Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0011834

Physical Location & Seq

Genomic Coordinates Forward (+)

15650180 .. 15655564

Gene Structure 5385 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

ATGTTCCCAGCAATGGCATCCATTGACATTCTCAATCCACCCAGAATTTGCATTCCCAAACCCCACACCCACTTCAAATCCCCAGCTCACTCGAAGCGTTTTGGTTTGGTTCGGAAACTTCAACCGCAGCTGCCTCTCCGCAGCGGGTCACTCACCCTCCTCTGCCAAACGTCTTCCGGGCCGTCGTCAAGGTCCGGTGACAATAGCAAAACCCCCCAGGACGATTTTGTGGCCAGGGTTTTGAAGGAGAACCCTAGCCAGATTGAACCCAGGTACTTGGTTGGCGACAAGTTCTATACTTTGAAGGAAAAAGAGAGTTTGGGGAAGAATTCCAATGTGGGTTTTGTTGAACTCTTGGCGAAACGGCTGAATTTTTCGAAGCTGAAAAATGAAAGAATTGAGGGACAGAGTGATGGTGGAGTGAAGGATGATGCTGTGTATTTAAAGGACATTTTGAGGGAGTATAAGGGGAAGCTCTATGTGCCTGAGCAGATTTTCGGGACGGAGTTGCCGGAGGAAGAGCAATTTGAGAAGAGTTTGGAGGAATTGCCCAGAATGAGCTATGAGGATTTTCTTAAAGCTGTGAAGAGTGAAAAGGTTAAGCTCTTGATTTCCAAGGAAGTTGCAGGGACTTCTTATGGGGTCAGTGATTACATTGTTGATTTGAAGGAGATACCCGGCCAAAAGAGCTTGCATCGAACCAAATGGGCAATGAGGCTGGATGAGGGTGAAGCTCAAGCTCTTTTGGAGGATTACACAGGCCCGAGATATGTGATTGAGGGGCACACTACGTCTTGGGTTGGAAAGGTACCACAGTACCCTCATCCGGTGGCATCTTCCATATCTAGCAGAATGATGGTGGAGCTTGGAATGGTAACAGCTGTAATGGCTGCTGCAGCAGTTTTTATTGGAGGATTCCTGGCTTCTGCAGTATTTGCTGTTACCAGCTTCGTTTTTGCGTCAACTGTATATGTCATATGGCCTATAGTCAAACCATTTACGAGACTTTTTTTTGGTCTCGTCTTGGGTATTTTGGAGAGAGTATGGGATAACCTTGTTGACTTTTTCAGTGATGGAGGCATTTTCTCTAAATTTTCTGAATTTTACACTTTTGGTGGTCTATCTGCCAGCATTGAGATGTTAAAACCAATAACGATTGTCCTTATGACCATGGTCATTCTTGTCCGTTTCACACTTTCAAGAAGACCTAAGAACTTCCGGAAGTGGGATCTGTGGCAAGGGATTGATTTTTCACGATCCAAAGCAGAAGCCCGTGTTGATGGGTCAACTGGAGTTAAGTTTAGTGATGTGGCAGGGATTGATGAAGCAGTAGAGGAACTTCTGGAGTTGGTGAGGTACTTGAAGAACCCAGAACTATTTGACAAAATGGGAATAAAACCTCCGCATGGGGTTCTTTTAGAGGGTCCTCCTGGATGTGGCAAGACCCTGGTTGCAAAGGCCATAGCTGGTGAGGCTGGTGTTCCGTTTTACCAAATGGCTGGATCTGAATTTGTTGAAGTCTTAGTTGGTGTTGGTTCAGCTCGTATTAGGGATCTATTCAAAAGAGCCAAGGTAAACAAACCATCTGTTATTTTCATTGATGAGATTGATGCATTGGCTACGAGGCGTCAGGGAATTTTCAAGGAAACTAGCGACCACCTGTATAATGCAGCCACTCAAGAGAGAGAAACTACTCTGAATCAGCTCTTAATAGAGCTTGATGGATTTGACACTGGTAAAGGTGTAATATTCTTAGCTGCTACAAATCGCCGGGATTTATTAGACCCTGCACTTCTTCGACCAGGTCGTTTTGATCGGAAGATAAAAATTCGTCCTCCTGCTGCAAAGGGGAGATTGGATATTTTGAAAATCCATGCAAGCAAAGTGAAAATGTCACCATCTGTTGATTTGTCCAGCTATGCACAGAACTTACCAGGATGGACGGGAGCAAAGTTGGCTCAGCTGGTCCAAGAGGCTGCACTTGTCGCGGTGAGGAAGGGGCATGATTCAATTTTTCAGACAGACTTGGATGATGCTGTTGATAGACTCACTGTAGGACCAAAGCGGATTGGTATAGAGTTGGGCCATCTGGGTCAATGTCGTCGAGCCACTACTGGAGTTGGAGTGGCAATGACTTCTCATCTGCTTAGGCAATACGAAAACGCAGAAGTTGAACGGATTGATCGCATTTCAATCATCCCTCGTGGTCAGACATTGTCACAAGTTGTATTTCATCGACTTGATGACGAATCATACATGTTTGAGCGCCGGCCACAATTGCTGCATCGCCTTCAGGTTTTACTTGGTGGAAGGGCCGCTGAAGAGGTCATATATGGACGAGACACATCAAGGGCATCGGTTGACTACCTTGCTGATGCATCTTGGCTTGCTCGTAAAATTTTAACCATTTGGAATTTGGAGAATCCGATGGTCATACATGGAGAGCCACCACCTTGGAGGAAGAAACTTGAATTTGTAGGCCCTCGACTGGACTTCGAGGGATCACTATACCACGACTATGACCTGATTGAACCACCAGTGAACTTCAATTTGGATGATGATGTTGCAAAAAGGGCGGAAGAGCTGATACACAAAATGTATGACAAAACACTTTCTCTGCTTAAGAAGCATCACACAGCCTTGCTTAAAACTGTGAAGGTTCTTCTTGAACGCAAGGAAATTAGCGGTGAAGAAATTGATTTTATCTTGAACAAGTACCCTCCACAAACACCCTTAAAGCTTCTTTTAGGAGAGGAAAATCCTGGCAGCCTTAAGTTTGTCACACAAGAACAGGAACAGGAACAGGAACGCAAGTCAGAGTACGCCCTTCTATCTCAATCCAATGGAGAAACCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010020 GO:0010154 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0042170 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

953

Amino Acids

106.85

Weight (kDa)

8.23

Isoelectric Point (pI)

37.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	471 - 611	1.8e-39	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	634 - 677	1.6e-07	AAA+ lid domain
Peptidase_M41	PF01434	721 - 806	3.5e-12	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011834)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23940
fragaria_vesca	FvH4_5g04870 FvH4_5g04870
malus_domestica	MD06G1109500.v1.1 MD14G1130500.v1.1
prunus_persica	Prupe.5G122500_v2.0.a1
pyrus_communis	pycom06g10310
rosa_chinensis	RchiOBHm_Chr7g0194221
rosa_laevigata	RLG00000004209
rosa_multiflora	Rmu_co8268851.1_g000001 Rmu_sc0000901.1_g000001 Rmu_sc0009433.1_g000015
rosa_roxburghii	Rroxscaffold_3G00261490
rosa_rugosa	Rorug07G0014400
rosa_samantha	Rh7AG141800 Rh7BG142200 Rh7CG145900 Rh7DG143200
rosa_wichuraiana	Rw7G012120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	808
AccB1I	GGYRCC	1 cut(s)	808
AccII	CGCG	1 cut(s)	1988
AccIII	TCCGGA	1 cut(s)	1218
AciI	CCGC	9 cut(s)	125, 139, 144, 1403, 1988, 2065, 2316, 2576, 2685
AclWI	GGATC	5 cut(s)	1236, 1251, 1510, 1560, 2509
AcoI	YGGCCR	3 cut(s)	231, 679, 2270
AcuI	CTGAAG	2 cut(s)	2276, 2340
AcyI	GRCGYC	1 cut(s)	1627
AfaI	GTAC	6 cut(s)	275, 810, 818, 1358, 2717, 2822
AfiI	CCNNNNNNNGG	6 cut(s)	13, 826, 1225, 1406, 1436, 2488
AflII	CTTAAG	2 cut(s)	2621, 2771
AflIII	ACRYGT	1 cut(s)	2256
AjnI	CCWGG	9 cut(s)	216, 233, 269, 918, 1429, 1446, 1801, 1933, 2761
AjuI	GAANNNNNNNTTGG	4 cut(s)	1509, 1541, 2534, 2566
Alw26I	GTCTC	3 cut(s)	997, 1022, 2334
AlwI	GGATC	5 cut(s)	1236, 1251, 1510, 1560, 2509
Ama87I	CYCGRG	1 cut(s)	763
Aor13HI	TCCGGA	1 cut(s)	1218
Asp718I	GGTACC	1 cut(s)	808
AspLEI	GCGC	1 cut(s)	2268
AspS9I	GGNCC	9 cut(s)	179, 192, 761, 1424, 1966, 2057, 2083, 2313, 2480
AsuC2I	CCSGG	3 cut(s)	178, 678, 1772
AsuHPI	GGTGA	8 cut(s)	145, 209, 740, 1363, 1481, 1887, 2002, 2699
AsuII	TTCGAA	1 cut(s)	377
AvaI	CYCGRG	1 cut(s)	763
AvaII	GGWCC	4 cut(s)	192, 1424, 1966, 2057
BaeGI	GKGCMC	1 cut(s)	786
BaeI	ACNNNNGTAYC	4 cut(s)	800, 800, 833, 833
BalI	TGGCCA	1 cut(s)	233
BanI	GGYRCC	1 cut(s)	808
BarI	GAAGNNNNNNTAC	4 cut(s)	1323, 1355, 2571, 2603
BauI	CACGAG	1 cut(s)	2202
BbsI	GAAGAC	2 cut(s)	165, 1210
BceAI	ACGGC	2 cut(s)	166, 380
BciT130I	CCWGG	9 cut(s)	218, 235, 271, 920, 1431, 1448, 1803, 1935, 2763
BcnI	CCSGG	3 cut(s)	178, 678, 1772
BcoDI	GTCTC	3 cut(s)	997, 1022, 2334
BfaI	CTAG	3 cut(s)	255, 846, 1650
BfmI	CTRYAG	4 cut(s)	894, 927, 984, 2052
BfoI	RGCGCY	1 cut(s)	2269
BfrI	CTTAAG	2 cut(s)	2621, 2771
BlpI	GCTNAGC	1 cut(s)	1959
Bme18I	GGWCC	4 cut(s)	192, 1424, 1966, 2057
BmeT110I	CYCGRG	1 cut(s)	763
BmgT120I	GGNCC	9 cut(s)	179, 192, 761, 1424, 1966, 2057, 2083, 2313, 2480
BmiI	GGNNCC	2 cut(s)	810, 1425
BoxI	GACNNNNGTC	1 cut(s)	1172
BpiI	GAAGAC	2 cut(s)	165, 1210
BpmI	CTGGAG	3 cut(s)	1311, 1364, 2136
Bpu10I	CCTNAGC	2 cut(s)	486, 2147
Bpu1102I	GCTNAGC	1 cut(s)	1959
Bpu14I	TTCGAA	1 cut(s)	377
BpuEI	CTTGAG	2 cut(s)	720, 1662
BpuMI	CCSGG	3 cut(s)	178, 678, 1772
BsaHI	GRCGYC	1 cut(s)	1627
BsaI	GGTCTC	1 cut(s)	1022
BsaJI	CCNNGG	8 cut(s)	216, 234, 269, 615, 1170, 1446, 1569, 2453
BsaWI	WCCGGW	3 cut(s)	194, 826, 1218
BsaXI	ACNNNNNCTCC	4 cut(s)	141, 171, 2109, 2139
Bsc4I	CCNNNNNNNGG	6 cut(s)	13, 826, 1225, 1406, 1436, 2488
Bse118I	RCCGGY	1 cut(s)	2268
Bse1I	ACTGG	5 cut(s)	1294, 1738, 2119, 2493, 2537
Bse3DI	GCAATG	3 cut(s)	18, 717, 2136
BseAI	TCCGGA	1 cut(s)	1218
BseBI	CCWGG	9 cut(s)	218, 235, 271, 920, 1431, 1448, 1803, 1935, 2763
BseDI	CCNNGG	8 cut(s)	216, 234, 269, 615, 1170, 1446, 1569, 2453
BseGI	GGATG	9 cut(s)	17, 433, 727, 823, 1439, 1943, 2035, 2196, 2560
BseLI	CCNNNNNNNGG	6 cut(s)	13, 826, 1225, 1406, 1436, 2488
BseMI	GCAATG	3 cut(s)	18, 717, 2136
BseMII	CTCAG	2 cut(s)	477, 1973
BseNI	ACTGG	5 cut(s)	1294, 1738, 2119, 2493, 2537
BseRI	GAGGAG	1 cut(s)	149
BseSI	GKGCMC	1 cut(s)	786
BseYI	CCCAGC	2 cut(s)	7, 82
BsgI	GTGCAG	2 cut(s)	1773, 1962
Bsh1236I	CGCG	1 cut(s)	1988
BshNI	GGYRCC	1 cut(s)	808
BsiHKCI	CYCGRG	1 cut(s)	763
BsiSI	CCGG	8 cut(s)	177, 195, 512, 678, 827, 1219, 1771, 2269
BslFI	GGGAC	3 cut(s)	417, 514, 643
BslI	CCNNNNNNNGG	6 cut(s)	13, 826, 1225, 1406, 1436, 2488
BsmAI	GTCTC	3 cut(s)	997, 1022, 2334
BsmFI	GGGAC	3 cut(s)	417, 514, 643
BsmI	GAATGC	1 cut(s)	51
Bso31I	GGTCTC	1 cut(s)	1022
BsoBI	CYCGRG	1 cut(s)	763
Bsp119I	TTCGAA	1 cut(s)	377
Bsp1286I	GDGCHC	1 cut(s)	786
Bsp13I	TCCGGA	1 cut(s)	1218
Bsp143I	GATC	7 cut(s)	1228, 1256, 1502, 1552, 1813, 2182, 2501
Bsp1720I	GCTNAGC	1 cut(s)	1959
Bsp19I	CCATGG	1 cut(s)	1170
BspACI	CCGC	9 cut(s)	125, 139, 144, 1403, 1988, 2065, 2316, 2576, 2685
BspCNI	CTCAG	2 cut(s)	478, 1972
BspEI	TCCGGA	1 cut(s)	1218
BspFNI	CGCG	1 cut(s)	1988
BspLI	GGNNCC	2 cut(s)	810, 1425
BspMAI	CTGCAG	2 cut(s)	898, 931
BspPI	GGATC	5 cut(s)	1236, 1251, 1510, 1560, 2509
BspQI	GCTCTTC	2 cut(s)	513, 2574
BspT104I	TTCGAA	1 cut(s)	377
BspT107I	GGYRCC	1 cut(s)	808
BspTI	CTTAAG	2 cut(s)	2621, 2771
BspTNI	GGTCTC	1 cut(s)	1022
BsrDI	GCAATG	3 cut(s)	18, 717, 2136
BsrFI	RCCGGY	1 cut(s)	2268
BsrI	ACTGG	5 cut(s)	1294, 1738, 2119, 2493, 2537
BssAI	RCCGGY	1 cut(s)	2268
BssECI	CCNNGG	8 cut(s)	216, 234, 269, 615, 1170, 1446, 1569, 2453
BssMI	GATC	7 cut(s)	1228, 1256, 1502, 1552, 1813, 2182, 2501
BssNI	GRCGYC	1 cut(s)	1627
BssSI	CACGAG	1 cut(s)	2202
BssT1I	CCWWGG	4 cut(s)	615, 1170, 1569, 2453
Bst2BI	CACGAG	1 cut(s)	2202
Bst2UI	CCWGG	9 cut(s)	218, 235, 271, 920, 1431, 1448, 1803, 1935, 2763
Bst4CI	ACNGT	4 cut(s)	816, 967, 2053, 2653
Bst6I	CTCTTC	5 cut(s)	513, 527, 581, 2316, 2574
BstACI	GRCGYC	1 cut(s)	1627
BstAFI	CTTAAG	2 cut(s)	2621, 2771
BstAPI	GCANNNNNTGC	1 cut(s)	935
BstBI	TTCGAA	1 cut(s)	377
BstC8I	GCNNGC	5 cut(s)	692, 1129, 1879, 2270, 2388
BstDEI	CTNAG	6 cut(s)	486, 1209, 1522, 1753, 1959, 2147
BstDSI	CCRYGG	1 cut(s)	1170
BstF5I	GGATG	9 cut(s)	17, 433, 727, 823, 1439, 1943, 2035, 2196, 2560
BstFNI	CGCG	1 cut(s)	1988
BstH2I	RGCGCY	1 cut(s)	2269
BstHHI	GCGC	1 cut(s)	2268
BstKTI	GATC	7 cut(s)	1231, 1259, 1505, 1555, 1816, 2185, 2504
BstMAI	GTCTC	3 cut(s)	997, 1022, 2334
BstMBI	GATC	7 cut(s)	1228, 1256, 1502, 1552, 1813, 2182, 2501
BstNI	CCWGG	9 cut(s)	218, 235, 271, 920, 1431, 1448, 1803, 1935, 2763
BstNSI	RCATGY	1 cut(s)	2260
BstPAI	GACNNNNGTC	1 cut(s)	1172
BstSFI	CTRYAG	4 cut(s)	894, 927, 984, 2052
BstSLI	GKGCMC	1 cut(s)	786
BstUI	CGCG	1 cut(s)	1988
BstV2I	GAAGAC	2 cut(s)	165, 1210
BstX2I	RGATCY	3 cut(s)	1228, 1502, 1552
BstXI	CCANNNNNNTGG	3 cut(s)	277, 1499, 2454
BstYI	RGATCY	3 cut(s)	1228, 1502, 1552
BtgI	CCRYGG	1 cut(s)	1170
BtgZI	GCGATG	1 cut(s)	2270
BtsCI	GGATG	9 cut(s)	17, 433, 727, 823, 1439, 1943, 2035, 2196, 2560
BtsIMutI	CAGTG	5 cut(s)	652, 1075, 1731, 2049, 2544
Cac8I	GCNNGC	5 cut(s)	692, 1129, 1879, 2270, 2388
CfoI	GCGC	1 cut(s)	2268
Cfr10I	RCCGGY	1 cut(s)	2268
Cfr13I	GGNCC	9 cut(s)	179, 192, 761, 1424, 1966, 2057, 2083, 2313, 2480
CseI	GACGC	2 cut(s)	948, 1616
CsiI	ACCWGGT	1 cut(s)	1801
Csp6I	GTAC	6 cut(s)	274, 809, 817, 1357, 2716, 2821
CviAII	CATG	6 cut(s)	1171, 1406, 1874, 2003, 2257, 2438
CviQI	GTAC	6 cut(s)	274, 809, 817, 1357, 2716, 2821
DdeI	CTNAG	6 cut(s)	486, 1209, 1522, 1753, 1959, 2147
DpnI	GATC	7 cut(s)	1230, 1258, 1504, 1554, 1815, 2184, 2503
DpnII	GATC	7 cut(s)	1228, 1256, 1502, 1552, 1813, 2182, 2501
DraI	TTTAAA	1 cut(s)	444
EaeI	YGGCCR	3 cut(s)	231, 679, 2270
Eam1104I	CTCTTC	5 cut(s)	513, 527, 581, 2316, 2574
EarI	CTCTTC	5 cut(s)	513, 527, 581, 2316, 2574
EciI	GGCGGA	1 cut(s)	2591
Eco130I	CCWWGG	4 cut(s)	615, 1170, 1569, 2453
Eco31I	GGTCTC	1 cut(s)	1022
Eco47I	GGWCC	4 cut(s)	192, 1424, 1966, 2057
Eco57I	CTGAAG	2 cut(s)	2276, 2340
Eco88I	CYCGRG	1 cut(s)	763
EcoO109I	RGGNCCY	2 cut(s)	1424, 2480
EcoRI	GAATTC	1 cut(s)	328
EcoRII	CCWGG	9 cut(s)	216, 233, 269, 918, 1429, 1446, 1801, 1933, 2761
EcoT14I	CCWWGG	4 cut(s)	615, 1170, 1569, 2453
EcoT22I	ATGCAT	2 cut(s)	1615, 2380
ErhI	CCWWGG	4 cut(s)	615, 1170, 1569, 2453
FaeI	CATG	6 cut(s)	1174, 1409, 1877, 2006, 2260, 2441
FaqI	GGGAC	3 cut(s)	417, 514, 643
FatI	CATG	6 cut(s)	1170, 1405, 1873, 2002, 2256, 2437
FauI	CCCGC	1 cut(s)	137
FauNDI	CATATG	1 cut(s)	977
FokI	GGATG	9 cut(s)	4, 440, 734, 810, 1446, 1950, 2042, 2183, 2567
FspBI	CTAG	3 cut(s)	255, 846, 1650
GlaI	GCGC	1 cut(s)	2267
GsaI	CCCAGC	2 cut(s)	11, 86
GsuI	CTGGAG	3 cut(s)	1311, 1364, 2136
HaeII	RGCGCY	1 cut(s)	2269
HapII	CCGG	8 cut(s)	177, 195, 512, 678, 827, 1219, 1771, 2269
HgaI	GACGC	2 cut(s)	948, 1616
HhaI	GCGC	1 cut(s)	2268
Hin1I	GRCGYC	1 cut(s)	1627
Hin1II	CATG	6 cut(s)	1174, 1409, 1877, 2006, 2260, 2441
Hin6I	GCGC	1 cut(s)	2266
HinP1I	GCGC	1 cut(s)	2266
HincII	GTYRAC	4 cut(s)	963, 1060, 1287, 2362
HindII	GTYRAC	4 cut(s)	963, 1060, 1287, 2362
HindIII	AAGCTT	1 cut(s)	2738
HinfI	GANTC	6 cut(s)	915, 1699, 2006, 2046, 2249, 2422
HpaII	CCGG	8 cut(s)	177, 195, 512, 678, 827, 1219, 1771, 2269
HphI	GGTGA	8 cut(s)	145, 209, 740, 1363, 1481, 1887, 2002, 2699
Hpy166II	GTNNAC	6 cut(s)	963, 1060, 1287, 1576, 2362, 2542
Hpy188I	TCNGA	9 cut(s)	114, 1099, 1507, 1698, 1818, 2019, 2211, 2427, 2818
Hpy188III	TCNNGA	9 cut(s)	499, 607, 1200, 1219, 1254, 1343, 1679, 2666, 2707
Hpy8I	GTNNAC	6 cut(s)	963, 1060, 1287, 1576, 2362, 2542
Hpy99I	CGWCG	2 cut(s)	187, 2106
HpyAV	CCTTC	9 cut(s)	238, 298, 418, 661, 1990, 2300, 2304, 2650, 2837
HpyCH4III	ACNGT	4 cut(s)	816, 967, 2053, 2653
HpyCH4IV	ACGT	2 cut(s)	170, 791
HpyF3I	CTNAG	6 cut(s)	486, 1209, 1522, 1753, 1959, 2147
HpySE526I	ACGT	2 cut(s)	170, 791
Hsp92I	GRCGYC	1 cut(s)	1627
Hsp92II	CATG	6 cut(s)	1174, 1409, 1877, 2006, 2260, 2441
HspAI	GCGC	1 cut(s)	2266
Kpn2I	TCCGGA	1 cut(s)	1218
KpnI	GGTACC	1 cut(s)	812
KroI	GCCGGC	1 cut(s)	2268
KroNI	GCCGGC	1 cut(s)	2270
Kzo9I	GATC	7 cut(s)	1228, 1256, 1502, 1552, 1813, 2182, 2501
LguI	GCTCTTC	2 cut(s)	513, 2574
LmnI	GCTCC	2 cut(s)	862, 1946
MabI	ACCWGGT	1 cut(s)	1801
MaeI	CTAG	3 cut(s)	255, 846, 1650
MaeII	ACGT	2 cut(s)	170, 791
MaeIII	GTNAC	7 cut(s)	147, 197, 874, 940, 1893, 2217, 2779
MalI	GATC	7 cut(s)	1230, 1258, 1504, 1554, 1815, 2184, 2503
MboI	GATC	7 cut(s)	1228, 1256, 1502, 1552, 1813, 2182, 2501
MfeI	CAATTG	1 cut(s)	2276
MflI	RGATCY	3 cut(s)	1228, 1502, 1552
MhlI	GDGCHC	1 cut(s)	786
MlsI	TGGCCA	1 cut(s)	233
MluNI	TGGCCA	1 cut(s)	233
MlyI	GAGTC	1 cut(s)	2040
MmeI	TCCRAC	2 cut(s)	781, 2101
Mox20I	TGGCCA	1 cut(s)	233
Mph1103I	ATGCAT	2 cut(s)	1615, 2380
MroI	TCCGGA	1 cut(s)	1218
MroNI	GCCGGC	1 cut(s)	2268
MscI	TGGCCA	1 cut(s)	233
MslI	CAYNNNNRTG	2 cut(s)	1136, 2517
Msp20I	TGGCCA	1 cut(s)	233
MspA1I	CMGCKG	5 cut(s)	130, 144, 881, 1963, 2318
MspCI	CTTAAG	2 cut(s)	2621, 2771
MspI	CCGG	8 cut(s)	177, 195, 512, 678, 827, 1219, 1771, 2269
MunI	CAATTG	1 cut(s)	2276
Mva1269I	GAATGC	1 cut(s)	51
MvaI	CCWGG	9 cut(s)	218, 235, 271, 920, 1431, 1448, 1803, 1935, 2763
MvnI	CGCG	1 cut(s)	1988
NaeI	GCCGGC	1 cut(s)	2270
NciI	CCSGG	3 cut(s)	178, 678, 1772
NcoI	CCATGG	1 cut(s)	1170
NdeI	CATATG	1 cut(s)	977
NdeII	GATC	7 cut(s)	1228, 1256, 1502, 1552, 1813, 2182, 2501
NgoMIV	GCCGGC	1 cut(s)	2268
NlaIII	CATG	6 cut(s)	1174, 1409, 1877, 2006, 2260, 2441
NlaIV	GGNNCC	2 cut(s)	810, 1425
NmuCI	GTSAC	5 cut(s)	147, 197, 1893, 2217, 2779
NsiI	ATGCAT	2 cut(s)	1615, 2380
NspI	RCATGY	1 cut(s)	2260
NspV	TTCGAA	1 cut(s)	377
PciI	ACATGT	1 cut(s)	2256
PciSI	GCTCTTC	2 cut(s)	513, 2574
PcsI	WCGNNNNNNNCGW	1 cut(s)	1804
PctI	GAATGC	1 cut(s)	51
PdiI	GCCGGC	1 cut(s)	2270
PfeI	GAWTC	5 cut(s)	915, 1699, 2006, 2249, 2422
PflFI	GACNNNGTC	2 cut(s)	1803, 2215
PfoI	TCCNGGA	1 cut(s)	1429
PleI	GAGTC	1 cut(s)	2040
PpsI	GAGTC	1 cut(s)	2040
PpuMI	RGGWCCY	1 cut(s)	1424
PscI	ACATGT	1 cut(s)	2256
PshAI	GACNNNNGTC	1 cut(s)	1172
Psp5II	RGGWCCY	1 cut(s)	1424
Psp6I	CCWGG	9 cut(s)	216, 233, 269, 918, 1429, 1446, 1801, 1933, 2761
PspFI	CCCAGC	2 cut(s)	7, 82
PspGI	CCWGG	9 cut(s)	216, 233, 269, 918, 1429, 1446, 1801, 1933, 2761
PspN4I	GGNNCC	2 cut(s)	810, 1425
PspPI	GGNCC	9 cut(s)	179, 192, 761, 1424, 1966, 2057, 2083, 2313, 2480
PspPPI	RGGWCCY	1 cut(s)	1424
PstI	CTGCAG	2 cut(s)	898, 931
PsuI	RGATCY	3 cut(s)	1228, 1502, 1552
PsyI	GACNNNGTC	2 cut(s)	1803, 2215
PvuII	CAGCTG	3 cut(s)	130, 881, 1963
RsaI	GTAC	6 cut(s)	275, 810, 818, 1358, 2717, 2822
RsaNI	GTAC	6 cut(s)	274, 809, 817, 1357, 2716, 2821
RseI	CAYNNNNRTG	2 cut(s)	1136, 2517
SapI	GCTCTTC	2 cut(s)	513, 2574
Sau3AI	GATC	7 cut(s)	1228, 1256, 1502, 1552, 1813, 2182, 2501
Sau96I	GGNCC	9 cut(s)	179, 192, 761, 1424, 1966, 2057, 2083, 2313, 2480
SchI	GAGTC	1 cut(s)	2040
SduI	GDGCHC	1 cut(s)	786
SexAI	ACCWGGT	1 cut(s)	1801
SfcI	CTRYAG	4 cut(s)	894, 927, 984, 2052
SfuI	TTCGAA	1 cut(s)	377
SinI	GGWCC	4 cut(s)	192, 1424, 1966, 2057
SmiMI	CAYNNNNRTG	2 cut(s)	1136, 2517
SmlI	CTYRAG	4 cut(s)	735, 1677, 2621, 2771
SmoI	CTYRAG	4 cut(s)	735, 1677, 2621, 2771
SsiI	CCGC	9 cut(s)	125, 139, 144, 1403, 1988, 2065, 2316, 2576, 2685
SspI	AATATT	1 cut(s)	1749
SspMI	CTAG	3 cut(s)	255, 846, 1650
StyI	CCWWGG	4 cut(s)	615, 1170, 1569, 2453
TaaI	ACNGT	4 cut(s)	816, 967, 2053, 2653
TaiI	ACGT	2 cut(s)	173, 794
TaqI	TCGA	8 cut(s)	92, 377, 697, 1798, 2104, 2236, 2485, 2496
TauI	GCSGC	1 cut(s)	2318
TfiI	GAWTC	5 cut(s)	915, 1699, 2006, 2249, 2422
TscAI	CASTG	5 cut(s)	652, 1075, 1738, 2056, 2544
TseFI	GTSAC	5 cut(s)	147, 197, 1893, 2217, 2779
Tsp45I	GTSAC	5 cut(s)	147, 197, 1893, 2217, 2779
TspDTI	ATGAA	4 cut(s)	405, 1338, 1585, 2222
TspGWI	ACGGA	4 cut(s)	518, 1175, 1473, 2191
TspRI	CASTG	5 cut(s)	652, 1075, 1738, 2056, 2544
Tth111I	GACNNNGTC	2 cut(s)	1803, 2215
Vha464I	CTTAAG	2 cut(s)	2621, 2771
VpaK11BI	GGWCC	4 cut(s)	192, 1424, 1966, 2057
XceI	RCATGY	1 cut(s)	2260
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2413
XspI	CTAG	3 cut(s)	255, 846, 1650
Zsp2I	ATGCAT	2 cut(s)	1615, 2380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.