Tobamovirus multiplication protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32400 AT1G32400 AT1G32400 |
| fragaria_vesca | FvH4_5g21300 |
| malus_domestica | MD06G1039300.v1.1 MD16G1270100.v1.1 |
| prunus_persica | Prupe.5G044200_v2.0.a1 Prupe.5G044200_v2.0.a1 Prupe.5G044200_v2.0.a1 |
| pyrus_communis | pycom06g03290 pycom16g23920 |
| rosa_chinensis | RchiOBHm_Chr7g0208641 |
| rosa_laevigata | RLG00000003206 |
| rosa_roxburghii | Rroxscaffold_3G00250360 |
| rosa_rugosa | Rorug07G0105100 |
| rosa_samantha | Rh7AG240000 Rh7CG254800 Rh7DG245900 |
| rosa_wichuraiana | Rw7G020350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 209 |
| AfaI | GTAC | 1 cut(s) | 271 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 209, 224 |
| AluBI | AGCT | 6 cut(s) | 23, 59, 145, 197, 305, 350 |
| AluI | AGCT | 6 cut(s) | 23, 59, 145, 197, 305, 350 |
| Alw21I | GWGCWC | 2 cut(s) | 147, 217 |
| Alw44I | GTGCAC | 1 cut(s) | 213 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 209 |
| ApaLI | GTGCAC | 1 cut(s) | 213 |
| ApeKI | GCWGC | 2 cut(s) | 107, 172 |
| AspS9I | GGNCC | 1 cut(s) | 30 |
| AvaII | GGWCC | 1 cut(s) | 30 |
| BaeGI | GKGCMC | 1 cut(s) | 217 |
| BanII | GRGCYC | 2 cut(s) | 147, 232 |
| BbsI | GAAGAC | 1 cut(s) | 58 |
| Bbv12I | GWGCWC | 2 cut(s) | 147, 217 |
| BbvI | GCAGC | 2 cut(s) | 119, 184 |
| BccI | CCATC | 2 cut(s) | 36, 331 |
| BclI | TGATCA | 1 cut(s) | 235 |
| BfaI | CTAG | 1 cut(s) | 95 |
| BisI | GCNGC | 2 cut(s) | 108, 173 |
| BlsI | GCNGC | 2 cut(s) | 109, 174 |
| Bme18I | GGWCC | 1 cut(s) | 30 |
| BmgT120I | GGNCC | 1 cut(s) | 30 |
| BmiI | GGNNCC | 1 cut(s) | 371 |
| BmsI | GCATC | 2 cut(s) | 250, 365 |
| BoxI | GACNNNNGTC | 1 cut(s) | 35 |
| BpiI | GAAGAC | 1 cut(s) | 58 |
| BsaJI | CCNNGG | 1 cut(s) | 155 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 48, 78 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 209, 224 |
| Bse1I | ACTGG | 2 cut(s) | 32, 214 |
| Bse3DI | GCAATG | 1 cut(s) | 147 |
| BseDI | CCNNGG | 1 cut(s) | 155 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 209, 224 |
| BseMI | GCAATG | 1 cut(s) | 147 |
| BseMII | CTCAG | 1 cut(s) | 297 |
| BseNI | ACTGG | 2 cut(s) | 32, 214 |
| BseSI | GKGCMC | 1 cut(s) | 217 |
| BseXI | GCAGC | 2 cut(s) | 119, 184 |
| BseYI | CCCAGC | 1 cut(s) | 224 |
| BsiHKAI | GWGCWC | 2 cut(s) | 147, 217 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 209, 224 |
| Bsp1286I | GDGCHC | 3 cut(s) | 147, 217, 232 |
| Bsp143I | GATC | 1 cut(s) | 235 |
| BspCNI | CTCAG | 1 cut(s) | 298 |
| BspLI | GGNNCC | 1 cut(s) | 371 |
| BsrDI | GCAATG | 1 cut(s) | 147 |
| BsrI | ACTGG | 2 cut(s) | 32, 214 |
| BssECI | CCNNGG | 1 cut(s) | 155 |
| BssMI | GATC | 1 cut(s) | 235 |
| BssT1I | CCWWGG | 1 cut(s) | 155 |
| Bst4CI | ACNGT | 1 cut(s) | 134 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 212, 221 |
| BstC8I | GCNNGC | 2 cut(s) | 90, 195 |
| BstDEI | CTNAG | 1 cut(s) | 306 |
| BstKTI | GATC | 1 cut(s) | 238 |
| BstMBI | GATC | 1 cut(s) | 235 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 56, 203, 212, 221 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 35 |
| BstSLI | GKGCMC | 1 cut(s) | 217 |
| BstV1I | GCAGC | 2 cut(s) | 119, 184 |
| BstV2I | GAAGAC | 1 cut(s) | 58 |
| BtsIMutI | CAGTG | 2 cut(s) | 25, 139 |
| Cac8I | GCNNGC | 2 cut(s) | 90, 195 |
| CaiI | CAGNNNCTG | 1 cut(s) | 209 |
| Cfr13I | GGNCC | 1 cut(s) | 30 |
| Csp6I | GTAC | 1 cut(s) | 270 |
| CviAII | CATG | 2 cut(s) | 277, 385 |
| CviQI | GTAC | 1 cut(s) | 270 |
| DdeI | CTNAG | 1 cut(s) | 306 |
| DpnI | GATC | 1 cut(s) | 237 |
| DpnII | GATC | 1 cut(s) | 235 |
| Ecl136II | GAGCTC | 1 cut(s) | 145 |
| Eco130I | CCWWGG | 1 cut(s) | 155 |
| Eco24I | GRGCYC | 2 cut(s) | 147, 232 |
| Eco47I | GGWCC | 1 cut(s) | 30 |
| Eco53kI | GAGCTC | 1 cut(s) | 145 |
| EcoICRI | GAGCTC | 1 cut(s) | 145 |
| EcoT14I | CCWWGG | 1 cut(s) | 155 |
| EcoT22I | ATGCAT | 2 cut(s) | 13, 380 |
| EcoT38I | GRGCYC | 2 cut(s) | 147, 232 |
| ErhI | CCWWGG | 1 cut(s) | 155 |
| FaeI | CATG | 2 cut(s) | 280, 388 |
| FaiI | YATR | 7 cut(s) | 7, 9, 129, 278, 291, 316, 386 |
| FatI | CATG | 2 cut(s) | 276, 384 |
| FbaI | TGATCA | 1 cut(s) | 235 |
| Fnu4HI | GCNGC | 2 cut(s) | 108, 173 |
| FriOI | GRGCYC | 2 cut(s) | 147, 232 |
| Fsp4HI | GCNGC | 2 cut(s) | 108, 173 |
| FspBI | CTAG | 1 cut(s) | 95 |
| GluI | GCNGC | 2 cut(s) | 108, 173 |
| GsaI | CCCAGC | 1 cut(s) | 228 |
| Hin1II | CATG | 2 cut(s) | 280, 388 |
| HinfI | GANTC | 2 cut(s) | 329, 337 |
| Hpy166II | GTNNAC | 3 cut(s) | 215, 272, 312 |
| Hpy188I | TCNGA | 3 cut(s) | 18, 41, 328 |
| Hpy188III | TCNNGA | 1 cut(s) | 233 |
| Hpy8I | GTNNAC | 3 cut(s) | 215, 272, 312 |
| HpyCH4III | ACNGT | 1 cut(s) | 134 |
| HpyCH4V | TGCA | 3 cut(s) | 11, 215, 378 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 56, 203, 212, 221 |
| HpyF3I | CTNAG | 1 cut(s) | 306 |
| Hsp92II | CATG | 2 cut(s) | 280, 388 |
| Ksp22I | TGATCA | 1 cut(s) | 235 |
| Kzo9I | GATC | 1 cut(s) | 235 |
| LmnI | GCTCC | 3 cut(s) | 56, 157, 369 |
| LpnPI | CCDG | 8 cut(s) | 13, 132, 175, 195, 210, 216, 231, 372 |
| Lsp1109I | GCAGC | 2 cut(s) | 119, 184 |
| LweI | GCATC | 2 cut(s) | 250, 365 |
| MaeI | CTAG | 1 cut(s) | 95 |
| MaeIII | GTNAC | 1 cut(s) | 330 |
| MalI | GATC | 1 cut(s) | 237 |
| MboI | GATC | 1 cut(s) | 235 |
| MboII | GAAGA | 2 cut(s) | 58, 374 |
| MhlI | GDGCHC | 3 cut(s) | 147, 217, 232 |
| MluCI | AATT | 1 cut(s) | 165 |
| MlyI | GAGTC | 2 cut(s) | 338, 346 |
| MnlI | CCTC | 2 cut(s) | 64, 273 |
| Mph1103I | ATGCAT | 2 cut(s) | 13, 380 |
| MseI | TTAA | 1 cut(s) | 297 |
| MslI | CAYNNNNRTG | 1 cut(s) | 383 |
| MspA1I | CMGCKG | 1 cut(s) | 305 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 56, 203, 212, 221 |
| NdeII | GATC | 1 cut(s) | 235 |
| NlaIII | CATG | 2 cut(s) | 280, 388 |
| NlaIV | GGNNCC | 1 cut(s) | 371 |
| NmuCI | GTSAC | 1 cut(s) | 330 |
| NsiI | ATGCAT | 2 cut(s) | 13, 380 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 209 |
| PkrI | GCNGC | 2 cut(s) | 109, 174 |
| PleI | GAGTC | 2 cut(s) | 337, 345 |
| PpsI | GAGTC | 2 cut(s) | 337, 345 |
| PshAI | GACNNNNGTC | 1 cut(s) | 35 |
| Psp124BI | GAGCTC | 1 cut(s) | 147 |
| PspFI | CCCAGC | 1 cut(s) | 224 |
| PspN4I | GGNNCC | 1 cut(s) | 371 |
| PspPI | GGNCC | 1 cut(s) | 30 |
| PstNI | CAGNNNCTG | 1 cut(s) | 209 |
| PvuII | CAGCTG | 1 cut(s) | 305 |
| RsaI | GTAC | 1 cut(s) | 271 |
| RsaNI | GTAC | 1 cut(s) | 270 |
| RseI | CAYNNNNRTG | 1 cut(s) | 383 |
| SacI | GAGCTC | 1 cut(s) | 147 |
| SaqAI | TTAA | 1 cut(s) | 297 |
| SatI | GCNGC | 2 cut(s) | 108, 173 |
| Sau3AI | GATC | 1 cut(s) | 235 |
| Sau96I | GGNCC | 1 cut(s) | 30 |
| SchI | GAGTC | 2 cut(s) | 338, 346 |
| SduI | GDGCHC | 3 cut(s) | 147, 217, 232 |
| SetI | ASST | 7 cut(s) | 25, 61, 147, 199, 220, 307, 352 |
| SfaNI | GCATC | 2 cut(s) | 250, 365 |
| SinI | GGWCC | 1 cut(s) | 30 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 383 |
| Sse9I | AATT | 1 cut(s) | 165 |
| SspMI | CTAG | 1 cut(s) | 95 |
| SstI | GAGCTC | 1 cut(s) | 147 |
| StyI | CCWWGG | 1 cut(s) | 155 |
| TaaI | ACNGT | 1 cut(s) | 134 |
| TaqI | TCGA | 1 cut(s) | 69 |
| TasI | AATT | 1 cut(s) | 165 |
| TatI | WGTACW | 1 cut(s) | 269 |
| Tru1I | TTAA | 1 cut(s) | 297 |
| Tru9I | TTAA | 1 cut(s) | 297 |
| TscAI | CASTG | 2 cut(s) | 32, 139 |
| TseFI | GTSAC | 1 cut(s) | 330 |
| TseI | GCWGC | 2 cut(s) | 107, 172 |
| Tsp45I | GTSAC | 1 cut(s) | 330 |
| TspRI | CASTG | 2 cut(s) | 32, 139 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 209 |
| VneI | GTGCAC | 1 cut(s) | 213 |
| VpaK11BI | GGWCC | 1 cut(s) | 30 |
| XspI | CTAG | 1 cut(s) | 95 |
| Zsp2I | ATGCAT | 2 cut(s) | 13, 380 |