Rorug06G0414400

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001818
Physical Location & Seq
Forward (+)
55490670 .. 55492637
1968 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0414400.1

Sequence Viewer

Length: 1968 bp
ATGAACTACGAGAACTACGACCCTTCCTTCCCTGACCAACCAGTAGTCGATCTCTACCTACCCTTATGGGCAAACCTTCCCGCCTTCCGGTACAAACCAGCCTTCATCTGGGTCGAAGATGACTCACCCGATCCAAAATGTGATCATAGCTCAACATCCCTCACATATTCTCAGCTCAATGAGTCAGTACAACACATTTCACATCATTTGCTATACACTCAACCACTTCAAAGACGTGACACTGTCATCATCCTATGCTCGCCAGGGCTTGAACTGGTTGAGATCATCTTCGCTAGCCAAAGAGCCGGCCTTTTGGCCGTGCCCATTTCCCCACCTGACCTTTCCTCCCCTAAACAAAACTACCACCACCTTGTCAGAGTCCTCTCCCAAACAAATCCCAAGGCCGCCATAGCTCACCCCTCTTACATCAGAGCCGTCCGTAACTTCATATCATTATCCTCCAATACAAAACTCGTGCACATGTTGGAGAATCTCCACTGGATATCCACTGATGATATCAAAACTACCGGAGCTAGACACTTGAATTTACAGTTCAGCCCTTCGCCTTACGAGGGCTGCACACCTGACGAGCTGTATTTGATTCAGTACACGTCAGGCACGATCGGGATCCCAAAGCCGGTCCTTGTCACCTCCGGCTCGGCAGCTCACAACGTTAGAACCGCAAGGAAATCCTACGACCTTCACCCAAACAGTGTGATCGTGTCGTGGCTACCTCAGTACCATGATTGCGGTCTTATGTTCTTGTTGTTGACCATTGTCTCCGGTGCGACGTGTGTTTTGACTTCGCCGAGGGCATTTGTCAAGAGGCCTAGAATTTGGCTCGAGCTTATAACAAACTTCAGCGCCACTTGCACTCCTGTTCCGTCGTTCACGCTGCCGCTGGTGGTGAAACGCGGCGGGGTTAAAAAGGGAACTTCCCCTATAAACTTGTGGAGCATGAAAAACCTGATTCTTATAAACGAGCCAATTTATAAAGACGCGGTGGATGAGTTTGTGGATATGTTTGGACCTTATGGGCTCAGCCCATCGTCTATTTCTCCATCTTACGGCCTAGCAGAGAACTGCACTTTTGTTTCAACTGCATGGAGATACAACTCTTCTAACGTTCCATCTCACAACAAGCTCTTGCCTAGTGCAAGGCTGGGGTATTCCAGAGAAGACGACGTCGTAAAGGAGGACATGGATATTGTCGTGGTGAACGAAGAGACGTGCGATGCCGTTGAGGATGGGATTGAAGGAGAGATTTGGGTTTCGTCTCCTAGTAATGCTTCTGGCTACTTGGGACACCCGTCCCTAACTCGTGAGGTGTATCACGGTAGACTTAGAAACAAGGTGACTTGCTGTTATGTACGGACGGGCGATAGAGGAGTCGTCAAAGGAGAAGAAAGGTTTCTTTACGTGACGGGACGGTGTGTGGACGTGATCAAACTCCAAAACGACCGGGAAATACATCCTCATTACATTGAAACGGCAGCTCAGAATAGTAGTCCGGAGTTTATCAGAGCGGGTTGTTTGGCTGCGTTGAAGATCGAGAACACGGTTGTGGTGGTTGCGGAGATGCAGAGGAGTGATCAGAATGATGTTAGGGTTTTGAGGAGGATATGTCAAGGGATAAGGGAGGGTGTGGTAAAGGAGGAGGGAGTTGAAGTTGGAGTGGTGGTTCTTGTTAAAAGTGGGGGCGTGCCCAAAACGACGTCGGGCAAAATACAACGATGGGCAGCTAAGGATACGCTTGTTGGAGGCAAAATGAGCGTTTTGATGGAGATGGGGTTCGGGGTTCATTATGCTTTTTCAACTTTTGGGAGGAGATCGCTTGATGAGGGAAGTAGTAAGGGTAAAAGTGAAGAGAGAAAGAGTGGAGGACAAAAGGTAGAAGTCAGAGATCAAGAAATCTCTTTCTCATTCTCGAGTGCTACAACTCGTCCCCCCTTGCTCTCTCTTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4

Protein Analysis

655

Amino Acids

72.73

Weight (kDa)

7.02

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP-binding PF00501 37 - 434 1e-52 AMP-binding enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 851, 977, 993
AatII GACGTC 2 cut(s) 1188, 1718
AccBSI CCGCTC 1 cut(s) 1526
AccI GTMKAC 1 cut(s) 1339
AccII CGCG 2 cut(s) 915, 1001
AccIII TCCGGA 1 cut(s) 1510
AclI AACGTT 2 cut(s) 672, 1125
AclWI GGATC 3 cut(s) 125, 622, 635
AcoI YGGCCR 1 cut(s) 315
AcsI RAATTY 2 cut(s) 544, 834
AcuI CTGAAG 1 cut(s) 844
AcyI GRCGYC 2 cut(s) 1185, 1715
AfaI GTAC 5 cut(s) 92, 189, 608, 740, 1371
AfiI CCNNNNNNNGG 5 cut(s) 87, 108, 572, 637, 1067
AflIII ACRYGT 3 cut(s) 480, 609, 791
AgsI TTSAA 9 cut(s) 230, 272, 544, 1098, 1256, 1487, 1546, 1667, 1815
AjiI CACGTC 5 cut(s) 236, 612, 792, 1230, 1441
AjnI CCWGG 1 cut(s) 262
AleI CACNNNNGTG 1 cut(s) 1562
AloI GAACNNNNNNTCC 4 cut(s) 1665, 1697, 1775, 1807
Alw21I GWGCWC 1 cut(s) 480
Alw26I GTCTC 3 cut(s) 784, 1220, 1281
Alw44I GTGCAC 1 cut(s) 476
AlwI GGATC 3 cut(s) 125, 622, 635
Ama87I CYCGRG 2 cut(s) 842, 1927
Aor13HI TCCGGA 1 cut(s) 1510
AoxI GGCC 5 cut(s) 307, 315, 402, 827, 1069
ApaLI GTGCAC 1 cut(s) 476
ApeKI GCWGC 6 cut(s) 576, 662, 895, 1493, 1538, 1739
ApoI RAATTY 2 cut(s) 544, 834
ArsI GACNNNNNNTTYG 2 cut(s) 781, 813
Asp700I GAANNNNTTC 1 cut(s) 1410
AspLEI GCGC 1 cut(s) 866
AspS9I GGNCC 2 cut(s) 640, 1028
AsuC2I CCSGG 1 cut(s) 1463
AsuHPI GGTGA 7 cut(s) 117, 407, 640, 695, 919, 1228, 1366
AsuNHI GCTAGC 1 cut(s) 293
AvaI CYCGRG 2 cut(s) 842, 1927
AvaII GGWCC 2 cut(s) 640, 1028
BaeGI GKGCMC 3 cut(s) 324, 480, 1707
BaeI ACNNNNGTAYC 4 cut(s) 722, 755, 1740, 1773
BamHI GGATCC 1 cut(s) 627
BanII GRGCYC 1 cut(s) 1041
BauI CACGAG 2 cut(s) 473, 1320
BbsI GAAGAC 1 cut(s) 1185
Bbv12I GWGCWC 1 cut(s) 480
BbvI GCAGC 6 cut(s) 563, 674, 882, 1505, 1525, 1751
BccI CCATC 7 cut(s) 1054, 1069, 1138, 1241, 1728, 1774, 1780
BceAI ACGGC 5 cut(s) 302, 419, 1084, 1223, 1506
BciT130I CCWGG 1 cut(s) 264
BciVI GTATCC 1 cut(s) 1741
BclI TGATCA 3 cut(s) 142, 1443, 1591
BcnI CCSGG 1 cut(s) 1463
BcoDI GTCTC 3 cut(s) 784, 1220, 1281
BfaI CTAG 6 cut(s) 294, 534, 831, 1073, 1152, 1281
BfoI RGCGCY 1 cut(s) 867
BfuI GTATCC 1 cut(s) 1741
BisI GCNGC 9 cut(s) 405, 577, 663, 896, 899, 916, 1494, 1539, 1740
BlpI GCTNAGC 1 cut(s) 1040
BlsI GCNGC 9 cut(s) 406, 578, 664, 897, 900, 917, 1495, 1540, 1741
Bme1390I CCNGG 2 cut(s) 264, 1463
Bme18I GGWCC 2 cut(s) 640, 1028
BmeT110I CYCGRG 2 cut(s) 842, 1927
BmgBI CACGTC 5 cut(s) 236, 612, 792, 1230, 1441
BmgT120I GGNCC 2 cut(s) 640, 1028
BmiI GGNNCC 1 cut(s) 629
BmrFI CCNGG 2 cut(s) 264, 1463
BmsI GCATC 2 cut(s) 1225, 1569
BmtI GCTAGC 1 cut(s) 297
BoxI GACNNNNGTC 2 cut(s) 776, 1309
BpiI GAAGAC 1 cut(s) 1185
Bpu10I CCTNAGC 1 cut(s) 1743
Bpu1102I GCTNAGC 1 cut(s) 1040
BpuMI CCSGG 1 cut(s) 1463
BsaAI YACGTR 1 cut(s) 1420
BsaBI GATNNNNATC 1 cut(s) 626
BsaHI GRCGYC 2 cut(s) 1185, 1715
BsaJI CCNNGG 3 cut(s) 263, 399, 809
BsaWI WCCGGW 4 cut(s) 87, 527, 782, 1510
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 108, 572, 637, 1067
Bse118I RCCGGY 2 cut(s) 305, 637
Bse1I ACTGG 3 cut(s) 41, 279, 503
Bse8I GATNNNNATC 1 cut(s) 626
BseAI TCCGGA 1 cut(s) 1510
BseBI CCWGG 1 cut(s) 264
BseDI CCNNGG 3 cut(s) 263, 399, 809
BseGI GGATG 5 cut(s) 155, 249, 1012, 1252, 1471
BseJI GATNNNNATC 1 cut(s) 626
BseLI CCNNNNNNNGG 5 cut(s) 87, 108, 572, 637, 1067
BseMII CTCAG 4 cut(s) 185, 749, 1054, 1511
BseNI ACTGG 3 cut(s) 41, 279, 503
BseRI GAGGAG 5 cut(s) 1401, 1600, 1630, 1670, 1840
BseSI GKGCMC 3 cut(s) 324, 480, 1707
BseXI GCAGC 6 cut(s) 563, 674, 882, 1505, 1525, 1751
BseYI CCCAGC 1 cut(s) 1162
BsgI GTGCAG 2 cut(s) 562, 1069
Bsh1236I CGCG 2 cut(s) 915, 1001
Bsh1285I CGRYCG 2 cut(s) 624, 1462
BshFI GGCC 5 cut(s) 309, 317, 404, 829, 1071
BsiEI CGRYCG 2 cut(s) 624, 1462
BsiHKAI GWGCWC 1 cut(s) 480
BsiHKCI CYCGRG 2 cut(s) 842, 1927
BsiSI CCGG 8 cut(s) 88, 306, 528, 638, 654, 783, 1462, 1511
BslFI GGGAC 4 cut(s) 1297, 1317, 1440, 1929
BslI CCNNNNNNNGG 5 cut(s) 87, 108, 572, 637, 1067
BsmAI GTCTC 3 cut(s) 784, 1220, 1281
BsmBI CGTCTC 2 cut(s) 1220, 1281
BsmFI GGGAC 4 cut(s) 1297, 1317, 1440, 1929
BsnI GGCC 5 cut(s) 309, 317, 404, 829, 1071
BsoBI CYCGRG 2 cut(s) 842, 1927
Bsp1286I GDGCHC 4 cut(s) 324, 480, 1041, 1707
Bsp13I TCCGGA 1 cut(s) 1510
Bsp1720I GCTNAGC 1 cut(s) 1040
BspANI GGCC 5 cut(s) 309, 317, 404, 829, 1071
BspCNI CTCAG 4 cut(s) 184, 748, 1053, 1510
BspEI TCCGGA 1 cut(s) 1510
BspFNI CGCG 2 cut(s) 915, 1001
BspLI GGNNCC 1 cut(s) 629
BspOI GCTAGC 1 cut(s) 297
BspPI GGATC 3 cut(s) 125, 622, 635
BsrBI CCGCTC 1 cut(s) 1526
BsrFI RCCGGY 2 cut(s) 305, 637
BsrI ACTGG 3 cut(s) 41, 279, 503
BssAI RCCGGY 2 cut(s) 305, 637
BssECI CCNNGG 3 cut(s) 263, 399, 809
BssNI GRCGYC 2 cut(s) 1185, 1715
BssSI CACGAG 2 cut(s) 473, 1320
BssT1I CCWWGG 1 cut(s) 399
Bst2BI CACGAG 2 cut(s) 473, 1320
Bst2UI CCWGG 1 cut(s) 264
Bst4CI ACNGT 6 cut(s) 244, 552, 713, 1337, 1431, 1561
Bst6I CTCTTC 3 cut(s) 1123, 1218, 1860
BstACI GRCGYC 2 cut(s) 1185, 1715
BstBAI YACGTR 1 cut(s) 1420
BstC8I GCNNGC 4 cut(s) 260, 295, 307, 1703
BstDEI CTNAG 6 cut(s) 171, 735, 1040, 1343, 1497, 1743
BstF5I GGATG 5 cut(s) 155, 249, 1012, 1252, 1471
BstFNI CGCG 2 cut(s) 915, 1001
BstH2I RGCGCY 1 cut(s) 867
BstHHI GCGC 1 cut(s) 866
BstMAI GTCTC 3 cut(s) 784, 1220, 1281
BstMCI CGRYCG 2 cut(s) 624, 1462
BstMWI GCNNNNNNNGC 3 cut(s) 410, 870, 1770
BstNI CCWGG 1 cut(s) 264
BstNSI RCATGY 1 cut(s) 484
BstPAI GACNNNNGTC 2 cut(s) 776, 1309
BstSCI CCNGG 2 cut(s) 262, 1461
BstSLI GKGCMC 3 cut(s) 324, 480, 1707
BstUI CGCG 2 cut(s) 915, 1001
BstV1I GCAGC 6 cut(s) 563, 674, 882, 1505, 1525, 1751
BstV2I GAAGAC 1 cut(s) 1185
BstX2I RGATCY 1 cut(s) 627
BstYI RGATCY 1 cut(s) 627
BsuI GTATCC 1 cut(s) 1741
BsuRI GGCC 5 cut(s) 309, 317, 404, 829, 1071
BtgZI GCGATG 1 cut(s) 1248
BtrI CACGTC 5 cut(s) 236, 612, 792, 1230, 1441
BtsCI GGATG 5 cut(s) 155, 249, 1012, 1252, 1471
BtsIMutI CAGTG 4 cut(s) 240, 496, 507, 718
Cac8I GCNNGC 4 cut(s) 260, 295, 307, 1703
CfoI GCGC 1 cut(s) 866
Cfr10I RCCGGY 2 cut(s) 305, 637
Cfr13I GGNCC 2 cut(s) 640, 1028
CseI GACGC 1 cut(s) 1007
Csp6I GTAC 5 cut(s) 91, 188, 607, 739, 1370
CviAII CATG 5 cut(s) 481, 743, 958, 1104, 1201
CviQI GTAC 5 cut(s) 91, 188, 607, 739, 1370
DdeI CTNAG 6 cut(s) 171, 735, 1040, 1343, 1497, 1743
EaeI YGGCCR 1 cut(s) 315
Eam1104I CTCTTC 3 cut(s) 1123, 1218, 1860
EarI CTCTTC 3 cut(s) 1123, 1218, 1860
Eco130I CCWWGG 1 cut(s) 399
Eco147I AGGCCT 1 cut(s) 829
Eco24I GRGCYC 1 cut(s) 1041
Eco32I GATATC 2 cut(s) 504, 517
Eco47I GGWCC 2 cut(s) 640, 1028
Eco57I CTGAAG 1 cut(s) 844
Eco88I CYCGRG 2 cut(s) 842, 1927
EcoRII CCWGG 1 cut(s) 262
EcoRV GATATC 2 cut(s) 504, 517
EcoT14I CCWWGG 1 cut(s) 399
EcoT38I GRGCYC 1 cut(s) 1041
ErhI CCWWGG 1 cut(s) 399
Esp3I CGTCTC 2 cut(s) 1220, 1281
FaeI CATG 5 cut(s) 484, 746, 961, 1107, 1204
FaqI GGGAC 4 cut(s) 1297, 1317, 1440, 1929
FatI CATG 5 cut(s) 480, 742, 957, 1103, 1200
FauI CCCGC 3 cut(s) 88, 911, 1519
FbaI TGATCA 3 cut(s) 142, 1443, 1591
FblI GTMKAC 1 cut(s) 1339
Fnu4HI GCNGC 9 cut(s) 405, 577, 663, 896, 899, 916, 1494, 1539, 1740
FokI GGATG 5 cut(s) 142, 236, 1019, 1259, 1458
FriOI GRGCYC 1 cut(s) 1041
Fsp4HI GCNGC 9 cut(s) 405, 577, 663, 896, 899, 916, 1494, 1539, 1740
FspBI CTAG 6 cut(s) 294, 534, 831, 1073, 1152, 1281
GlaI GCGC 1 cut(s) 865
GluI GCNGC 9 cut(s) 405, 577, 663, 896, 899, 916, 1494, 1539, 1740
GsaI CCCAGC 1 cut(s) 1166
HaeII RGCGCY 1 cut(s) 867
HaeIII GGCC 5 cut(s) 309, 317, 404, 829, 1071
HapII CCGG 8 cut(s) 88, 306, 528, 638, 654, 783, 1462, 1511
HgaI GACGC 1 cut(s) 1007
HhaI GCGC 1 cut(s) 866
Hin1I GRCGYC 2 cut(s) 1185, 1715
Hin1II CATG 5 cut(s) 484, 746, 961, 1107, 1204
Hin6I GCGC 1 cut(s) 864
HinP1I GCGC 1 cut(s) 864
HincII GTYRAC 1 cut(s) 771
HindII GTYRAC 1 cut(s) 771
HinfI GANTC 7 cut(s) 122, 182, 378, 490, 601, 970, 1389
HpaII CCGG 8 cut(s) 88, 306, 528, 638, 654, 783, 1462, 1511
HphI GGTGA 7 cut(s) 117, 407, 640, 695, 919, 1228, 1366
Hpy166II GTNNAC 7 cut(s) 478, 609, 771, 891, 1219, 1340, 1438
Hpy188I TCNGA 6 cut(s) 377, 431, 1500, 1523, 1596, 1901
Hpy188III TCNNGA 8 cut(s) 625, 823, 1173, 1322, 1511, 1552, 1907, 1927
Hpy8I GTNNAC 7 cut(s) 478, 609, 771, 891, 1219, 1340, 1438
Hpy99I CGWCG 6 cut(s) 793, 889, 1187, 1190, 1717, 1720
HpyAV CCTTC 8 cut(s) 33, 37, 86, 94, 112, 570, 710, 1250
HpyCH4III ACNGT 6 cut(s) 244, 552, 713, 1337, 1431, 1561
HpyCH4V TGCA 7 cut(s) 478, 579, 873, 1086, 1103, 1157, 1582
HpyF10VI GCNNNNNNNGC 3 cut(s) 410, 870, 1770
HpyF3I CTNAG 6 cut(s) 171, 735, 1040, 1343, 1497, 1743
Hsp92I GRCGYC 2 cut(s) 1185, 1715
Hsp92II CATG 5 cut(s) 484, 746, 961, 1107, 1204
HspAI GCGC 1 cut(s) 864
Kpn2I TCCGGA 1 cut(s) 1510
KroI GCCGGC 1 cut(s) 305
KroNI GCCGGC 1 cut(s) 307
Ksp22I TGATCA 3 cut(s) 142, 1443, 1591
LmnI GCTCC 2 cut(s) 530, 954
Lsp1109I GCAGC 6 cut(s) 563, 674, 882, 1505, 1525, 1751
LweI GCATC 2 cut(s) 1225, 1569
MaeI CTAG 6 cut(s) 294, 534, 831, 1073, 1152, 1281
MaeIII GTNAC 5 cut(s) 236, 440, 646, 1354, 1420
MbiI CCGCTC 1 cut(s) 1526
MboII GAAGA 8 cut(s) 128, 280, 1110, 1190, 1235, 1415, 1558, 1877
MflI RGATCY 1 cut(s) 627
MhlI GDGCHC 4 cut(s) 324, 480, 1041, 1707
MluCI AATT 3 cut(s) 544, 834, 987
MlyI GAGTC 4 cut(s) 116, 191, 387, 1398
MmeI TCCRAC 3 cut(s) 465, 1651, 1738
MroI TCCGGA 1 cut(s) 1510
MroNI GCCGGC 1 cut(s) 305
MroXI GAANNNNTTC 1 cut(s) 1410
MseI TTAA 2 cut(s) 924, 1689
MslI CAYNNNNRTG 1 cut(s) 1562
MspA1I CMGCKG 1 cut(s) 901
MspI CCGG 8 cut(s) 88, 306, 528, 638, 654, 783, 1462, 1511
MspR9I CCNGG 2 cut(s) 264, 1463
MvaI CCWGG 1 cut(s) 264
MvnI CGCG 2 cut(s) 915, 1001
MwoI GCNNNNNNNGC 3 cut(s) 410, 870, 1770
NaeI GCCGGC 1 cut(s) 307
NciI CCSGG 1 cut(s) 1463
NgoMIV GCCGGC 1 cut(s) 305
NheI GCTAGC 1 cut(s) 293
NlaIII CATG 5 cut(s) 484, 746, 961, 1107, 1204
NlaIV GGNNCC 1 cut(s) 629
NmeAIII GCCGAG 2 cut(s) 638, 834
NmuCI GTSAC 4 cut(s) 236, 646, 1354, 1420
NspI RCATGY 1 cut(s) 484
OliI CACNNNNGTG 1 cut(s) 1562
PaeR7I CTCGAG 2 cut(s) 842, 1927
PceI AGGCCT 1 cut(s) 829
PciI ACATGT 1 cut(s) 480
PcsI WCGNNNNNNNCGW 3 cut(s) 15, 617, 1218
PdiI GCCGGC 1 cut(s) 307
PdmI GAANNNNTTC 1 cut(s) 1410
PfeI GAWTC 3 cut(s) 490, 601, 970
PflFI GACNNNGTC 2 cut(s) 242, 1184
PkrI GCNGC 9 cut(s) 406, 578, 664, 897, 900, 917, 1495, 1540, 1741
Ple19I CGATCG 1 cut(s) 624
PleI GAGTC 4 cut(s) 116, 190, 386, 1397
PpsI GAGTC 4 cut(s) 116, 190, 386, 1397
Ppu21I YACGTR 1 cut(s) 1420
PscI ACATGT 1 cut(s) 480
PshAI GACNNNNGTC 2 cut(s) 776, 1309
PsiI TTATAA 3 cut(s) 851, 977, 993
Psp1406I AACGTT 2 cut(s) 672, 1125
Psp6I CCWGG 1 cut(s) 262
PspFI CCCAGC 1 cut(s) 1162
PspGI CCWGG 1 cut(s) 262
PspN4I GGNNCC 1 cut(s) 629
PspPI GGNCC 2 cut(s) 640, 1028
PspXI VCTCGAGB 1 cut(s) 842
PsuI RGATCY 1 cut(s) 627
PsyI GACNNNGTC 2 cut(s) 242, 1184
PvuI CGATCG 1 cut(s) 624
RsaI GTAC 5 cut(s) 92, 189, 608, 740, 1371
RsaNI GTAC 5 cut(s) 91, 188, 607, 739, 1370
RseI CAYNNNNRTG 1 cut(s) 1562
SaqAI TTAA 2 cut(s) 924, 1689
SatI GCNGC 9 cut(s) 405, 577, 663, 896, 899, 916, 1494, 1539, 1740
Sau96I GGNCC 2 cut(s) 640, 1028
SchI GAGTC 4 cut(s) 116, 191, 387, 1398
ScrFI CCNGG 2 cut(s) 264, 1463
SduI GDGCHC 4 cut(s) 324, 480, 1041, 1707
SfaNI GCATC 2 cut(s) 1225, 1569
Sfr274I CTCGAG 2 cut(s) 842, 1927
SinI GGWCC 2 cut(s) 640, 1028
SlaI CTCGAG 2 cut(s) 842, 1927
SmiMI CAYNNNNRTG 1 cut(s) 1562
SmlI CTYRAG 2 cut(s) 842, 1927
SmoI CTYRAG 2 cut(s) 842, 1927
Sse9I AATT 3 cut(s) 544, 834, 987
SseBI AGGCCT 1 cut(s) 829
SspMI CTAG 6 cut(s) 294, 534, 831, 1073, 1152, 1281
StuI AGGCCT 1 cut(s) 829
StyD4I CCNGG 2 cut(s) 262, 1461
StyI CCWWGG 1 cut(s) 399
TaaI ACNGT 6 cut(s) 244, 552, 713, 1337, 1431, 1561
TaqI TCGA 5 cut(s) 48, 114, 843, 1551, 1928
TasI AATT 3 cut(s) 544, 834, 987
TatI WGTACW 2 cut(s) 187, 606
TauI GCSGC 3 cut(s) 407, 901, 918
TfiI GAWTC 3 cut(s) 490, 601, 970
Tru1I TTAA 2 cut(s) 924, 1689
Tru9I TTAA 2 cut(s) 924, 1689
TscAI CASTG 4 cut(s) 247, 503, 514, 718
TseFI GTSAC 4 cut(s) 236, 646, 1354, 1420
TseI GCWGC 6 cut(s) 576, 662, 895, 1493, 1538, 1739
Tsp45I GTSAC 4 cut(s) 236, 646, 1354, 1420
TspDTI ATGAA 5 cut(s) 17, 94, 436, 974, 1790
TspGWI ACGGA 3 cut(s) 428, 873, 1387
TspRI CASTG 4 cut(s) 247, 503, 514, 718
Tth111I GACNNNGTC 2 cut(s) 242, 1184
VneI GTGCAC 1 cut(s) 476
VpaK11BI GGWCC 2 cut(s) 640, 1028
XapI RAATTY 2 cut(s) 544, 834
XceI RCATGY 1 cut(s) 484
XcmI CCANNNNNNNNNTGG 1 cut(s) 105
XhoI CTCGAG 2 cut(s) 842, 1927
XmiI GTMKAC 1 cut(s) 1339
XmnI GAANNNNTTC 1 cut(s) 1410
XspI CTAG 6 cut(s) 294, 534, 831, 1073, 1152, 1281
ZraI GACGTC 2 cut(s) 1186, 1716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.