pycom06g20800

Purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0007589
Physical Location & Seq
Reverse (-)
23708892 .. 23711547
2656 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1128 bp
ATGAATATAATACACTCAACGTTATACTTTCTTCTAGTTCCAACTTCCAACCATCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACAGGGAAACATAATATTGGCTACCTGATGTCCACGGCCATGGGGTTGCTGTGGGTGGTTGTTTGCATGAATATTGTTCTGTTGAGCTTTGTTTCTGTGTCGACGGCCGAGCTTCAGCGATTTGAGCACCCTGTGAAACCTGATGGCTCACTCAGCTTTTTGGCGGTTGGTGACTGGGGTAGAAGGGGTGGTTACAATCAATCTCAAGTTGCTTTTCAGATGGGGAAGATTGGAGCCAAATTAAACATCGACTTCGTCATCTCCACGGGTGACAACTTTTACAACAGGGGATTGACCAGCGTCAACGACCCTGCATTTCTAACGTCGTTTACTGAAATCTATACTGCTCAGAGCCTGCAAAAGCAATGGTATCTTGTTCTCGGCAACCATGACTACCGGGGAAACGCTTTGGCCCAGTTGAGTCCGGTCCTTAGGAAGATGGACAGCCGGTGGCTTTGCCTCAGGTCCTTTCTTGTCAACACACAAGTTGCAGACTTCTTCTTCATTGACACCAACCCTTTTGTGGACAAGTACTTTTTGAGGCAAAAGTACTACAAGCATGACTGGAGAGGTGTTCTTCCTAGGAAGGAGTACATCTCCAACCTCTTGAAGGATCTAGATTTTGCATTAAGGAATTCTTCTGCAAAGTGGAAAGTTGTCGTTGGACATCACACAATCAGAAGCATAGGGCATCATGGAGAGACCAAAGAAGTAGTAGACCAAATTCTGCCCATTCTTGAGGCAAACAACGTTGATGTGTACATAAACGGACATGACCACTGCTTGGAACACTTATGTGACACCAACAGCCAAATGCAATTCTTGACCAGCGGTGGTGGGTCGAAGGCATGGAAAGGAGATATCAAAGCGAAACGAAACGGATTCAAGTTCTACTATGACGGGCAAGGCTTCTTGTCTGCACAACTTACAGAAACTGATGCAGAATTTGCATTCTATGATATGTTCGGTACAGTTCTGCATCGTCTGAATCTATCCAAGCCTAGCAAATTTCTTTACAATTCCATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00740 ko01100 ko04142 ko04380 ko05323 map00740 map01100 map04142 map04380 map05323
Pfam Domains
Protein Families
Metallophos

Protein Analysis

376

Amino Acids

42.69

Weight (kDa)

8.84

Isoelectric Point (pI)

34.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 85 - 294 3.2e-20 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 883
AccI GTMKAC 2 cut(s) 200, 816
AciI CCGC 2 cut(s) 263, 930
AclI AACGTT 2 cut(s) 20, 849
AclWI GGATC 1 cut(s) 720
AcoI YGGCCR 2 cut(s) 135, 204
AcsI RAATTY 4 cut(s) 733, 822, 1043, 1106
AcuI CTGAAG 1 cut(s) 197
AdeI CACNNNGTG 1 cut(s) 232
AfaI GTAC 5 cut(s) 632, 650, 692, 860, 1069
AfiI CCNNNNNNNGG 3 cut(s) 622, 709, 883
AgsI TTSAA 2 cut(s) 709, 985
AleI CACNNNNGTG 1 cut(s) 894
AluBI AGCT 3 cut(s) 186, 211, 255
AluI AGCT 3 cut(s) 186, 211, 255
Alw21I GWGCWC 1 cut(s) 228
Alw26I GTCTC 1 cut(s) 794
AlwI GGATC 1 cut(s) 720
AlwNI CAGNNNCTG 2 cut(s) 454, 1034
AoxI GGCC 3 cut(s) 135, 204, 510
ApoI RAATTY 4 cut(s) 733, 822, 1043, 1106
AspA2I CCTAGG 1 cut(s) 680
AspS9I GGNCC 3 cut(s) 511, 526, 564
AsuC2I CCSGG 1 cut(s) 497
AsuHPI GGTGA 2 cut(s) 281, 380
AvaII GGWCC 2 cut(s) 526, 564
AvrII CCTAGG 1 cut(s) 680
AxyI CCTNAGG 2 cut(s) 530, 560
Bbv12I GWGCWC 1 cut(s) 228
BccI CCATC 4 cut(s) 60, 236, 313, 532
BceAI ACGGC 2 cut(s) 150, 219
BcnI CCSGG 1 cut(s) 497
BcoDI GTCTC 1 cut(s) 794
BfaI CTAG 4 cut(s) 35, 681, 716, 1101
BlnI CCTAGG 1 cut(s) 680
BmcAI AGTACT 2 cut(s) 632, 650
Bme1390I CCNGG 1 cut(s) 497
Bme18I GGWCC 2 cut(s) 526, 564
BmgT120I GGNCC 3 cut(s) 511, 526, 564
BmiI GGNNCC 1 cut(s) 334
BmrFI CCNGG 1 cut(s) 497
BmrI ACTGGG 2 cut(s) 283, 508
BmsI GCATC 3 cut(s) 799, 1027, 1087
BmuI ACTGGG 2 cut(s) 283, 508
BoxI GACNNNNGTC 1 cut(s) 398
BplI GAGNNNNNCTC 2 cut(s) 680, 712
BpmI CTGGAG 1 cut(s) 685
BpuEI CTTGAG 2 cut(s) 288, 857
BpuMI CCSGG 1 cut(s) 497
BsaI GGTCTC 1 cut(s) 794
BsaJI CCNNGG 5 cut(s) 132, 138, 363, 496, 680
BsaWI WCCGGW 1 cut(s) 523
Bsc4I CCNNNNNNNGG 3 cut(s) 622, 709, 883
Bse118I RCCGGY 1 cut(s) 546
Bse1I ACTGG 3 cut(s) 278, 514, 668
Bse21I CCTNAGG 2 cut(s) 530, 560
Bse3DI GCAATG 1 cut(s) 470
BseDI CCNNGG 5 cut(s) 132, 138, 363, 496, 680
BseLI CCNNNNNNNGG 3 cut(s) 622, 709, 883
BseMI GCAATG 1 cut(s) 470
BseMII CTCAG 3 cut(s) 265, 461, 574
BseNI ACTGG 3 cut(s) 278, 514, 668
BseX3I CGGCCG 1 cut(s) 204
BsgI GTGCAG 1 cut(s) 1002
Bsh1285I CGRYCG 1 cut(s) 207
BshFI GGCC 3 cut(s) 137, 206, 512
BsiEI CGRYCG 1 cut(s) 207
BsiHKAI GWGCWC 1 cut(s) 228
BsiSI CCGG 3 cut(s) 496, 524, 547
BslI CCNNNNNNNGG 3 cut(s) 622, 709, 883
BsmAI GTCTC 1 cut(s) 794
BsmI GAATGC 1 cut(s) 1049
BsnI GGCC 3 cut(s) 137, 206, 512
Bso31I GGTCTC 1 cut(s) 794
Bsp1286I GDGCHC 1 cut(s) 228
Bsp1407I TGTACA 1 cut(s) 858
Bsp143I GATC 1 cut(s) 712
Bsp19I CCATGG 1 cut(s) 138
BspACI CCGC 2 cut(s) 263, 930
BspANI GGCC 3 cut(s) 137, 206, 512
BspCNI CTCAG 3 cut(s) 264, 460, 573
BspLI GGNNCC 1 cut(s) 334
BspPI GGATC 1 cut(s) 720
BspTNI GGTCTC 1 cut(s) 794
BsrDI GCAATG 1 cut(s) 470
BsrFI RCCGGY 1 cut(s) 546
BsrGI TGTACA 1 cut(s) 858
BsrI ACTGG 3 cut(s) 278, 514, 668
BssAI RCCGGY 1 cut(s) 546
BssECI CCNNGG 5 cut(s) 132, 138, 363, 496, 680
BssMI GATC 1 cut(s) 712
BssT1I CCWWGG 2 cut(s) 138, 680
Bst4CI ACNGT 1 cut(s) 1072
BstAPI GCANNNNNTGC 1 cut(s) 1046
BstAUI TGTACA 1 cut(s) 858
BstC8I GCNNGC 1 cut(s) 455
BstDEI CTNAG 4 cut(s) 251, 447, 530, 560
BstDSI CCRYGG 3 cut(s) 132, 138, 363
BstENI CCTNNNNNAGG 1 cut(s) 707
BstKTI GATC 1 cut(s) 715
BstMAI GTCTC 1 cut(s) 794
BstMBI GATC 1 cut(s) 712
BstMCI CGRYCG 1 cut(s) 207
BstMWI GCNNNNNNNGC 3 cut(s) 223, 252, 1046
BstPAI GACNNNNGTC 1 cut(s) 398
BstSCI CCNGG 1 cut(s) 495
BstX2I RGATCY 1 cut(s) 712
BstXI CCANNNNNNTGG 1 cut(s) 139
BstYI RGATCY 1 cut(s) 712
BstZI CGGCCG 1 cut(s) 204
Bsu36I CCTNAGG 2 cut(s) 530, 560
BsuRI GGCC 3 cut(s) 137, 206, 512
BtgI CCRYGG 3 cut(s) 132, 138, 363
BtsI GCAGTG 1 cut(s) 877
BtsIMutI CAGTG 1 cut(s) 877
Cac8I GCNNGC 1 cut(s) 455
CaiI CAGNNNCTG 2 cut(s) 454, 1034
Cfr10I RCCGGY 1 cut(s) 546
Cfr13I GGNCC 3 cut(s) 511, 526, 564
CseI GACGC 1 cut(s) 388
Csp6I GTAC 5 cut(s) 631, 649, 691, 859, 1068
CviAII CATG 8 cut(s) 139, 166, 488, 659, 794, 872, 948, 1123
CviQI GTAC 5 cut(s) 631, 649, 691, 859, 1068
DdeI CTNAG 4 cut(s) 251, 447, 530, 560
DpnI GATC 1 cut(s) 714
DpnII GATC 1 cut(s) 712
DraIII CACNNNGTG 1 cut(s) 232
EaeI YGGCCR 2 cut(s) 135, 204
EagI CGGCCG 1 cut(s) 204
EclXI CGGCCG 1 cut(s) 204
Eco130I CCWWGG 2 cut(s) 138, 680
Eco31I GGTCTC 1 cut(s) 794
Eco32I GATATC 1 cut(s) 961
Eco47I GGWCC 2 cut(s) 526, 564
Eco52I CGGCCG 1 cut(s) 204
Eco57I CTGAAG 1 cut(s) 197
Eco81I CCTNAGG 2 cut(s) 530, 560
EcoNI CCTNNNNNAGG 1 cut(s) 707
EcoO109I RGGNCCY 1 cut(s) 564
EcoRI GAATTC 1 cut(s) 733
EcoRV GATATC 1 cut(s) 961
EcoT14I CCWWGG 2 cut(s) 138, 680
ErhI CCWWGG 2 cut(s) 138, 680
FaeI CATG 8 cut(s) 142, 169, 491, 662, 797, 875, 951, 1126
FalI AAGNNNNNCTT 2 cut(s) 721, 753
FatI CATG 8 cut(s) 138, 165, 487, 658, 793, 871, 947, 1122
FblI GTMKAC 2 cut(s) 200, 816
FspBI CTAG 4 cut(s) 35, 681, 716, 1101
GsuI CTGGAG 1 cut(s) 685
HaeIII GGCC 3 cut(s) 137, 206, 512
HapII CCGG 3 cut(s) 496, 524, 547
HgaI GACGC 1 cut(s) 388
Hin1II CATG 8 cut(s) 142, 169, 491, 662, 797, 875, 951, 1126
HincII GTYRAC 3 cut(s) 201, 403, 577
HindII GTYRAC 3 cut(s) 201, 403, 577
HinfI GANTC 3 cut(s) 520, 981, 1087
HpaII CCGG 3 cut(s) 496, 524, 547
HphI GGTGA 2 cut(s) 281, 380
Hpy166II GTNNAC 8 cut(s) 132, 201, 403, 429, 577, 625, 817, 859
Hpy188I TCNGA 4 cut(s) 318, 450, 779, 1086
Hpy188III TCNNGA 4 cut(s) 706, 716, 836, 922
Hpy8I GTNNAC 8 cut(s) 132, 201, 403, 429, 577, 625, 817, 859
Hpy99I CGWCG 2 cut(s) 205, 427
HpyAV CCTTC 4 cut(s) 276, 679, 703, 937
HpyCH4III ACNGT 1 cut(s) 1072
HpyCH4IV ACGT 3 cut(s) 20, 422, 849
HpyF10VI GCNNNNNNNGC 3 cut(s) 223, 252, 1046
HpyF3I CTNAG 4 cut(s) 251, 447, 530, 560
HpySE526I ACGT 3 cut(s) 20, 422, 849
Hsp92II CATG 8 cut(s) 142, 169, 491, 662, 797, 875, 951, 1126
Kzo9I GATC 1 cut(s) 712
LmnI GCTCC 1 cut(s) 332
LweI GCATC 3 cut(s) 799, 1027, 1087
MaeI CTAG 4 cut(s) 35, 681, 716, 1101
MaeII ACGT 3 cut(s) 20, 422, 849
MaeIII GTNAC 4 cut(s) 269, 290, 368, 896
MalI GATC 1 cut(s) 714
MboI GATC 1 cut(s) 712
MboII GAAGA 7 cut(s) 23, 337, 547, 589, 592, 668, 729
MflI RGATCY 1 cut(s) 712
MhlI GDGCHC 1 cut(s) 228
MluCI AATT 7 cut(s) 338, 733, 822, 917, 1043, 1106, 1117
MlyI GAGTC 1 cut(s) 529
MmeI TCCRAC 4 cut(s) 65, 72, 723, 742
MnlI CCTC 5 cut(s) 569, 633, 662, 713, 832
MseI TTAA 2 cut(s) 341, 728
MslI CAYNNNNRTG 2 cut(s) 137, 894
MspA1I CMGCKG 1 cut(s) 930
MspI CCGG 3 cut(s) 496, 524, 547
MspR9I CCNGG 1 cut(s) 497
Mva1269I GAATGC 1 cut(s) 1049
MwoI GCNNNNNNNGC 3 cut(s) 223, 252, 1046
NciI CCSGG 1 cut(s) 497
NcoI CCATGG 1 cut(s) 138
NdeII GATC 1 cut(s) 712
NlaIII CATG 8 cut(s) 142, 169, 491, 662, 797, 875, 951, 1126
NlaIV GGNNCC 1 cut(s) 334
NmeAIII GCCGAG 2 cut(s) 232, 459
NmuCI GTSAC 3 cut(s) 269, 368, 896
OliI CACNNNNGTG 1 cut(s) 894
PctI GAATGC 1 cut(s) 1049
PfeI GAWTC 2 cut(s) 981, 1087
PflFI GACNNNGTC 1 cut(s) 353
PflMI CCANNNNNTGG 1 cut(s) 883
PleI GAGTC 1 cut(s) 528
PpsI GAGTC 1 cut(s) 528
PpuMI RGGWCCY 1 cut(s) 564
PshAI GACNNNNGTC 1 cut(s) 398
Psp1406I AACGTT 2 cut(s) 20, 849
Psp5II RGGWCCY 1 cut(s) 564
PspN4I GGNNCC 1 cut(s) 334
PspPI GGNCC 3 cut(s) 511, 526, 564
PspPPI RGGWCCY 1 cut(s) 564
PstNI CAGNNNCTG 2 cut(s) 454, 1034
PsuI RGATCY 1 cut(s) 712
PsyI GACNNNGTC 1 cut(s) 353
RsaI GTAC 5 cut(s) 632, 650, 692, 860, 1069
RsaNI GTAC 5 cut(s) 631, 649, 691, 859, 1068
RseI CAYNNNNRTG 2 cut(s) 137, 894
SalI GTCGAC 1 cut(s) 199
SaqAI TTAA 2 cut(s) 341, 728
Sau3AI GATC 1 cut(s) 712
Sau96I GGNCC 3 cut(s) 511, 526, 564
ScaI AGTACT 2 cut(s) 632, 650
SchI GAGTC 1 cut(s) 529
ScrFI CCNGG 1 cut(s) 497
SduI GDGCHC 1 cut(s) 228
SfaNI GCATC 3 cut(s) 799, 1027, 1087
SinI GGWCC 2 cut(s) 526, 564
SmiMI CAYNNNNRTG 2 cut(s) 137, 894
SmlI CTYRAG 2 cut(s) 303, 836
SmoI CTYRAG 2 cut(s) 303, 836
Sse9I AATT 7 cut(s) 338, 733, 822, 917, 1043, 1106, 1117
SsiI CCGC 2 cut(s) 263, 930
SspI AATATT 2 cut(s) 115, 172
SspMI CTAG 4 cut(s) 35, 681, 716, 1101
StyD4I CCNGG 1 cut(s) 495
StyI CCWWGG 2 cut(s) 138, 680
TaaI ACNGT 1 cut(s) 1072
TaiI ACGT 3 cut(s) 23, 425, 852
TaqI TCGA 3 cut(s) 200, 348, 941
TasI AATT 7 cut(s) 338, 733, 822, 917, 1043, 1106, 1117
TatI WGTACW 4 cut(s) 630, 648, 690, 858
TfiI GAWTC 2 cut(s) 981, 1087
Tru1I TTAA 2 cut(s) 341, 728
Tru9I TTAA 2 cut(s) 341, 728
TscAI CASTG 1 cut(s) 884
TseFI GTSAC 3 cut(s) 269, 368, 896
Tsp45I GTSAC 3 cut(s) 269, 368, 896
TspDTI ATGAA 3 cut(s) 17, 182, 592
TspGWI ACGGA 2 cut(s) 882, 993
TspRI CASTG 1 cut(s) 884
Tth111I GACNNNGTC 1 cut(s) 353
Van91I CCANNNNNTGG 1 cut(s) 883
VpaK11BI GGWCC 2 cut(s) 526, 564
XagI CCTNNNNNAGG 1 cut(s) 707
XapI RAATTY 4 cut(s) 733, 822, 1043, 1106
XbaI TCTAGA 1 cut(s) 715
XcmI CCANNNNNNNNNTGG 1 cut(s) 619
XmaJI CCTAGG 1 cut(s) 680
XmiI GTMKAC 2 cut(s) 200, 816
XspI CTAG 4 cut(s) 35, 681, 716, 1101
ZrmI AGTACT 2 cut(s) 632, 650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.