Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0013401

Physical Location & Seq

Genomic Coordinates Forward (+)

4848801 .. 4859743

Gene Structure 10943 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGGAGGCCACCGGCAGCTGGGACGCCCTCGACTGGACCATTGAGCCGGTTTCGCGGTCCGTTTCTCGGCCCGTTTCGCATGTGAAATTGGAGTGCTTGCTTGAAGCCGAGCAAGTCCAAGTTGAGGGGTCTGGAGTTGTTCTTGTTAATACGGATAAGGCAGGCACTTTGATAGTGACCAATTTTCGTCTTCTATTCCTGAGTGAGGGAACTAGGAATGTTATTGCACTTGGCACGATACCGTTGGCAACAATTGAGAAGTTCACCGAAATTGTTGTAAAGAATCAGCCAACCCCTCGTCAATCCGAAAAGACTCCATCAAGACAGCTTCTTCAGGTCATTGGTAAAGACATGAGGACGATTGTCTTTGGGTTTCGTCCTGAAACAAGGGAGAGACATGCAATATTTGATGCATTATCAAGGTGTACAAAGCCAACAAGTCTGTGGGATCTTTATGCTTTTGTTTCTGGACCTTCCAAATTTGGTAACACCAACCCAAAGGTGCGGTTACTGAATGAGTATCTTCGGCTTCTTGGGAAAGGGTCCTCACGTGCATCTATGAATATGATTGAAGATGGGTCATTCACATTTTCTAATGATTTGTGGAGGATAAGTAGTATAAATTCCAGCTATATCATGTGCCAGAGTTATCCATTTGCCTTGATGGTTCCAAAATCCATAACTGATGAAGAAGTGCTTCAAGCTTCCAACTTCCGAGCAAGAGGTCGCTTGCCTGTAGTTACATGGTGTCATCCTGAAACGGGAGCAGTTCTTGCACGGTCATCCCAACCCTTAGTTGGTCTCATGATGAATATGAGGAGTAACACAGATGAAAAGATTGTTGCTGCACTTTGCACTCAACTTGCTGGTACAACAGTTAAACAGAGGAAGTTATATATAGCCGATGCAAGGCCTCGAAAAAATGCTCTAGCTAATGGTGCTATGGGAGGTGGCTCTGAGTCATCTTCACATTATTCTCAATCTGAGATAGTTTTCTTTGGGATAGACAACATACATGCAATGAGAGAGAGCTTTGCCAGACTCAGAGACTATTTAGACACTCATGGTGCTTCATCGGATGGAAGGTCATCTTTCTTGAGACATGGTGGATGGACGTGGGGTGGAGGTAACCTAAGCAGTATGTCTGCTTCAGTGTCAACACTGGGGGACAGTGGTTGGTTAATACATGTTCAAAGTGTCTTGGCTGGTTCTGCTTGGATTGCTGCTCGTGTTGCTTTGGAGTCGGCATCAGTGCTTGTACATTGTAGTGATGGATGGGACAGAACCACTCAGCTGATTTCACTTGCCAATTTGTTGCTTGATCCATACTATCGGACTTTAACTGGGTTTCAGGCACTGATTGAGAAAGATTGGTTAGCATTTGGTCACCCCTTTGCAGATCGAGTTGGCATGCCAGCTGTAACGGGAAGTGGCAACACGCCTTCTGAACTGACAAGGCAGGCCTCTGCTCCAGTTCTCCAGTCATCACCCAGTCGCCATTCATCAGTGTCTCAAGCGCCCACTTCTCATGCACAGAATTCAAATGACTATTCTCCCATATTTCTGCAGTGGGTTGATTGTGTTTCACAATTGTTACGGATGTATCCTTTTGCTTTTGAGTTTTCTTCGGCATTTCTGGTGGATCTATTGGACTCTGTTCTATCGTGTCGCTTTGGAAACTTCTTATGTAATAGTGAAAGGGAGAGGCAGCAATGTGGTGTACCCGATGCTTGTGGATGCATGTGGGCATATTTTGCTGATTTACGTGCTTCGCAGGGAAGTTCTCATGTGCACTATAACTACTTTTATGATCCCTTGAAACACGGTGGTCCACTTTTACCTCCAGCAGCAGCTTTAGCACCAACTCTTTGGCCCCAATTCCATCTTCGTTGGGCTTGTCCCTTAGAGGCTCAAGTTGGAGGGGTTGAAGCTCAATTTAGGCAAATGGATGTCAAGTTCTCTGAACTACAAAAGGAAAAAGAAATGGCAGAAAGGAAAGCTAAAGAAATCGCCACCTTAATGGAATCATTAACTGCAGAATTGCAAAATGAGAAGCAAGTTAGCAGCTCAGCCAGGCAGATGGCCAAGAGGGCAAGCAGGGAAAGTGACGCCATAAAGCGAGCCGTACAGTCACTGGGATGCAAGGTCCACTTTTCAAACAGTGGAGATTGCGCCGTTGACATCGAAAGCAGCCAATTTGCATCTTCGCAGAAATTACCTTATTATTTAAAAAGAGAAGCGGATGGCACCATGCAGCGGGATGAGAAATCAGACCTCTCCTTTTCAATCACAGTTATGGCAGATGACGATGCTTCCATCAACCCAATTGGCCGAGTATGTGAAACGTTATGCCCGTTAGGCATGCGAGATGGGGGCTGCCGGTGGCCACATGCTGGTTGTGCTCAGTTGGGTAGCCAGTTTCTCGGACTAAAGGCTAACTACGAGGCATTTGATAAACTTTCTATTTATGATAGCTATTTCCAGCCAAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004438 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0023052 GO:0030258 GO:0031410 GO:0031668 GO:0031982 GO:0033554 GO:0034593 GO:0035556 GO:0042221 GO:0042578 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052629 GO:0052744 GO:0052866 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0080134 GO:0097708 GO:0104004 GO:0106018 GO:1901700 GO:1901701 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Myotub-related

Protein Analysis

831

Amino Acids

91.6

Weight (kDa)

7.0

Isoelectric Point (pI)

49.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myotub-related	PF06602	196 - 570	4.8e-126	Myotubularin-like phosphatase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10550 AT5G04540
fragaria_vesca	FvH4_7g06400
malus_domestica	MD02G1244600.v1.1 MD07G1072600.v1.1
prunus_persica	Prupe.2G090700_v2.0.a1 Prupe.2G090700_v2.0.a1
pyrus_communis	pycom02g21050 pycom07g05570
rosa_chinensis	RchiOBHm_Chr1g0334491
rosa_laevigata	RLG00000029449
rosa_roxburghii	Rroxscaffold_4G00316800
rosa_rugosa	Rorug01G0114300
rosa_samantha	Rh1AG139500 Rh1BG105700 Rh1CG131400 Rh1DG143400
rosa_wichuraiana	Rw1G011500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2246
AccB7I	CCANNNNNTGG	1 cut(s)	2393
AccII	CGCG	1 cut(s)	55
AciI	CCGC	4 cut(s)	55, 505, 2240, 2257
AclI	AACGTT	1 cut(s)	2345
AclWI	GGATC	4 cut(s)	456, 1316, 1650, 1805
AcoI	YGGCCR	3 cut(s)	2082, 2329, 2384
AcsI	RAATTY	3 cut(s)	479, 622, 1537
AcuI	CTGAAG	2 cut(s)	317, 1134
AcvI	CACGTG	1 cut(s)	551
AcyI	GRCGYC	2 cut(s)	24, 2109
AfaI	GTAC	5 cut(s)	427, 871, 1260, 1722, 2127
AflIII	ACRYGT	1 cut(s)	1186
AgsI	TTSAA	9 cut(s)	104, 572, 701, 1193, 1542, 1819, 1928, 2157, 2286
AjiI	CACGTC	1 cut(s)	1116
AjnI	CCWGG	1 cut(s)	2072
AjuI	GAANNNNNNNTTGG	2 cut(s)	1869, 1901
AloI	GAACNNNNNNTCC	2 cut(s)	1940, 1972
Alw21I	GWGCWC	2 cut(s)	1794, 2404
Alw26I	GTCTC	5 cut(s)	388, 806, 1041, 1093, 1515
Alw44I	GTGCAC	1 cut(s)	1790
AlwI	GGATC	4 cut(s)	456, 1316, 1650, 1805
AlwNI	CAGNNNCTG	2 cut(s)	1357, 2134
AoxI	GGCC	8 cut(s)	6, 68, 911, 1461, 1871, 2082, 2329, 2384
ApaLI	GTGCAC	1 cut(s)	1790
ApoI	RAATTY	3 cut(s)	479, 622, 1537
Asp700I	GAANNNNTTC	1 cut(s)	696
AspLEI	GCGC	2 cut(s)	1519, 2174
AspS9I	GGNCC	8 cut(s)	36, 57, 69, 470, 543, 1829, 1872, 2146
AsuHPI	GGTGA	3 cut(s)	256, 1379, 1479
AvaII	GGWCC	6 cut(s)	36, 57, 470, 543, 1829, 2146
BaeGI	GKGCMC	1 cut(s)	1794
BaeI	ACNNNNGTAYC	4 cut(s)	861, 894, 1586, 1619
BalI	TGGCCA	2 cut(s)	2084, 2386
BanI	GGYRCC	1 cut(s)	2246
BarI	GAAGNNNNNNTAC	2 cut(s)	1132, 1164
BauI	CACGAG	1 cut(s)	1227
BbrPI	CACGTG	1 cut(s)	551
BbsI	GAAGAC	1 cut(s)	182
Bbv12I	GWGCWC	2 cut(s)	1794, 2404
BceAI	ACGGC	2 cut(s)	2108, 2159
BciT130I	CCWGG	1 cut(s)	2074
BciVI	GTATCC	1 cut(s)	1614
BcoDI	GTCTC	5 cut(s)	388, 806, 1041, 1093, 1515
BfaI	CTAG	2 cut(s)	213, 929
BfmI	CTRYAG	3 cut(s)	735, 1565, 2034
BfoI	RGCGCY	1 cut(s)	1520
BfuI	GTATCC	1 cut(s)	1614
BglI	GCCNNNNNGGC	2 cut(s)	2090, 2358
BlpI	GCTNAGC	1 cut(s)	2068
Bme1390I	CCNGG	1 cut(s)	2074
Bme18I	GGWCC	6 cut(s)	36, 57, 470, 543, 1829, 2146
BmgBI	CACGTC	1 cut(s)	1116
BmgT120I	GGNCC	8 cut(s)	36, 57, 69, 470, 543, 1829, 1872, 2146
BmiI	GGNNCC	4 cut(s)	544, 669, 1874, 2248
BmrFI	CCNGG	1 cut(s)	2074
BmrI	ACTGGG	4 cut(s)	1172, 1353, 1485, 2144
BmsI	GCATC	9 cut(s)	400, 563, 895, 1256, 1717, 1727, 2129, 2210, 2299
BmuI	ACTGGG	4 cut(s)	1172, 1353, 1485, 2144
BoxI	GACNNNNGTC	1 cut(s)	362
BpiI	GAAGAC	1 cut(s)	182
BpmI	CTGGAG	4 cut(s)	153, 1455, 1463, 1827
Bpu10I	CCTNAGC	1 cut(s)	1133
Bpu1102I	GCTNAGC	1 cut(s)	2068
BpuEI	CTTGAG	3 cut(s)	1117, 1497, 1896
BsaAI	YACGTR	2 cut(s)	551, 1766
BsaHI	GRCGYC	2 cut(s)	24, 2109
BsaI	GGTCTC	1 cut(s)	806
BsaXI	ACNNNNNCTCC	2 cut(s)	598, 628
Bse118I	RCCGGY	3 cut(s)	11, 46, 2379
Bse1I	ACTGG	8 cut(s)	38, 1167, 1348, 1472, 1480, 1491, 2139, 2416
Bse3DI	GCAATG	2 cut(s)	1026, 1718
BseBI	CCWGG	1 cut(s)	2074
BseMI	GCAATG	2 cut(s)	1026, 1718
BseMII	CTCAG	7 cut(s)	191, 948, 975, 1057, 1304, 2082, 2417
BseNI	ACTGG	8 cut(s)	38, 1167, 1348, 1472, 1480, 1491, 2139, 2416
BseRI	GAGGAG	1 cut(s)	832
BseSI	GKGCMC	1 cut(s)	1794
BseYI	CCCAGC	1 cut(s)	18
BsgI	GTGCAG	1 cut(s)	831
Bsh1236I	CGCG	1 cut(s)	55
BshFI	GGCC	8 cut(s)	8, 70, 913, 1463, 1873, 2084, 2331, 2386
BshNI	GGYRCC	1 cut(s)	2246
BsiHKAI	GWGCWC	2 cut(s)	1794, 2404
BsiSI	CCGG	3 cut(s)	12, 47, 2380
BslFI	GGGAC	4 cut(s)	35, 1181, 1292, 1884
BsmAI	GTCTC	5 cut(s)	388, 806, 1041, 1093, 1515
BsmFI	GGGAC	4 cut(s)	35, 1181, 1292, 1884
BsnI	GGCC	8 cut(s)	8, 70, 913, 1463, 1873, 2084, 2331, 2386
Bso31I	GGTCTC	1 cut(s)	806
Bsp1286I	GDGCHC	2 cut(s)	1794, 2404
Bsp1407I	TGTACA	2 cut(s)	425, 1258
Bsp143I	GATC	5 cut(s)	448, 1321, 1399, 1642, 1810
Bsp1720I	GCTNAGC	1 cut(s)	2068
BspACI	CCGC	4 cut(s)	55, 505, 2240, 2257
BspANI	GGCC	8 cut(s)	8, 70, 913, 1463, 1873, 2084, 2331, 2386
BspCNI	CTCAG	7 cut(s)	192, 949, 976, 1056, 1303, 2081, 2416
BspFNI	CGCG	1 cut(s)	55
BspHI	TCATGA	1 cut(s)	804
BspLI	GGNNCC	4 cut(s)	544, 669, 1874, 2248
BspMAI	CTGCAG	2 cut(s)	1569, 2038
BspPI	GGATC	4 cut(s)	456, 1316, 1650, 1805
BspT107I	GGYRCC	1 cut(s)	2246
BspTNI	GGTCTC	1 cut(s)	806
BsrDI	GCAATG	2 cut(s)	1026, 1718
BsrFI	RCCGGY	3 cut(s)	11, 46, 2379
BsrGI	TGTACA	2 cut(s)	425, 1258
BsrI	ACTGG	8 cut(s)	38, 1167, 1348, 1472, 1480, 1491, 2139, 2416
BssAI	RCCGGY	3 cut(s)	11, 46, 2379
BssMI	GATC	5 cut(s)	448, 1321, 1399, 1642, 1810
BssNI	GRCGYC	2 cut(s)	24, 2109
BssSI	CACGAG	1 cut(s)	1227
Bst2BI	CACGAG	1 cut(s)	1227
Bst2UI	CCWGG	1 cut(s)	2074
Bst4CI	ACNGT	8 cut(s)	243, 780, 877, 1172, 1826, 2130, 2162, 2293
BstACI	GRCGYC	2 cut(s)	24, 2109
BstAPI	GCANNNNNTGC	2 cut(s)	773, 1754
BstAUI	TGTACA	2 cut(s)	425, 1258
BstBAI	YACGTR	2 cut(s)	551, 1766
BstC8I	GCNNGC	9 cut(s)	98, 163, 731, 1412, 1416, 1461, 2095, 2121, 2363
BstEII	GGTNACC	2 cut(s)	1127, 1385
BstENI	CCTNNNNNAGG	1 cut(s)	203
BstFNI	CGCG	1 cut(s)	55
BstH2I	RGCGCY	1 cut(s)	1520
BstHHI	GCGC	2 cut(s)	1519, 2174
BstKTI	GATC	5 cut(s)	451, 1324, 1402, 1645, 1813
BstMAI	GTCTC	5 cut(s)	388, 806, 1041, 1093, 1515
BstMBI	GATC	5 cut(s)	448, 1321, 1399, 1642, 1810
BstNI	CCWGG	1 cut(s)	2074
BstNSI	RCATGY	8 cut(s)	83, 401, 1019, 1190, 1414, 1744, 2365, 2393
BstPAI	GACNNNNGTC	1 cut(s)	362
BstPI	GGTNACC	2 cut(s)	1127, 1385
BstSCI	CCNGG	1 cut(s)	2072
BstSFI	CTRYAG	3 cut(s)	735, 1565, 2034
BstSLI	GKGCMC	1 cut(s)	1794
BstUI	CGCG	1 cut(s)	55
BstV2I	GAAGAC	1 cut(s)	182
BstX2I	RGATCY	2 cut(s)	448, 1642
BstXI	CCANNNNNNTGG	3 cut(s)	1869, 2020, 2080
BstYI	RGATCY	2 cut(s)	448, 1642
BsuI	GTATCC	1 cut(s)	1614
BsuRI	GGCC	8 cut(s)	8, 70, 913, 1463, 1873, 2084, 2331, 2386
BtrI	CACGTC	1 cut(s)	1116
BtsI	GCAGTG	1 cut(s)	1574
BtsIMutI	CAGTG	9 cut(s)	1158, 1160, 1177, 1257, 1355, 1512, 1574, 2132, 2167
Cac8I	GCNNGC	9 cut(s)	98, 163, 731, 1412, 1416, 1461, 2095, 2121, 2363
CaiI	CAGNNNCTG	2 cut(s)	1357, 2134
CciI	TCATGA	1 cut(s)	804
CfoI	GCGC	2 cut(s)	1519, 2174
Cfr10I	RCCGGY	3 cut(s)	11, 46, 2379
Cfr13I	GGNCC	8 cut(s)	36, 57, 69, 470, 543, 1829, 1872, 2146
CpoI	CGGWCCG	1 cut(s)	57
CseI	GACGC	2 cut(s)	32, 2117
Csp6I	GTAC	5 cut(s)	426, 870, 1259, 1721, 2126
CspI	CGGWCCG	1 cut(s)	57
CviQI	GTAC	5 cut(s)	426, 870, 1259, 1721, 2126
DpnI	GATC	5 cut(s)	450, 1323, 1401, 1644, 1812
DpnII	GATC	5 cut(s)	448, 1321, 1399, 1642, 1810
DraI	TTTAAA	1 cut(s)	2229
EaeI	YGGCCR	3 cut(s)	2082, 2329, 2384
Eco147I	AGGCCT	2 cut(s)	913, 1463
Eco31I	GGTCTC	1 cut(s)	806
Eco47I	GGWCC	6 cut(s)	36, 57, 470, 543, 1829, 2146
Eco57I	CTGAAG	2 cut(s)	317, 1134
Eco72I	CACGTG	1 cut(s)	551
Eco91I	GGTNACC	2 cut(s)	1127, 1385
EcoNI	CCTNNNNNAGG	1 cut(s)	203
EcoO109I	RGGNCCY	1 cut(s)	543
EcoO65I	GGTNACC	2 cut(s)	1127, 1385
EcoRI	GAATTC	1 cut(s)	1537
EcoRII	CCWGG	1 cut(s)	2072
EcoT22I	ATGCAT	2 cut(s)	415, 1742
FalI	AAGNNNNNCTT	6 cut(s)	681, 713, 1075, 1107, 2135, 2167
FaqI	GGGAC	4 cut(s)	35, 1181, 1292, 1884
FauI	CCCGC	1 cut(s)	2250
FspBI	CTAG	2 cut(s)	213, 929
GlaI	GCGC	2 cut(s)	1518, 2173
GsaI	CCCAGC	1 cut(s)	22
GsuI	CTGGAG	4 cut(s)	153, 1455, 1463, 1827
HaeII	RGCGCY	1 cut(s)	1520
HaeIII	GGCC	8 cut(s)	8, 70, 913, 1463, 1873, 2084, 2331, 2386
HapII	CCGG	3 cut(s)	12, 47, 2380
HgaI	GACGC	2 cut(s)	32, 2117
HhaI	GCGC	2 cut(s)	1519, 2174
Hin1I	GRCGYC	2 cut(s)	24, 2109
Hin6I	GCGC	2 cut(s)	1517, 2172
HinP1I	GCGC	2 cut(s)	1517, 2172
HincII	GTYRAC	2 cut(s)	1158, 2179
HindII	GTYRAC	2 cut(s)	1158, 2179
HindIII	AAGCTT	1 cut(s)	702
HinfI	GANTC	7 cut(s)	283, 313, 959, 1041, 1241, 1652, 2024
HpaII	CCGG	3 cut(s)	12, 47, 2380
HphI	GGTGA	3 cut(s)	256, 1379, 1479
Hpy166II	GTNNAC	8 cut(s)	264, 426, 1158, 1721, 1792, 1832, 2149, 2179
Hpy188III	TCNNGA	8 cut(s)	132, 199, 321, 380, 468, 755, 805, 1096
Hpy8I	GTNNAC	8 cut(s)	264, 426, 1158, 1721, 1792, 1832, 2149, 2179
HpyAV	CCTTC	3 cut(s)	483, 1077, 1452
HpyCH4III	ACNGT	8 cut(s)	243, 780, 877, 1172, 1826, 2130, 2162, 2293
HpyCH4IV	ACGT	4 cut(s)	550, 1115, 1765, 2345
HpySE526I	ACGT	4 cut(s)	550, 1115, 1765, 2345
Hsp92I	GRCGYC	2 cut(s)	24, 2109
HspAI	GCGC	2 cut(s)	1517, 2172
Kzo9I	GATC	5 cut(s)	448, 1321, 1399, 1642, 1810
LmnI	GCTCC	2 cut(s)	764, 1474
LweI	GCATC	9 cut(s)	400, 563, 895, 1256, 1717, 1727, 2129, 2210, 2299
MaeI	CTAG	2 cut(s)	213, 929
MaeII	ACGT	4 cut(s)	550, 1115, 1765, 2345
MalI	GATC	5 cut(s)	450, 1323, 1401, 1644, 1812
MboI	GATC	5 cut(s)	448, 1321, 1399, 1642, 1810
MboII	GAAGA	9 cut(s)	182, 323, 515, 584, 701, 957, 1617, 1877, 2196
MfeI	CAATTG	3 cut(s)	252, 1589, 2325
MflI	RGATCY	2 cut(s)	448, 1642
MhlI	GDGCHC	2 cut(s)	1794, 2404
MlsI	TGGCCA	2 cut(s)	2084, 2386
MluNI	TGGCCA	2 cut(s)	2084, 2386
MlyI	GAGTC	5 cut(s)	307, 968, 1035, 1250, 1646
MmeI	TCCRAC	2 cut(s)	732, 1897
Mox20I	TGGCCA	2 cut(s)	2084, 2386
Mph1103I	ATGCAT	2 cut(s)	415, 1742
MroXI	GAANNNNTTC	1 cut(s)	696
MscI	TGGCCA	2 cut(s)	2084, 2386
MseI	TTAA	7 cut(s)	147, 879, 1181, 1340, 2018, 2030, 2228
MslI	CAYNNNNRTG	4 cut(s)	1266, 2018, 2137, 2294
Msp20I	TGGCCA	2 cut(s)	2084, 2386
MspA1I	CMGCKG	4 cut(s)	18, 1294, 1418, 2257
MspI	CCGG	3 cut(s)	12, 47, 2380
MspR9I	CCNGG	1 cut(s)	2074
MunI	CAATTG	3 cut(s)	252, 1589, 2325
MvaI	CCWGG	1 cut(s)	2074
MvnI	CGCG	1 cut(s)	55
NdeII	GATC	5 cut(s)	448, 1321, 1399, 1642, 1810
NlaIV	GGNNCC	4 cut(s)	544, 669, 1874, 2248
NmeAIII	GCCGAG	3 cut(s)	46, 133, 2357
NmuCI	GTSAC	4 cut(s)	175, 1385, 2105, 2130
NsiI	ATGCAT	2 cut(s)	415, 1742
NspI	RCATGY	8 cut(s)	83, 401, 1019, 1190, 1414, 1744, 2365, 2393
PaeI	GCATGC	2 cut(s)	1414, 2365
PagI	TCATGA	1 cut(s)	804
PceI	AGGCCT	2 cut(s)	913, 1463
PciI	ACATGT	1 cut(s)	1186
PcsI	WCGNNNNNNNCGW	1 cut(s)	2351
PdmI	GAANNNNTTC	1 cut(s)	696
PfeI	GAWTC	2 cut(s)	283, 2024
PflMI	CCANNNNNTGG	1 cut(s)	2393
PleI	GAGTC	5 cut(s)	307, 967, 1035, 1249, 1646
PmaCI	CACGTG	1 cut(s)	551
PmlI	CACGTG	1 cut(s)	551
PpsI	GAGTC	5 cut(s)	307, 967, 1035, 1249, 1646
Ppu21I	YACGTR	2 cut(s)	551, 1766
PpuMI	RGGWCCY	1 cut(s)	543
PscI	ACATGT	1 cut(s)	1186
PshAI	GACNNNNGTC	1 cut(s)	362
Psp1406I	AACGTT	1 cut(s)	2345
Psp5II	RGGWCCY	1 cut(s)	543
Psp6I	CCWGG	1 cut(s)	2072
PspCI	CACGTG	1 cut(s)	551
PspEI	GGTNACC	2 cut(s)	1127, 1385
PspFI	CCCAGC	1 cut(s)	18
PspGI	CCWGG	1 cut(s)	2072
PspN4I	GGNNCC	4 cut(s)	544, 669, 1874, 2248
PspPI	GGNCC	8 cut(s)	36, 57, 69, 470, 543, 1829, 1872, 2146
PspPPI	RGGWCCY	1 cut(s)	543
PstI	CTGCAG	2 cut(s)	1569, 2038
PstNI	CAGNNNCTG	2 cut(s)	1357, 2134
PsuI	RGATCY	2 cut(s)	448, 1642
PvuII	CAGCTG	3 cut(s)	18, 1294, 1418
RsaI	GTAC	5 cut(s)	427, 871, 1260, 1722, 2127
RsaNI	GTAC	5 cut(s)	426, 870, 1259, 1721, 2126
RseI	CAYNNNNRTG	4 cut(s)	1266, 2018, 2137, 2294
Rsr2I	CGGWCCG	1 cut(s)	57
RsrII	CGGWCCG	1 cut(s)	57
SaqAI	TTAA	7 cut(s)	147, 879, 1181, 1340, 2018, 2030, 2228
Sau3AI	GATC	5 cut(s)	448, 1321, 1399, 1642, 1810
Sau96I	GGNCC	8 cut(s)	36, 57, 69, 470, 543, 1829, 1872, 2146
SchI	GAGTC	5 cut(s)	307, 968, 1035, 1250, 1646
ScrFI	CCNGG	1 cut(s)	2074
SduI	GDGCHC	2 cut(s)	1794, 2404
SfaNI	GCATC	9 cut(s)	400, 563, 895, 1256, 1717, 1727, 2129, 2210, 2299
SfcI	CTRYAG	3 cut(s)	735, 1565, 2034
SinI	GGWCC	6 cut(s)	36, 57, 470, 543, 1829, 2146
SmiMI	CAYNNNNRTG	4 cut(s)	1266, 2018, 2137, 2294
SmlI	CTYRAG	3 cut(s)	1096, 1512, 1911
SmoI	CTYRAG	3 cut(s)	1096, 1512, 1911
SphI	GCATGC	2 cut(s)	1414, 2365
SseBI	AGGCCT	2 cut(s)	913, 1463
SsiI	CCGC	4 cut(s)	55, 505, 2240, 2257
SspI	AATATT	1 cut(s)	405
SspMI	CTAG	2 cut(s)	213, 929
StuI	AGGCCT	2 cut(s)	913, 1463
StyD4I	CCNGG	1 cut(s)	2072
TaaI	ACNGT	8 cut(s)	243, 780, 877, 1172, 1826, 2130, 2162, 2293
TaiI	ACGT	4 cut(s)	553, 1118, 1768, 2348
TaqI	TCGA	4 cut(s)	30, 916, 1402, 2184
TatI	WGTACW	2 cut(s)	425, 1258
TfiI	GAWTC	2 cut(s)	283, 2024
Tru1I	TTAA	7 cut(s)	147, 879, 1181, 1340, 2018, 2030, 2228
Tru9I	TTAA	7 cut(s)	147, 879, 1181, 1340, 2018, 2030, 2228
TscAI	CASTG	9 cut(s)	1158, 1167, 1177, 1257, 1362, 1512, 1574, 2139, 2167
TseFI	GTSAC	4 cut(s)	175, 1385, 2105, 2130
Tsp45I	GTSAC	4 cut(s)	175, 1385, 2105, 2130
TspDTI	ATGAA	6 cut(s)	575, 702, 824, 846, 1062, 1491
TspGWI	ACGGA	3 cut(s)	49, 167, 1612
TspRI	CASTG	9 cut(s)	1158, 1167, 1177, 1257, 1362, 1512, 1574, 2139, 2167
Van91I	CCANNNNNTGG	1 cut(s)	2393
VneI	GTGCAC	1 cut(s)	1790
VpaK11BI	GGWCC	6 cut(s)	36, 57, 470, 543, 1829, 2146
XagI	CCTNNNNNAGG	1 cut(s)	203
XapI	RAATTY	3 cut(s)	479, 622, 1537
XceI	RCATGY	8 cut(s)	83, 401, 1019, 1190, 1414, 1744, 2365, 2393
XcmI	CCANNNNNNNNNTGG	2 cut(s)	441, 794
XmnI	GAANNNNTTC	1 cut(s)	696
XspI	CTAG	2 cut(s)	213, 929
Zsp2I	ATGCAT	2 cut(s)	415, 1742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.