 cut(s)	702, 861, 1339, 1584, 1752, 2105, 2109
MbiI	CCGCTC	1 cut(s)	87
MboI	GATC	7 cut(s)	700, 859, 1337, 1582, 1750, 2103, 2107
MfeI	CAATTG	1 cut(s)	1929
MflI	RGATCY	2 cut(s)	1337, 1750
MhlI	GDGCHC	7 cut(s)	654, 745, 875, 1264, 1375, 1671, 1957
MlsI	TGGCCA	1 cut(s)	556
MluNI	TGGCCA	1 cut(s)	556
MlyI	GAGTC	1 cut(s)	1105
MmeI	TCCRAC	6 cut(s)	71, 321, 561, 967, 1342, 1806
Mox20I	TGGCCA	1 cut(s)	556
MroI	TCCGGA	2 cut(s)	791, 1636
MscI	TGGCCA	1 cut(s)	556
MseI	TTAA	4 cut(s)	1128, 1137, 1710, 1782
MslI	CAYNNNNRTG	1 cut(s)	1917
Msp20I	TGGCCA	1 cut(s)	556
MspI	CCGG	3 cut(s)	311, 792, 1637
MspR9I	CCNGG	4 cut(s)	876, 1266, 1602, 1734
MunI	CAATTG	1 cut(s)	1929
MvaI	CCWGG	4 cut(s)	876, 1266, 1602, 1734
NdeII	GATC	7 cut(s)	700, 859, 1337, 1582, 1750, 2103, 2107
NlaIII	CATG	4 cut(s)	856, 905, 1916, 1928
NlaIV	GGNNCC	3 cut(s)	110, 1416, 1456
NmuCI	GTSAC	3 cut(s)	751, 1108, 2008
NspI	RCATGY	1 cut(s)	905
NspV	TTCGAA	1 cut(s)	1892
PagI	TCATGA	1 cut(s)	1912
PceI	AGGCCT	1 cut(s)	1600
PciSI	GCTCTTC	1 cut(s)	1023
PfeI	GAWTC	6 cut(s)	214, 221, 254, 788, 1737, 1889
PflMI	CCANNNNNTGG	1 cut(s)	1271
PleI	GAGTC	1 cut(s)	1105
PpsI	GAGTC	1 cut(s)	1105
PpuMI	RGGWCCY	1 cut(s)	1386
Psp124BI	GAGCTC	3 cut(s)	654, 745, 1671
Psp1406I	AACGTT	1 cut(s)	70
Psp5II	RGGWCCY	1 cut(s)	1386
Psp6I	CCWGG	4 cut(s)	874, 1264, 1600, 1732
PspEI	GGTNACC	1 cut(s)	2008
PspFI	CCCAGC	1 cut(s)	2013
PspGI	CCWGG	4 cut(s)	874, 1264, 1600, 1732
PspN4I	GGNNCC	3 cut(s)	110, 1416, 1456
PspPI	GGNCC	3 cut(s)	108, 1386, 1455
PspPPI	RGGWCCY	1 cut(s)	1386
PstNI	CAGNNNCTG	3 cut(s)	602, 1271, 1340
PsuI	RGATCY	2 cut(s)	1337, 1750
RsaI	GTAC	8 cut(s)	169, 211, 361, 1028, 1054, 1193, 1317, 1858
RsaNI	GTAC	8 cut(s)	168, 210, 360, 1027, 1053, 1192, 1316, 1857
RseI	CAYNNNNRTG	1 cut(s)	1917
SacI	GAGCTC	3 cut(s)	654, 745, 1671
SapI	GCTCTTC	1 cut(s)	1023
SaqAI	TTAA	4 cut(s)	1128, 1137, 1710, 1782
Sau3AI	GATC	7 cut(s)	700, 859, 1337, 1582, 1750, 2103, 2107
Sau96I	GGNCC	3 cut(s)	108, 1386, 1455
SchI	GAGTC	1 cut(s)	1105
ScrFI	CCNGG	4 cut(s)	876, 1266, 1602, 1734
SduI	GDGCHC	7 cut(s)	654, 745, 875, 1264, 1375, 1671, 1957
SfaNI	GCATC	8 cut(s)	456, 595, 748, 851, 1150, 1431, 1435, 1507
SfcI	CTRYAG	2 cut(s)	1327, 1676
SfuI	TTCGAA	1 cut(s)	1892
SinI	GGWCC	3 cut(s)	108, 1386, 1455
SmiMI	CAYNNNNRTG	1 cut(s)	1917
SmlI	CTYRAG	1 cut(s)	1069
SmoI	CTYRAG	1 cut(s)	1069
SseBI	AGGCCT	1 cut(s)	1600
SsiI	CCGC	6 cut(s)	85, 93, 233, 330, 577, 983
SspI	AATATT	1 cut(s)	1771
SspMI	CTAG	2 cut(s)	804, 1461
SstI	GAGCTC	3 cut(s)	654, 745, 1671
StuI	AGGCCT	1 cut(s)	1600
StyD4I	CCNGG	4 cut(s)	874, 1264, 1600, 1732
StyI	CCWWGG	2 cut(s)	615, 1222
TaaI	ACNGT	4 cut(s)	665, 716, 979, 1824
TaiI	ACGT	2 cut(s)	73, 365
TaqI	TCGA	6 cut(s)	176, 257, 521, 739, 1892, 2106
TaqII	GACCGA	1 cut(s)	2103
TatI	WGTACW	1 cut(s)	1026
TfiI	GAWTC	6 cut(s)	214, 221, 254, 788, 1737, 1889
Tru1I	TTAA	4 cut(s)	1128, 1137, 1710, 1782
Tru9I	TTAA	4 cut(s)	1128, 1137, 1710, 1782
TscAI	CASTG	1 cut(s)	760
TseFI	GTSAC	3 cut(s)	751, 1108, 2008
Tsp45I	GTSAC	3 cut(s)	751, 1108, 2008
TspDTI	ATGAA	4 cut(s)	282, 1452, 1867, 1929
TspGWI	ACGGA	1 cut(s)	408
TspRI	CASTG	1 cut(s)	760
Van91I	CCANNNNNTGG	1 cut(s)	1271
VpaK11BI	GGWCC	3 cut(s)	108, 1386, 1455
XapI	RAATTY	5 cut(s)	62, 269, 323, 1245, 1343
XceI	RCATGY	1 cut(s)	905
XspI	CTAG	2 cut(s)	804, 1461

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.