Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0008594

Physical Location & Seq

Genomic Coordinates Reverse (-)

16815638 .. 16819354

Gene Structure 3717 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGGCGGAGCTGTCGATGGAATCGCTGCCGTTGGGGTTCCGGTTCAGGCCCACGGACGAGGAGCTCATCAACCACTACCTGCGGCTGAAGATCAACGGCCGTGATTCAGAGGTCCGAGTCATCCCGGAAATCGACGTTTGCAGATGGGAGCCTTGGGATTTGCCAAAATTATCAGTGATAAAGTCAGATGATCAAGAGTGGTTCTTCTTTTGCCCCCGGGATAGGAAGTACCCAAATGGCCATCGGTCAAATAGAGCCACTGATGCTGGATACTGGAAGGCCACAGGGAAGGACCGGACCATAAAGTCCCGTCAGTGCAAGTCTGCCTCTAACAGCAATGGCCAAGTTGGGATGAAGAAGACGTTGGTTTTCCACAGAGGTCGCGCCCCTAAGGGGGAGCGCACCAGCTGGATCATGCACGAGTATCGTGCCACTCAAAAGGAACTCGATGGCACTGGTCCGGGCCAGGGTGCCTTTGTTCTCTGTCGCTTGTTCCATAAACCAGAAGAGAAGGCTGATGTACCAAAGTATGACGAAGTTGAACAAACTGGTTTATCTCCTACCCCAACTAAGTCATCTCCTGATGAGTCCTCAGATATAATTCAGGAAACAGCTACATCGGAGATCCAAGGTGAAAATCAGGCGGAAGGTATCATGAGGTGGTTGACTGATAATTCTGACAACGTGACCCCTGATGCTCTCCCACCGCTACCTGACATTTTTATGGCCTCTGATGTGGAAGATCAAGGAGCAGTAGAAACAGGGATCCAGGGCCATCTGACAATGGAAGAAAATCCTGCATTCTATGAGTCTTTGGGCGGCCCGATTGATTGCAAAGTATTCTCACCGTTGCATTCGCAGATTAATGCAGAGCTGGAACATTTTATGGGTTCACCTTTTACCAGTGACTTTGGCAATTATGATAATGGATTGCATTTTCAGGACGGCACATGTGAACTGGATGTATCCCTCACAGAGTTGTTGGATGAGTTCGGCAATAGCCATTATGAGAGCTCTTGTGAGGAGTCAACAAGTCAGAAGAACTTGGTCGTAGGAAATGAGACCTATTTATCTGGTAATGCGTGCACCGCGCCGCCAGTGAACTCGTGTTTCAATGGTGCATGGGATAACACGGACACCAATATCACCCAGCATGATCTGCAAAAGATGGCATTTGGCTTGTACAATGAGCAATTTGGTTCCGAGGATCTGCAGAACACCTCATTTGGTTATTGGCAAGCTGAAGCCCAAGCATCGCTTGATGACCAAAAACCTAGAATGGGAAAGATGGCGGACAGTTATTTATCTGAATGCTCAGTGGCTGAGCAATTTCCTGTGAGTTCAGTCAATGATGGTTTGGATGATTCGACAAGTTGGAATCATGGTGTTGACCATGTTGGTGGAACTGGAATCAAGATTAGGGCTCGTGGTCCTCAACTACAACCAAATACAGATAACTTTGTATATCAGGGCACTGCTGCAAGAAGACTTCGTTTATCAGTGGACCGTTCATCTGGGTCAATTACCAATGGCAATGAGAGCGATGAAAACTACAGCAGGGAAGATGATGAAGTCCAATCAACTATTACACAGCCTAGAGAGGATATAGGGCAGAGTCCTACTTCTGATGAACAGGAGGAAGAGCATGCAATATTCAACGACAAAGAAGAATTATCCAGCAGGAATAATTCTATTAACCATGGTTGTGATCCTGATGGTAGAAGTAGAATCAAGATTAGGACTCGGCAGCCTCAACAACGATCAAATTCAGACAGTTCAGTAACTCAGGGCACTGCTCCTAGGAGGATCCGTTTGCAGATGAATATTTCATCTGGGTCCATTGCTGATAGTAATGTGAGAGACACAGATGACGGGGGAGAAGATGAAGTACAATCAACTAATACTGAGGCTAGAGAAGCAATACAGCAGAGTCTGACCTCAGATGAACAGGAGAAAGGGCATGCAGAAATCAATAATGAAGACTTGGCCACTATGAAGGATTCCGTCAGCTATGATTCTGATGTTGTTGGTAGAACTGGAATCAAGATCAAGGCCCCTGAGCCTCAACAACCATTAAGTTCAGATGATTTTGTAACTCAGGGCAGTGCTCCTAGAAGAATCCGTTTGCAGATGAAAAGTTCACCTTGGTCAGTTGCTGATAGCAAAGTGAGAGATACAACCCCTGGTGAAGAAGATAATGTACAGTCAACTATTCATGAGGTCAAAGAAGCCAGAGAGAAGATTTGTAATTTCGATGGGCAAGATGCAGAGTCCCATCTTTCGAAGTCAGACGTGAACAGGAAAATAATTGATGATTCACCAACAAAACCAGTTGATGAGAGCAGTGGAACTGCTGGAGAAGCCCCAAGAAAATTGAGGTTAAGGACAGCAAGGGACGATGCATTACCCAGCAACCATATTGGGAAGTCAATGCCTTCAAAGACAATGCCTAAAGGCCACGGCCTGAGTCCTACATTCGTTGTTTCGGTTGGTATTCCTTTAGCTGTAACCCTGTTCGTTGCGTTTAGTGGGATTTGGATGACATTTAGACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0033554 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044212 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0098827 GO:0104004 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

852

Amino Acids

94.39

Weight (kDa)

4.82

Isoelectric Point (pI)

47.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	10 - 143	5.8e-47	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008594)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33060 AT1G33060 AT4G35580 AT4G35580 AT4G35580
fragaria_vesca	FvH4_5g10350 FvH4_5g10350
malus_domestica	MD00G1096600.v1.1 MD06G1124800.v1.1
prunus_persica	Prupe.5G135400_v2.0.a1 Prupe.5G135400_v2.0.a1
pyrus_communis	pycom06g11540 pycom14g11690
rosa_chinensis	RchiOBHm_Chr7g0187871
rosa_laevigata	RLG00000004751
rosa_multiflora	Rmu_ssc0000122.1_g000021
rosa_roxburghii	Rroxscaffold_3G00266990
rosa_rugosa	Rorug06G0484900
rosa_samantha	Rh7AG090100 Rh7BG091700 Rh7CG090800 Rh7DG092500
rosa_wichuraiana	Rw7G007780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	304
Acc36I	ACCTGC	1 cut(s)	87
AccB1I	GGYRCC	1 cut(s)	470
AccII	CGCG	2 cut(s)	384, 1091
AciI	CCGC	8 cut(s)	5, 82, 644, 707, 819, 1089, 1094, 1292
AclWI	GGATC	8 cut(s)	419, 619, 760, 773, 1215, 1703, 1801, 1814
AcoI	YGGCCR	4 cut(s)	97, 238, 340, 1986
AcsI	RAATTY	1 cut(s)	1765
AcuI	CTGAAG	2 cut(s)	107, 1263
AfaI	GTAC	5 cut(s)	230, 522, 1184, 1890, 2202
AfiI	CCNNNNNNNGG	5 cut(s)	222, 393, 394, 467, 1280
AflIII	ACRYGT	1 cut(s)	950
AgsI	TTSAA	4 cut(s)	542, 1114, 1657, 2439
AjiI	CACGTC	1 cut(s)	2293
AjnI	CCWGG	3 cut(s)	465, 768, 2182
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
AluBI	AGCT	9 cut(s)	10, 64, 408, 614, 874, 1014, 1241, 2010, 2504
AluI	AGCT	9 cut(s)	10, 64, 408, 614, 874, 1014, 1241, 2010, 2504
Alw21I	GWGCWC	4 cut(s)	66, 1016, 1088, 2110
Alw26I	GTCTC	2 cut(s)	1055, 1854
Alw44I	GTGCAC	1 cut(s)	1084
AlwI	GGATC	8 cut(s)	419, 619, 760, 773, 1215, 1703, 1801, 1814
AlwNI	CAGNNNCTG	3 cut(s)	1322, 1933, 2156
Ama87I	CYCGRG	1 cut(s)	216
ApaLI	GTGCAC	1 cut(s)	1084
ApeKI	GCWGC	3 cut(s)	25, 1478, 1747
ApoI	RAATTY	1 cut(s)	1765
AseI	ATTAAT	1 cut(s)	864
AspA2I	CCTAGG	1 cut(s)	1799
AspLEI	GCGC	3 cut(s)	386, 402, 1093
AsuC2I	CCSGG	4 cut(s)	125, 217, 218, 462
AsuHPI	GGTGA	7 cut(s)	644, 837, 885, 1138, 2133, 2198, 2310
AsuII	TTCGAA	1 cut(s)	2282
AvaI	CYCGRG	1 cut(s)	216
AvaII	GGWCC	7 cut(s)	112, 292, 297, 458, 1430, 1504, 1836
AvrII	CCTAGG	1 cut(s)	1799
AxyI	CCTNAGG	1 cut(s)	390
BaeGI	GKGCMC	3 cut(s)	1088, 1475, 1793
BalI	TGGCCA	3 cut(s)	240, 342, 1988
BamHI	GGATCC	2 cut(s)	765, 1806
BanI	GGYRCC	1 cut(s)	470
BanII	GRGCYC	3 cut(s)	66, 1016, 1426
BarI	GAAGNNNNNNTAC	4 cut(s)	1872, 1904, 2184, 2216
BauI	CACGAG	3 cut(s)	419, 1105, 1425
BbsI	GAAGAC	3 cut(s)	365, 1492, 1986
Bbv12I	GWGCWC	4 cut(s)	66, 1016, 1088, 2110
BbvI	GCAGC	3 cut(s)	12, 1465, 1759
BceAI	ACGGC	5 cut(s)	13, 84, 112, 961, 2476
BcgI	CGANNNNNNTGC	4 cut(s)	407, 410, 441, 444
BciT130I	CCWGG	3 cut(s)	467, 770, 2184
BciVI	GTATCC	2 cut(s)	263, 976
BclI	TGATCA	1 cut(s)	190
BcnI	CCSGG	4 cut(s)	125, 217, 218, 462
BcoDI	GTCTC	2 cut(s)	1055, 1854
BfaI	CTAG	5 cut(s)	1275, 1596, 1800, 1911, 2112
BfmI	CTRYAG	2 cut(s)	1211, 1552
BfuAI	ACCTGC	1 cut(s)	87
BfuI	GTATCC	2 cut(s)	263, 976
BisI	GCNGC	6 cut(s)	26, 83, 820, 1094, 1479, 1748
BlnI	CCTAGG	1 cut(s)	1799
BlpI	GCTNAGC	1 cut(s)	1323
BlsI	GCNGC	6 cut(s)	27, 84, 821, 1095, 1480, 1749
Bme1390I	CCNGG	7 cut(s)	125, 217, 218, 462, 467, 770, 2184
Bme18I	GGWCC	7 cut(s)	112, 292, 297, 458, 1430, 1504, 1836
BmeT110I	CYCGRG	1 cut(s)	216
BmgBI	CACGTC	1 cut(s)	2293
BmiI	GGNNCC	8 cut(s)	38, 150, 472, 767, 1201, 1808, 1837, 2055
BmrFI	CCNGG	7 cut(s)	125, 217, 218, 462, 467, 770, 2184
BmsI	GCATC	5 cut(s)	253, 685, 1262, 2254, 2389
BpiI	GAAGAC	3 cut(s)	365, 1492, 1986
BpmI	CTGGAG	1 cut(s)	2376
Bpu10I	CCTNAGC	1 cut(s)	2058
Bpu1102I	GCTNAGC	1 cut(s)	1323
Bpu14I	TTCGAA	1 cut(s)	2282
BpuMI	CCSGG	4 cut(s)	125, 217, 218, 462
BsaI	GGTCTC	1 cut(s)	1055
BsaWI	WCCGGW	2 cut(s)	39, 294
BsaXI	ACNNNNNCTCC	2 cut(s)	1795, 1825
Bsc4I	CCNNNNNNNGG	5 cut(s)	222, 393, 394, 467, 1280
Bse1I	ACTGG	9 cut(s)	278, 460, 553, 903, 963, 1097, 1411, 2041, 2330
Bse21I	CCTNAGG	1 cut(s)	390
Bse3DI	GCAATG	3 cut(s)	343, 1540, 1839
BseBI	CCWGG	3 cut(s)	467, 770, 2184
BseGI	GGATG	6 cut(s)	120, 357, 967, 991, 1366, 2544
BseLI	CCNNNNNNNGG	5 cut(s)	222, 393, 394, 467, 1280
BseMI	GCAATG	3 cut(s)	343, 1540, 1839
BseMII	CTCAG	9 cut(s)	606, 1314, 1329, 1799, 1896, 1953, 2049, 2111, 2456
BseNI	ACTGG	9 cut(s)	278, 460, 553, 903, 963, 1097, 1411, 2041, 2330
BseRI	GAGGAG	2 cut(s)	74, 1037
BseSI	GKGCMC	3 cut(s)	1088, 1475, 1793
BseX3I	CGGCCG	1 cut(s)	97
BseXI	GCAGC	3 cut(s)	12, 1465, 1759
BseYI	CCCAGC	2 cut(s)	1149, 2408
Bsh1236I	CGCG	2 cut(s)	384, 1091
Bsh1285I	CGRYCG	1 cut(s)	100
BshNI	GGYRCC	1 cut(s)	470
BsiEI	CGRYCG	1 cut(s)	100
BsiHKAI	GWGCWC	4 cut(s)	66, 1016, 1088, 2110
BsiHKCI	CYCGRG	1 cut(s)	216
BsiSI	CCGG	5 cut(s)	40, 125, 217, 295, 461
BslFI	GGGAC	3 cut(s)	292, 2257, 2408
BslI	CCNNNNNNNGG	5 cut(s)	222, 393, 394, 467, 1280
BsmAI	GTCTC	2 cut(s)	1055, 1854
BsmFI	GGGAC	3 cut(s)	292, 2257, 2408
BsmI	GAATGC	3 cut(s)	800, 853, 1316
Bso31I	GGTCTC	1 cut(s)	1055
BsoBI	CYCGRG	1 cut(s)	216
Bsp119I	TTCGAA	1 cut(s)	2282
Bsp1286I	GDGCHC	7 cut(s)	66, 1016, 1088, 1426, 1475, 1793, 2110
Bsp1407I	TGTACA	2 cut(s)	1182, 2200
Bsp1720I	GCTNAGC	1 cut(s)	1323
Bsp19I	CCATGG	1 cut(s)	1699
BspACI	CCGC	8 cut(s)	5, 82, 644, 707, 819, 1089, 1094, 1292
BspCNI	CTCAG	9 cut(s)	605, 1315, 1328, 1798, 1897, 1952, 2050, 2110, 2457
BspFNI	CGCG	2 cut(s)	384, 1091
BspHI	TCATGA	2 cut(s)	654, 2215
BspLI	GGNNCC	8 cut(s)	38, 150, 472, 767, 1201, 1808, 1837, 2055
BspMAI	CTGCAG	1 cut(s)	1215
BspMI	ACCTGC	1 cut(s)	87
BspPI	GGATC	8 cut(s)	419, 619, 760, 773, 1215, 1703, 1801, 1814
BspQI	GCTCTTC	1 cut(s)	1635
BspT104I	TTCGAA	1 cut(s)	2282
BspT107I	GGYRCC	1 cut(s)	470
BspTNI	GGTCTC	1 cut(s)	1055
BsrDI	GCAATG	3 cut(s)	343, 1540, 1839
BsrGI	TGTACA	2 cut(s)	1182, 2200
BsrI	ACTGG	9 cut(s)	278, 460, 553, 903, 963, 1097, 1411, 2041, 2330
BssSI	CACGAG	3 cut(s)	419, 1105, 1425
BssT1I	CCWWGG	5 cut(s)	152, 628, 1699, 1799, 2144
Bst2BI	CACGAG	3 cut(s)	419, 1105, 1425
Bst2UI	CCWGG	3 cut(s)	467, 770, 2184
Bst4CI	ACNGT	5 cut(s)	849, 1298, 1508, 1775, 2205
Bst6I	CTCTTC	2 cut(s)	501, 1635
BstAPI	GCANNNNNTGC	1 cut(s)	1159
BstAUI	TGTACA	2 cut(s)	1182, 2200
BstBI	TTCGAA	1 cut(s)	2282
BstC8I	GCNNGC	4 cut(s)	1084, 1239, 1647, 1962
BstDSI	CCRYGG	3 cut(s)	51, 1699, 2458
BstF5I	GGATG	6 cut(s)	120, 357, 967, 991, 1366, 2544
BstFNI	CGCG	2 cut(s)	384, 1091
BstHHI	GCGC	3 cut(s)	386, 402, 1093
BstMAI	GTCTC	2 cut(s)	1055, 1854
BstMCI	CGRYCG	1 cut(s)	100
BstMWI	GCNNNNNNNGC	6 cut(s)	263, 1088, 1159, 1539, 1916, 2360
BstNI	CCWGG	3 cut(s)	467, 770, 2184
BstNSI	RCATGY	3 cut(s)	954, 1649, 1964
BstSCI	CCNGG	7 cut(s)	123, 215, 216, 460, 465, 768, 2182
BstSFI	CTRYAG	2 cut(s)	1211, 1552
BstSLI	GKGCMC	3 cut(s)	1088, 1475, 1793
BstUI	CGCG	2 cut(s)	384, 1091
BstV1I	GCAGC	3 cut(s)	12, 1465, 1759
BstV2I	GAAGAC	3 cut(s)	365, 1492, 1986
BstX2I	RGATCY	4 cut(s)	624, 765, 1207, 1806
BstXI	CCANNNNNNTGG	1 cut(s)	1400
BstYI	RGATCY	4 cut(s)	624, 765, 1207, 1806
BstZI	CGGCCG	1 cut(s)	97
Bsu36I	CCTNAGG	1 cut(s)	390
BsuI	GTATCC	2 cut(s)	263, 976
BtgI	CCRYGG	3 cut(s)	51, 1699, 2458
BtgZI	GCGATG	2 cut(s)	1239, 1557
BtrI	CACGTC	1 cut(s)	2293
BtsCI	GGATG	6 cut(s)	120, 357, 967, 991, 1366, 2544
BtsI	GCAGTG	4 cut(s)	1473, 1791, 2110, 2350
BveI	ACCTGC	1 cut(s)	87
Cac8I	GCNNGC	4 cut(s)	1084, 1239, 1647, 1962
CaiI	CAGNNNCTG	3 cut(s)	1322, 1933, 2156
CciI	TCATGA	2 cut(s)	654, 2215
CfoI	GCGC	3 cut(s)	386, 402, 1093
Cfr9I	CCCGGG	1 cut(s)	216
Csp6I	GTAC	5 cut(s)	229, 521, 1183, 1889, 2201
CviQI	GTAC	5 cut(s)	229, 521, 1183, 1889, 2201
DrdI	GACNNNNNNGTC	1 cut(s)	304
DseDI	GACNNNNNNGTC	1 cut(s)	304
EaeI	YGGCCR	4 cut(s)	97, 238, 340, 1986
EagI	CGGCCG	1 cut(s)	97
Eam1104I	CTCTTC	2 cut(s)	501, 1635
EarI	CTCTTC	2 cut(s)	501, 1635
EciI	GGCGGA	3 cut(s)	20, 659, 1307
Ecl136II	GAGCTC	2 cut(s)	64, 1014
EclXI	CGGCCG	1 cut(s)	97
Eco130I	CCWWGG	5 cut(s)	152, 628, 1699, 1799, 2144
Eco24I	GRGCYC	3 cut(s)	66, 1016, 1426
Eco31I	GGTCTC	1 cut(s)	1055
Eco47I	GGWCC	7 cut(s)	112, 292, 297, 458, 1430, 1504, 1836
Eco52I	CGGCCG	1 cut(s)	97
Eco53kI	GAGCTC	2 cut(s)	64, 1014
Eco57I	CTGAAG	2 cut(s)	107, 1263
Eco81I	CCTNAGG	1 cut(s)	390
Eco88I	CYCGRG	1 cut(s)	216
EcoICRI	GAGCTC	2 cut(s)	64, 1014
EcoO109I	RGGNCCY	1 cut(s)	2053
EcoRII	CCWGG	3 cut(s)	465, 768, 2182
EcoT14I	CCWWGG	5 cut(s)	152, 628, 1699, 1799, 2144
EcoT22I	ATGCAT	1 cut(s)	2404
EcoT38I	GRGCYC	3 cut(s)	66, 1016, 1426
ErhI	CCWWGG	5 cut(s)	152, 628, 1699, 1799, 2144
FalI	AAGNNNNNCTT	4 cut(s)	1242, 1274, 2128, 2160
FaqI	GGGAC	3 cut(s)	292, 2257, 2408
FbaI	TGATCA	1 cut(s)	190
Fnu4HI	GCNGC	6 cut(s)	26, 83, 820, 1094, 1479, 1748
FokI	GGATG	6 cut(s)	107, 364, 974, 998, 1373, 2551
FriOI	GRGCYC	3 cut(s)	66, 1016, 1426
Fsp4HI	GCNGC	6 cut(s)	26, 83, 820, 1094, 1479, 1748
FspBI	CTAG	5 cut(s)	1275, 1596, 1800, 1911, 2112
GlaI	GCGC	3 cut(s)	385, 401, 1092
GluI	GCNGC	6 cut(s)	26, 83, 820, 1094, 1479, 1748
GsaI	CCCAGC	2 cut(s)	1153, 2412
GsuI	CTGGAG	1 cut(s)	2376
HapII	CCGG	5 cut(s)	40, 125, 217, 295, 461
HhaI	GCGC	3 cut(s)	386, 402, 1093
Hin6I	GCGC	3 cut(s)	384, 400, 1091
HinP1I	GCGC	3 cut(s)	384, 400, 1091
HincII	GTYRAC	4 cut(s)	666, 1029, 1390, 2208
HindII	GTYRAC	4 cut(s)	666, 1029, 1390, 2208
HpaII	CCGG	5 cut(s)	40, 125, 217, 295, 461
HphI	GGTGA	7 cut(s)	644, 837, 885, 1138, 2133, 2198, 2310
Hpy99I	CGWCG	1 cut(s)	137
HpyAV	CCTTC	6 cut(s)	271, 283, 505, 641, 1990, 2445
HpyCH4III	ACNGT	5 cut(s)	849, 1298, 1508, 1775, 2205
HpyCH4IV	ACGT	4 cut(s)	135, 362, 684, 2292
HpyF10VI	GCNNNNNNNGC	6 cut(s)	263, 1088, 1159, 1539, 1916, 2360
HpySE526I	ACGT	4 cut(s)	135, 362, 684, 2292
HspAI	GCGC	3 cut(s)	384, 400, 1091
Ksp22I	TGATCA	1 cut(s)	190
LguI	GCTCTTC	1 cut(s)	1635
LmnI	GCTCC	7 cut(s)	7, 61, 148, 397, 749, 1801, 2113
Lsp1109I	GCAGC	3 cut(s)	12, 1465, 1759
LweI	GCATC	5 cut(s)	253, 685, 1262, 2254, 2389
MaeI	CTAG	5 cut(s)	1275, 1596, 1800, 1911, 2112
MaeII	ACGT	4 cut(s)	135, 362, 684, 2292
MaeIII	GTNAC	5 cut(s)	685, 905, 1780, 2092, 2506
MflI	RGATCY	4 cut(s)	624, 765, 1207, 1806
MhlI	GDGCHC	7 cut(s)	66, 1016, 1088, 1426, 1475, 1793, 2110
MlsI	TGGCCA	3 cut(s)	240, 342, 1988
MluNI	TGGCCA	3 cut(s)	240, 342, 1988
MlyI	GAGTC	9 cut(s)	126, 596, 818, 1034, 1624, 1735, 1939, 2279, 2476
MmeI	TCCRAC	2 cut(s)	963, 1355
Mox20I	TGGCCA	3 cut(s)	240, 342, 1988
Mph1103I	ATGCAT	1 cut(s)	2404
MscI	TGGCCA	3 cut(s)	240, 342, 1988
MseI	TTAA	4 cut(s)	864, 1695, 2075, 2381
MslI	CAYNNNNRTG	3 cut(s)	722, 1398, 1704
Msp20I	TGGCCA	3 cut(s)	240, 342, 1988
MspA1I	CMGCKG	1 cut(s)	408
MspI	CCGG	5 cut(s)	40, 125, 217, 295, 461
MspR9I	CCNGG	7 cut(s)	125, 217, 218, 462, 467, 770, 2184
Mva1269I	GAATGC	3 cut(s)	800, 853, 1316
MvaI	CCWGG	3 cut(s)	467, 770, 2184
MvnI	CGCG	2 cut(s)	384, 1091
MwoI	GCNNNNNNNGC	6 cut(s)	263, 1088, 1159, 1539, 1916, 2360
NciI	CCSGG	4 cut(s)	125, 217, 218, 462
NcoI	CCATGG	1 cut(s)	1699
NlaIV	GGNNCC	8 cut(s)	38, 150, 472, 767, 1201, 1808, 1837, 2055
NmeAIII	GCCGAG	1 cut(s)	1723
NmuCI	GTSAC	2 cut(s)	685, 905
NsiI	ATGCAT	1 cut(s)	2404
NspI	RCATGY	3 cut(s)	954, 1649, 1964
NspV	TTCGAA	1 cut(s)	2282
PaeI	GCATGC	2 cut(s)	1649, 1964
PagI	TCATGA	2 cut(s)	654, 2215
PciI	ACATGT	1 cut(s)	950
PciSI	GCTCTTC	1 cut(s)	1635
PctI	GAATGC	3 cut(s)	800, 853, 1316
PfoI	TCCNGGA	1 cut(s)	123
PkrI	GCNGC	6 cut(s)	27, 84, 821, 1095, 1480, 1749
PleI	GAGTC	9 cut(s)	125, 595, 817, 1033, 1623, 1735, 1938, 2278, 2475
PpsI	GAGTC	9 cut(s)	125, 595, 817, 1033, 1623, 1735, 1938, 2278, 2475
PscI	ACATGT	1 cut(s)	950
PshBI	ATTAAT	1 cut(s)	864
Psp124BI	GAGCTC	2 cut(s)	66, 1016
Psp6I	CCWGG	3 cut(s)	465, 768, 2182
PspFI	CCCAGC	2 cut(s)	1149, 2408
PspGI	CCWGG	3 cut(s)	465, 768, 2182
PspN4I	GGNNCC	8 cut(s)	38, 150, 472, 767, 1201, 1808, 1837, 2055
PstI	CTGCAG	1 cut(s)	1215
PstNI	CAGNNNCTG	3 cut(s)	1322, 1933, 2156
PsuI	RGATCY	4 cut(s)	624, 765, 1207, 1806
PvuII	CAGCTG	1 cut(s)	408
RsaI	GTAC	5 cut(s)	230, 522, 1184, 1890, 2202
RsaNI	GTAC	5 cut(s)	229, 521, 1183, 1889, 2201
RseI	CAYNNNNRTG	3 cut(s)	722, 1398, 1704
SacI	GAGCTC	2 cut(s)	66, 1016
SapI	GCTCTTC	1 cut(s)	1635
SaqAI	TTAA	4 cut(s)	864, 1695, 2075, 2381
SatI	GCNGC	6 cut(s)	26, 83, 820, 1094, 1479, 1748
SchI	GAGTC	9 cut(s)	126, 596, 818, 1034, 1624, 1735, 1939, 2279, 2476
ScrFI	CCNGG	7 cut(s)	125, 217, 218, 462, 467, 770, 2184
SduI	GDGCHC	7 cut(s)	66, 1016, 1088, 1426, 1475, 1793, 2110
SfaNI	GCATC	5 cut(s)	253, 685, 1262, 2254, 2389
SfcI	CTRYAG	2 cut(s)	1211, 1552
SfuI	TTCGAA	1 cut(s)	2282
SinI	GGWCC	7 cut(s)	112, 292, 297, 458, 1430, 1504, 1836
SmaI	CCCGGG	1 cut(s)	218
SmiMI	CAYNNNNRTG	3 cut(s)	722, 1398, 1704
SphI	GCATGC	2 cut(s)	1649, 1964
SsiI	CCGC	8 cut(s)	5, 82, 644, 707, 819, 1089, 1094, 1292
SspI	AATATT	2 cut(s)	1653, 1825
SspMI	CTAG	5 cut(s)	1275, 1596, 1800, 1911, 2112
SstI	GAGCTC	2 cut(s)	66, 1016
StyD4I	CCNGG	7 cut(s)	123, 215, 216, 460, 465, 768, 2182
StyI	CCWWGG	5 cut(s)	152, 628, 1699, 1799, 2144
TaaI	ACNGT	5 cut(s)	849, 1298, 1508, 1775, 2205
TaiI	ACGT	4 cut(s)	138, 365, 687, 2295
TaqI	TCGA	6 cut(s)	14, 132, 447, 1367, 2253, 2282
TaqII	GACCGA	1 cut(s)	234
TatI	WGTACW	3 cut(s)	1182, 1888, 2200
TauI	GCSGC	3 cut(s)	85, 822, 1096
Tru1I	TTAA	4 cut(s)	864, 1695, 2075, 2381
Tru9I	TTAA	4 cut(s)	864, 1695, 2075, 2381
TseFI	GTSAC	2 cut(s)	685, 905
TseI	GCWGC	3 cut(s)	25, 1478, 1747
Tsp45I	GTSAC	2 cut(s)	685, 905
TspGWI	ACGGA	5 cut(s)	68, 1148, 1799, 1993, 2111
TspMI	CCCGGG	1 cut(s)	216
VneI	GTGCAC	1 cut(s)	1084
VpaK11BI	GGWCC	7 cut(s)	112, 292, 297, 458, 1430, 1504, 1836
VspI	ATTAAT	1 cut(s)	864
XapI	RAATTY	1 cut(s)	1765
XceI	RCATGY	3 cut(s)	954, 1649, 1964
XmaI	CCCGGG	1 cut(s)	216
XmaJI	CCTAGG	1 cut(s)	1799
XspI	CTAG	5 cut(s)	1275, 1596, 1800, 1911, 2112
Zsp2I	ATGCAT	1 cut(s)	2404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.