HIT zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g18700 FvH4_5g18700 FvH4_5g18700 FvH4_5g18700 FvH4_5g18700 |
| malus_domestica | MD06G1060400.v1.1 |
| prunus_persica | Prupe.5G071400_v2.0.a1 Prupe.5G071400_v2.0.a1 Prupe.5G071400_v2.0.a1 Prupe.5G071400_v2.0.a1 |
| pyrus_communis | pycom06g04990 |
| rosa_chinensis | RchiOBHm_Chr7g0202991 |
| rosa_laevigata | RLG00000003559 |
| rosa_multiflora | Rmu_sc0008159.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00254120 |
| rosa_rugosa | Rorug07G0074000 |
| rosa_samantha | Rh7AG202300 Rh7BG202400 Rh7CG213400 Rh7DG209400 |
| rosa_wichuraiana | Rw7G017690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1238 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1150 |
| AccI | GTMKAC | 2 cut(s) | 278, 1421 |
| AciI | CCGC | 3 cut(s) | 389, 392, 473 |
| AclI | AACGTT | 1 cut(s) | 92 |
| AclWI | GGATC | 3 cut(s) | 446, 1371, 1471 |
| AcoI | YGGCCR | 2 cut(s) | 411, 1206 |
| AcsI | RAATTY | 2 cut(s) | 289, 1552 |
| AcuI | CTGAAG | 2 cut(s) | 657, 1068 |
| AfaI | GTAC | 6 cut(s) | 244, 568, 667, 928, 1269, 1382 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 758, 1150 |
| AflII | CTTAAG | 1 cut(s) | 634 |
| AflIII | ACRYGT | 2 cut(s) | 431, 1416 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 905 |
| AjnI | CCWGG | 4 cut(s) | 531, 757, 1033, 1344 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 732, 764 |
| AluBI | AGCT | 7 cut(s) | 267, 362, 686, 848, 863, 1397, 1579 |
| AluI | AGCT | 7 cut(s) | 267, 362, 686, 848, 863, 1397, 1579 |
| Alw26I | GTCTC | 2 cut(s) | 806, 913 |
| AlwI | GGATC | 3 cut(s) | 446, 1371, 1471 |
| AoxI | GGCC | 4 cut(s) | 411, 1031, 1087, 1206 |
| ApeKI | GCWGC | 2 cut(s) | 831, 1473 |
| ApoI | RAATTY | 2 cut(s) | 289, 1552 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 173 |
| AspS9I | GGNCC | 5 cut(s) | 325, 880, 917, 981, 1087 |
| AsuC2I | CCSGG | 1 cut(s) | 615 |
| AsuHPI | GGTGA | 7 cut(s) | 8, 367, 428, 1075, 1090, 1333, 1360 |
| AsuII | TTCGAA | 1 cut(s) | 623 |
| AvaII | GGWCC | 4 cut(s) | 325, 880, 917, 981 |
| BalI | TGGCCA | 1 cut(s) | 1208 |
| BbsI | GAAGAC | 1 cut(s) | 663 |
| BbvI | GCAGC | 2 cut(s) | 843, 1460 |
| BccI | CCATC | 7 cut(s) | 186, 413, 703, 981, 1144, 1288, 1293 |
| BceAI | ACGGC | 3 cut(s) | 214, 429, 471 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 507, 541 |
| BciT130I | CCWGG | 4 cut(s) | 533, 759, 1035, 1346 |
| BclI | TGATCA | 1 cut(s) | 718 |
| BcnI | CCSGG | 1 cut(s) | 615 |
| BcoDI | GTCTC | 2 cut(s) | 806, 913 |
| BfaI | CTAG | 1 cut(s) | 53 |
| BfmI | CTRYAG | 1 cut(s) | 829 |
| BfrI | CTTAAG | 1 cut(s) | 634 |
| BfuAI | ACCTGC | 1 cut(s) | 1238 |
| BisI | GCNGC | 3 cut(s) | 392, 832, 1474 |
| BlpI | GCTNAGC | 1 cut(s) | 1580 |
| BlsI | GCNGC | 3 cut(s) | 393, 833, 1475 |
| BmcAI | AGTACT | 1 cut(s) | 1382 |
| Bme1390I | CCNGG | 5 cut(s) | 533, 615, 759, 1035, 1346 |
| Bme18I | GGWCC | 4 cut(s) | 325, 880, 917, 981 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 905 |
| BmgT120I | GGNCC | 5 cut(s) | 325, 880, 917, 981, 1087 |
| BmiI | GGNNCC | 3 cut(s) | 176, 882, 919 |
| BmrFI | CCNGG | 5 cut(s) | 533, 615, 759, 1035, 1346 |
| BmrI | ACTGGG | 1 cut(s) | 1452 |
| BmsI | GCATC | 2 cut(s) | 927, 1130 |
| BmuI | ACTGGG | 1 cut(s) | 1452 |
| BoxI | GACNNNNGTC | 1 cut(s) | 330 |
| BpiI | GAAGAC | 1 cut(s) | 663 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1580 |
| Bpu14I | TTCGAA | 1 cut(s) | 623 |
| BpuEI | CTTGAG | 1 cut(s) | 907 |
| BpuMI | CCSGG | 1 cut(s) | 615 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 758, 1150 |
| Bse118I | RCCGGY | 3 cut(s) | 377, 409, 413 |
| Bse1I | ACTGG | 2 cut(s) | 1378, 1447 |
| Bse3DI | GCAATG | 4 cut(s) | 388, 814, 1186, 1227 |
| BseBI | CCWGG | 4 cut(s) | 533, 759, 1035, 1346 |
| BseGI | GGATG | 2 cut(s) | 1276, 1280 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 758, 1150 |
| BseMI | GCAATG | 4 cut(s) | 388, 814, 1186, 1227 |
| BseMII | CTCAG | 1 cut(s) | 343 |
| BseNI | ACTGG | 2 cut(s) | 1378, 1447 |
| BseRI | GAGGAG | 2 cut(s) | 186, 521 |
| BseX3I | CGGCCG | 1 cut(s) | 411 |
| BseXI | GCAGC | 2 cut(s) | 843, 1460 |
| Bsh1285I | CGRYCG | 1 cut(s) | 414 |
| BshFI | GGCC | 4 cut(s) | 413, 1033, 1089, 1208 |
| BsiEI | CGRYCG | 1 cut(s) | 414 |
| BsiSI | CCGG | 4 cut(s) | 378, 410, 414, 614 |
| BslFI | GGGAC | 1 cut(s) | 965 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 758, 1150 |
| BsmAI | GTCTC | 2 cut(s) | 806, 913 |
| BsmFI | GGGAC | 1 cut(s) | 965 |
| BsmI | GAATGC | 2 cut(s) | 1190, 1519 |
| BsnI | GGCC | 4 cut(s) | 413, 1033, 1089, 1208 |
| Bsp119I | TTCGAA | 1 cut(s) | 623 |
| Bsp1407I | TGTACA | 2 cut(s) | 566, 1267 |
| Bsp143I | GATC | 6 cut(s) | 451, 718, 850, 1363, 1463, 1480 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1580 |
| BspACI | CCGC | 3 cut(s) | 389, 392, 473 |
| BspANI | GGCC | 4 cut(s) | 413, 1033, 1089, 1208 |
| BspCNI | CTCAG | 1 cut(s) | 342 |
| BspLI | GGNNCC | 3 cut(s) | 176, 882, 919 |
| BspMAI | CTGCAG | 1 cut(s) | 833 |
| BspMI | ACCTGC | 1 cut(s) | 1238 |
| BspPI | GGATC | 3 cut(s) | 446, 1371, 1471 |
| BspT104I | TTCGAA | 1 cut(s) | 623 |
| BspTI | CTTAAG | 1 cut(s) | 634 |
| BsrDI | GCAATG | 4 cut(s) | 388, 814, 1186, 1227 |
| BsrFI | RCCGGY | 3 cut(s) | 377, 409, 413 |
| BsrGI | TGTACA | 2 cut(s) | 566, 1267 |
| BsrI | ACTGG | 2 cut(s) | 1378, 1447 |
| BssAI | RCCGGY | 3 cut(s) | 377, 409, 413 |
| BssMI | GATC | 6 cut(s) | 451, 718, 850, 1363, 1463, 1480 |
| BssNAI | GTATAC | 1 cut(s) | 1422 |
| Bst1107I | GTATAC | 1 cut(s) | 1422 |
| Bst2UI | CCWGG | 4 cut(s) | 533, 759, 1035, 1346 |
| Bst4CI | ACNGT | 2 cut(s) | 1385, 1508 |
| Bst6I | CTCTTC | 1 cut(s) | 983 |
| BstAFI | CTTAAG | 1 cut(s) | 634 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 840, 1185 |
| BstAUI | TGTACA | 2 cut(s) | 566, 1267 |
| BstBI | TTCGAA | 1 cut(s) | 623 |
| BstC8I | GCNNGC | 3 cut(s) | 227, 411, 861 |
| BstDEI | CTNAG | 3 cut(s) | 329, 1199, 1580 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 756 |
| BstF5I | GGATG | 2 cut(s) | 1276, 1280 |
| BstKTI | GATC | 6 cut(s) | 454, 721, 853, 1366, 1466, 1483 |
| BstMAI | GTCTC | 2 cut(s) | 806, 913 |
| BstMBI | GATC | 6 cut(s) | 451, 718, 850, 1363, 1463, 1480 |
| BstMCI | CGRYCG | 1 cut(s) | 414 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 247, 256, 840, 1185 |
| BstNI | CCWGG | 4 cut(s) | 533, 759, 1035, 1346 |
| BstNSI | RCATGY | 5 cut(s) | 435, 1268, 1344, 1377, 1420 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 330 |
| BstSCI | CCNGG | 5 cut(s) | 531, 613, 757, 1033, 1344 |
| BstSFI | CTRYAG | 1 cut(s) | 829 |
| BstV1I | GCAGC | 2 cut(s) | 843, 1460 |
| BstV2I | GAAGAC | 1 cut(s) | 663 |
| BstX2I | RGATCY | 2 cut(s) | 1363, 1463 |
| BstYI | RGATCY | 2 cut(s) | 1363, 1463 |
| BstZ17I | GTATAC | 1 cut(s) | 1422 |
| BstZI | CGGCCG | 1 cut(s) | 411 |
| BsuRI | GGCC | 4 cut(s) | 413, 1033, 1089, 1208 |
| BtgZI | GCGATG | 2 cut(s) | 555, 959 |
| BtsCI | GGATG | 2 cut(s) | 1276, 1280 |
| BtsIMutI | CAGTG | 1 cut(s) | 1440 |
| BveI | ACCTGC | 1 cut(s) | 1238 |
| Cac8I | GCNNGC | 3 cut(s) | 227, 411, 861 |
| Cfr10I | RCCGGY | 3 cut(s) | 377, 409, 413 |
| Cfr13I | GGNCC | 5 cut(s) | 325, 880, 917, 981, 1087 |
| CseI | GACGC | 1 cut(s) | 524 |
| Csp6I | GTAC | 6 cut(s) | 243, 567, 666, 927, 1268, 1381 |
| CviAII | CATG | 9 cut(s) | 236, 432, 778, 835, 941, 1265, 1341, 1374, 1417 |
| CviQI | GTAC | 6 cut(s) | 243, 567, 666, 927, 1268, 1381 |
| DdeI | CTNAG | 3 cut(s) | 329, 1199, 1580 |
| DpnI | GATC | 6 cut(s) | 453, 720, 852, 1365, 1465, 1482 |
| DpnII | GATC | 6 cut(s) | 451, 718, 850, 1363, 1463, 1480 |
| DriI | GACNNNNNGTC | 1 cut(s) | 905 |
| EaeI | YGGCCR | 2 cut(s) | 411, 1206 |
| EagI | CGGCCG | 1 cut(s) | 411 |
| Eam1104I | CTCTTC | 1 cut(s) | 983 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 905 |
| EarI | CTCTTC | 1 cut(s) | 983 |
| EciI | GGCGGA | 1 cut(s) | 378 |
| EclXI | CGGCCG | 1 cut(s) | 411 |
| Eco147I | AGGCCT | 1 cut(s) | 1033 |
| Eco32I | GATATC | 2 cut(s) | 826, 1357 |
| Eco47I | GGWCC | 4 cut(s) | 325, 880, 917, 981 |
| Eco52I | CGGCCG | 1 cut(s) | 411 |
| Eco57I | CTGAAG | 2 cut(s) | 657, 1068 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 756 |
| EcoO109I | RGGNCCY | 2 cut(s) | 325, 880 |
| EcoRI | GAATTC | 1 cut(s) | 1552 |
| EcoRII | CCWGG | 4 cut(s) | 531, 757, 1033, 1344 |
| EcoRV | GATATC | 2 cut(s) | 826, 1357 |
| EcoT22I | ATGCAT | 1 cut(s) | 942 |
| FaeI | CATG | 9 cut(s) | 239, 435, 781, 838, 944, 1268, 1344, 1377, 1420 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 617, 649, 655, 687, 675, 707, 869, 901 |
| FaqI | GGGAC | 1 cut(s) | 965 |
| FatI | CATG | 9 cut(s) | 235, 431, 777, 834, 940, 1264, 1340, 1373, 1416 |
| FbaI | TGATCA | 1 cut(s) | 718 |
| FblI | GTMKAC | 2 cut(s) | 278, 1421 |
| Fnu4HI | GCNGC | 3 cut(s) | 392, 832, 1474 |
| FokI | GGATG | 2 cut(s) | 1263, 1267 |
| Fsp4HI | GCNGC | 3 cut(s) | 392, 832, 1474 |
| FspBI | CTAG | 1 cut(s) | 53 |
| GluI | GCNGC | 3 cut(s) | 392, 832, 1474 |
| HaeIII | GGCC | 4 cut(s) | 413, 1033, 1089, 1208 |
| HapII | CCGG | 4 cut(s) | 378, 410, 414, 614 |
| HgaI | GACGC | 1 cut(s) | 524 |
| Hin1II | CATG | 9 cut(s) | 239, 435, 781, 838, 944, 1268, 1344, 1377, 1420 |
| HincII | GTYRAC | 1 cut(s) | 279 |
| HindII | GTYRAC | 1 cut(s) | 279 |
| HindIII | AAGCTT | 2 cut(s) | 360, 1395 |
| HinfI | GANTC | 1 cut(s) | 713 |
| HpaII | CCGG | 4 cut(s) | 378, 410, 414, 614 |
| HphI | GGTGA | 7 cut(s) | 8, 367, 428, 1075, 1090, 1333, 1360 |
| Hpy166II | GTNNAC | 2 cut(s) | 279, 1422 |
| Hpy188I | TCNGA | 5 cut(s) | 456, 492, 676, 718, 1598 |
| Hpy188III | TCNNGA | 4 cut(s) | 33, 449, 915, 1461 |
| Hpy8I | GTNNAC | 2 cut(s) | 279, 1422 |
| Hpy99I | CGWCG | 3 cut(s) | 283, 374, 450 |
| HpyAV | CCTTC | 6 cut(s) | 315, 316, 871, 1023, 1130, 1226 |
| HpyCH4III | ACNGT | 2 cut(s) | 1385, 1508 |
| HpyCH4IV | ACGT | 4 cut(s) | 92, 369, 668, 1570 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 247, 256, 840, 1185 |
| HpyF3I | CTNAG | 3 cut(s) | 329, 1199, 1580 |
| HpySE526I | ACGT | 4 cut(s) | 92, 369, 668, 1570 |
| Hsp92II | CATG | 9 cut(s) | 239, 435, 781, 838, 944, 1268, 1344, 1377, 1420 |
| KroI | GCCGGC | 1 cut(s) | 409 |
| KroNI | GCCGGC | 1 cut(s) | 411 |
| Ksp22I | TGATCA | 1 cut(s) | 718 |
| Kzo9I | GATC | 6 cut(s) | 451, 718, 850, 1363, 1463, 1480 |
| LmnI | GCTCC | 1 cut(s) | 391 |
| Lsp1109I | GCAGC | 2 cut(s) | 843, 1460 |
| LweI | GCATC | 2 cut(s) | 927, 1130 |
| MaeI | CTAG | 1 cut(s) | 53 |
| MaeII | ACGT | 4 cut(s) | 92, 369, 668, 1570 |
| MaeIII | GTNAC | 8 cut(s) | 62, 373, 701, 1063, 1070, 1078, 1238, 1348 |
| MalI | GATC | 6 cut(s) | 453, 720, 852, 1365, 1465, 1482 |
| MboI | GATC | 6 cut(s) | 451, 718, 850, 1363, 1463, 1480 |
| MboII | GAAGA | 7 cut(s) | 338, 564, 663, 1000, 1061, 1149, 1490 |
| MflI | RGATCY | 2 cut(s) | 1363, 1463 |
| MlsI | TGGCCA | 1 cut(s) | 1208 |
| MluCI | AATT | 8 cut(s) | 118, 169, 289, 577, 587, 735, 1102, 1552 |
| MluNI | TGGCCA | 1 cut(s) | 1208 |
| MmeI | TCCRAC | 1 cut(s) | 998 |
| Mox20I | TGGCCA | 1 cut(s) | 1208 |
| Mph1103I | ATGCAT | 1 cut(s) | 942 |
| MroNI | GCCGGC | 1 cut(s) | 409 |
| MroXI | GAANNNNTTC | 1 cut(s) | 173 |
| MscI | TGGCCA | 1 cut(s) | 1208 |
| MseI | TTAA | 6 cut(s) | 98, 147, 590, 635, 707, 867 |
| MslI | CAYNNNNRTG | 2 cut(s) | 708, 1257 |
| Msp20I | TGGCCA | 1 cut(s) | 1208 |
| MspCI | CTTAAG | 1 cut(s) | 634 |
| MspI | CCGG | 4 cut(s) | 378, 410, 414, 614 |
| MspR9I | CCNGG | 5 cut(s) | 533, 615, 759, 1035, 1346 |
| Mva1269I | GAATGC | 2 cut(s) | 1190, 1519 |
| MvaI | CCWGG | 4 cut(s) | 533, 759, 1035, 1346 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 247, 256, 840, 1185 |
| NaeI | GCCGGC | 1 cut(s) | 411 |
| NciI | CCSGG | 1 cut(s) | 615 |
| NdeII | GATC | 6 cut(s) | 451, 718, 850, 1363, 1463, 1480 |
| NgoMIV | GCCGGC | 1 cut(s) | 409 |
| NlaIII | CATG | 9 cut(s) | 239, 435, 781, 838, 944, 1268, 1344, 1377, 1420 |
| NlaIV | GGNNCC | 3 cut(s) | 176, 882, 919 |
| NmuCI | GTSAC | 7 cut(s) | 62, 373, 701, 1063, 1078, 1238, 1348 |
| NsiI | ATGCAT | 1 cut(s) | 942 |
| NspI | RCATGY | 5 cut(s) | 435, 1268, 1344, 1377, 1420 |
| NspV | TTCGAA | 1 cut(s) | 623 |
| PceI | AGGCCT | 1 cut(s) | 1033 |
| PciI | ACATGT | 2 cut(s) | 431, 1416 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 442 |
| PctI | GAATGC | 2 cut(s) | 1190, 1519 |
| PdiI | GCCGGC | 1 cut(s) | 411 |
| PdmI | GAANNNNTTC | 1 cut(s) | 173 |
| PfeI | GAWTC | 1 cut(s) | 713 |
| PflFI | GACNNNGTC | 1 cut(s) | 283 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1150 |
| PfoI | TCCNGGA | 1 cut(s) | 757 |
| PkrI | GCNGC | 3 cut(s) | 393, 833, 1475 |
| PpuMI | RGGWCCY | 2 cut(s) | 325, 880 |
| PscI | ACATGT | 2 cut(s) | 431, 1416 |
| PshAI | GACNNNNGTC | 1 cut(s) | 330 |
| Psp1406I | AACGTT | 1 cut(s) | 92 |
| Psp5II | RGGWCCY | 2 cut(s) | 325, 880 |
| Psp6I | CCWGG | 4 cut(s) | 531, 757, 1033, 1344 |
| PspGI | CCWGG | 4 cut(s) | 531, 757, 1033, 1344 |
| PspN4I | GGNNCC | 3 cut(s) | 176, 882, 919 |
| PspPI | GGNCC | 5 cut(s) | 325, 880, 917, 981, 1087 |
| PspPPI | RGGWCCY | 2 cut(s) | 325, 880 |
| PstI | CTGCAG | 1 cut(s) | 833 |
| PsuI | RGATCY | 2 cut(s) | 1363, 1463 |
| PsyI | GACNNNGTC | 1 cut(s) | 283 |
| RsaI | GTAC | 6 cut(s) | 244, 568, 667, 928, 1269, 1382 |
| RsaNI | GTAC | 6 cut(s) | 243, 567, 666, 927, 1268, 1381 |
| RseI | CAYNNNNRTG | 2 cut(s) | 708, 1257 |
| SalI | GTCGAC | 1 cut(s) | 277 |
| SaqAI | TTAA | 6 cut(s) | 98, 147, 590, 635, 707, 867 |
| SatI | GCNGC | 3 cut(s) | 392, 832, 1474 |
| Sau3AI | GATC | 6 cut(s) | 451, 718, 850, 1363, 1463, 1480 |
| Sau96I | GGNCC | 5 cut(s) | 325, 880, 917, 981, 1087 |
| ScaI | AGTACT | 1 cut(s) | 1382 |
| ScrFI | CCNGG | 5 cut(s) | 533, 615, 759, 1035, 1346 |
| SfaNI | GCATC | 2 cut(s) | 927, 1130 |
| SfcI | CTRYAG | 1 cut(s) | 829 |
| SfuI | TTCGAA | 1 cut(s) | 623 |
| SinI | GGWCC | 4 cut(s) | 325, 880, 917, 981 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 708, 1257 |
| SmlI | CTYRAG | 2 cut(s) | 634, 886 |
| SmoI | CTYRAG | 2 cut(s) | 634, 886 |
| Sse9I | AATT | 8 cut(s) | 118, 169, 289, 577, 587, 735, 1102, 1552 |
| SseBI | AGGCCT | 1 cut(s) | 1033 |
| SsiI | CCGC | 3 cut(s) | 389, 392, 473 |
| SspI | AATATT | 3 cut(s) | 29, 108, 1295 |
| SspMI | CTAG | 1 cut(s) | 53 |
| StuI | AGGCCT | 1 cut(s) | 1033 |
| StyD4I | CCNGG | 5 cut(s) | 531, 613, 757, 1033, 1344 |
| TaaI | ACNGT | 2 cut(s) | 1385, 1508 |
| TaiI | ACGT | 4 cut(s) | 95, 372, 671, 1573 |
| TaqI | TCGA | 6 cut(s) | 278, 308, 498, 504, 623, 1288 |
| TasI | AATT | 8 cut(s) | 118, 169, 289, 577, 587, 735, 1102, 1552 |
| TatI | WGTACW | 3 cut(s) | 566, 1267, 1380 |
| TauI | GCSGC | 1 cut(s) | 394 |
| TfiI | GAWTC | 1 cut(s) | 713 |
| Tru1I | TTAA | 6 cut(s) | 98, 147, 590, 635, 707, 867 |
| Tru9I | TTAA | 6 cut(s) | 98, 147, 590, 635, 707, 867 |
| TscAI | CASTG | 1 cut(s) | 1447 |
| TseFI | GTSAC | 7 cut(s) | 62, 373, 701, 1063, 1078, 1238, 1348 |
| TseI | GCWGC | 2 cut(s) | 831, 1473 |
| Tsp45I | GTSAC | 7 cut(s) | 62, 373, 701, 1063, 1078, 1238, 1348 |
| TspDTI | ATGAA | 9 cut(s) | 199, 675, 726, 981, 1197, 1208, 1517, 1526, 1579 |
| TspGWI | ACGGA | 3 cut(s) | 189, 331, 807 |
| TspRI | CASTG | 1 cut(s) | 1447 |
| Tth111I | GACNNNGTC | 1 cut(s) | 283 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1150 |
| Vha464I | CTTAAG | 1 cut(s) | 634 |
| VpaK11BI | GGWCC | 4 cut(s) | 325, 880, 917, 981 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 756 |
| XapI | RAATTY | 2 cut(s) | 289, 1552 |
| XceI | RCATGY | 5 cut(s) | 435, 1268, 1344, 1377, 1420 |
| XmiI | GTMKAC | 2 cut(s) | 278, 1421 |
| XmnI | GAANNNNTTC | 1 cut(s) | 173 |
| XspI | CTAG | 1 cut(s) | 53 |
| ZrmI | AGTACT | 1 cut(s) | 1382 |
| Zsp2I | ATGCAT | 1 cut(s) | 942 |