pycom06g17360

DnaJ molecular chaperone homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0005502
Physical Location & Seq
Forward (+)
21366880 .. 21373354
6475 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2157 bp
ATGCACGGCAGTCTCTTCGTCACTCTCTTCTTTGCAACCGGAACCAGAAATTTTCCGCTGCGGTTGAGCTCCATGGTAAAGCCTGCGTCTCCGGCCGCGACGAAGTCGACGGCGTCGGTAATCAAAGCCTACTCTTTGCCTCTGATTCTCTTCGCTGCCGCCATGTTCTTCCAGCTCTTCGTTATTCCCAAATCCTTCCCTCCCTCTCATTACGATATTCTTGGTATAAGGAGCTATAGCTCCATTGAAGAAGTGAAAGAGGCGTATGAAAATATTTCTTCAGTCTGGAATTCAGACGGGCAGGCTCCGGATACTTCCGATTTTATCAAGATTCAATATGCTTTTGAGTTGCTGGCAAATCCAGTGTGGAAAAGAAACTATGACATATTCGGCATCGATGAGCAAATAGATGTGGTTGAGAAGGTCACAGAGCAATATAAAGGAGAAAGCTTTTCGAAGATAGACCTTCCTTTGCTAGAGTCTGTTGCTTATGAAACCGAAGACCATGATGGTACAGTCATGACCTCCAAGGATTTTCAGACTATGTTCGAGGGTAACAAACCATGGCTGATTCAGGTGTGCTCATTTGGGAGCAAAAGCTACTATCAGTTTTCTGATGTGTGGAAGAAAATTGCTGTTTTTCTGAATGGTGTGGCAAATACTGGTATGTTGGAACTTGGAGAGCTTCAGCTAGCGACACATTTTGCTGAGAGAAAACCAACTGGACAACCTTTCTTCAGGAATGGCATTCCTTCTCTTGTTGCTTTTCCGCCGGGGTGTAAAACTGCCAATTGTTTTATTAGGTATGAAGGAGATCTCTCTGTTGATTCAATCACAGATTGGTTTGCAACAACCATACTTGGTTTGCCTCGTATTCTTTACTACTCAAAGGAGACACTGGGGCAGAAGTTTCTAGCAAAAGTTAGTCTTCATAAGGTAAGAGTCATTTTCTTCTCAAAAACGGGGGTGCGTGCTGCTCCATTCATACGCCAAGCTGCTAAAAATTATTGGGCTCATGCTTCTTTTGCATTCGTGTTGTGGCAAGAAGAGGAATCTTCCTTTTGGTTTAATTCGTTTGAGGTGGAATCTGCACCTGCTATAGTGATTTTGAAAGATCCTGGTGTCAAACCTGTTGTGTACCACGGATCTTTTGACTACTCACAGTTCTTAAATATTATGGAGCAAAATAAACAACAAGAGCTACCTCAGTTGAGGAGTACGACATCCATGGAATTGGGTTGTGATTCTCGAGGTTATTCTCGTGCTGGATATGATACCGTTACTTGGTACTGTGCTGTTGTAGCAGGGAGGCATAGCCCAGAACTCAGTAACATGCGTGGAGCCATTCGCAGGGTTCAAGAGAAATTGTCAAATGAAGTCGAGTCAAGGTCAGCTGATGAAGTGCAATCTATAGCACCAGCAGCAGAAGCGCTTAAAAGCAAACGACTGACATTTGCTTGGCTTGACGGAGAATCCCAAAAGAAATATTGCCTCTTCTTCCTCCAATCTGAGAACAGCCATGAAACTTGTGGAGAAAGGACAGATATGACCGATGTTCCTCAGTTATTTATTGTACGCTATAAGAGGAATGTGACAGAAGAGAGTGAGAAGCCCGAGAAGAAGCCGAAAAGCATATGGGATGCAGTGCAAGACCAGGAATTAGATCCTGCATCACAGCTTGTGGCAAAGTACAATGGTTCAGATGATACTCAGGAGATTACTAAATGGATCTCGCAAATAATCAATGATGGCGACTCCAGAGATCTTCCTCATTATAGAACAAGAACTCCTCATTTGGTTCCTGAGGATTCAGAGCCAATATGGTCAGCCGGTGTCCAAAGAATTCCTTCAACAAACACGATCATGCAGAGCATCCGTGGAATGCTACGTGGAGTCTATGATCGCGTTGGAGATCCAAGGCTTGGTCCAATGCTGCTTCTAGCCGCATTGATGTCTTTCGGTACCATCTGGCTTCGGAGGAGTCAAGCAACTCCAGTGTCTAGTCAACCAAATCAGCCAAATTCCAAGGATGAAAGTAGACGAAGAAGGAGAGACCGGGCTAGAAACGTGCTTAATCAAGACCTACCCCCTTCCATCACCGATATGGAACCAAGAGACTCTTATGAAATGCCACTGTCAGGTTCCGACTCCGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001671 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0006457 GO:0006508 GO:0006511 GO:0006807 GO:0006915 GO:0006950 GO:0007154 GO:0007165 GO:0008047 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0010563 GO:0010605 GO:0012501 GO:0012505 GO:0015035 GO:0015036 GO:0016491 GO:0016667 GO:0016671 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023052 GO:0030163 GO:0030234 GO:0030433 GO:0030544 GO:0031072 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0032268 GO:0032269 GO:0032781 GO:0032991 GO:0033554 GO:0034663 GO:0034975 GO:0034976 GO:0035556 GO:0036503 GO:0042221 GO:0042325 GO:0042326 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043462 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051087 GO:0051117 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051345 GO:0051603 GO:0051716 GO:0051787 GO:0055114 GO:0060255 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0070059 GO:0071704 GO:0080090 GO:0097190 GO:0097193 GO:0098772 GO:1901564 GO:1901565 GO:1901575 GO:1901698
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

719

Amino Acids

81.33

Weight (kDa)

5.92

Isoelectric Point (pI)

51.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 70 - 128 1.8e-07 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1102
Acc36I ACCTGC 1 cut(s) 1102
Acc65I GGTACC 1 cut(s) 1961
AccB1I GGYRCC 1 cut(s) 1961
AccB7I CCANNNNNTGG 1 cut(s) 1922
AccI GTMKAC 2 cut(s) 107, 2038
AccII CGCG 2 cut(s) 98, 1905
AccIII TCCGGA 1 cut(s) 307
AciI CCGC 6 cut(s) 56, 61, 96, 159, 770, 1944
AclWI GGATC 5 cut(s) 1109, 1153, 1658, 1736, 1907
AcoI YGGCCR 1 cut(s) 93
AcsI RAATTY 4 cut(s) 49, 289, 1842, 2020
AcuI CTGAAG 3 cut(s) 264, 671, 721
AcyI GRCGYC 1 cut(s) 113
AfaI GTAC 7 cut(s) 514, 1139, 1219, 1289, 1575, 1691, 1963
AfeI AGCGCT 1 cut(s) 1431
AfiI CCNNNNNNNGG 4 cut(s) 1284, 1350, 1922, 2138
AgsI TTSAA 6 cut(s) 248, 335, 831, 1111, 1358, 1851
AjnI CCWGG 2 cut(s) 1117, 1653
AloI GAACNNNNNNTCC 2 cut(s) 1771, 1803
Alw21I GWGCWC 2 cut(s) 71, 584
Alw26I GTCTC 5 cut(s) 17, 93, 887, 2046, 2109
AlwI GGATC 5 cut(s) 1109, 1153, 1658, 1736, 1907
Ama87I CYCGRG 2 cut(s) 1248, 1613
Aor13HI TCCGGA 1 cut(s) 307
Aor51HI AGCGCT 1 cut(s) 1431
AoxI GGCC 1 cut(s) 93
ApeKI GCWGC 6 cut(s) 58, 155, 974, 995, 1421, 1933
ApoI RAATTY 4 cut(s) 49, 289, 1842, 2020
Asp700I GAANNNNTTC 1 cut(s) 1846
Asp718I GGTACC 1 cut(s) 1961
AspLEI GCGC 1 cut(s) 1432
AspS9I GGNCC 1 cut(s) 1925
AsuC2I CCSGG 2 cut(s) 774, 2057
AsuHPI GGTGA 1 cut(s) 2089
AsuII TTCGAA 1 cut(s) 455
AsuNHI GCTAGC 1 cut(s) 691
AvaI CYCGRG 2 cut(s) 1248, 1613
AvaII GGWCC 1 cut(s) 1925
AxyI CCTNAGG 1 cut(s) 1803
BanI GGYRCC 1 cut(s) 1961
BanII GRGCYC 2 cut(s) 71, 1015
BauI CACGAG 1 cut(s) 1260
BbsI GAAGAC 2 cut(s) 507, 920
Bbv12I GWGCWC 2 cut(s) 71, 584
BbvI GCAGC 6 cut(s) 45, 142, 961, 982, 1433, 1920
BccI CCATC 4 cut(s) 503, 1742, 1973, 2102
BceAI ACGGC 2 cut(s) 22, 126
BcgI CGANNNNNNTGC 1 cut(s) 32
BciT130I CCWGG 2 cut(s) 1119, 1655
BciVI GTATCC 1 cut(s) 304
BcnI CCSGG 2 cut(s) 774, 2057
BcoDI GTCTC 5 cut(s) 17, 93, 887, 2046, 2109
BfaI CTAG 6 cut(s) 476, 692, 914, 1940, 2001, 2061
BfmI CTRYAG 3 cut(s) 235, 1098, 1410
BfoI RGCGCY 1 cut(s) 1433
BfuAI ACCTGC 1 cut(s) 1102
BfuI GTATCC 1 cut(s) 304
BglII AGATCT 2 cut(s) 814, 1762
BisI GCNGC 9 cut(s) 59, 96, 156, 159, 975, 996, 1422, 1934, 1944
BlsI GCNGC 9 cut(s) 60, 97, 157, 160, 976, 997, 1423, 1935, 1945
Bme1390I CCNGG 4 cut(s) 774, 1119, 1655, 2057
Bme18I GGWCC 1 cut(s) 1925
BmeT110I CYCGRG 2 cut(s) 1248, 1613
BmgT120I GGNCC 1 cut(s) 1925
BmiI GGNNCC 7 cut(s) 43, 306, 1342, 1800, 1963, 2109, 2143
BmrFI CCNGG 4 cut(s) 774, 1119, 1655, 2057
BmrI ACTGGG 1 cut(s) 908
BmsI GCATC 4 cut(s) 402, 1630, 1679, 1881
BmtI GCTAGC 1 cut(s) 695
BmuI ACTGGG 1 cut(s) 908
BpiI GAAGAC 2 cut(s) 507, 920
BpmI CTGGAG 2 cut(s) 1741, 1977
Bpu14I TTCGAA 1 cut(s) 455
BpuMI CCSGG 2 cut(s) 774, 2057
Bsa29I ATCGAT 1 cut(s) 396
BsaAI YACGTR 1 cut(s) 1889
BsaHI GRCGYC 1 cut(s) 113
BsaI GGTCTC 1 cut(s) 2046
BsaJI CCNNGG 9 cut(s) 72, 528, 563, 773, 1141, 1227, 1876, 1916, 2025
BsaWI WCCGGW 2 cut(s) 38, 307
BsaXI ACNNNNNCTCC 2 cut(s) 1771, 1801
Bsc4I CCNNNNNNNGG 4 cut(s) 1284, 1350, 1922, 2138
Bse118I RCCGGY 1 cut(s) 1829
Bse1I ACTGG 5 cut(s) 362, 667, 727, 903, 1994
Bse21I CCTNAGG 1 cut(s) 1803
BseAI TCCGGA 1 cut(s) 307
BseBI CCWGG 2 cut(s) 1119, 1655
BseCI ATCGAT 1 cut(s) 396
BseDI CCNNGG 9 cut(s) 72, 528, 563, 773, 1141, 1227, 1876, 1916, 2025
BseGI GGATG 4 cut(s) 1223, 1645, 1872, 2035
BseLI CCNNNNNNNGG 4 cut(s) 1284, 1350, 1922, 2138
BseMII CTCAG 7 cut(s) 699, 1220, 1339, 1500, 1574, 1724, 1794
BseNI ACTGG 5 cut(s) 362, 667, 727, 903, 1994
BseRI GAGGAG 3 cut(s) 1228, 1779, 1993
BseX3I CGGCCG 1 cut(s) 93
BseXI GCAGC 6 cut(s) 45, 142, 961, 982, 1433, 1920
BsgI GTGCAG 1 cut(s) 1074
Bsh1236I CGCG 2 cut(s) 98, 1905
Bsh1285I CGRYCG 1 cut(s) 96
BshFI GGCC 1 cut(s) 95
BshNI GGYRCC 1 cut(s) 1961
BshVI ATCGAT 1 cut(s) 396
BsiEI CGRYCG 1 cut(s) 96
BsiHKAI GWGCWC 2 cut(s) 71, 584
BsiHKCI CYCGRG 2 cut(s) 1248, 1613
BsiSI CCGG 6 cut(s) 39, 92, 308, 773, 1830, 2056
BslI CCNNNNNNNGG 4 cut(s) 1284, 1350, 1922, 2138
BsmAI GTCTC 5 cut(s) 17, 93, 887, 2046, 2109
BsmBI CGTCTC 1 cut(s) 93
BsmI GAATGC 3 cut(s) 747, 1028, 1887
BsnI GGCC 1 cut(s) 95
Bso31I GGTCTC 1 cut(s) 2046
BsoBI CYCGRG 2 cut(s) 1248, 1613
Bsp119I TTCGAA 1 cut(s) 455
Bsp1286I GDGCHC 3 cut(s) 71, 584, 1015
Bsp13I TCCGGA 1 cut(s) 307
Bsp143I GATC 9 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
Bsp19I CCATGG 3 cut(s) 72, 563, 1227
BspACI CCGC 6 cut(s) 56, 61, 96, 159, 770, 1944
BspANI GGCC 1 cut(s) 95
BspCNI CTCAG 7 cut(s) 700, 1219, 1338, 1501, 1573, 1723, 1795
BspDI ATCGAT 1 cut(s) 396
BspEI TCCGGA 1 cut(s) 307
BspFNI CGCG 2 cut(s) 98, 1905
BspHI TCATGA 1 cut(s) 519
BspLI GGNNCC 7 cut(s) 43, 306, 1342, 1800, 1963, 2109, 2143
BspMI ACCTGC 1 cut(s) 1102
BspOI GCTAGC 1 cut(s) 695
BspPI GGATC 5 cut(s) 1109, 1153, 1658, 1736, 1907
BspQI GCTCTTC 1 cut(s) 182
BspT104I TTCGAA 1 cut(s) 455
BspT107I GGYRCC 1 cut(s) 1961
BspTNI GGTCTC 1 cut(s) 2046
BsrFI RCCGGY 1 cut(s) 1829
BsrI ACTGG 5 cut(s) 362, 667, 727, 903, 1994
BssAI RCCGGY 1 cut(s) 1829
BssECI CCNNGG 9 cut(s) 72, 528, 563, 773, 1141, 1227, 1876, 1916, 2025
BssMI GATC 9 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
BssNI GRCGYC 1 cut(s) 113
BssSI CACGAG 1 cut(s) 1260
BssT1I CCWWGG 6 cut(s) 72, 528, 563, 1227, 1916, 2025
Bst2BI CACGAG 1 cut(s) 1260
Bst2UI CCWGG 2 cut(s) 1119, 1655
Bst4CI ACNGT 5 cut(s) 517, 1164, 1279, 1292, 2136
Bst6I CTCTTC 7 cut(s) 20, 32, 155, 182, 1041, 1499, 1593
BstACI GRCGYC 1 cut(s) 113
BstBAI YACGTR 1 cut(s) 1889
BstBI TTCGAA 1 cut(s) 455
BstC8I GCNNGC 5 cut(s) 84, 303, 354, 693, 972
BstDEI CTNAG 7 cut(s) 708, 1206, 1325, 1509, 1560, 1710, 1803
BstDSI CCRYGG 5 cut(s) 72, 563, 1141, 1227, 1876
BstF5I GGATG 4 cut(s) 1223, 1645, 1872, 2035
BstFNI CGCG 2 cut(s) 98, 1905
BstH2I RGCGCY 1 cut(s) 1433
BstHHI GCGC 1 cut(s) 1432
BstKTI GATC 9 cut(s) 817, 1117, 1148, 1666, 1731, 1765, 1863, 1903, 1915
BstMAI GTCTC 5 cut(s) 17, 93, 887, 2046, 2109
BstMBI GATC 9 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
BstMCI CGRYCG 1 cut(s) 96
BstMWI GCNNNNNNNGC 5 cut(s) 92, 1025, 1301, 1421, 1427
BstNI CCWGG 2 cut(s) 1119, 1655
BstNSI RCATGY 1 cut(s) 1336
BstSCI CCNGG 4 cut(s) 772, 1117, 1653, 2055
BstSFI CTRYAG 3 cut(s) 235, 1098, 1410
BstUI CGCG 2 cut(s) 98, 1905
BstV1I GCAGC 6 cut(s) 45, 142, 961, 982, 1433, 1920
BstV2I GAAGAC 2 cut(s) 507, 920
BstX2I RGATCY 7 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1912
BstXI CCANNNNNNTGG 1 cut(s) 1234
BstYI RGATCY 7 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1912
BstZI CGGCCG 1 cut(s) 93
Bsu15I ATCGAT 1 cut(s) 396
Bsu36I CCTNAGG 1 cut(s) 1803
BsuI GTATCC 1 cut(s) 304
BsuRI GGCC 1 cut(s) 95
BsuTUI ATCGAT 1 cut(s) 396
BtgI CCRYGG 5 cut(s) 72, 563, 1141, 1227, 1876
BtsCI GGATG 4 cut(s) 1223, 1645, 1872, 2035
BtsI GCAGTG 1 cut(s) 1650
BtsIMutI CAGTG 5 cut(s) 369, 896, 1650, 2001, 2132
BveI ACCTGC 1 cut(s) 1102
Cac8I GCNNGC 5 cut(s) 84, 303, 354, 693, 972
CciI TCATGA 1 cut(s) 519
CfoI GCGC 1 cut(s) 1432
Cfr10I RCCGGY 1 cut(s) 1829
Cfr13I GGNCC 1 cut(s) 1925
ClaI ATCGAT 1 cut(s) 396
CseI GACGC 2 cut(s) 75, 102
Csp6I GTAC 7 cut(s) 513, 1138, 1218, 1288, 1574, 1690, 1962
CviQI GTAC 7 cut(s) 513, 1138, 1218, 1288, 1574, 1690, 1962
DdeI CTNAG 7 cut(s) 708, 1206, 1325, 1509, 1560, 1710, 1803
DpnI GATC 9 cut(s) 816, 1116, 1147, 1665, 1730, 1764, 1862, 1902, 1914
DpnII GATC 9 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
EaeI YGGCCR 1 cut(s) 93
EagI CGGCCG 1 cut(s) 93
Eam1104I CTCTTC 7 cut(s) 20, 32, 155, 182, 1041, 1499, 1593
EarI CTCTTC 7 cut(s) 20, 32, 155, 182, 1041, 1499, 1593
EciI GGCGGA 1 cut(s) 759
Ecl136II GAGCTC 1 cut(s) 69
EclXI CGGCCG 1 cut(s) 93
Eco130I CCWWGG 6 cut(s) 72, 528, 563, 1227, 1916, 2025
Eco24I GRGCYC 2 cut(s) 71, 1015
Eco31I GGTCTC 1 cut(s) 2046
Eco47I GGWCC 1 cut(s) 1925
Eco47III AGCGCT 1 cut(s) 1431
Eco52I CGGCCG 1 cut(s) 93
Eco53kI GAGCTC 1 cut(s) 69
Eco57I CTGAAG 3 cut(s) 264, 671, 721
Eco81I CCTNAGG 1 cut(s) 1803
Eco88I CYCGRG 2 cut(s) 1248, 1613
EcoICRI GAGCTC 1 cut(s) 69
EcoRI GAATTC 2 cut(s) 289, 1842
EcoRII CCWGG 2 cut(s) 1117, 1653
EcoT14I CCWWGG 6 cut(s) 72, 528, 563, 1227, 1916, 2025
EcoT38I GRGCYC 2 cut(s) 71, 1015
ErhI CCWWGG 6 cut(s) 72, 528, 563, 1227, 1916, 2025
Esp3I CGTCTC 1 cut(s) 93
FalI AAGNNNNNCTT 6 cut(s) 912, 944, 1831, 1863, 2104, 2136
FauNDI CATATG 1 cut(s) 1634
FblI GTMKAC 2 cut(s) 107, 2038
Fnu4HI GCNGC 9 cut(s) 59, 96, 156, 159, 975, 996, 1422, 1934, 1944
FokI GGATG 4 cut(s) 1210, 1652, 1859, 2042
FriOI GRGCYC 2 cut(s) 71, 1015
Fsp4HI GCNGC 9 cut(s) 59, 96, 156, 159, 975, 996, 1422, 1934, 1944
FspBI CTAG 6 cut(s) 476, 692, 914, 1940, 2001, 2061
GlaI GCGC 1 cut(s) 1431
GluI GCNGC 9 cut(s) 59, 96, 156, 159, 975, 996, 1422, 1934, 1944
GsuI CTGGAG 2 cut(s) 1741, 1977
HaeII RGCGCY 1 cut(s) 1433
HaeIII GGCC 1 cut(s) 95
HapII CCGG 6 cut(s) 39, 92, 308, 773, 1830, 2056
HgaI GACGC 2 cut(s) 75, 102
HhaI GCGC 1 cut(s) 1432
Hin1I GRCGYC 1 cut(s) 113
Hin6I GCGC 1 cut(s) 1430
HinP1I GCGC 1 cut(s) 1430
HincII GTYRAC 2 cut(s) 108, 2006
HindII GTYRAC 2 cut(s) 108, 2006
HindIII AAGCTT 1 cut(s) 448
HpaII CCGG 6 cut(s) 39, 92, 308, 773, 1830, 2056
HphI GGTGA 1 cut(s) 2089
Hpy166II GTNNAC 4 cut(s) 108, 1138, 2006, 2039
Hpy8I GTNNAC 4 cut(s) 108, 1138, 2006, 2039
Hpy99I CGWCG 3 cut(s) 103, 112, 118
HpyAV CCTTC 8 cut(s) 205, 415, 476, 762, 803, 1857, 2040, 2100
HpyCH4III ACNGT 5 cut(s) 517, 1164, 1279, 1292, 2136
HpyCH4IV ACGT 2 cut(s) 1888, 2067
HpyF10VI GCNNNNNNNGC 5 cut(s) 92, 1025, 1301, 1421, 1427
HpyF3I CTNAG 7 cut(s) 708, 1206, 1325, 1509, 1560, 1710, 1803
HpySE526I ACGT 2 cut(s) 1888, 2067
Hsp92I GRCGYC 1 cut(s) 113
HspAI GCGC 1 cut(s) 1430
Kpn2I TCCGGA 1 cut(s) 307
KpnI GGTACC 1 cut(s) 1965
Kzo9I GATC 9 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
LguI GCTCTTC 1 cut(s) 182
LmnI GCTCC 8 cut(s) 74, 231, 245, 310, 591, 982, 1180, 1340
Lsp1109I GCAGC 6 cut(s) 45, 142, 961, 982, 1433, 1920
LweI GCATC 4 cut(s) 402, 1630, 1679, 1881
MaeI CTAG 6 cut(s) 476, 692, 914, 1940, 2001, 2061
MaeII ACGT 2 cut(s) 1888, 2067
MaeIII GTNAC 6 cut(s) 19, 424, 554, 1279, 1328, 1591
MalI GATC 9 cut(s) 816, 1116, 1147, 1665, 1730, 1764, 1862, 1902, 1914
MboI GATC 9 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
MfeI CAATTG 1 cut(s) 790
MflI RGATCY 7 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1912
MhlI GDGCHC 3 cut(s) 71, 584, 1015
MlyI GAGTC 8 cut(s) 488, 951, 1391, 1748, 1902, 1990, 2111, 2141
MmeI TCCRAC 2 cut(s) 651, 1888
MroI TCCGGA 1 cut(s) 307
MroXI GAANNNNTTC 1 cut(s) 1846
MseI TTAA 4 cut(s) 1068, 1169, 1434, 2073
MslI CAYNNNNRTG 2 cut(s) 1862, 2102
MspA1I CMGCKG 2 cut(s) 58, 1394
MspI CCGG 6 cut(s) 39, 92, 308, 773, 1830, 2056
MspR9I CCNGG 4 cut(s) 774, 1119, 1655, 2057
MunI CAATTG 1 cut(s) 790
Mva1269I GAATGC 3 cut(s) 747, 1028, 1887
MvaI CCWGG 2 cut(s) 1119, 1655
MvnI CGCG 2 cut(s) 98, 1905
MwoI GCNNNNNNNGC 5 cut(s) 92, 1025, 1301, 1421, 1427
NciI CCSGG 2 cut(s) 774, 2057
NcoI CCATGG 3 cut(s) 72, 563, 1227
NdeI CATATG 1 cut(s) 1634
NdeII GATC 9 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
NheI GCTAGC 1 cut(s) 691
NlaIV GGNNCC 7 cut(s) 43, 306, 1342, 1800, 1963, 2109, 2143
NmuCI GTSAC 3 cut(s) 19, 424, 1591
NspI RCATGY 1 cut(s) 1336
NspV TTCGAA 1 cut(s) 455
PaeR7I CTCGAG 1 cut(s) 1248
PagI TCATGA 1 cut(s) 519
PaqCI CACCTGC 1 cut(s) 1102
PciSI GCTCTTC 1 cut(s) 182
PctI GAATGC 3 cut(s) 747, 1028, 1887
PdmI GAANNNNTTC 1 cut(s) 1846
PfeI GAWTC 9 cut(s) 145, 331, 571, 827, 1052, 1085, 1244, 1472, 1808
PflFI GACNNNGTC 2 cut(s) 103, 112
PflMI CCANNNNNTGG 1 cut(s) 1922
PkrI GCNGC 9 cut(s) 60, 97, 157, 160, 976, 997, 1423, 1935, 1945
PleI GAGTC 8 cut(s) 487, 950, 1390, 1748, 1901, 1989, 2111, 2141
PpsI GAGTC 8 cut(s) 487, 950, 1390, 1748, 1901, 1989, 2111, 2141
Ppu21I YACGTR 1 cut(s) 1889
Psp124BI GAGCTC 1 cut(s) 71
Psp6I CCWGG 2 cut(s) 1117, 1653
PspGI CCWGG 2 cut(s) 1117, 1653
PspN4I GGNNCC 7 cut(s) 43, 306, 1342, 1800, 1963, 2109, 2143
PspPI GGNCC 1 cut(s) 1925
PsuI RGATCY 7 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1912
PsyI GACNNNGTC 2 cut(s) 103, 112
PvuII CAGCTG 1 cut(s) 1394
RsaI GTAC 7 cut(s) 514, 1139, 1219, 1289, 1575, 1691, 1963
RsaNI GTAC 7 cut(s) 513, 1138, 1218, 1288, 1574, 1690, 1962
RseI CAYNNNNRTG 2 cut(s) 1862, 2102
SacI GAGCTC 1 cut(s) 71
SalI GTCGAC 1 cut(s) 106
SapI GCTCTTC 1 cut(s) 182
SaqAI TTAA 4 cut(s) 1068, 1169, 1434, 2073
SatI GCNGC 9 cut(s) 59, 96, 156, 159, 975, 996, 1422, 1934, 1944
Sau3AI GATC 9 cut(s) 814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
Sau96I GGNCC 1 cut(s) 1925
SchI GAGTC 8 cut(s) 488, 951, 1391, 1748, 1902, 1990, 2111, 2141
ScrFI CCNGG 4 cut(s) 774, 1119, 1655, 2057
SduI GDGCHC 3 cut(s) 71, 584, 1015
SfaNI GCATC 4 cut(s) 402, 1630, 1679, 1881
SfcI CTRYAG 3 cut(s) 235, 1098, 1410
Sfr274I CTCGAG 1 cut(s) 1248
SfuI TTCGAA 1 cut(s) 455
SinI GGWCC 1 cut(s) 1925
SlaI CTCGAG 1 cut(s) 1248
SmiMI CAYNNNNRTG 2 cut(s) 1862, 2102
SmlI CTYRAG 1 cut(s) 1248
SmoI CTYRAG 1 cut(s) 1248
SsiI CCGC 6 cut(s) 56, 61, 96, 159, 770, 1944
SspI AATATT 3 cut(s) 274, 1174, 1487
SspMI CTAG 6 cut(s) 476, 692, 914, 1940, 2001, 2061
SstI GAGCTC 1 cut(s) 71
StyD4I CCNGG 4 cut(s) 772, 1117, 1653, 2055
StyI CCWWGG 6 cut(s) 72, 528, 563, 1227, 1916, 2025
TaaI ACNGT 5 cut(s) 517, 1164, 1279, 1292, 2136
TaiI ACGT 2 cut(s) 1891, 2070
TaqI TCGA 6 cut(s) 107, 396, 455, 549, 1249, 1380
TaqII GACCGA 1 cut(s) 1565
TatI WGTACW 1 cut(s) 1689
TauI GCSGC 3 cut(s) 98, 161, 1946
TfiI GAWTC 9 cut(s) 145, 331, 571, 827, 1052, 1085, 1244, 1472, 1808
Tru1I TTAA 4 cut(s) 1068, 1169, 1434, 2073
Tru9I TTAA 4 cut(s) 1068, 1169, 1434, 2073
TscAI CASTG 5 cut(s) 369, 903, 1650, 2001, 2139
TseFI GTSAC 3 cut(s) 19, 424, 1591
TseI GCWGC 6 cut(s) 58, 155, 974, 995, 1421, 1933
Tsp45I GTSAC 3 cut(s) 19, 424, 1591
TspGWI ACGGA 3 cut(s) 1158, 1482, 1865
TspRI CASTG 5 cut(s) 369, 903, 1650, 2001, 2139
Tth111I GACNNNGTC 2 cut(s) 103, 112
Van91I CCANNNNNTGG 1 cut(s) 1922
VpaK11BI GGWCC 1 cut(s) 1925
XapI RAATTY 4 cut(s) 49, 289, 1842, 2020
XceI RCATGY 1 cut(s) 1336
XcmI CCANNNNNNNNNTGG 2 cut(s) 1526, 2101
XhoI CTCGAG 1 cut(s) 1248
XmiI GTMKAC 2 cut(s) 107, 2038
XmnI GAANNNNTTC 1 cut(s) 1846
XspI CTAG 6 cut(s) 476, 692, 914, 1940, 2001, 2061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.