Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0001818

Physical Location & Seq

Genomic Coordinates Forward (+)

23479564 .. 23484406

Gene Structure 4843 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g20460.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3201 bp

ATGGCGGTTGTCACCGGAGATCGATACCTGGAGAAGCTAGTCCACTTCGTGGAGCAGCAGGCCGGTTCGTTGATCGACGGGAGCCTAGTGCTGAAGCTGAACCCGGCTGGATTCCACTACGTCAACTCCCGGCTCGAGGCCTTGCACGAGCTCGAGAGCCTCCTCGCCGGCGCTCCCGTCGATTACCTCCGCGCCTACGTCTCCGACCTTGGAGACCACCGCGCGCTCGAGCAGCTGAGGAGGATTCTCAGGCTCTTGACATCCCTCAAGGTCGTTTCGGTGCTGCCGCCTTCCGCCAGGGACCCTACGCCGCTGTCGTTTTGGCCGTTTGGGAGGCTTAAGGTTTTGGAGCTTCGAGGATGCGATTTATCCACCTCCGCCGCGAAAGGTTTGCTCGAGCTGCGGCACACCTTGGAGAAGATCATTTGCCATAATTCTACAGATGCTCTGCGGCATGTGTTTGCGAGTAGAATTGCAGAGATTAAGGACTCGCCGCAGTGGAACCGCCTGTCATTCGTTTCGTGTGCTTGTAATGGCTTGGTTCTCATGGATGAGTCTTTGCAACTTCTTCCTGCTGTCGAAACTCTCGACCTTAGCCGGAACAAGTTTGCAAAGGTTGATAATCTTCGCAAGTGTGTCAAATTGAAGCACCTAGACCTCGGTTTCAATCAGCTCAGAACGATTTCGTCATTTGGTCAGGTCACGTGCCGTTTACTTAAACTTGTTTTGAGGAACAATGCTATAACTACATTGCGTGGGATTGAGAATTTGAAGTCACTGGAAGGGCTTGATGCTTCCTACAATATTCTTTCCAATTTTTCGGAGTTAGAATACCTTTCTGGACTTCGATCTCTCGAAAACTTGTGGTTGGAAGGGAATCCATTATGTTGTGCCAGTTGGTATCGGTCACAAGCATTCAGCTATGTCACTAATCCAGAAAAATTGAAGTTAGATGATAAGGAGATCAGCACCAGAGAATTTTGGAAGAGGCAACTTATTATTGCTAGCAGGCACAAGCGACCTGCCAGCTTTGGGTTTTATTCTCCTGCAAAGTGCGATGATAAAGGAGATTCAATTATTAACAAAAAAAGGAAAAAGGTATCTCGTCTTGCATCAATTGTTAATGAAGAGGAGAACACATGTTCTGACCAGGACTCTGTGTCTTGTGACAATGAGATTCAAAGCAGAGAGGATGGTGTCATATCTGACGATGAAGCTGAAATTGTTGATTTGATGACTAGAGTTGAGCTAATGAAGAAAGAGCGCTCCGTTCTTTGGTTGCGGGAGTTCAAGGAATGGTTAGATCGTGCTTCTGAGAATGATGCAGACATCAGTAGATATAGCAGGGCTAGATTGCATCTTGAGAAGGAAAACTATATAAAAAACAAGGCAAGTTGGAGGCAGCTAGGTGAAAAATCAACATATGTTCAAGCATCAGGAGACGAGAGTAGTACAAATGTTTTAGAATCAATGGGGAATGCTGGTAGGGTCGGCCCAGTTGGCATGGATAGTAGAGATATCGGGGAGAACTTAAAAGCATATTCGTATGAAGGGACAAGTACTTTCAGTTCAGAGGCTAAAAGTTCCCATACTCAGACATTCACCACTGATGGAGGTCATAGGATGGTCCAAAATTTGAGTATGTCTGCATTGTCTGTCATTGATGATATTTCAGAGTCTTATTCATCATCTGCTAACCCAGGATCACCGCCCCATTATCAAAAGGACATTCTCCATCGTCGACATAACTTAGAGGAGGAAATTTTACAGTTATCCGCAGAGTCTTATTCAGTGGCATCATCTGATAGTAATACCAGCTCAAGTGAAGATGAAAATTGTGAATCTAGGCAGTCGGTTCCTGAGAACTTGTTGAATGAGAGTGCCGAAGAATACCCATCTAAAAATTGTTTCAAGTATTATGACATAAAACATGAGGTTGACAGATGTTCGGTCGGCGTACGTGCCAGTGACATTCCTGCTGATGCTCATGATGTTGAAATTACTAATTGCATTAATGAAGAGGGTGATTTGCCGGAGAGGAGGAAAGGAAGACAGAGGACTAAAAGAAGAGTTATCGCTCTAGTAGAAGATGATAACATGATTAGGCAAGCAGAACTGTCACCAAAATCAAATGGCAATCTAGATAATCATGTAGGGCAAATCGAAAATAAGCAAGAGAATAAATATTTCTATGGGAGTGATTTTCAAGAAGTTGTTGATAAGAAACAGATGTTGGCAAATAGAAGCAGTGCCTCAATAACCGAAATCTTATCTTCAGGAAGTGATGAATTTATTGAGAATTATTTCAATACAAATATCGCAGATTCACGAAATCACGAGATATGTAGGCAGTATTTGTGTTGCTGTTGTGTACTTGAGCGGGATTTTCTTTCCCGAGAAAGAGAAGTTGCTGTTGTACTTAGTAGTGAAGACAAGCTTTATGTACTGGCCATTGGTATTGCAGGAGATGGGTCAGGCACCATCTTAAAGTTACAGGGTCGTCACAGGGTTGAGGATATCAGAGAAGTTGTAGTTGGTATAGGGCTTCAGGTTGTGAGGGTGTATGTAGGAGGCAGAGCGACTTACCTGTTTAAAACTAGAAGCATTGAAAAATCAAGACAGTTACTTTCTACTTTAAAAGTTATCGATTCTTTTGCCCCAAATGGAGAACTTTGCTTAAGAAGTTTGGAGCAGGTTCAGGTGGAGTTATTTGAGAAACAAATATGTGGAGGTTCAAAAGTGAGCATATTCCAGTATTCCATGGTACAGTTTTGGTGTAGTTATAATGAAGGTGAATCATGGTTTTCAAGATCATTATTTGTGGCTGGAGGGCACGTATTTTTGTGCTTTGAAGACCTTATGCAGTTCAGCTCTTCATGCATGGATGCGTCTTTGCCCCCATATTTTTCACTTGACTTGTGTTGCTCTATTGCCGACATATCTGAATTGGTTGTCGATGTCAGAGAAAGTCGGTGTGTAACCATAGCTGTTGCGTGTGCAATGTCGGAGTTCTGCCCTCCAGGCTCAGCCGGAGCGGGCAATTCAGACTCAAGTGTAAATGATAAAAAGATTGCTCCAGGCTCCATGACTTGGAAGCTCCAGTGGTTTTCCGACGAGAGTCCGTTCAAGTTTGTGGCGTTGTTGAAGGCAATCCATGAAGGGATGACCGCTTCCCCCTTGCTTGTAAGATGTATATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_4

Protein Analysis

1067

Amino Acids

119.65

Weight (kDa)

5.6

Isoelectric Point (pI)

49.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001818)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48540 AT1G48540 AT1G48540 AT3G17920 AT3G17920 AT3G17920
fragaria_vesca	FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490 FvH4_5g17490
malus_domestica	MD06G1228300.v1.1 MD14G1237500.v1.1
prunus_persica	Prupe.5G234800_v2.0.a1 Prupe.5G234800_v2.0.a1 Prupe.5G234800_v2.0.a1 Prupe.5G234800_v2.0.a1 Prupe.5G234800_v2.0.a1 Prupe.5G234800_v2.0.a1 Prupe.5G234800_v2.0.a1 Prupe.5G234800_v2.0.a1
pyrus_communis	pycom06g20460 pycom14g19870
rosa_chinensis	RchiOBHm_Chr7g0178201
rosa_laevigata	RLG00000005464
rosa_roxburghii	Rroxscaffold_3G00275090
rosa_rugosa	Rorug06G0414200 Rorug06G0414300 Rorug06G0414400 Rorug06G0414500
rosa_samantha	Rh7AG013700 Rh7BG013500 Rh7CG013400 Rh7DG013700
rosa_wichuraiana	Rw7G001090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2784
Acc36I	ACCTGC	2 cut(s)	1030, 2683
AccB1I	GGYRCC	1 cut(s)	2477
AccB7I	CCANNNNNTGG	2 cut(s)	49, 3090
AccBSI	CCGCTC	2 cut(s)	2380, 3035
AccI	GTMKAC	1 cut(s)	1741
AccII	CGCG	4 cut(s)	192, 222, 224, 383
AclWI	GGATC	1 cut(s)	1711
AcoI	YGGCCR	2 cut(s)	323, 2448
AcsI	RAATTY	5 cut(s)	766, 977, 1633, 1761, 2288
AcuI	CTGAAG	3 cut(s)	113, 2259, 2531
AcvI	CACGTG	1 cut(s)	705
AdeI	CACNNNGTG	1 cut(s)	49
AfaI	GTAC	7 cut(s)	1453, 1561, 1959, 2373, 2418, 2445, 2766
AfeI	AGCGCT	1 cut(s)	1265
AfiI	CCNNNNNNNGG	5 cut(s)	49, 136, 1032, 1275, 3090
AflII	CTTAAG	2 cut(s)	338, 2677
AflIII	ACRYGT	1 cut(s)	1139
AhdI	GACNNNNNGTC	1 cut(s)	1159
AjnI	CCWGG	6 cut(s)	27, 296, 1149, 1699, 3019, 3076
AjuI	GAANNNNNNNTTGG	4 cut(s)	2216, 2248, 2517, 2549
Alw21I	GWGCWC	1 cut(s)	153
Alw26I	GTCTC	3 cut(s)	205, 207, 1434
AlwI	GGATC	1 cut(s)	1711
Ama87I	CYCGRG	5 cut(s)	134, 152, 227, 395, 2394
Aor51HI	AGCGCT	1 cut(s)	1265
AoxI	GGCC	5 cut(s)	60, 138, 323, 1492, 2448
ApeKI	GCWGC	5 cut(s)	55, 232, 283, 400, 1402
ApoI	RAATTY	5 cut(s)	766, 977, 1633, 1761, 2288
AseI	ATTAAT	1 cut(s)	2013
Asp700I	GAANNNNTTC	2 cut(s)	682, 2303
AspLEI	GCGC	5 cut(s)	173, 194, 224, 226, 1266
AspS9I	GGNCC	3 cut(s)	301, 1493, 1627
AsuC2I	CCSGG	2 cut(s)	104, 130
AsuHPI	GGTGA	7 cut(s)	4, 1421, 1594, 1698, 2036, 2112, 2804
AsuNHI	GCTAGC	1 cut(s)	1004
AvaI	CYCGRG	5 cut(s)	134, 152, 227, 395, 2394
AvaII	GGWCC	2 cut(s)	301, 1627
BaeGI	GKGCMC	1 cut(s)	2835
BalI	TGGCCA	1 cut(s)	2450
BanI	GGYRCC	1 cut(s)	2477
BanII	GRGCYC	1 cut(s)	153
BauI	CACGAG	2 cut(s)	146, 2336
BbrPI	CACGTG	1 cut(s)	705
BbsI	GAAGAC	3 cut(s)	2056, 2436, 2859
Bbv12I	GWGCWC	1 cut(s)	153
BbvCI	CCTCAGC	1 cut(s)	236
BbvI	GCAGC	5 cut(s)	67, 244, 270, 387, 1414
BccI	CCATC	7 cut(s)	1187, 1604, 1618, 1743, 1903, 2462, 2489
BceAI	ACGGC	2 cut(s)	310, 693
BcgI	CGANNNNNNTGC	4 cut(s)	373, 407, 2636, 2670
BciT130I	CCWGG	6 cut(s)	29, 298, 1151, 1701, 3021, 3078
BcnI	CCSGG	2 cut(s)	104, 130
BcoDI	GTCTC	3 cut(s)	205, 207, 1434
BfmI	CTRYAG	1 cut(s)	438
BfoI	RGCGCY	2 cut(s)	174, 1267
BfrI	CTTAAG	2 cut(s)	338, 2677
BfuAI	ACCTGC	2 cut(s)	1030, 2683
BglI	GCCNNNNNGGC	2 cut(s)	1500, 3021
BlpI	GCTNAGC	1 cut(s)	3025
BmcAI	AGTACT	1 cut(s)	1561
Bme1390I	CCNGG	8 cut(s)	29, 104, 130, 298, 1151, 1701, 3021, 3078
Bme18I	GGWCC	2 cut(s)	301, 1627
BmeRI	GACNNNNNGTC	1 cut(s)	1159
BmeT110I	CYCGRG	5 cut(s)	134, 152, 227, 395, 2394
BmgT120I	GGNCC	3 cut(s)	301, 1493, 1627
BmiI	GGNNCC	7 cut(s)	83, 302, 303, 503, 1857, 2479, 3082
BmrFI	CCNGG	8 cut(s)	29, 104, 130, 298, 1151, 1701, 3021, 3078
BmrI	ACTGGG	1 cut(s)	1490
BmtI	GCTAGC	1 cut(s)	1008
BmuI	ACTGGG	1 cut(s)	1490
BoxI	GACNNNNGTC	1 cut(s)	3117
BpiI	GAAGAC	3 cut(s)	2056, 2436, 2859
BpmI	CTGGAG	5 cut(s)	50, 2847, 3003, 3060, 3083
Bpu10I	CCTNAGC	2 cut(s)	236, 593
Bpu1102I	GCTNAGC	1 cut(s)	3025
BpuEI	CTTGAG	5 cut(s)	251, 1382, 1804, 2396, 3034
BpuMI	CCSGG	2 cut(s)	104, 130
Bsa29I	ATCGAT	2 cut(s)	22, 2646
BsaAI	YACGTR	3 cut(s)	705, 1961, 2836
BsaBI	GATNNNNATC	1 cut(s)	3193
BsaI	GGTCTC	1 cut(s)	207
BsaJI	CCNNGG	6 cut(s)	208, 297, 411, 658, 1699, 2760
BsaWI	WCCGGW	1 cut(s)	14
BsaXI	ACNNNNNCTCC	4 cut(s)	110, 140, 2820, 2850
Bsc4I	CCNNNNNNNGG	5 cut(s)	49, 136, 1032, 1275, 3090
Bse118I	RCCGGY	2 cut(s)	62, 167
Bse1I	ACTGG	7 cut(s)	783, 894, 1496, 1965, 2451, 2752, 3100
Bse3DI	GCAATG	2 cut(s)	749, 3006
Bse8I	GATNNNNATC	1 cut(s)	3193
BseBI	CCWGG	6 cut(s)	29, 298, 1151, 1701, 3021, 3078
BseCI	ATCGAT	2 cut(s)	22, 2646
BseDI	CCNNGG	6 cut(s)	208, 297, 411, 658, 1699, 2760
BseGI	GGATG	7 cut(s)	260, 365, 556, 1198, 1629, 2890, 3168
BseJI	GATNNNNATC	1 cut(s)	3193
BseLI	CCNNNNNNNGG	5 cut(s)	49, 136, 1032, 1275, 3090
BseMI	GCAATG	2 cut(s)	749, 3006
BseMII	CTCAG	7 cut(s)	227, 262, 688, 1305, 1607, 1851, 3039
BseNI	ACTGG	7 cut(s)	783, 894, 1496, 1965, 2451, 2752, 3100
BsePI	GCGCGC	1 cut(s)	222
BseRI	GAGGAG	5 cut(s)	152, 253, 1145, 1769, 2053
BseSI	GKGCMC	1 cut(s)	2835
BseXI	GCAGC	5 cut(s)	67, 244, 270, 387, 1414
Bsh1236I	CGCG	4 cut(s)	192, 222, 224, 383
Bsh1285I	CGRYCG	1 cut(s)	1953
BshFI	GGCC	5 cut(s)	62, 140, 325, 1494, 2450
BshNI	GGYRCC	1 cut(s)	2477
BshVI	ATCGAT	2 cut(s)	22, 2646
BsiEI	CGRYCG	1 cut(s)	1953
BsiHKAI	GWGCWC	1 cut(s)	153
BsiHKCI	CYCGRG	5 cut(s)	134, 152, 227, 395, 2394
BsiSI	CCGG	8 cut(s)	15, 63, 104, 130, 168, 598, 2033, 3030
BsiWI	CGTACG	1 cut(s)	1957
BslFI	GGGAC	2 cut(s)	314, 1567
BslI	CCNNNNNNNGG	5 cut(s)	49, 136, 1032, 1275, 3090
BsmAI	GTCTC	3 cut(s)	205, 207, 1434
BsmBI	CGTCTC	2 cut(s)	205, 1434
BsmFI	GGGAC	2 cut(s)	314, 1567
BsmI	GAATGC	2 cut(s)	914, 1483
BsnI	GGCC	5 cut(s)	62, 140, 325, 1494, 2450
Bso31I	GGTCTC	1 cut(s)	207
BsoBI	CYCGRG	5 cut(s)	134, 152, 227, 395, 2394
Bsp1286I	GDGCHC	2 cut(s)	153, 2835
Bsp143I	GATC	8 cut(s)	19, 72, 420, 848, 963, 1303, 1703, 2810
Bsp1720I	GCTNAGC	1 cut(s)	3025
Bsp19I	CCATGG	1 cut(s)	2760
BspANI	GGCC	5 cut(s)	62, 140, 325, 1494, 2450
BspCNI	CTCAG	7 cut(s)	228, 261, 687, 1306, 1606, 1852, 3038
BspDI	ATCGAT	2 cut(s)	22, 2646
BspFNI	CGCG	4 cut(s)	192, 222, 224, 383
BspHI	TCATGA	1 cut(s)	1987
BspLI	GGNNCC	7 cut(s)	83, 302, 303, 503, 1857, 2479, 3082
BspMI	ACCTGC	2 cut(s)	1030, 2683
BspOI	GCTAGC	1 cut(s)	1008
BspPI	GGATC	1 cut(s)	1711
BspQI	GCTCTTC	1 cut(s)	2878
BspT107I	GGYRCC	1 cut(s)	2477
BspTI	CTTAAG	2 cut(s)	338, 2677
BspTNI	GGTCTC	1 cut(s)	207
BsrBI	CCGCTC	2 cut(s)	2380, 3035
BsrDI	GCAATG	2 cut(s)	749, 3006
BsrFI	RCCGGY	2 cut(s)	62, 167
BsrI	ACTGG	7 cut(s)	783, 894, 1496, 1965, 2451, 2752, 3100
BssAI	RCCGGY	2 cut(s)	62, 167
BssECI	CCNNGG	6 cut(s)	208, 297, 411, 658, 1699, 2760
BssHII	GCGCGC	1 cut(s)	222
BssMI	GATC	8 cut(s)	19, 72, 420, 848, 963, 1303, 1703, 2810
BssSI	CACGAG	2 cut(s)	146, 2336
BssT1I	CCWWGG	3 cut(s)	208, 411, 2760
Bst2BI	CACGAG	2 cut(s)	146, 2336
Bst2UI	CCWGG	6 cut(s)	29, 298, 1151, 1701, 3021, 3078
Bst4CI	ACNGT	4 cut(s)	1770, 2118, 2622, 2769
Bst6I	CTCTTC	5 cut(s)	980, 1122, 2013, 2062, 2878
BstAFI	CTTAAG	2 cut(s)	338, 2677
BstBAI	YACGTR	3 cut(s)	705, 1961, 2836
BstC8I	GCNNGC	8 cut(s)	60, 169, 224, 1006, 1010, 1027, 2109, 3037
BstDSI	CCRYGG	1 cut(s)	2760
BstF5I	GGATG	7 cut(s)	260, 365, 556, 1198, 1629, 2890, 3168
BstFNI	CGCG	4 cut(s)	192, 222, 224, 383
BstH2I	RGCGCY	2 cut(s)	174, 1267
BstHHI	GCGC	5 cut(s)	173, 194, 224, 226, 1266
BstKTI	GATC	8 cut(s)	22, 75, 423, 851, 966, 1306, 1706, 2813
BstMAI	GTCTC	3 cut(s)	205, 207, 1434
BstMBI	GATC	8 cut(s)	19, 72, 420, 848, 963, 1303, 1703, 2810
BstMCI	CGRYCG	1 cut(s)	1953
BstMWI	GCNNNNNNNGC	5 cut(s)	232, 400, 1500, 2877, 3021
BstNI	CCWGG	6 cut(s)	29, 298, 1151, 1701, 3021, 3078
BstNSI	RCATGY	2 cut(s)	458, 1143
BstPAI	GACNNNNGTC	1 cut(s)	3117
BstSCI	CCNGG	8 cut(s)	27, 102, 128, 296, 1149, 1699, 3019, 3076
BstSFI	CTRYAG	1 cut(s)	438
BstSLI	GKGCMC	1 cut(s)	2835
BstUI	CGCG	4 cut(s)	192, 222, 224, 383
BstV1I	GCAGC	5 cut(s)	67, 244, 270, 387, 1414
BstV2I	GAAGAC	3 cut(s)	2056, 2436, 2859
Bsu15I	ATCGAT	2 cut(s)	22, 2646
BsuRI	GGCC	5 cut(s)	62, 140, 325, 1494, 2450
BsuTUI	ATCGAT	2 cut(s)	22, 2646
BtgI	CCRYGG	1 cut(s)	2760
BtgZI	GCGATG	1 cut(s)	1071
BtsCI	GGATG	7 cut(s)	260, 365, 556, 1198, 1629, 2890, 3168
BtsI	GCAGTG	2 cut(s)	503, 2254
BtsIMutI	CAGTG	7 cut(s)	503, 776, 1605, 1797, 1972, 2254, 3107
BveI	ACCTGC	2 cut(s)	1030, 2683
Cac8I	GCNNGC	8 cut(s)	60, 169, 224, 1006, 1010, 1027, 2109, 3037
CciI	TCATGA	1 cut(s)	1987
CfoI	GCGC	5 cut(s)	173, 194, 224, 226, 1266
Cfr10I	RCCGGY	2 cut(s)	62, 167
Cfr13I	GGNCC	3 cut(s)	301, 1493, 1627
ClaI	ATCGAT	2 cut(s)	22, 2646
CseI	GACGC	1 cut(s)	2877
Csp6I	GTAC	7 cut(s)	1452, 1560, 1958, 2372, 2417, 2444, 2765
CviQI	GTAC	7 cut(s)	1452, 1560, 1958, 2372, 2417, 2444, 2765
DpnI	GATC	8 cut(s)	21, 74, 422, 850, 965, 1305, 1705, 2812
DpnII	GATC	8 cut(s)	19, 72, 420, 848, 963, 1303, 1703, 2810
DraI	TTTAAA	2 cut(s)	2593, 2637
DraIII	CACNNNGTG	1 cut(s)	49
DriI	GACNNNNNGTC	1 cut(s)	1159
EaeI	YGGCCR	2 cut(s)	323, 2448
Eam1104I	CTCTTC	5 cut(s)	980, 1122, 2013, 2062, 2878
Eam1105I	GACNNNNNGTC	1 cut(s)	1159
EarI	CTCTTC	5 cut(s)	980, 1122, 2013, 2062, 2878
EciI	GGCGGA	2 cut(s)	283, 367
Ecl136II	GAGCTC	1 cut(s)	151
Eco130I	CCWWGG	3 cut(s)	208, 411, 2760
Eco147I	AGGCCT	1 cut(s)	140
Eco24I	GRGCYC	1 cut(s)	153
Eco31I	GGTCTC	1 cut(s)	207
Eco32I	GATATC	2 cut(s)	1519, 2518
Eco47I	GGWCC	2 cut(s)	301, 1627
Eco47III	AGCGCT	1 cut(s)	1265
Eco53kI	GAGCTC	1 cut(s)	151
Eco57I	CTGAAG	3 cut(s)	113, 2259, 2531
Eco72I	CACGTG	1 cut(s)	705
Eco88I	CYCGRG	5 cut(s)	134, 152, 227, 395, 2394
EcoICRI	GAGCTC	1 cut(s)	151
EcoO109I	RGGNCCY	1 cut(s)	301
EcoRII	CCWGG	6 cut(s)	27, 296, 1149, 1699, 3019, 3076
EcoRV	GATATC	2 cut(s)	1519, 2518
EcoT14I	CCWWGG	3 cut(s)	208, 411, 2760
EcoT22I	ATGCAT	1 cut(s)	2882
EcoT38I	GRGCYC	1 cut(s)	153
ErhI	CCWWGG	3 cut(s)	208, 411, 2760
Esp3I	CGTCTC	2 cut(s)	205, 1434
FalI	AAGNNNNNCTT	2 cut(s)	2421, 2453
FaqI	GGGAC	2 cut(s)	314, 1567
FauI	CCCGC	3 cut(s)	1275, 2373, 3028
FauNDI	CATATG	1 cut(s)	1423
FblI	GTMKAC	1 cut(s)	1741
FokI	GGATG	7 cut(s)	247, 372, 563, 1205, 1636, 2897, 3175
FriOI	GRGCYC	1 cut(s)	153
GlaI	GCGC	5 cut(s)	172, 193, 223, 225, 1265
GsuI	CTGGAG	5 cut(s)	50, 2847, 3003, 3060, 3083
HaeII	RGCGCY	2 cut(s)	174, 1267
HaeIII	GGCC	5 cut(s)	62, 140, 325, 1494, 2450
HapII	CCGG	8 cut(s)	15, 63, 104, 130, 168, 598, 2033, 3030
HgaI	GACGC	1 cut(s)	2877
HhaI	GCGC	5 cut(s)	173, 194, 224, 226, 1266
Hin6I	GCGC	5 cut(s)	171, 192, 222, 224, 1264
HinP1I	GCGC	5 cut(s)	171, 192, 222, 224, 1264
HincII	GTYRAC	3 cut(s)	124, 1742, 1939
HindII	GTYRAC	3 cut(s)	124, 1742, 1939
HindIII	AAGCTT	1 cut(s)	2435
HpaII	CCGG	8 cut(s)	15, 63, 104, 130, 168, 598, 2033, 3030
HphI	GGTGA	7 cut(s)	4, 1421, 1594, 1698, 2036, 2112, 2804
Hpy166II	GTNNAC	6 cut(s)	43, 124, 713, 1742, 1939, 2372
Hpy8I	GTNNAC	6 cut(s)	43, 124, 713, 1742, 1939, 2372
Hpy99I	CGWCG	4 cut(s)	80, 182, 1743, 3116
HpyAV	CCTTC	8 cut(s)	300, 776, 866, 1360, 1544, 2783, 3139, 3152
HpyCH4III	ACNGT	4 cut(s)	1770, 2118, 2622, 2769
HpyCH4IV	ACGT	5 cut(s)	120, 198, 704, 1960, 2835
HpyF10VI	GCNNNNNNNGC	5 cut(s)	232, 400, 1500, 2877, 3021
HpySE526I	ACGT	5 cut(s)	120, 198, 704, 1960, 2835
HspAI	GCGC	5 cut(s)	171, 192, 222, 224, 1264
KflI	GGGWCCC	1 cut(s)	301
KroI	GCCGGC	1 cut(s)	167
KroNI	GCCGGC	1 cut(s)	169
Kzo9I	GATC	8 cut(s)	19, 72, 420, 848, 963, 1303, 1703, 2810
LguI	GCTCTTC	1 cut(s)	2878
Lsp1109I	GCAGC	5 cut(s)	67, 244, 270, 387, 1414
MaeII	ACGT	5 cut(s)	120, 198, 704, 1960, 2835
MalI	GATC	8 cut(s)	21, 74, 422, 850, 965, 1305, 1705, 2812
MbiI	CCGCTC	2 cut(s)	2380, 3035
MboI	GATC	8 cut(s)	19, 72, 420, 848, 963, 1303, 1703, 2810
MfeI	CAATTG	1 cut(s)	1116
MhlI	GDGCHC	2 cut(s)	153, 2835
MlsI	TGGCCA	1 cut(s)	2450
MluNI	TGGCCA	1 cut(s)	2450
MlyI	GAGTC	7 cut(s)	482, 563, 1148, 1685, 1790, 3041, 3127
MmeI	TCCRAC	5 cut(s)	228, 849, 1376, 2985, 3135
Mox20I	TGGCCA	1 cut(s)	2450
Mph1103I	ATGCAT	1 cut(s)	2882
MreI	CGCCGGCG	1 cut(s)	167
MroNI	GCCGGC	1 cut(s)	167
MroXI	GAANNNNTTC	2 cut(s)	682, 2303
MscI	TGGCCA	1 cut(s)	2450
Msp20I	TGGCCA	1 cut(s)	2450
MspA1I	CMGCKG	2 cut(s)	235, 313
MspCI	CTTAAG	2 cut(s)	338, 2677
MspI	CCGG	8 cut(s)	15, 63, 104, 130, 168, 598, 2033, 3030
MspR9I	CCNGG	8 cut(s)	29, 104, 130, 298, 1151, 1701, 3021, 3078
MunI	CAATTG	1 cut(s)	1116
Mva1269I	GAATGC	2 cut(s)	914, 1483
MvaI	CCWGG	6 cut(s)	29, 298, 1151, 1701, 3021, 3078
MvnI	CGCG	4 cut(s)	192, 222, 224, 383
MwoI	GCNNNNNNNGC	5 cut(s)	232, 400, 1500, 2877, 3021
NaeI	GCCGGC	1 cut(s)	169
NciI	CCSGG	2 cut(s)	104, 130
NcoI	CCATGG	1 cut(s)	2760
NdeI	CATATG	1 cut(s)	1423
NdeII	GATC	8 cut(s)	19, 72, 420, 848, 963, 1303, 1703, 2810
NgoMIV	GCCGGC	1 cut(s)	167
NheI	GCTAGC	1 cut(s)	1004
NlaIV	GGNNCC	7 cut(s)	83, 302, 303, 503, 1857, 2479, 3082
NmuCI	GTSAC	9 cut(s)	10, 700, 774, 906, 925, 1166, 1967, 2118, 2501
NsiI	ATGCAT	1 cut(s)	2882
NspI	RCATGY	2 cut(s)	458, 1143
PaeR7I	CTCGAG	4 cut(s)	134, 152, 227, 395
PagI	TCATGA	1 cut(s)	1987
PauI	GCGCGC	1 cut(s)	222
PceI	AGGCCT	1 cut(s)	140
PciI	ACATGT	1 cut(s)	1139
PciSI	GCTCTTC	1 cut(s)	2878
PcsI	WCGNNNNNNNCGW	3 cut(s)	314, 323, 585
PctI	GAATGC	2 cut(s)	914, 1483
PdiI	GCCGGC	1 cut(s)	169
PdmI	GAANNNNTTC	2 cut(s)	682, 2303
Pfl23II	CGTACG	1 cut(s)	1957
PflMI	CCANNNNNTGG	2 cut(s)	49, 3090
PleI	GAGTC	7 cut(s)	482, 562, 1148, 1684, 1789, 3041, 3126
PmaCI	CACGTG	1 cut(s)	705
PmlI	CACGTG	1 cut(s)	705
PpsI	GAGTC	7 cut(s)	482, 562, 1148, 1684, 1789, 3041, 3126
Ppu21I	YACGTR	3 cut(s)	705, 1961, 2836
PpuMI	RGGWCCY	1 cut(s)	301
PscI	ACATGT	1 cut(s)	1139
PshAI	GACNNNNGTC	1 cut(s)	3117
PshBI	ATTAAT	1 cut(s)	2013
PsiI	TTATAA	1 cut(s)	2784
Psp124BI	GAGCTC	1 cut(s)	153
Psp5II	RGGWCCY	1 cut(s)	301
Psp6I	CCWGG	6 cut(s)	27, 296, 1149, 1699, 3019, 3076
PspCI	CACGTG	1 cut(s)	705
PspGI	CCWGG	6 cut(s)	27, 296, 1149, 1699, 3019, 3076
PspLI	CGTACG	1 cut(s)	1957
PspN4I	GGNNCC	7 cut(s)	83, 302, 303, 503, 1857, 2479, 3082
PspPI	GGNCC	3 cut(s)	301, 1493, 1627
PspPPI	RGGWCCY	1 cut(s)	301
PspXI	VCTCGAGB	3 cut(s)	134, 227, 395
PsrI	GAACNNNNNNTAC	2 cut(s)	1552, 1584
PteI	GCGCGC	1 cut(s)	222
PvuII	CAGCTG	1 cut(s)	235
RsaI	GTAC	7 cut(s)	1453, 1561, 1959, 2373, 2418, 2445, 2766
RsaNI	GTAC	7 cut(s)	1452, 1560, 1958, 2372, 2417, 2444, 2765
SacI	GAGCTC	1 cut(s)	153
SalI	GTCGAC	1 cut(s)	1740
SapI	GCTCTTC	1 cut(s)	2878
Sau3AI	GATC	8 cut(s)	19, 72, 420, 848, 963, 1303, 1703, 2810
Sau96I	GGNCC	3 cut(s)	301, 1493, 1627
ScaI	AGTACT	1 cut(s)	1561
SchI	GAGTC	7 cut(s)	482, 563, 1148, 1685, 1790, 3041, 3127
ScrFI	CCNGG	8 cut(s)	29, 104, 130, 298, 1151, 1701, 3021, 3078
SduI	GDGCHC	2 cut(s)	153, 2835
SfcI	CTRYAG	1 cut(s)	438
Sfr274I	CTCGAG	4 cut(s)	134, 152, 227, 395
SgrAI	CRCCGGYG	1 cut(s)	167
SinI	GGWCC	2 cut(s)	301, 1627
SlaI	CTCGAG	4 cut(s)	134, 152, 227, 395
SseBI	AGGCCT	1 cut(s)	140
SspI	AATATT	2 cut(s)	805, 2186
SstI	GAGCTC	1 cut(s)	153
StuI	AGGCCT	1 cut(s)	140
StyD4I	CCNGG	8 cut(s)	27, 102, 128, 296, 1149, 1699, 3019, 3076
StyI	CCWWGG	3 cut(s)	208, 411, 2760
TaaI	ACNGT	4 cut(s)	1770, 2118, 2622, 2769
TaiI	ACGT	5 cut(s)	123, 201, 707, 1963, 2838
TaqII	GACCGA	2 cut(s)	894, 1939
TatI	WGTACW	5 cut(s)	1451, 1559, 2371, 2416, 2443
TauI	GCSGC	6 cut(s)	289, 313, 383, 406, 454, 496
TscAI	CASTG	7 cut(s)	503, 783, 1612, 1797, 1972, 2254, 3107
TseFI	GTSAC	9 cut(s)	10, 700, 774, 906, 925, 1166, 1967, 2118, 2501
TseI	GCWGC	5 cut(s)	55, 232, 283, 400, 1402
Tsp45I	GTSAC	9 cut(s)	10, 700, 774, 906, 925, 1166, 1967, 2118, 2501
TspGWI	ACGGA	2 cut(s)	1258, 3111
TspRI	CASTG	7 cut(s)	503, 783, 1612, 1797, 1972, 2254, 3107
Van91I	CCANNNNNTGG	2 cut(s)	49, 3090
Vha464I	CTTAAG	2 cut(s)	338, 2677
VpaK11BI	GGWCC	2 cut(s)	301, 1627
VspI	ATTAAT	1 cut(s)	2013
XapI	RAATTY	5 cut(s)	766, 977, 1633, 1761, 2288
XbaI	TCTAGA	1 cut(s)	2140
XceI	RCATGY	2 cut(s)	458, 1143
XhoI	CTCGAG	4 cut(s)	134, 152, 227, 395
XmiI	GTMKAC	1 cut(s)	1741
XmnI	GAANNNNTTC	2 cut(s)	682, 2303
ZrmI	AGTACT	1 cut(s)	1561
Zsp2I	ATGCAT	1 cut(s)	2882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.