pycom06g09660

WD domain, G-beta repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0012794
Physical Location & Seq
Reverse (-)
14950403 .. 14954187
3785 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2469 bp
ATGGAGGATGCAGTGGCTGAGGAAGTGACCCCATTGGATCCAGCAGAGGTTGCACAACTCCAAAGGAAAGAGAATGACTACTCACTAAAATCTGAAAATGGCAACCCATTGGAATGCCAAGAGATGCGTATACCAGTTGAGGGTGATTATCCCTTAAGCTCACGACATGAGATTTTAGAGAAAGTAGATATGGCCGGCTATATTAACAAATTAGAACACCCATATAGCGGCCTAGGCTTTAGGAATGATGTTGGTTTCATGGAGGAAGAGCTAACTGTGAGGAATTACAGTAGTTCAAACCTAGCCATGCTTGATACATCAAACAATCAAGGAAGAATGCAATCTAGGCAGAACCCGCAACAACATTTATTTCAGCTAGCAAGTGGATCAGGAAGTGGGAGTTCACAAGTCAAAACTGCAGTCAAGGATACCGGGAAGGCAATTTCCGGTGGCTTGGAGAATGAGGGGGCCACATCTTTCCCTGGTTTTTGGAATAAAAGGGAATTAAGTGACAATCACTATGACGTTGTGGAAGAATTGACAAACATTGAAAATACGGGGGCTTCAGCCAACACTTATGCAGGTATTCGGACTAAAATCCTATCTAGACCAGGATTTTCTGAGTTTTTTGTTAAAAATACACTGAAGGGTAAGGGTGTCATATTGAAGGGTCCCAATCATGAGAATTGTCACATTGAATCTAGAAACCTGAATAGTTTGAAGGTGGCCGGTGATTCTTTGGTAGCTTCTAATCCAACAATGAGTATGAATGCAAATGTCGTTATGCCTTCTTCCAATGGTGTGAATGTCGGGCTTAGGGGTGGTGGCTCTAATCATGATGAAAACAGTTTGAGAGAATGGCTGAATATTGGACGTCCTAAGGCGAATAAAGTTGAATGCTTGTATATATTTAGACAAATAGTGGATCTGGTGGATAGTTTTCATTCTGAAGGAGTTTCTTTGCCTGGATTGCGACCTTCTTTCTTCAAGTTGTTACCTTCAAATCAGGTTAAGTATGTTGGCTTACCAGTCCGGAACGAGATGCTTGAGAGTATGAGGGATAGAGATACATCCCTTTCAGAAAATAATTCAATCAGGAAAAAGCAAAAGATAAGTCAGAACACTAGATTGCACTGGCCCCAGTTCTCTAGCACTGCCTACTTCATGCATGATAATGTGAATACCAGCCACATCAACATCACTCGTTTGCAGAACAGAAGTGATGCATTTGATGAACATAATCCAAGAACAAGGCATGAGATACGTACCATATCCACCAATCCTCATATGGATTATGCAGCTCAGCAGTTTACTCCAATAAGCGAGCTATTGGAAGAGAAGTGGTATGTTAGTCCTGAGGAACTCAGTGAAGGAAGTTGCACAATTTTTTCAAATATCTACAGTCTGGGTGTTCTTCTTTTTGAGTTACTTGCTCATTTTGACTCAAATAGAGCCCTTGCTGCCGCAATGTCCAATCTGCAGCACAGAATTCTTCCCCCAAATTTCCTGTCAGAAAATGGTAAGGAGGTTGGATTTATTATGTGGCTTCTTCATCCTGAACCATCTTCACGCCCAACGACAAGGCAAATTCTACAATCTGAAGTAGTTAACAGGTTACAGGAGGTTTCTGTAAAAAAATTGTCATCTTCTGTGGAACAAGAGGATGCAGAATTGGATTTATTATTGCATTTCCTTACTTCTTTGAAAGAACAGAAGCAGAACCATGCTGCAAATTTGATGGAAACCATTGGGTTCATAGAAGCAGATGTTGAAGAAGTGGAGAGGAGGCACTCTCTAAGAAAACCCTTGATTGATTGTGGCTTGTACGATGAATCCCTCAGTGGAAGGAAATATATGTTCGTGAACAAAGAAGATTCAAGGTCAGAGGTGCTTTCTCCATTATTTCCTGTTCCTAGTTCAAATGAGTCGAGGTTGATGAAAAACATAGATCAGTTTGAGAGTGCTTATTTCTCGATGAGATCAAGAATTCAGATTCCTGAGACTGATTCTAGAATACGCAGAGATAAAGATTTATTAAGAACTTGCAATAATTGGTATGTGGGAACAAAGGATGAAGACAAGGAGACATGCACTGATCGACTGGGAGCCATCTTTGATGGTTTGTGTAAATATTCGCGGTATAGTAAGTTTGAAGTACGTGGCATACTAAGAAATGGAGATTTCAGCAGTTCCTCTAAAGTTATATCTTCTATGAGTTTTGATCGGGATGAAGACTATTTTGCTACTGCTGGGGTTTCAATGAAAATTAAGATTTTTGAGTTTAATGCTTTCTTCAACGATTCTGTTGATATTCATTATCCGGTGATTGAGATGTCAAACAAATCAAGGATCACATGTGTTTGCTGGAACAACTACATCAAAAACTATCTGGCTTCATCTGATTATGATGGTGTAATCAAGCCAGTTATGGGATGCCAGCACTGGTCAAGAGTTTGCTCAATACACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0031461 GO:0032991 GO:0044424 GO:0044464 GO:0080008 GO:1902494 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
Pkinase WD40

Protein Analysis

823

Amino Acids

93.14

Weight (kDa)

5.82

Isoelectric Point (pI)

55.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 442 - 534 2.8e-06 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012794)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11110
fragaria_vesca FvH4_5g04010 FvH4_5g04010
malus_domestica MD06G1101400.v1.1 MD14G1121100.v1.1
prunus_persica Prupe.5G114800_v2.0.a1 Prupe.5G114800_v2.0.a1
pyrus_communis pycom06g09660
rosa_chinensis RchiOBHm_Chr7g0195501
rosa_laevigata RLG00000004114
rosa_multiflora Rmu_ssc0000078.1_g000001
rosa_roxburghii Rroxscaffold_3G00260410
rosa_rugosa Rorug07G0023900
rosa_samantha Rh7AG151400 Rh7BG153100 Rh7CG156600 Rh7DG152400
rosa_wichuraiana Rw7G012930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 877
Acc36I ACCTGC 1 cut(s) 572
AccI GTMKAC 1 cut(s) 130
AccII CGCG 1 cut(s) 2137
AccIII TCCGGA 1 cut(s) 1032
AciI CCGC 4 cut(s) 228, 356, 1464, 2137
AclWI GGATC 5 cut(s) 32, 45, 394, 933, 2357
AcoI YGGCCR 2 cut(s) 192, 726
AcsI RAATTY 5 cut(s) 1488, 1501, 1587, 1732, 1986
AcuI CTGAAG 4 cut(s) 549, 665, 969, 1620
AcyI GRCGYC 1 cut(s) 874
AfaI GTAC 3 cut(s) 1267, 1826, 2157
AfiI CCNNNNNNNGG 3 cut(s) 140, 227, 2429
AflII CTTAAG 1 cut(s) 154
AflIII ACRYGT 1 cut(s) 2354
AjnI CCWGG 3 cut(s) 481, 610, 964
AluBI AGCT 6 cut(s) 159, 271, 376, 746, 1301, 1327
AluI AGCT 6 cut(s) 159, 271, 376, 746, 1301, 1327
Alw26I GTCTC 2 cut(s) 1994, 2078
AlwI GGATC 5 cut(s) 32, 45, 394, 933, 2357
AlwNI CAGNNNCTG 1 cut(s) 17
Aor13HI TCCGGA 1 cut(s) 1032
AoxI GGCC 5 cut(s) 192, 229, 468, 726, 1136
ApeKI GCWGC 4 cut(s) 1298, 1460, 1480, 1727
ApoI RAATTY 5 cut(s) 1488, 1501, 1587, 1732, 1986
ArsI GACNNNNNNTTYG 6 cut(s) 405, 437, 1099, 1131, 1493, 1525
AspA2I CCTAGG 1 cut(s) 232
AspS9I GGNCC 3 cut(s) 468, 671, 1137
AsuC2I CCSGG 1 cut(s) 433
AsuHPI GGTGA 3 cut(s) 155, 743, 2335
AsuNHI GCTAGC 1 cut(s) 376
AvaII GGWCC 1 cut(s) 671
AvrII CCTAGG 1 cut(s) 232
AxyI CCTNAGG 2 cut(s) 879, 1356
BamHI GGATCC 1 cut(s) 37
BanII GRGCYC 1 cut(s) 1456
BbsI GAAGAC 2 cut(s) 2082, 2238
BbvCI CCTCAGC 1 cut(s) 18
BbvI GCAGC 4 cut(s) 1310, 1447, 1492, 1714
BccI CCATC 5 cut(s) 1570, 1732, 2111, 2117, 2402
BciT130I CCWGG 3 cut(s) 483, 612, 966
BciVI GTATCC 1 cut(s) 421
BcnI CCSGG 1 cut(s) 433
BcoDI GTCTC 2 cut(s) 1994, 2078
BfmI CTRYAG 3 cut(s) 417, 1399, 1478
BfrI CTTAAG 1 cut(s) 154
BfuAI ACCTGC 1 cut(s) 572
BfuI GTATCC 1 cut(s) 421
BisI GCNGC 6 cut(s) 229, 1299, 1461, 1464, 1481, 1728
BlnI CCTAGG 1 cut(s) 232
BlpI GCTNAGC 1 cut(s) 1302
BlsI GCNGC 6 cut(s) 230, 1300, 1462, 1465, 1482, 1729
Bme1390I CCNGG 4 cut(s) 433, 483, 612, 966
Bme18I GGWCC 1 cut(s) 671
BmgT120I GGNCC 3 cut(s) 468, 671, 1137
BmiI GGNNCC 6 cut(s) 39, 469, 672, 673, 1139, 2107
BmrFI CCNGG 4 cut(s) 433, 483, 612, 966
BmrI ACTGGG 2 cut(s) 1135, 2111
BmsI GCATC 5 cut(s) 114, 1032, 1213, 1654, 2423
BmtI GCTAGC 1 cut(s) 380
BmuI ACTGGG 2 cut(s) 1135, 2111
BpiI GAAGAC 2 cut(s) 2082, 2238
BplI GAGNNNNNCTC 2 cut(s) 1777, 1809
Bpu10I CCTNAGC 2 cut(s) 18, 815
Bpu1102I GCTNAGC 1 cut(s) 1302
BpuEI CTTGAG 1 cut(s) 1067
BpuMI CCSGG 1 cut(s) 433
BsaAI YACGTR 2 cut(s) 1265, 2159
BsaHI GRCGYC 1 cut(s) 874
BsaJI CCNNGG 2 cut(s) 232, 481
BsaWI WCCGGW 3 cut(s) 446, 1032, 2320
Bsc4I CCNNNNNNNGG 3 cut(s) 140, 227, 2429
Bse118I RCCGGY 2 cut(s) 194, 728
Bse1I ACTGG 7 cut(s) 134, 1028, 1139, 1141, 2106, 2423, 2447
Bse21I CCTNAGG 2 cut(s) 879, 1356
Bse3DI GCAATG 1 cut(s) 1473
BseAI TCCGGA 1 cut(s) 1032
BseBI CCWGG 3 cut(s) 483, 612, 966
BseDI CCNNGG 2 cut(s) 232, 481
BseGI GGATG 7 cut(s) 13, 1070, 1552, 1669, 2077, 2233, 2438
BseLI CCNNNNNNNGG 3 cut(s) 140, 227, 2429
BseMI GCAATG 1 cut(s) 1473
BseMII CTCAG 7 cut(s) 9, 612, 1316, 1347, 1378, 1852, 1989
BseNI ACTGG 7 cut(s) 134, 1028, 1139, 1141, 2106, 2423, 2447
BseRI GAGGAG 1 cut(s) 1798
BseXI GCAGC 4 cut(s) 1310, 1447, 1492, 1714
BseYI CCCAGC 1 cut(s) 2249
Bsh1236I CGCG 1 cut(s) 2137
BshFI GGCC 5 cut(s) 194, 231, 470, 728, 1138
BsiSI CCGG 6 cut(s) 195, 432, 447, 729, 1033, 2321
BslFI GGGAC 1 cut(s) 657
BslI CCNNNNNNNGG 3 cut(s) 140, 227, 2429
BsmAI GTCTC 2 cut(s) 1994, 2078
BsmFI GGGAC 1 cut(s) 657
BsmI GAATGC 4 cut(s) 119, 342, 775, 902
BsnI GGCC 5 cut(s) 194, 231, 470, 728, 1138
Bsp1286I GDGCHC 1 cut(s) 1456
Bsp13I TCCGGA 1 cut(s) 1032
Bsp143I GATC 8 cut(s) 37, 386, 925, 1948, 1979, 2095, 2221, 2349
Bsp1720I GCTNAGC 1 cut(s) 1302
BspACI CCGC 4 cut(s) 228, 356, 1464, 2137
BspANI GGCC 5 cut(s) 194, 231, 470, 728, 1138
BspCNI CTCAG 7 cut(s) 10, 613, 1315, 1348, 1377, 1851, 1990
BspEI TCCGGA 1 cut(s) 1032
BspFNI CGCG 1 cut(s) 2137
BspHI TCATGA 2 cut(s) 679, 835
BspLI GGNNCC 6 cut(s) 39, 469, 672, 673, 1139, 2107
BspMAI CTGCAG 2 cut(s) 421, 1482
BspMI ACCTGC 1 cut(s) 572
BspOI GCTAGC 1 cut(s) 380
BspPI GGATC 5 cut(s) 32, 45, 394, 933, 2357
BspQI GCTCTTC 1 cut(s) 261
BspTI CTTAAG 1 cut(s) 154
BsrDI GCAATG 1 cut(s) 1473
BsrFI RCCGGY 2 cut(s) 194, 728
BsrI ACTGG 7 cut(s) 134, 1028, 1139, 1141, 2106, 2423, 2447
BssAI RCCGGY 2 cut(s) 194, 728
BssECI CCNNGG 2 cut(s) 232, 481
BssMI GATC 8 cut(s) 37, 386, 925, 1948, 1979, 2095, 2221, 2349
BssNAI GTATAC 1 cut(s) 131
BssNI GRCGYC 1 cut(s) 874
BssT1I CCWWGG 1 cut(s) 232
Bst1107I GTATAC 1 cut(s) 131
Bst2UI CCWGG 3 cut(s) 483, 612, 966
Bst4CI ACNGT 4 cut(s) 277, 290, 848, 1403
Bst6I CTCTTC 2 cut(s) 261, 1329
BstACI GRCGYC 1 cut(s) 874
BstAFI CTTAAG 1 cut(s) 154
BstAPI GCANNNNNTGC 1 cut(s) 50
BstBAI YACGTR 2 cut(s) 1265, 2159
BstC8I GCNNGC 4 cut(s) 196, 378, 1325, 2438
BstF5I GGATG 7 cut(s) 13, 1070, 1552, 1669, 2077, 2233, 2438
BstFNI CGCG 1 cut(s) 2137
BstKTI GATC 8 cut(s) 40, 389, 928, 1951, 1982, 2098, 2224, 2352
BstMAI GTCTC 2 cut(s) 1994, 2078
BstMBI GATC 8 cut(s) 37, 386, 925, 1948, 1979, 2095, 2221, 2349
BstMWI GCNNNNNNNGC 6 cut(s) 50, 234, 346, 355, 970, 1460
BstNI CCWGG 3 cut(s) 483, 612, 966
BstNSI RCATGY 2 cut(s) 2091, 2358
BstSCI CCNGG 4 cut(s) 431, 481, 610, 964
BstSFI CTRYAG 3 cut(s) 417, 1399, 1478
BstSNI TACGTA 1 cut(s) 1265
BstUI CGCG 1 cut(s) 2137
BstV1I GCAGC 4 cut(s) 1310, 1447, 1492, 1714
BstV2I GAAGAC 2 cut(s) 2082, 2238
BstX2I RGATCY 2 cut(s) 37, 925
BstYI RGATCY 2 cut(s) 37, 925
BstZ17I GTATAC 1 cut(s) 131
Bsu36I CCTNAGG 2 cut(s) 879, 1356
BsuI GTATCC 1 cut(s) 421
BsuRI GGCC 5 cut(s) 194, 231, 470, 728, 1138
BtsCI GGATG 7 cut(s) 13, 1070, 1552, 1669, 2077, 2233, 2438
BtsI GCAGTG 2 cut(s) 18, 1152
BtsIMutI CAGTG 9 cut(s) 18, 641, 1132, 1152, 1372, 1846, 2091, 2440, 2464
BveI ACCTGC 1 cut(s) 572
Cac8I GCNNGC 4 cut(s) 196, 378, 1325, 2438
CaiI CAGNNNCTG 1 cut(s) 17
CciI TCATGA 2 cut(s) 679, 835
Cfr10I RCCGGY 2 cut(s) 194, 728
Cfr13I GGNCC 3 cut(s) 468, 671, 1137
Csp6I GTAC 3 cut(s) 1266, 1825, 2156
CviQI GTAC 3 cut(s) 1266, 1825, 2156
DpnI GATC 8 cut(s) 39, 388, 927, 1950, 1981, 2097, 2223, 2351
DpnII GATC 8 cut(s) 37, 386, 925, 1948, 1979, 2095, 2221, 2349
EaeI YGGCCR 2 cut(s) 192, 726
Eam1104I CTCTTC 2 cut(s) 261, 1329
EarI CTCTTC 2 cut(s) 261, 1329
Eco105I TACGTA 1 cut(s) 1265
Eco130I CCWWGG 1 cut(s) 232
Eco24I GRGCYC 1 cut(s) 1456
Eco47I GGWCC 1 cut(s) 671
Eco57I CTGAAG 4 cut(s) 549, 665, 969, 1620
Eco81I CCTNAGG 2 cut(s) 879, 1356
EcoO109I RGGNCCY 1 cut(s) 671
EcoRI GAATTC 2 cut(s) 1488, 1986
EcoRII CCWGG 3 cut(s) 481, 610, 964
EcoT14I CCWWGG 1 cut(s) 232
EcoT22I ATGCAT 2 cut(s) 1170, 1228
EcoT38I GRGCYC 1 cut(s) 1456
ErhI CCWWGG 1 cut(s) 232
FaqI GGGAC 1 cut(s) 657
FauI CCCGC 1 cut(s) 363
FauNDI CATATG 1 cut(s) 1287
FblI GTMKAC 1 cut(s) 130
Fnu4HI GCNGC 6 cut(s) 229, 1299, 1461, 1464, 1481, 1728
FokI GGATG 7 cut(s) 20, 1057, 1539, 1676, 2084, 2240, 2445
FriOI GRGCYC 1 cut(s) 1456
Fsp4HI GCNGC 6 cut(s) 229, 1299, 1461, 1464, 1481, 1728
GluI GCNGC 6 cut(s) 229, 1299, 1461, 1464, 1481, 1728
GsaI CCCAGC 1 cut(s) 2253
HaeIII GGCC 5 cut(s) 194, 231, 470, 728, 1138
HapII CCGG 6 cut(s) 195, 432, 447, 729, 1033, 2321
Hin1I GRCGYC 1 cut(s) 874
HincII GTYRAC 1 cut(s) 1609
HindII GTYRAC 1 cut(s) 1609
HinfI GANTC 9 cut(s) 698, 734, 1442, 1832, 1874, 1925, 1993, 2006, 2300
HpaI GTTAAC 1 cut(s) 1609
HpaII CCGG 6 cut(s) 195, 432, 447, 729, 1033, 2321
HphI GGTGA 3 cut(s) 155, 743, 2335
Hpy166II GTNNAC 5 cut(s) 131, 404, 1311, 1609, 1864
Hpy8I GTNNAC 5 cut(s) 131, 404, 1311, 1609, 1864
HpyCH4III ACNGT 4 cut(s) 277, 290, 848, 1403
HpyCH4IV ACGT 4 cut(s) 525, 874, 1264, 2158
HpyF10VI GCNNNNNNNGC 6 cut(s) 50, 234, 346, 355, 970, 1460
HpySE526I ACGT 4 cut(s) 525, 874, 1264, 2158
Hsp92I GRCGYC 1 cut(s) 874
KflI GGGWCCC 1 cut(s) 671
Kpn2I TCCGGA 1 cut(s) 1032
KroI GCCGGC 1 cut(s) 194
KroNI GCCGGC 1 cut(s) 196
KspAI GTTAAC 1 cut(s) 1609
Kzo9I GATC 8 cut(s) 37, 386, 925, 1948, 1979, 2095, 2221, 2349
LguI GCTCTTC 1 cut(s) 261
LmnI GCTCC 1 cut(s) 2105
Lsp1109I GCAGC 4 cut(s) 1310, 1447, 1492, 1714
LweI GCATC 5 cut(s) 114, 1032, 1213, 1654, 2423
MaeII ACGT 4 cut(s) 525, 874, 1264, 2158
MaeIII GTNAC 6 cut(s) 25, 509, 689, 993, 1425, 1614
MalI GATC 8 cut(s) 39, 388, 927, 1950, 1981, 2097, 2223, 2351
MboI GATC 8 cut(s) 37, 386, 925, 1948, 1979, 2095, 2221, 2349
MflI RGATCY 2 cut(s) 37, 925
MhlI GDGCHC 1 cut(s) 1456
MlyI GAGTC 2 cut(s) 1436, 1934
MmeI TCCRAC 2 cut(s) 779, 1510
Mph1103I ATGCAT 2 cut(s) 1170, 1228
MroI TCCGGA 1 cut(s) 1032
MroNI GCCGGC 1 cut(s) 194
MseI TTAA 9 cut(s) 155, 204, 506, 633, 1011, 1608, 2036, 2268, 2283
MslI CAYNNNNRTG 2 cut(s) 112, 1173
MspCI CTTAAG 1 cut(s) 154
MspI CCGG 6 cut(s) 195, 432, 447, 729, 1033, 2321
MspR9I CCNGG 4 cut(s) 433, 483, 612, 966
Mva1269I GAATGC 4 cut(s) 119, 342, 775, 902
MvaI CCWGG 3 cut(s) 483, 612, 966
MvnI CGCG 1 cut(s) 2137
MwoI GCNNNNNNNGC 6 cut(s) 50, 234, 346, 355, 970, 1460
NaeI GCCGGC 1 cut(s) 196
NciI CCSGG 1 cut(s) 433
NdeI CATATG 1 cut(s) 1287
NdeII GATC 8 cut(s) 37, 386, 925, 1948, 1979, 2095, 2221, 2349
NgoMIV GCCGGC 1 cut(s) 194
NheI GCTAGC 1 cut(s) 376
NlaIV GGNNCC 6 cut(s) 39, 469, 672, 673, 1139, 2107
NmuCI GTSAC 3 cut(s) 25, 509, 689
NsiI ATGCAT 2 cut(s) 1170, 1228
NspI RCATGY 2 cut(s) 2091, 2358
PagI TCATGA 2 cut(s) 679, 835
PciI ACATGT 1 cut(s) 2354
PciSI GCTCTTC 1 cut(s) 261
PctI GAATGC 4 cut(s) 119, 342, 775, 902
PdiI GCCGGC 1 cut(s) 196
PfeI GAWTC 7 cut(s) 698, 734, 1832, 1874, 1993, 2006, 2300
PkrI GCNGC 6 cut(s) 230, 1300, 1462, 1465, 1482, 1729
PleI GAGTC 2 cut(s) 1436, 1933
PpsI GAGTC 2 cut(s) 1436, 1933
Ppu21I YACGTR 2 cut(s) 1265, 2159
PpuMI RGGWCCY 1 cut(s) 671
PscI ACATGT 1 cut(s) 2354
Psp5II RGGWCCY 1 cut(s) 671
Psp6I CCWGG 3 cut(s) 481, 610, 964
PspFI CCCAGC 1 cut(s) 2249
PspGI CCWGG 3 cut(s) 481, 610, 964
PspN4I GGNNCC 6 cut(s) 39, 469, 672, 673, 1139, 2107
PspPI GGNCC 3 cut(s) 468, 671, 1137
PspPPI RGGWCCY 1 cut(s) 671
PstI CTGCAG 2 cut(s) 421, 1482
PstNI CAGNNNCTG 1 cut(s) 17
PsuI RGATCY 2 cut(s) 37, 925
RsaI GTAC 3 cut(s) 1267, 1826, 2157
RsaNI GTAC 3 cut(s) 1266, 1825, 2156
RseI CAYNNNNRTG 2 cut(s) 112, 1173
SapI GCTCTTC 1 cut(s) 261
SaqAI TTAA 9 cut(s) 155, 204, 506, 633, 1011, 1608, 2036, 2268, 2283
SatI GCNGC 6 cut(s) 229, 1299, 1461, 1464, 1481, 1728
Sau3AI GATC 8 cut(s) 37, 386, 925, 1948, 1979, 2095, 2221, 2349
Sau96I GGNCC 3 cut(s) 468, 671, 1137
SchI GAGTC 2 cut(s) 1436, 1934
ScrFI CCNGG 4 cut(s) 433, 483, 612, 966
SduI GDGCHC 1 cut(s) 1456
SfaNI GCATC 5 cut(s) 114, 1032, 1213, 1654, 2423
SfcI CTRYAG 3 cut(s) 417, 1399, 1478
SinI GGWCC 1 cut(s) 671
SmiMI CAYNNNNRTG 2 cut(s) 112, 1173
SmlI CTYRAG 2 cut(s) 154, 1046
SmoI CTYRAG 2 cut(s) 154, 1046
SnaBI TACGTA 1 cut(s) 1265
SsiI CCGC 4 cut(s) 228, 356, 1464, 2137
SspI AATATT 2 cut(s) 868, 2132
StyD4I CCNGG 4 cut(s) 431, 481, 610, 964
StyI CCWWGG 1 cut(s) 232
TaaI ACNGT 4 cut(s) 277, 290, 848, 1403
TaiI ACGT 4 cut(s) 528, 877, 1267, 2161
TaqI TCGA 3 cut(s) 1928, 1973, 2098
TauI GCSGC 2 cut(s) 231, 1466
TfiI GAWTC 7 cut(s) 698, 734, 1832, 1874, 1993, 2006, 2300
Tru1I TTAA 9 cut(s) 155, 204, 506, 633, 1011, 1608, 2036, 2268, 2283
Tru9I TTAA 9 cut(s) 155, 204, 506, 633, 1011, 1608, 2036, 2268, 2283
TscAI CASTG 8 cut(s) 18, 648, 1139, 1159, 1372, 1846, 2098, 2447
TseFI GTSAC 3 cut(s) 25, 509, 689
TseI GCWGC 4 cut(s) 1298, 1460, 1480, 1727
Tsp45I GTSAC 3 cut(s) 25, 509, 689
TspRI CASTG 8 cut(s) 18, 648, 1139, 1159, 1372, 1846, 2098, 2447
Vha464I CTTAAG 1 cut(s) 154
VpaK11BI GGWCC 1 cut(s) 671
XapI RAATTY 5 cut(s) 1488, 1501, 1587, 1732, 1986
XbaI TCTAGA 3 cut(s) 605, 701, 2009
XceI RCATGY 2 cut(s) 2091, 2358
XcmI CCANNNNNNNNNTGG 1 cut(s) 1285
XmaJI CCTAGG 1 cut(s) 232
XmiI GTMKAC 1 cut(s) 130
ZraI GACGTC 1 cut(s) 875
Zsp2I ATGCAT 2 cut(s) 1170, 1228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.