Diaminopimelate epimerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G53580 |
| fragaria_vesca | FvH4_6g14490 |
| malus_domestica | MD04G1119400.v1.1 MD07G1084600.v1.1 MD07G1085800.v1.1 MD12G1136700.v1.1 |
| prunus_persica | Prupe.6G249100_v2.0.a1 Prupe.6G249100_v2.0.a1 |
| pyrus_communis | pycom04g10870 pycom07g06870 pycom12g13120 |
| rosa_chinensis | RchiOBHm_Chr3g0467571 |
| rosa_laevigata | RLG00000024489 |
| rosa_multiflora | Rmu_sc0000679.1_g000030 Rmu_sc0011632.1_g000016 |
| rosa_roxburghii | Rroxscaffold_6G00413580 |
| rosa_rugosa | Rorug03G0088200 |
| rosa_samantha | Rh3AG136200 Rh3BG158100 Rh3CG157900 Rh3DG158700 |
| rosa_wichuraiana | Rw3G012930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 365 |
| AccBSI | CCGCTC | 1 cut(s) | 54 |
| AccII | CGCG | 3 cut(s) | 136, 153, 386 |
| AccIII | TCCGGA | 3 cut(s) | 233, 322, 559 |
| AcsI | RAATTY | 4 cut(s) | 505, 564, 763, 848 |
| AcuI | CTGAAG | 1 cut(s) | 603 |
| AcyI | GRCGYC | 1 cut(s) | 366 |
| AfaI | GTAC | 4 cut(s) | 257, 534, 627, 748 |
| AflII | CTTAAG | 1 cut(s) | 611 |
| AgsI | TTSAA | 3 cut(s) | 569, 769, 784 |
| AjnI | CCWGG | 2 cut(s) | 282, 695 |
| AluBI | AGCT | 7 cut(s) | 106, 125, 140, 340, 499, 525, 935 |
| AluI | AGCT | 7 cut(s) | 106, 125, 140, 340, 499, 525, 935 |
| Alw21I | GWGCWC | 1 cut(s) | 501 |
| Ama87I | CYCGRG | 2 cut(s) | 449, 500 |
| Aor13HI | TCCGGA | 3 cut(s) | 233, 322, 559 |
| AoxI | GGCC | 5 cut(s) | 198, 262, 757, 799, 1012 |
| ApeKI | GCWGC | 3 cut(s) | 122, 125, 388 |
| ApoI | RAATTY | 4 cut(s) | 505, 564, 763, 848 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 606 |
| AspLEI | GCGC | 2 cut(s) | 368, 388 |
| AspS9I | GGNCC | 2 cut(s) | 800, 1012 |
| AsuC2I | CCSGG | 2 cut(s) | 393, 1007 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| AvaI | CYCGRG | 2 cut(s) | 449, 500 |
| BanI | GGYRCC | 1 cut(s) | 365 |
| BanII | GRGCYC | 2 cut(s) | 450, 501 |
| BbsI | GAAGAC | 1 cut(s) | 140 |
| Bbv12I | GWGCWC | 1 cut(s) | 501 |
| BbvI | GCAGC | 3 cut(s) | 112, 134, 375 |
| BccI | CCATC | 4 cut(s) | 29, 431, 569, 680 |
| BceAI | ACGGC | 3 cut(s) | 277, 418, 533 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 111, 145 |
| BciT130I | CCWGG | 2 cut(s) | 284, 697 |
| BcnI | CCSGG | 2 cut(s) | 393, 1007 |
| BfmI | CTRYAG | 1 cut(s) | 942 |
| BfoI | RGCGCY | 1 cut(s) | 369 |
| BfrI | CTTAAG | 1 cut(s) | 611 |
| BisI | GCNGC | 8 cut(s) | 15, 52, 123, 126, 134, 333, 389, 954 |
| BlpI | GCTNAGC | 1 cut(s) | 975 |
| BlsI | GCNGC | 8 cut(s) | 16, 53, 124, 127, 135, 334, 390, 955 |
| Bme1390I | CCNGG | 4 cut(s) | 284, 393, 697, 1007 |
| BmeT110I | CYCGRG | 2 cut(s) | 449, 500 |
| BmgT120I | GGNCC | 2 cut(s) | 800, 1012 |
| BmiI | GGNNCC | 6 cut(s) | 7, 309, 367, 603, 802, 1013 |
| BmrFI | CCNGG | 4 cut(s) | 284, 393, 697, 1007 |
| BmsI | GCATC | 2 cut(s) | 405, 873 |
| BpiI | GAAGAC | 1 cut(s) | 140 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 185, 217 |
| BpmI | CTGGAG | 1 cut(s) | 951 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 975 |
| BpuEI | CTTGAG | 1 cut(s) | 983 |
| BpuMI | CCSGG | 2 cut(s) | 393, 1007 |
| Bsa29I | ATCGAT | 1 cut(s) | 997 |
| BsaHI | GRCGYC | 1 cut(s) | 366 |
| BsaJI | CCNNGG | 3 cut(s) | 259, 265, 1006 |
| BsaWI | WCCGGW | 4 cut(s) | 233, 322, 471, 559 |
| Bse1I | ACTGG | 3 cut(s) | 144, 544, 934 |
| Bse3DI | GCAATG | 3 cut(s) | 489, 730, 1015 |
| BseAI | TCCGGA | 3 cut(s) | 233, 322, 559 |
| BseBI | CCWGG | 2 cut(s) | 284, 697 |
| BseCI | ATCGAT | 1 cut(s) | 997 |
| BseDI | CCNNGG | 3 cut(s) | 259, 265, 1006 |
| BseGI | GGATG | 2 cut(s) | 279, 691 |
| BseMI | GCAATG | 3 cut(s) | 489, 730, 1015 |
| BseMII | CTCAG | 1 cut(s) | 966 |
| BseNI | ACTGG | 3 cut(s) | 144, 544, 934 |
| BseRI | GAGGAG | 1 cut(s) | 1051 |
| BseXI | GCAGC | 3 cut(s) | 112, 134, 375 |
| BsgI | GTGCAG | 2 cut(s) | 14, 970 |
| Bsh1236I | CGCG | 3 cut(s) | 136, 153, 386 |
| Bsh1285I | CGRYCG | 1 cut(s) | 223 |
| BshFI | GGCC | 5 cut(s) | 200, 264, 759, 801, 1014 |
| BshNI | GGYRCC | 1 cut(s) | 365 |
| BshVI | ATCGAT | 1 cut(s) | 997 |
| BsiEI | CGRYCG | 1 cut(s) | 223 |
| BsiHKAI | GWGCWC | 1 cut(s) | 501 |
| BsiHKCI | CYCGRG | 2 cut(s) | 449, 500 |
| BsiSI | CCGG | 6 cut(s) | 234, 323, 392, 472, 560, 1006 |
| BslFI | GGGAC | 1 cut(s) | 528 |
| BsmFI | GGGAC | 1 cut(s) | 528 |
| BsnI | GGCC | 5 cut(s) | 200, 264, 759, 801, 1014 |
| BsoBI | CYCGRG | 2 cut(s) | 449, 500 |
| Bsp1286I | GDGCHC | 2 cut(s) | 450, 501 |
| Bsp13I | TCCGGA | 3 cut(s) | 233, 322, 559 |
| Bsp143I | GATC | 5 cut(s) | 346, 378, 652, 994, 998 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 975 |
| BspANI | GGCC | 5 cut(s) | 200, 264, 759, 801, 1014 |
| BspCNI | CTCAG | 1 cut(s) | 967 |
| BspDI | ATCGAT | 1 cut(s) | 997 |
| BspEI | TCCGGA | 3 cut(s) | 233, 322, 559 |
| BspFNI | CGCG | 3 cut(s) | 136, 153, 386 |
| BspHI | TCATGA | 1 cut(s) | 817 |
| BspLI | GGNNCC | 6 cut(s) | 7, 309, 367, 603, 802, 1013 |
| BspT107I | GGYRCC | 1 cut(s) | 365 |
| BspTI | CTTAAG | 1 cut(s) | 611 |
| BsrBI | CCGCTC | 1 cut(s) | 54 |
| BsrDI | GCAATG | 3 cut(s) | 489, 730, 1015 |
| BsrI | ACTGG | 3 cut(s) | 144, 544, 934 |
| BssECI | CCNNGG | 3 cut(s) | 259, 265, 1006 |
| BssMI | GATC | 5 cut(s) | 346, 378, 652, 994, 998 |
| BssNI | GRCGYC | 1 cut(s) | 366 |
| Bst2UI | CCWGG | 2 cut(s) | 284, 697 |
| Bst4CI | ACNGT | 1 cut(s) | 991 |
| Bst6I | CTCTTC | 1 cut(s) | 84 |
| BstACI | GRCGYC | 1 cut(s) | 366 |
| BstAFI | CTTAAG | 1 cut(s) | 611 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 917 |
| BstC8I | GCNNGC | 5 cut(s) | 138, 330, 446, 642, 922 |
| BstDEI | CTNAG | 1 cut(s) | 975 |
| BstDSI | CCRYGG | 1 cut(s) | 259 |
| BstF5I | GGATG | 2 cut(s) | 279, 691 |
| BstFNI | CGCG | 3 cut(s) | 136, 153, 386 |
| BstH2I | RGCGCY | 1 cut(s) | 369 |
| BstHHI | GCGC | 2 cut(s) | 368, 388 |
| BstKTI | GATC | 5 cut(s) | 349, 381, 655, 997, 1001 |
| BstMBI | GATC | 5 cut(s) | 346, 378, 652, 994, 998 |
| BstMCI | CGRYCG | 1 cut(s) | 223 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 14, 206, 402, 517, 917 |
| BstNI | CCWGG | 2 cut(s) | 284, 697 |
| BstSCI | CCNGG | 4 cut(s) | 282, 391, 695, 1005 |
| BstSFI | CTRYAG | 1 cut(s) | 942 |
| BstUI | CGCG | 3 cut(s) | 136, 153, 386 |
| BstV1I | GCAGC | 3 cut(s) | 112, 134, 375 |
| BstV2I | GAAGAC | 1 cut(s) | 140 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 181 |
| Bsu15I | ATCGAT | 1 cut(s) | 997 |
| BsuRI | GGCC | 5 cut(s) | 200, 264, 759, 801, 1014 |
| BsuTUI | ATCGAT | 1 cut(s) | 997 |
| BtgI | CCRYGG | 1 cut(s) | 259 |
| BtsCI | GGATG | 2 cut(s) | 279, 691 |
| BtsI | GCAGTG | 1 cut(s) | 26 |
| BtsIMutI | CAGTG | 2 cut(s) | 26, 405 |
| Cac8I | GCNNGC | 5 cut(s) | 138, 330, 446, 642, 922 |
| CciI | TCATGA | 1 cut(s) | 817 |
| CfoI | GCGC | 2 cut(s) | 368, 388 |
| Cfr13I | GGNCC | 2 cut(s) | 800, 1012 |
| ClaI | ATCGAT | 1 cut(s) | 997 |
| Csp6I | GTAC | 4 cut(s) | 256, 533, 626, 747 |
| CviAII | CATG | 5 cut(s) | 119, 168, 175, 818, 1056 |
| CviQI | GTAC | 4 cut(s) | 256, 533, 626, 747 |
| DdeI | CTNAG | 1 cut(s) | 975 |
| DinI | GGCGCC | 1 cut(s) | 367 |
| DpnI | GATC | 5 cut(s) | 348, 380, 654, 996, 1000 |
| DpnII | GATC | 5 cut(s) | 346, 378, 652, 994, 998 |
| DraI | TTTAAA | 1 cut(s) | 529 |
| Eam1104I | CTCTTC | 1 cut(s) | 84 |
| EarI | CTCTTC | 1 cut(s) | 84 |
| Ecl136II | GAGCTC | 1 cut(s) | 499 |
| Eco147I | AGGCCT | 1 cut(s) | 200 |
| Eco24I | GRGCYC | 2 cut(s) | 450, 501 |
| Eco53kI | GAGCTC | 1 cut(s) | 499 |
| Eco57I | CTGAAG | 1 cut(s) | 603 |
| Eco88I | CYCGRG | 2 cut(s) | 449, 500 |
| EcoICRI | GAGCTC | 1 cut(s) | 499 |
| EcoRII | CCWGG | 2 cut(s) | 282, 695 |
| EcoT38I | GRGCYC | 2 cut(s) | 450, 501 |
| EgeI | GGCGCC | 1 cut(s) | 367 |
| EheI | GGCGCC | 1 cut(s) | 367 |
| FaeI | CATG | 5 cut(s) | 122, 171, 178, 821, 1059 |
| FaqI | GGGAC | 1 cut(s) | 528 |
| FatI | CATG | 5 cut(s) | 118, 167, 174, 817, 1055 |
| FauI | CCCGC | 1 cut(s) | 214 |
| Fnu4HI | GCNGC | 8 cut(s) | 15, 52, 123, 126, 134, 333, 389, 954 |
| FokI | GGATG | 2 cut(s) | 266, 698 |
| FriOI | GRGCYC | 2 cut(s) | 450, 501 |
| Fsp4HI | GCNGC | 8 cut(s) | 15, 52, 123, 126, 134, 333, 389, 954 |
| GlaI | GCGC | 2 cut(s) | 367, 387 |
| GluI | GCNGC | 8 cut(s) | 15, 52, 123, 126, 134, 333, 389, 954 |
| GsuI | CTGGAG | 1 cut(s) | 951 |
| HaeII | RGCGCY | 1 cut(s) | 369 |
| HaeIII | GGCC | 5 cut(s) | 200, 264, 759, 801, 1014 |
| HapII | CCGG | 6 cut(s) | 234, 323, 392, 472, 560, 1006 |
| HhaI | GCGC | 2 cut(s) | 368, 388 |
| Hin1I | GRCGYC | 1 cut(s) | 366 |
| Hin1II | CATG | 5 cut(s) | 122, 171, 178, 821, 1059 |
| Hin6I | GCGC | 2 cut(s) | 366, 386 |
| HinP1I | GCGC | 2 cut(s) | 366, 386 |
| HinfI | GANTC | 8 cut(s) | 97, 185, 230, 237, 299, 468, 486, 814 |
| HpaII | CCGG | 6 cut(s) | 234, 323, 392, 472, 560, 1006 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy188I | TCNGA | 6 cut(s) | 96, 307, 351, 436, 622, 678 |
| Hpy188III | TCNNGA | 9 cut(s) | 193, 218, 234, 323, 502, 560, 569, 818, 962 |
| Hpy99I | CGWCG | 3 cut(s) | 194, 374, 665 |
| HpyAV | CCTTC | 6 cut(s) | 96, 190, 220, 574, 746, 763 |
| HpyCH4III | ACNGT | 1 cut(s) | 991 |
| HpyCH4IV | ACGT | 1 cut(s) | 624 |
| HpyCH4V | TGCA | 8 cut(s) | 31, 122, 511, 644, 735, 856, 987, 1020 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 14, 206, 402, 517, 917 |
| HpyF3I | CTNAG | 1 cut(s) | 975 |
| HpySE526I | ACGT | 1 cut(s) | 624 |
| Hsp92I | GRCGYC | 1 cut(s) | 366 |
| Hsp92II | CATG | 5 cut(s) | 122, 171, 178, 821, 1059 |
| HspAI | GCGC | 2 cut(s) | 366, 386 |
| KasI | GGCGCC | 1 cut(s) | 365 |
| Kpn2I | TCCGGA | 3 cut(s) | 233, 322, 559 |
| Kzo9I | GATC | 5 cut(s) | 346, 378, 652, 994, 998 |
| LmnI | GCTCC | 8 cut(s) | 5, 59, 307, 325, 895, 902, 908, 932 |
| Lsp1109I | GCAGC | 3 cut(s) | 112, 134, 375 |
| LweI | GCATC | 2 cut(s) | 405, 873 |
| MaeII | ACGT | 1 cut(s) | 624 |
| MaeIII | GTNAC | 2 cut(s) | 691, 703 |
| MalI | GATC | 5 cut(s) | 348, 380, 654, 996, 1000 |
| MbiI | CCGCTC | 1 cut(s) | 54 |
| MboI | GATC | 5 cut(s) | 346, 378, 652, 994, 998 |
| MboII | GAAGA | 7 cut(s) | 58, 71, 81, 140, 294, 373, 584 |
| MhlI | GDGCHC | 2 cut(s) | 450, 501 |
| MluCI | AATT | 9 cut(s) | 430, 505, 552, 564, 606, 763, 779, 795, 848 |
| Mly113I | GGCGCC | 1 cut(s) | 366 |
| MlyI | GAGTC | 1 cut(s) | 477 |
| MroI | TCCGGA | 3 cut(s) | 233, 322, 559 |
| MroXI | GAANNNNTTC | 1 cut(s) | 606 |
| MseI | TTAA | 4 cut(s) | 528, 585, 612, 666 |
| MslI | CAYNNNNRTG | 3 cut(s) | 179, 540, 1054 |
| MspA1I | CMGCKG | 1 cut(s) | 125 |
| MspCI | CTTAAG | 1 cut(s) | 611 |
| MspI | CCGG | 6 cut(s) | 234, 323, 392, 472, 560, 1006 |
| MspR9I | CCNGG | 4 cut(s) | 284, 393, 697, 1007 |
| MvaI | CCWGG | 2 cut(s) | 284, 697 |
| MvnI | CGCG | 3 cut(s) | 136, 153, 386 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 14, 206, 402, 517, 917 |
| NarI | GGCGCC | 1 cut(s) | 366 |
| NciI | CCSGG | 2 cut(s) | 393, 1007 |
| NdeII | GATC | 5 cut(s) | 346, 378, 652, 994, 998 |
| NlaIII | CATG | 5 cut(s) | 122, 171, 178, 821, 1059 |
| NlaIV | GGNNCC | 6 cut(s) | 7, 309, 367, 603, 802, 1013 |
| NmeAIII | GCCGAG | 2 cut(s) | 246, 520 |
| PaeR7I | CTCGAG | 1 cut(s) | 500 |
| PagI | TCATGA | 1 cut(s) | 817 |
| PceI | AGGCCT | 1 cut(s) | 200 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 976 |
| PdmI | GAANNNNTTC | 1 cut(s) | 606 |
| PfeI | GAWTC | 7 cut(s) | 97, 185, 230, 237, 299, 486, 814 |
| PkrI | GCNGC | 8 cut(s) | 16, 53, 124, 127, 135, 334, 390, 955 |
| PleI | GAGTC | 1 cut(s) | 476 |
| PluTI | GGCGCC | 1 cut(s) | 369 |
| PpsI | GAGTC | 1 cut(s) | 476 |
| Psp124BI | GAGCTC | 1 cut(s) | 501 |
| Psp6I | CCWGG | 2 cut(s) | 282, 695 |
| PspGI | CCWGG | 2 cut(s) | 282, 695 |
| PspN4I | GGNNCC | 6 cut(s) | 7, 309, 367, 603, 802, 1013 |
| PspPI | GGNCC | 2 cut(s) | 800, 1012 |
| PvuII | CAGCTG | 1 cut(s) | 125 |
| RsaI | GTAC | 4 cut(s) | 257, 534, 627, 748 |
| RsaNI | GTAC | 4 cut(s) | 256, 533, 626, 747 |
| RseI | CAYNNNNRTG | 3 cut(s) | 179, 540, 1054 |
| SacI | GAGCTC | 1 cut(s) | 501 |
| SaqAI | TTAA | 4 cut(s) | 528, 585, 612, 666 |
| SatI | GCNGC | 8 cut(s) | 15, 52, 123, 126, 134, 333, 389, 954 |
| Sau3AI | GATC | 5 cut(s) | 346, 378, 652, 994, 998 |
| Sau96I | GGNCC | 2 cut(s) | 800, 1012 |
| SchI | GAGTC | 1 cut(s) | 477 |
| ScrFI | CCNGG | 4 cut(s) | 284, 393, 697, 1007 |
| SduI | GDGCHC | 2 cut(s) | 450, 501 |
| SfaNI | GCATC | 2 cut(s) | 405, 873 |
| SfcI | CTRYAG | 1 cut(s) | 942 |
| SfoI | GGCGCC | 1 cut(s) | 367 |
| Sfr274I | CTCGAG | 1 cut(s) | 500 |
| SlaI | CTCGAG | 1 cut(s) | 500 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 179, 540, 1054 |
| SmlI | CTYRAG | 3 cut(s) | 500, 611, 962 |
| SmoI | CTYRAG | 3 cut(s) | 500, 611, 962 |
| Sse9I | AATT | 9 cut(s) | 430, 505, 552, 564, 606, 763, 779, 795, 848 |
| SseBI | AGGCCT | 1 cut(s) | 200 |
| SspDI | GGCGCC | 1 cut(s) | 365 |
| SstI | GAGCTC | 1 cut(s) | 501 |
| StuI | AGGCCT | 1 cut(s) | 200 |
| StyD4I | CCNGG | 4 cut(s) | 282, 391, 695, 1005 |
| TaaI | ACNGT | 1 cut(s) | 991 |
| TaiI | ACGT | 1 cut(s) | 627 |
| TaqI | TCGA | 5 cut(s) | 82, 192, 219, 501, 997 |
| TasI | AATT | 9 cut(s) | 430, 505, 552, 564, 606, 763, 779, 795, 848 |
| TatI | WGTACW | 1 cut(s) | 532 |
| TauI | GCSGC | 5 cut(s) | 17, 54, 136, 335, 956 |
| TfiI | GAWTC | 7 cut(s) | 97, 185, 230, 237, 299, 486, 814 |
| Tru1I | TTAA | 4 cut(s) | 528, 585, 612, 666 |
| Tru9I | TTAA | 4 cut(s) | 528, 585, 612, 666 |
| TscAI | CASTG | 2 cut(s) | 33, 412 |
| TseI | GCWGC | 3 cut(s) | 122, 125, 388 |
| TspDTI | ATGAA | 3 cut(s) | 268, 478, 792 |
| TspGWI | ACGGA | 3 cut(s) | 178, 387, 649 |
| TspRI | CASTG | 2 cut(s) | 33, 412 |
| Vha464I | CTTAAG | 1 cut(s) | 611 |
| XapI | RAATTY | 4 cut(s) | 505, 564, 763, 848 |
| XhoI | CTCGAG | 1 cut(s) | 500 |
| XmnI | GAANNNNTTC | 1 cut(s) | 606 |