pycom07g09650

Squamosa promoter-binding-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0015686
Physical Location & Seq
Reverse (-)
8923146 .. 8927874
4729 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1797 bp
ATGTTGGCTCCCACTCTCGCTCTCTCTAGTCCAATCACAATTTTAACTCTCTCTCTCTCTGTCTCCCCTCACTCCCTCTCCCTCATTCATATACTGATCATAGCAGGACTCTTCAATCAAATCAATTTCCAGAGCATAGCAGCTGGCTCCACCTTTACCACTATTCCCACGTGCGCTCCCACTCCCTCTCACGCTTTTTTGTATTGGCACTTAACCCCATTGGTGGAGAACAAAGGAGCCAATAGGAAAACAACCCTTCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCCCACCCTTATCCTCTTTTATACGTGATACCCAGCAGGCAGAGCTGCATCCTGCTCCTCCCCCCATTTCTGTGACAATTTTCTCTGAGCTCAACTCTTTGTACCCATTAGTTCCACCCAAAAAAATACAACCCCCATTACTCCAATCAGAACTAACACACTCACTCACACGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGGAAGAGAGAGATGGAAATAGGTGGGAACATGGACATGTTAAGCCATGATGTTAACAACTTTAGCAGTAGAGAGCAAGATGGTAGTAACAACTCACAACTTCCTAATAGTTGGGTTATATGGGATACTACAACTACTAGTCATACTACTGCTGCTCCCACTAACAATAACAACCACGTATTGTACTCCACGGCGGCTACAGCCGTCACTGTTGCCGCCATCGGGGAGGAGGCTTCTAGCTCTACTACCACTGGTGGTCACGCTCTCTTCACGGGTCATCCCTTGCATCATCAGTTCTCTAACATGTACAGTTGTTGGGCAGATCATGGCGGCGGGCCCCACTTCCACCAGGATCCACACCTGATGTGCTTGAAGCTGGGGAAGAGGCACTACTTTGAGGATCATGGAAATCATGCTCTGCCTCTGGATGAGCGGCACGTAGCGGGATTCCCAGTGGGAATGATGAGCAAGAAAGGCAAAGCAGCGGCAGCAGCAGCGCAGTTGTATGGTGCTGGGCAGCCGTTGGCGTTGAAGGTGGTGCCACGGTGTCAGGTGGAGGGGTGCCACGTGGCGCTGTTGAACGCGAAGGAGTACCACCGGAGGCACAAGGTGTGTGCGATGCACTCCAAGGCTTCCAGGGTTACCGTCTTGGGCCAAGACCAGCGTTTCTGTCAGCAGTGCAGCAGGTTCCATGTAGTGTCAGAGTTTGACGAGTCGAAAAGGAGTTGCAGGAGGAGGTTAGCAGGGCACAATGAGCGAAGGAGAAAGAGCTCGCATGATCCTCTTGCCAGAAGCTCTTCTCAAGACAATAAGTTGATGACTGGGAGGTTTCAGTACCTATCTTCTACGACAGGACGTGCTCTCTCTCTTCTGTCATCCAAGACTACGCTTGACTCTTGGGTATCTCCATCTGATCTCTCCTCAAGGTCCAGCACTGCACTTCGGGAGCTCATTGCAGAAAACCGTGCCGCCAACTTAGCTCGCCAGCTCGTGTCATCGGACAGAAACTGGGACTCATCGTCCCATAACAACAATGTAACGGAAGACTTGTTTTGTGATCATGGACAATCATGGTCTAACTCAGTTGAACCCCACCAGCACCAGATGTTTCCTGAAAATCAACACGGTTGGGACAGGTTCCATGAAAGTAGTGGGGCGCATTTAACGCTCGATCTCAGGCGGCCTCCGAGTCAAGCATACGGATTTATGTCTGAAAGGGCCAAAACAAAGGCTGAAGAAGATCAAGAGTGTGACTTGTGGAACTCCTTCCAGGGAACTAGTGTGGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SBP

Protein Analysis

599

Amino Acids

66.45

Weight (kDa)

8.27

Isoelectric Point (pI)

56.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SBP PF03110 352 - 425 1.1e-30 SBP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015686)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g10680
malus_domestica MD07G1111600.v1.1
prunus_persica Prupe.2G135000_v2.0.a1
pyrus_communis pycom07g09650
rosa_chinensis RchiOBHm_Chr1g0348611
rosa_laevigata RLG00000028636
rosa_multiflora Rmu_sc0008668.1_g000011 Rmu_sc0008668.1_g000012
rosa_roxburghii Rroxscaffold_4G00306890
rosa_rugosa Rorug01G0195700
rosa_samantha Rh1AG213500 Rh1BG179900 Rh1CG197800 Rh1CG197900 Rh1DG209900
rosa_wichuraiana Rw1G018080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1182
AccB1I GGYRCC 2 cut(s) 1045, 1068
AccBSI CCGCTC 1 cut(s) 940
AccII CGCG 1 cut(s) 1091
AciI CCGC 9 cut(s) 701, 723, 837, 840, 940, 950, 992, 1476, 1687
AclWI GGATC 4 cut(s) 854, 867, 915, 1280
AcuI CTGAAG 1 cut(s) 1761
AcvI CACGTG 2 cut(s) 171, 1075
AdeI CACNNNGTG 1 cut(s) 1117
AfaI GTAC 5 cut(s) 407, 692, 815, 1100, 1343
AfiI CCNNNNNNNGG 2 cut(s) 223, 729
AflIII ACRYGT 2 cut(s) 543, 810
AgsI TTSAA 5 cut(s) 115, 880, 1039, 1087, 1595
AhdI GACNNNNNGTC 1 cut(s) 1525
AhlI ACTAGT 2 cut(s) 644, 1784
AjiI CACGTC 1 cut(s) 1364
AjnI CCWGG 3 cut(s) 855, 1142, 1776
Alw21I GWGCWC 4 cut(s) 396, 1280, 1369, 1458
Alw26I GTCTC 1 cut(s) 67
AlwI GGATC 4 cut(s) 854, 867, 915, 1280
AlwNI CAGNNNCTG 1 cut(s) 1515
AoxI GGCC 4 cut(s) 842, 1159, 1688, 1725
ApaI GGGCCC 1 cut(s) 846
ApeKI GCWGC 9 cut(s) 140, 349, 659, 989, 995, 998, 1001, 1024, 1188
Asp700I GAANNNNTTC 2 cut(s) 1303, 1772
AspLEI GCGC 4 cut(s) 176, 1006, 1081, 1666
AspS9I GGNCC 5 cut(s) 842, 843, 1159, 1434, 1725
AsuHPI GGTGA 1 cut(s) 251
AvaII GGWCC 1 cut(s) 1434
BaeGI GKGCMC 2 cut(s) 846, 1257
BamHI GGATCC 1 cut(s) 859
BanI GGYRCC 2 cut(s) 1045, 1068
BanII GRGCYC 4 cut(s) 396, 846, 1280, 1458
BarI GAAGNNNNNNTAC 2 cut(s) 881, 913
BauI CACGAG 1 cut(s) 1496
BbrPI CACGTG 2 cut(s) 171, 1075
BbsI GAAGAC 1 cut(s) 1557
Bbv12I GWGCWC 4 cut(s) 396, 1280, 1369, 1458
BbvI GCAGC 9 cut(s) 152, 336, 646, 1001, 1007, 1010, 1013, 1036, 1200
BccI CCATC 4 cut(s) 514, 581, 734, 1423
BceAI ACGGC 3 cut(s) 695, 714, 1012
BciT130I CCWGG 3 cut(s) 857, 1144, 1778
BciVI GTATCC 1 cut(s) 625
BclI TGATCA 2 cut(s) 96, 1564
BcoDI GTCTC 1 cut(s) 67
BcuI ACTAGT 2 cut(s) 644, 1784
BfaI CTAG 4 cut(s) 27, 645, 744, 1785
BfmI CTRYAG 1 cut(s) 705
BfoI RGCGCY 1 cut(s) 1082
BfuAI ACCTGC 1 cut(s) 1182
BfuI GTATCC 1 cut(s) 625
Bme1390I CCNGG 3 cut(s) 857, 1144, 1778
Bme18I GGWCC 1 cut(s) 1434
BmeRI GACNNNNNGTC 1 cut(s) 1525
BmgBI CACGTC 1 cut(s) 1364
BmgT120I GGNCC 5 cut(s) 842, 843, 1159, 1434, 1725
BmrFI CCNGG 3 cut(s) 857, 1144, 1778
BmrI ACTGGG 3 cut(s) 953, 1338, 1525
BmsI GCATC 3 cut(s) 361, 802, 1116
BmuI ACTGGG 3 cut(s) 953, 1338, 1525
BpiI GAAGAC 1 cut(s) 1557
BplI GAGNNNNNCTC 2 cut(s) 383, 415
BpuEI CTTGAG 2 cut(s) 1293, 1414
BsaAI YACGTR 5 cut(s) 171, 329, 685, 946, 1075
BsaJI CCNNGG 5 cut(s) 696, 1049, 1134, 1143, 1777
BsaWI WCCGGW 1 cut(s) 1104
BsaXI ACNNNNNCTCC 6 cut(s) 62, 92, 160, 190, 646, 676
Bsc4I CCNNNNNNNGG 2 cut(s) 223, 729
Bse1I ACTGG 4 cut(s) 763, 959, 1333, 1520
Bse3DI GCAATG 1 cut(s) 1458
BseBI CCWGG 3 cut(s) 857, 1144, 1778
BseDI CCNNGG 5 cut(s) 696, 1049, 1134, 1143, 1777
BseGI GGATG 4 cut(s) 352, 784, 940, 1382
BseLI CCNNNNNNNGG 2 cut(s) 223, 729
BseMI GCAATG 1 cut(s) 1458
BseMII CTCAG 3 cut(s) 381, 1602, 1696
BseNI ACTGG 4 cut(s) 763, 959, 1333, 1520
BseRI GAGGAG 4 cut(s) 351, 749, 1255, 1417
BseSI GKGCMC 2 cut(s) 846, 1257
BseXI GCAGC 9 cut(s) 152, 336, 646, 1001, 1007, 1010, 1013, 1036, 1200
BseYI CCCAGC 3 cut(s) 336, 883, 1019
BsgI GTGCAG 2 cut(s) 1207, 1428
Bsh1236I CGCG 1 cut(s) 1091
BshFI GGCC 4 cut(s) 844, 1161, 1690, 1727
BshNI GGYRCC 2 cut(s) 1045, 1068
BsiHKAI GWGCWC 4 cut(s) 396, 1280, 1369, 1458
BsiSI CCGG 1 cut(s) 1105
BslFI GGGAC 3 cut(s) 1513, 1532, 1652
BslI CCNNNNNNNGG 2 cut(s) 223, 729
BsmAI GTCTC 1 cut(s) 67
BsmFI GGGAC 3 cut(s) 1513, 1532, 1652
BsnI GGCC 4 cut(s) 844, 1161, 1690, 1727
Bsp120I GGGCCC 1 cut(s) 842
Bsp1286I GDGCHC 6 cut(s) 396, 846, 1257, 1280, 1369, 1458
Bsp1407I TGTACA 1 cut(s) 813
Bsp143I GATC 9 cut(s) 96, 829, 859, 907, 1285, 1420, 1564, 1678, 1747
BspACI CCGC 9 cut(s) 701, 723, 837, 840, 940, 950, 992, 1476, 1687
BspANI GGCC 4 cut(s) 844, 1161, 1690, 1727
BspCNI CTCAG 3 cut(s) 382, 1601, 1695
BspFNI CGCG 1 cut(s) 1091
BspMI ACCTGC 1 cut(s) 1182
BspPI GGATC 4 cut(s) 854, 867, 915, 1280
BspQI GCTCTTC 1 cut(s) 1309
BspT107I GGYRCC 2 cut(s) 1045, 1068
BsrBI CCGCTC 1 cut(s) 940
BsrDI GCAATG 1 cut(s) 1458
BsrGI TGTACA 1 cut(s) 813
BsrI ACTGG 4 cut(s) 763, 959, 1333, 1520
BssECI CCNNGG 5 cut(s) 696, 1049, 1134, 1143, 1777
BssMI GATC 9 cut(s) 96, 829, 859, 907, 1285, 1420, 1564, 1678, 1747
BssSI CACGAG 1 cut(s) 1496
BssT1I CCWWGG 1 cut(s) 1134
Bst2BI CACGAG 1 cut(s) 1496
Bst2UI CCWGG 3 cut(s) 857, 1144, 1778
Bst4CI ACNGT 6 cut(s) 718, 818, 1053, 1153, 1472, 1634
Bst6I CTCTTC 6 cut(s) 116, 506, 779, 884, 1309, 1380
BstAUI TGTACA 1 cut(s) 813
BstBAI YACGTR 5 cut(s) 171, 329, 685, 946, 1075
BstC8I GCNNGC 6 cut(s) 145, 342, 842, 1280, 1489, 1493
BstDEI CTNAG 4 cut(s) 390, 1483, 1588, 1682
BstDSI CCRYGG 2 cut(s) 696, 1049
BstEII GGTNACC 1 cut(s) 1147
BstF5I GGATG 4 cut(s) 352, 784, 940, 1382
BstFNI CGCG 1 cut(s) 1091
BstH2I RGCGCY 1 cut(s) 1082
BstHHI GCGC 4 cut(s) 176, 1006, 1081, 1666
BstKTI GATC 9 cut(s) 99, 832, 862, 910, 1288, 1423, 1567, 1681, 1750
BstMAI GTCTC 1 cut(s) 67
BstMBI GATC 9 cut(s) 96, 829, 859, 907, 1285, 1420, 1564, 1678, 1747
BstMWI GCNNNNNNNGC 9 cut(s) 346, 707, 981, 995, 998, 1001, 1261, 1484, 1672
BstNI CCWGG 3 cut(s) 857, 1144, 1778
BstNSI RCATGY 2 cut(s) 547, 814
BstPI GGTNACC 1 cut(s) 1147
BstSCI CCNGG 3 cut(s) 855, 1142, 1776
BstSFI CTRYAG 1 cut(s) 705
BstSLI GKGCMC 2 cut(s) 846, 1257
BstUI CGCG 1 cut(s) 1091
BstV1I GCAGC 9 cut(s) 152, 336, 646, 1001, 1007, 1010, 1013, 1036, 1200
BstV2I GAAGAC 1 cut(s) 1557
BstX2I RGATCY 1 cut(s) 859
BstYI RGATCY 1 cut(s) 859
BsuI GTATCC 1 cut(s) 625
BsuRI GGCC 4 cut(s) 844, 1161, 1690, 1727
BtgI CCRYGG 2 cut(s) 696, 1049
BtgZI GCGATG 1 cut(s) 1139
BtrI CACGTC 1 cut(s) 1364
BtsCI GGATG 4 cut(s) 352, 784, 940, 1382
BtsI GCAGTG 2 cut(s) 1190, 1440
BtsIMutI CAGTG 5 cut(s) 714, 756, 966, 1190, 1440
BveI ACCTGC 1 cut(s) 1182
Cac8I GCNNGC 6 cut(s) 145, 342, 842, 1280, 1489, 1493
CaiI CAGNNNCTG 1 cut(s) 1515
CfoI GCGC 4 cut(s) 176, 1006, 1081, 1666
Cfr13I GGNCC 5 cut(s) 842, 843, 1159, 1434, 1725
Csp6I GTAC 5 cut(s) 406, 691, 814, 1099, 1342
CviQI GTAC 5 cut(s) 406, 691, 814, 1099, 1342
DdeI CTNAG 4 cut(s) 390, 1483, 1588, 1682
DpnI GATC 9 cut(s) 98, 831, 861, 909, 1287, 1422, 1566, 1680, 1749
DpnII GATC 9 cut(s) 96, 829, 859, 907, 1285, 1420, 1564, 1678, 1747
DraIII CACNNNGTG 1 cut(s) 1117
DriI GACNNNNNGTC 1 cut(s) 1525
Eam1104I CTCTTC 6 cut(s) 116, 506, 779, 884, 1309, 1380
Eam1105I GACNNNNNGTC 1 cut(s) 1525
EarI CTCTTC 6 cut(s) 116, 506, 779, 884, 1309, 1380
Ecl136II GAGCTC 3 cut(s) 394, 1278, 1456
Eco130I CCWWGG 1 cut(s) 1134
Eco24I GRGCYC 4 cut(s) 396, 846, 1280, 1458
Eco47I GGWCC 1 cut(s) 1434
Eco53kI GAGCTC 3 cut(s) 394, 1278, 1456
Eco57I CTGAAG 1 cut(s) 1761
Eco72I CACGTG 2 cut(s) 171, 1075
Eco91I GGTNACC 1 cut(s) 1147
EcoICRI GAGCTC 3 cut(s) 394, 1278, 1456
EcoO109I RGGNCCY 1 cut(s) 843
EcoO65I GGTNACC 1 cut(s) 1147
EcoRII CCWGG 3 cut(s) 855, 1142, 1776
EcoT14I CCWWGG 1 cut(s) 1134
EcoT38I GRGCYC 4 cut(s) 396, 846, 1280, 1458
ErhI CCWWGG 1 cut(s) 1134
FaqI GGGAC 3 cut(s) 1513, 1532, 1652
FauI CCCGC 2 cut(s) 833, 943
FbaI TGATCA 2 cut(s) 96, 1564
FokI GGATG 4 cut(s) 339, 771, 947, 1369
FriOI GRGCYC 4 cut(s) 396, 846, 1280, 1458
FspBI CTAG 4 cut(s) 27, 645, 744, 1785
GlaI GCGC 4 cut(s) 175, 1005, 1080, 1665
GsaI CCCAGC 3 cut(s) 340, 887, 1023
HaeII RGCGCY 1 cut(s) 1082
HaeIII GGCC 4 cut(s) 844, 1161, 1690, 1727
HapII CCGG 1 cut(s) 1105
HhaI GCGC 4 cut(s) 176, 1006, 1081, 1666
Hin6I GCGC 4 cut(s) 174, 1004, 1079, 1664
HinP1I GCGC 4 cut(s) 174, 1004, 1079, 1664
HincII GTYRAC 1 cut(s) 562
HindII GTYRAC 1 cut(s) 562
HinfI GANTC 6 cut(s) 108, 954, 1220, 1400, 1520, 1696
HpaI GTTAAC 1 cut(s) 562
HpaII CCGG 1 cut(s) 1105
HphI GGTGA 1 cut(s) 251
Hpy166II GTNNAC 1 cut(s) 562
Hpy188I TCNGA 7 cut(s) 391, 454, 1210, 1420, 1507, 1695, 1720
Hpy188III TCNNGA 6 cut(s) 130, 932, 1310, 1451, 1619, 1751
Hpy8I GTNNAC 1 cut(s) 562
HpyAV CCTTC 5 cut(s) 266, 1033, 1087, 1260, 1783
HpyCH4III ACNGT 6 cut(s) 718, 818, 1053, 1153, 1472, 1634
HpyCH4IV ACGT 6 cut(s) 170, 328, 684, 945, 1074, 1363
HpyCH4V TGCA 7 cut(s) 352, 793, 1129, 1188, 1236, 1445, 1463
HpyF10VI GCNNNNNNNGC 9 cut(s) 346, 707, 981, 995, 998, 1001, 1261, 1484, 1672
HpyF3I CTNAG 4 cut(s) 390, 1483, 1588, 1682
HpySE526I ACGT 6 cut(s) 170, 328, 684, 945, 1074, 1363
HspAI GCGC 4 cut(s) 174, 1004, 1079, 1664
Ksp22I TGATCA 2 cut(s) 96, 1564
KspAI GTTAAC 1 cut(s) 562
Kzo9I GATC 9 cut(s) 96, 829, 859, 907, 1285, 1420, 1564, 1678, 1747
LguI GCTCTTC 1 cut(s) 1309
LmnI GCTCC 7 cut(s) 13, 152, 181, 236, 364, 667, 1453
Lsp1109I GCAGC 9 cut(s) 152, 336, 646, 1001, 1007, 1010, 1013, 1036, 1200
LweI GCATC 3 cut(s) 361, 802, 1116
MaeI CTAG 4 cut(s) 27, 645, 744, 1785
MaeII ACGT 6 cut(s) 170, 328, 684, 945, 1074, 1363
MaeIII GTNAC 7 cut(s) 376, 593, 712, 764, 1147, 1543, 1757
MalI GATC 9 cut(s) 98, 831, 861, 909, 1287, 1422, 1566, 1680, 1749
MbiI CCGCTC 1 cut(s) 940
MboI GATC 9 cut(s) 96, 829, 859, 907, 1285, 1420, 1564, 1678, 1747
MflI RGATCY 1 cut(s) 859
MhlI GDGCHC 6 cut(s) 396, 846, 1257, 1280, 1369, 1458
MluCI AATT 3 cut(s) 39, 124, 381
MlyI GAGTC 5 cut(s) 102, 1229, 1394, 1514, 1705
MroXI GAANNNNTTC 2 cut(s) 1303, 1772
MseI TTAA 5 cut(s) 44, 212, 548, 561, 1670
MslI CAYNNNNRTG 2 cut(s) 374, 542
MspA1I CMGCKG 2 cut(s) 143, 992
MspI CCGG 1 cut(s) 1105
MspR9I CCNGG 3 cut(s) 857, 1144, 1778
MvaI CCWGG 3 cut(s) 857, 1144, 1778
MvnI CGCG 1 cut(s) 1091
MwoI GCNNNNNNNGC 9 cut(s) 346, 707, 981, 995, 998, 1001, 1261, 1484, 1672
NdeII GATC 9 cut(s) 96, 829, 859, 907, 1285, 1420, 1564, 1678, 1747
NmuCI GTSAC 4 cut(s) 376, 712, 764, 1757
NspI RCATGY 2 cut(s) 547, 814
PciI ACATGT 2 cut(s) 543, 810
PciSI GCTCTTC 1 cut(s) 1309
PdmI GAANNNNTTC 2 cut(s) 1303, 1772
PfeI GAWTC 1 cut(s) 954
PleI GAGTC 5 cut(s) 102, 1228, 1394, 1514, 1704
PmaCI CACGTG 2 cut(s) 171, 1075
PmlI CACGTG 2 cut(s) 171, 1075
PpsI GAGTC 5 cut(s) 102, 1228, 1394, 1514, 1704
Ppu21I YACGTR 5 cut(s) 171, 329, 685, 946, 1075
PscI ACATGT 2 cut(s) 543, 810
Psp124BI GAGCTC 3 cut(s) 396, 1280, 1458
Psp6I CCWGG 3 cut(s) 855, 1142, 1776
PspCI CACGTG 2 cut(s) 171, 1075
PspEI GGTNACC 1 cut(s) 1147
PspFI CCCAGC 3 cut(s) 336, 883, 1019
PspGI CCWGG 3 cut(s) 855, 1142, 1776
PspOMI GGGCCC 1 cut(s) 842
PspPI GGNCC 5 cut(s) 842, 843, 1159, 1434, 1725
PstNI CAGNNNCTG 1 cut(s) 1515
PsuI RGATCY 1 cut(s) 859
PvuII CAGCTG 1 cut(s) 143
RsaI GTAC 5 cut(s) 407, 692, 815, 1100, 1343
RsaNI GTAC 5 cut(s) 406, 691, 814, 1099, 1342
RseI CAYNNNNRTG 2 cut(s) 374, 542
SacI GAGCTC 3 cut(s) 396, 1280, 1458
SapI GCTCTTC 1 cut(s) 1309
SaqAI TTAA 5 cut(s) 44, 212, 548, 561, 1670
Sau3AI GATC 9 cut(s) 96, 829, 859, 907, 1285, 1420, 1564, 1678, 1747
Sau96I GGNCC 5 cut(s) 842, 843, 1159, 1434, 1725
SchI GAGTC 5 cut(s) 102, 1229, 1394, 1514, 1705
ScrFI CCNGG 3 cut(s) 857, 1144, 1778
SduI GDGCHC 6 cut(s) 396, 846, 1257, 1280, 1369, 1458
SfaNI GCATC 3 cut(s) 361, 802, 1116
SfcI CTRYAG 1 cut(s) 705
SinI GGWCC 1 cut(s) 1434
SmiMI CAYNNNNRTG 2 cut(s) 374, 542
SmlI CTYRAG 2 cut(s) 1308, 1429
SmoI CTYRAG 2 cut(s) 1308, 1429
SpeI ACTAGT 2 cut(s) 644, 1784
Sse9I AATT 3 cut(s) 39, 124, 381
SsiI CCGC 9 cut(s) 701, 723, 837, 840, 940, 950, 992, 1476, 1687
SspMI CTAG 4 cut(s) 27, 645, 744, 1785
SstI GAGCTC 3 cut(s) 396, 1280, 1458
StyD4I CCNGG 3 cut(s) 855, 1142, 1776
StyI CCWWGG 1 cut(s) 1134
TaaI ACNGT 6 cut(s) 718, 818, 1053, 1153, 1472, 1634
TaiI ACGT 6 cut(s) 173, 331, 687, 948, 1077, 1366
TaqI TCGA 2 cut(s) 1223, 1677
TasI AATT 3 cut(s) 39, 124, 381
TatI WGTACW 2 cut(s) 690, 813
TauI GCSGC 7 cut(s) 704, 725, 840, 943, 995, 1478, 1690
TfiI GAWTC 1 cut(s) 954
Tru1I TTAA 5 cut(s) 44, 212, 548, 561, 1670
Tru9I TTAA 5 cut(s) 44, 212, 548, 561, 1670
TscAI CASTG 5 cut(s) 721, 763, 966, 1190, 1447
TseFI GTSAC 4 cut(s) 376, 712, 764, 1757
TseI GCWGC 9 cut(s) 140, 349, 659, 989, 995, 998, 1001, 1024, 1188
Tsp45I GTSAC 4 cut(s) 376, 712, 764, 1757
TspDTI ATGAA 2 cut(s) 77, 1665
TspGWI ACGGA 2 cut(s) 1562, 1722
TspRI CASTG 5 cut(s) 721, 763, 966, 1190, 1447
VpaK11BI GGWCC 1 cut(s) 1434
XceI RCATGY 2 cut(s) 547, 814
XcmI CCANNNNNNNNNTGG 1 cut(s) 1655
XmnI GAANNNNTTC 2 cut(s) 1303, 1772
XspI CTAG 4 cut(s) 27, 645, 744, 1785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.