Diaminopimelate epimerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G53580 |
| fragaria_vesca | FvH4_6g14490 |
| malus_domestica | MD04G1119400.v1.1 MD07G1084600.v1.1 MD07G1085800.v1.1 MD12G1136700.v1.1 |
| prunus_persica | Prupe.6G249100_v2.0.a1 Prupe.6G249100_v2.0.a1 |
| pyrus_communis | pycom04g10870 pycom07g06870 pycom12g13120 |
| rosa_chinensis | RchiOBHm_Chr3g0467571 |
| rosa_laevigata | RLG00000024489 |
| rosa_multiflora | Rmu_sc0000679.1_g000030 Rmu_sc0011632.1_g000016 |
| rosa_roxburghii | Rroxscaffold_6G00413580 |
| rosa_rugosa | Rorug03G0088200 |
| rosa_samantha | Rh3AG136200 Rh3BG158100 Rh3CG157900 Rh3DG158700 |
| rosa_wichuraiana | Rw3G012930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 653, 751 |
| AccB1I | GGYRCC | 2 cut(s) | 25, 356 |
| AccII | CGCG | 2 cut(s) | 377, 970 |
| AccIII | TCCGGA | 1 cut(s) | 313 |
| AciI | CCGC | 6 cut(s) | 12, 15, 149, 152, 155, 970 |
| AclI | AACGTT | 1 cut(s) | 905 |
| AclWI | GGATC | 1 cut(s) | 1081 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 4 cut(s) | 754, 775, 797, 839 |
| AcyI | GRCGYC | 3 cut(s) | 158, 191, 357 |
| AfaI | GTAC | 4 cut(s) | 248, 525, 618, 739 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 148 |
| AgsI | TTSAA | 5 cut(s) | 106, 165, 421, 775, 848 |
| AjnI | CCWGG | 3 cut(s) | 273, 382, 686 |
| AluBI | AGCT | 3 cut(s) | 331, 490, 782 |
| AluI | AGCT | 3 cut(s) | 331, 490, 782 |
| Alw21I | GWGCWC | 1 cut(s) | 807 |
| Alw26I | GTCTC | 1 cut(s) | 87 |
| AlwI | GGATC | 1 cut(s) | 1081 |
| Aor13HI | TCCGGA | 1 cut(s) | 313 |
| AoxI | GGCC | 5 cut(s) | 3, 222, 253, 748, 1048 |
| ApeKI | GCWGC | 3 cut(s) | 179, 944, 965 |
| ApoI | RAATTY | 4 cut(s) | 754, 775, 797, 839 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 864, 896 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 843 |
| AspLEI | GCGC | 3 cut(s) | 359, 379, 970 |
| AspS9I | GGNCC | 3 cut(s) | 791, 998, 1049 |
| AsuC2I | CCSGG | 1 cut(s) | 993 |
| AsuHPI | GGTGA | 1 cut(s) | 49 |
| AvaII | GGWCC | 2 cut(s) | 791, 998 |
| AxyI | CCTNAGG | 1 cut(s) | 303 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanI | GGYRCC | 2 cut(s) | 25, 356 |
| BauI | CACGAG | 1 cut(s) | 143 |
| BbsI | GAAGAC | 1 cut(s) | 153 |
| Bbv12I | GWGCWC | 1 cut(s) | 807 |
| BbvI | GCAGC | 3 cut(s) | 191, 952, 956 |
| BccI | CCATC | 4 cut(s) | 356, 422, 560, 671 |
| BciT130I | CCWGG | 3 cut(s) | 275, 384, 688 |
| BcnI | CCSGG | 1 cut(s) | 993 |
| BcoDI | GTCTC | 1 cut(s) | 87 |
| BfmI | CTRYAG | 1 cut(s) | 933 |
| BfoI | RGCGCY | 1 cut(s) | 360 |
| BfuAI | ACCTGC | 2 cut(s) | 653, 751 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 188 |
| BisI | GCNGC | 8 cut(s) | 12, 15, 150, 153, 156, 180, 945, 966 |
| BlsI | GCNGC | 8 cut(s) | 13, 16, 151, 154, 157, 181, 946, 967 |
| Bme1390I | CCNGG | 4 cut(s) | 275, 384, 688, 993 |
| Bme18I | GGWCC | 2 cut(s) | 791, 998 |
| BmgT120I | GGNCC | 3 cut(s) | 791, 998, 1049 |
| BmiI | GGNNCC | 5 cut(s) | 27, 300, 358, 509, 594 |
| BmrFI | CCNGG | 4 cut(s) | 275, 384, 688, 993 |
| BmsI | GCATC | 2 cut(s) | 396, 617 |
| BpiI | GAAGAC | 1 cut(s) | 153 |
| BpuEI | CTTGAG | 2 cut(s) | 512, 974 |
| BpuMI | CCSGG | 1 cut(s) | 993 |
| BsaHI | GRCGYC | 3 cut(s) | 158, 191, 357 |
| BsaJI | CCNNGG | 2 cut(s) | 250, 256 |
| BsaWI | WCCGGW | 2 cut(s) | 313, 462 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 148 |
| Bse118I | RCCGGY | 2 cut(s) | 196, 1046 |
| Bse1I | ACTGG | 2 cut(s) | 535, 925 |
| Bse21I | CCTNAGG | 1 cut(s) | 303 |
| Bse3DI | GCAATG | 1 cut(s) | 1001 |
| BseAI | TCCGGA | 1 cut(s) | 313 |
| BseBI | CCWGG | 3 cut(s) | 275, 384, 688 |
| BseDI | CCNNGG | 2 cut(s) | 250, 256 |
| BseGI | GGATG | 4 cut(s) | 35, 270, 568, 676 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 148 |
| BseMI | GCAATG | 1 cut(s) | 1001 |
| BseMII | CTCAG | 1 cut(s) | 127 |
| BseNI | ACTGG | 2 cut(s) | 535, 925 |
| BseRI | GAGGAG | 1 cut(s) | 1037 |
| BseXI | GCAGC | 3 cut(s) | 191, 952, 956 |
| BseYI | CCCAGC | 1 cut(s) | 1051 |
| BsgI | GTGCAG | 1 cut(s) | 915 |
| Bsh1236I | CGCG | 2 cut(s) | 377, 970 |
| Bsh1285I | CGRYCG | 1 cut(s) | 340 |
| BshFI | GGCC | 5 cut(s) | 5, 224, 255, 750, 1050 |
| BshNI | GGYRCC | 2 cut(s) | 25, 356 |
| BsiEI | CGRYCG | 1 cut(s) | 340 |
| BsiHKAI | GWGCWC | 1 cut(s) | 807 |
| BsiSI | CCGG | 7 cut(s) | 197, 225, 314, 440, 463, 993, 1047 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 148 |
| BsmAI | GTCTC | 1 cut(s) | 87 |
| BsmBI | CGTCTC | 1 cut(s) | 87 |
| BsnI | GGCC | 5 cut(s) | 5, 224, 255, 750, 1050 |
| Bsp1286I | GDGCHC | 1 cut(s) | 807 |
| Bsp13I | TCCGGA | 1 cut(s) | 313 |
| Bsp143I | GATC | 4 cut(s) | 50, 337, 643, 1073 |
| Bsp19I | CCATGG | 1 cut(s) | 250 |
| BspACI | CCGC | 6 cut(s) | 12, 15, 149, 152, 155, 970 |
| BspANI | GGCC | 5 cut(s) | 5, 224, 255, 750, 1050 |
| BspCNI | CTCAG | 1 cut(s) | 126 |
| BspEI | TCCGGA | 1 cut(s) | 313 |
| BspFNI | CGCG | 2 cut(s) | 377, 970 |
| BspLI | GGNNCC | 5 cut(s) | 27, 300, 358, 509, 594 |
| BspMI | ACCTGC | 2 cut(s) | 653, 751 |
| BspPI | GGATC | 1 cut(s) | 1081 |
| BspT107I | GGYRCC | 2 cut(s) | 25, 356 |
| BsrDI | GCAATG | 1 cut(s) | 1001 |
| BsrFI | RCCGGY | 2 cut(s) | 196, 1046 |
| BsrI | ACTGG | 2 cut(s) | 535, 925 |
| BssAI | RCCGGY | 2 cut(s) | 196, 1046 |
| BssECI | CCNNGG | 2 cut(s) | 250, 256 |
| BssMI | GATC | 4 cut(s) | 50, 337, 643, 1073 |
| BssNI | GRCGYC | 3 cut(s) | 158, 191, 357 |
| BssSI | CACGAG | 1 cut(s) | 143 |
| BssT1I | CCWWGG | 1 cut(s) | 250 |
| Bst2BI | CACGAG | 1 cut(s) | 143 |
| Bst2UI | CCWGG | 3 cut(s) | 275, 384, 688 |
| Bst4CI | ACNGT | 3 cut(s) | 124, 523, 982 |
| BstACI | GRCGYC | 3 cut(s) | 158, 191, 357 |
| BstC8I | GCNNGC | 3 cut(s) | 198, 321, 437 |
| BstDEI | CTNAG | 2 cut(s) | 113, 303 |
| BstDSI | CCRYGG | 1 cut(s) | 250 |
| BstF5I | GGATG | 4 cut(s) | 35, 270, 568, 676 |
| BstFNI | CGCG | 2 cut(s) | 377, 970 |
| BstH2I | RGCGCY | 1 cut(s) | 360 |
| BstHHI | GCGC | 3 cut(s) | 359, 379, 970 |
| BstKTI | GATC | 4 cut(s) | 53, 340, 646, 1076 |
| BstMAI | GTCTC | 1 cut(s) | 87 |
| BstMBI | GATC | 4 cut(s) | 50, 337, 643, 1073 |
| BstMCI | CGRYCG | 1 cut(s) | 340 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 11, 155, 188, 197, 393, 908 |
| BstNI | CCWGG | 3 cut(s) | 275, 384, 688 |
| BstSCI | CCNGG | 4 cut(s) | 273, 382, 686, 991 |
| BstSFI | CTRYAG | 1 cut(s) | 933 |
| BstUI | CGCG | 2 cut(s) | 377, 970 |
| BstV1I | GCAGC | 3 cut(s) | 191, 952, 956 |
| BstV2I | GAAGAC | 1 cut(s) | 153 |
| BstX2I | RGATCY | 1 cut(s) | 1073 |
| BstYI | RGATCY | 1 cut(s) | 1073 |
| Bsu36I | CCTNAGG | 1 cut(s) | 303 |
| BsuRI | GGCC | 5 cut(s) | 5, 224, 255, 750, 1050 |
| BtgI | CCRYGG | 1 cut(s) | 250 |
| BtsCI | GGATG | 4 cut(s) | 35, 270, 568, 676 |
| BtsI | GCAGTG | 1 cut(s) | 330 |
| BtsIMutI | CAGTG | 2 cut(s) | 330, 396 |
| BveI | ACCTGC | 2 cut(s) | 653, 751 |
| Cac8I | GCNNGC | 3 cut(s) | 198, 321, 437 |
| CfoI | GCGC | 3 cut(s) | 359, 379, 970 |
| Cfr10I | RCCGGY | 2 cut(s) | 196, 1046 |
| Cfr13I | GGNCC | 3 cut(s) | 791, 998, 1049 |
| CseI | GACGC | 2 cut(s) | 147, 180 |
| Csp6I | GTAC | 4 cut(s) | 247, 524, 617, 738 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 995, 1030 |
| CviAII | CATG | 5 cut(s) | 251, 409, 503, 809, 1042 |
| CviQI | GTAC | 4 cut(s) | 247, 524, 617, 738 |
| DdeI | CTNAG | 2 cut(s) | 113, 303 |
| DinI | GGCGCC | 1 cut(s) | 358 |
| DpnI | GATC | 4 cut(s) | 52, 339, 645, 1075 |
| DpnII | GATC | 4 cut(s) | 50, 337, 643, 1073 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 250 |
| Eco47I | GGWCC | 2 cut(s) | 791, 998 |
| Eco81I | CCTNAGG | 1 cut(s) | 303 |
| EcoRII | CCWGG | 3 cut(s) | 273, 382, 686 |
| EcoT14I | CCWWGG | 1 cut(s) | 250 |
| EgeI | GGCGCC | 1 cut(s) | 358 |
| EheI | GGCGCC | 1 cut(s) | 358 |
| ErhI | CCWWGG | 1 cut(s) | 250 |
| Esp3I | CGTCTC | 1 cut(s) | 87 |
| FaeI | CATG | 5 cut(s) | 254, 412, 506, 812, 1045 |
| FatI | CATG | 5 cut(s) | 250, 408, 502, 808, 1041 |
| Fnu4HI | GCNGC | 8 cut(s) | 12, 15, 150, 153, 156, 180, 945, 966 |
| FokI | GGATG | 4 cut(s) | 22, 257, 575, 683 |
| Fsp4HI | GCNGC | 8 cut(s) | 12, 15, 150, 153, 156, 180, 945, 966 |
| GlaI | GCGC | 3 cut(s) | 358, 378, 969 |
| GluI | GCNGC | 8 cut(s) | 12, 15, 150, 153, 156, 180, 945, 966 |
| GsaI | CCCAGC | 1 cut(s) | 1055 |
| HaeII | RGCGCY | 1 cut(s) | 360 |
| HaeIII | GGCC | 5 cut(s) | 5, 224, 255, 750, 1050 |
| HapII | CCGG | 7 cut(s) | 197, 225, 314, 440, 463, 993, 1047 |
| HgaI | GACGC | 2 cut(s) | 147, 180 |
| HhaI | GCGC | 3 cut(s) | 359, 379, 970 |
| Hin1I | GRCGYC | 3 cut(s) | 158, 191, 357 |
| Hin1II | CATG | 5 cut(s) | 254, 412, 506, 812, 1045 |
| Hin6I | GCGC | 3 cut(s) | 357, 377, 968 |
| HinP1I | GCGC | 3 cut(s) | 357, 377, 968 |
| HinfI | GANTC | 9 cut(s) | 43, 171, 228, 290, 366, 459, 477, 496, 879 |
| HpaII | CCGG | 7 cut(s) | 197, 225, 314, 440, 463, 993, 1047 |
| HphI | GGTGA | 1 cut(s) | 49 |
| Hpy166II | GTNNAC | 1 cut(s) | 137 |
| Hpy188I | TCNGA | 6 cut(s) | 50, 116, 298, 342, 427, 613 |
| Hpy188III | TCNNGA | 5 cut(s) | 209, 314, 349, 551, 953 |
| Hpy8I | GTNNAC | 1 cut(s) | 137 |
| Hpy99I | CGWCG | 1 cut(s) | 196 |
| HpyAV | CCTTC | 7 cut(s) | 73, 77, 96, 242, 565, 737, 870 |
| HpyCH4III | ACNGT | 3 cut(s) | 124, 523, 982 |
| HpyCH4IV | ACGT | 2 cut(s) | 615, 905 |
| HpyCH4V | TGCA | 5 cut(s) | 473, 760, 896, 978, 1006 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 11, 155, 188, 197, 393, 908 |
| HpyF3I | CTNAG | 2 cut(s) | 113, 303 |
| HpySE526I | ACGT | 2 cut(s) | 615, 905 |
| Hsp92I | GRCGYC | 3 cut(s) | 158, 191, 357 |
| Hsp92II | CATG | 5 cut(s) | 254, 412, 506, 812, 1045 |
| HspAI | GCGC | 3 cut(s) | 357, 377, 968 |
| KasI | GGCGCC | 1 cut(s) | 356 |
| Kpn2I | TCCGGA | 1 cut(s) | 313 |
| KroI | GCCGGC | 1 cut(s) | 196 |
| KroNI | GCCGGC | 1 cut(s) | 198 |
| Kzo9I | GATC | 4 cut(s) | 50, 337, 643, 1073 |
| LmnI | GCTCC | 6 cut(s) | 298, 316, 432, 592, 886, 899 |
| Lsp1109I | GCAGC | 3 cut(s) | 191, 952, 956 |
| LweI | GCATC | 2 cut(s) | 396, 617 |
| MaeII | ACGT | 2 cut(s) | 615, 905 |
| MaeIII | GTNAC | 3 cut(s) | 307, 682, 694 |
| MalI | GATC | 4 cut(s) | 52, 339, 645, 1075 |
| MboI | GATC | 4 cut(s) | 50, 337, 643, 1073 |
| MboII | GAAGA | 3 cut(s) | 153, 285, 364 |
| MflI | RGATCY | 1 cut(s) | 1073 |
| MhlI | GDGCHC | 1 cut(s) | 807 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| Mly113I | GGCGCC | 1 cut(s) | 357 |
| MlyI | GAGTC | 5 cut(s) | 37, 180, 375, 468, 888 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroI | TCCGGA | 1 cut(s) | 313 |
| MroNI | GCCGGC | 1 cut(s) | 196 |
| MroXI | GAANNNNTTC | 1 cut(s) | 843 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 2 cut(s) | 603, 657 |
| MslI | CAYNNNNRTG | 2 cut(s) | 23, 531 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspI | CCGG | 7 cut(s) | 197, 225, 314, 440, 463, 993, 1047 |
| MspR9I | CCNGG | 4 cut(s) | 275, 384, 688, 993 |
| MvaI | CCWGG | 3 cut(s) | 275, 384, 688 |
| MvnI | CGCG | 2 cut(s) | 377, 970 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 11, 155, 188, 197, 393, 908 |
| NaeI | GCCGGC | 1 cut(s) | 198 |
| NarI | GGCGCC | 1 cut(s) | 357 |
| NciI | CCSGG | 1 cut(s) | 993 |
| NcoI | CCATGG | 1 cut(s) | 250 |
| NdeII | GATC | 4 cut(s) | 50, 337, 643, 1073 |
| NgoMIV | GCCGGC | 1 cut(s) | 196 |
| NlaIII | CATG | 5 cut(s) | 254, 412, 506, 812, 1045 |
| NlaIV | GGNNCC | 5 cut(s) | 27, 300, 358, 509, 594 |
| NmeAIII | GCCGAG | 1 cut(s) | 237 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 180 |
| PdiI | GCCGGC | 1 cut(s) | 198 |
| PdmI | GAANNNNTTC | 1 cut(s) | 843 |
| PfeI | GAWTC | 4 cut(s) | 228, 290, 477, 496 |
| PkrI | GCNGC | 8 cut(s) | 13, 16, 151, 154, 157, 181, 946, 967 |
| Ple19I | CGATCG | 1 cut(s) | 340 |
| PleI | GAGTC | 5 cut(s) | 37, 179, 374, 467, 887 |
| PluTI | GGCGCC | 1 cut(s) | 360 |
| PpsI | GAGTC | 5 cut(s) | 37, 179, 374, 467, 887 |
| Psp1406I | AACGTT | 1 cut(s) | 905 |
| Psp6I | CCWGG | 3 cut(s) | 273, 382, 686 |
| PspFI | CCCAGC | 1 cut(s) | 1051 |
| PspGI | CCWGG | 3 cut(s) | 273, 382, 686 |
| PspN4I | GGNNCC | 5 cut(s) | 27, 300, 358, 509, 594 |
| PspPI | GGNCC | 3 cut(s) | 791, 998, 1049 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 933, 965 |
| PsuI | RGATCY | 1 cut(s) | 1073 |
| PvuI | CGATCG | 1 cut(s) | 340 |
| RsaI | GTAC | 4 cut(s) | 248, 525, 618, 739 |
| RsaNI | GTAC | 4 cut(s) | 247, 524, 617, 738 |
| RseI | CAYNNNNRTG | 2 cut(s) | 23, 531 |
| SaqAI | TTAA | 2 cut(s) | 603, 657 |
| SatI | GCNGC | 8 cut(s) | 12, 15, 150, 153, 156, 180, 945, 966 |
| Sau3AI | GATC | 4 cut(s) | 50, 337, 643, 1073 |
| Sau96I | GGNCC | 3 cut(s) | 791, 998, 1049 |
| SchI | GAGTC | 5 cut(s) | 37, 180, 375, 468, 888 |
| ScrFI | CCNGG | 4 cut(s) | 275, 384, 688, 993 |
| SduI | GDGCHC | 1 cut(s) | 807 |
| SfaNI | GCATC | 2 cut(s) | 396, 617 |
| SfcI | CTRYAG | 1 cut(s) | 933 |
| SfoI | GGCGCC | 1 cut(s) | 358 |
| SinI | GGWCC | 2 cut(s) | 791, 998 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 23, 531 |
| SmlI | CTYRAG | 2 cut(s) | 491, 953 |
| SmoI | CTYRAG | 2 cut(s) | 491, 953 |
| SsiI | CCGC | 6 cut(s) | 12, 15, 149, 152, 155, 970 |
| SspDI | GGCGCC | 1 cut(s) | 356 |
| StyD4I | CCNGG | 4 cut(s) | 273, 382, 686, 991 |
| StyI | CCWWGG | 1 cut(s) | 250 |
| TaaI | ACNGT | 3 cut(s) | 124, 523, 982 |
| TaiI | ACGT | 2 cut(s) | 618, 908 |
| TaqI | TCGA | 2 cut(s) | 174, 1011 |
| TatI | WGTACW | 1 cut(s) | 523 |
| TauI | GCSGC | 5 cut(s) | 14, 17, 152, 155, 158 |
| TfiI | GAWTC | 4 cut(s) | 228, 290, 477, 496 |
| Tru1I | TTAA | 2 cut(s) | 603, 657 |
| Tru9I | TTAA | 2 cut(s) | 603, 657 |
| TscAI | CASTG | 2 cut(s) | 330, 403 |
| TseI | GCWGC | 3 cut(s) | 179, 944, 965 |
| TspDTI | ATGAA | 3 cut(s) | 259, 469, 783 |
| TspGWI | ACGGA | 1 cut(s) | 1086 |
| TspRI | CASTG | 2 cut(s) | 330, 403 |
| VpaK11BI | GGWCC | 2 cut(s) | 791, 998 |
| XapI | RAATTY | 4 cut(s) | 754, 775, 797, 839 |
| XmnI | GAANNNNTTC | 1 cut(s) | 843 |