Rw1G018080

Squamosa promoter-binding-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0015686
Physical Location & Seq
Reverse (-)
39798048 .. 39801858
3811 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G018080.1

Sequence Viewer

Length: 1326 bp
ATGGAAATGTTTGGGCACAACATTGGTGGCAGATCAGGGCAGAATGGTAATAACGCAAATCTTGCTTGGGATATATGGGAGATGAATAATAGTAATAATAATGGCAACAACGATATATTGTACATGACGGCTGCAACAGCGGCCGTCACCATAGCGGAGCCGCCTTCCGGCTCCAGCGCGAGCTCCGAAGCGAGTTTGGGTCACCCGCTGGTGCACAACAACAACGGTGTTCAAGCAGTGCAGCAGCACTTCCAGAATTTGTACGGTGGCGATCATCATCATCAGAGTCGTCTTCGTGGGTCCCAATACCTTCCGGATCCCCACCTTATGTGCTTGAAGCTGGGGAAGAGGCACTACTTTGAGGACGCTCCTCTGCCTCTGCTTGATCATCGAGACGTGGCGGGATTTCCTTTGGCCGTAGGGGGCATGAAGAGAGGCAAGAACATGTATGGCGCTGGCAGCCGCGGAGGTGGGGCTTCTACGCAGTCGTTGAAGGTGCCGCGGTGTCAGGTGGAGGGGTGCCACGTGGCGCTGGTGAGCGCGAAGGAGTACCACCGGCGGCACAAAGTGTGTGAGATGCACTCCAAGGCTTCCAAGGTGGTGGTCTTAGGGTTGGAGCAGCGCTTCTGTCAGCAATGCAGCAGGTTTCACGTGGTGTCGGAGTTTGACGAGTCTAAGAGGAGTTGTAGGAGGAGATTAGCCGGGCATAATGAGCGAAGAAGAAAATGCTCTCATGATTCTCTACCCAGAAGCTCTTCTCAAGAGAAGAAATTGATGATGGCTGCAGCAGGGAGGTTTCCATACCTATCGTCATCCCCGACAGGATGTAGTGCTCTCTCTCTTCTGTCATCTTCCAAAAGTAGTAGTGATTCTTGGGTACTATCTCCATCTGATCTCTCCTCAAGATCCCGCGCTGCACTTCGTGAACTCATTGCAGAAAACCGTGCAGGCATCTTGGCTCGCCAGCTCATATCTTCTTCGGACCGATCAAACTCAAACTGGGAGGACTCATCACATTATAATAACCATTCGACCCAAGACTTTGGTGATTATCTTAGCCAATCATGGCCGTCTAGTTCTGTCGAATCCCATCACCATCACCATCACCATCACCATCATCAGCAGCAGCAGCAAATGTTTTCTGCCAATCAGCACAGTTGGGACAGGTTTCATGAAAGTGGTGCACATTTGACACTTGATCTAATGCAGCAGCCTCCGAGCCCGGCATATGAGACTTTCTTGCCTGCAAGGGACAGTAGTACTAAGGCTGAAGACGAGTGTGACCTGTGGAAATGGAACTCCTTCCAAGGAGCCAGTGTGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SBP

Protein Analysis

441

Amino Acids

49.07

Weight (kDa)

8.49

Isoelectric Point (pI)

66.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SBP PF03110 169 - 242 4.1e-31 SBP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015686)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g10680
malus_domestica MD07G1111600.v1.1
prunus_persica Prupe.2G135000_v2.0.a1
pyrus_communis pycom07g09650
rosa_chinensis RchiOBHm_Chr1g0348611
rosa_laevigata RLG00000028636
rosa_multiflora Rmu_sc0008668.1_g000011 Rmu_sc0008668.1_g000012
rosa_roxburghii Rroxscaffold_4G00306890
rosa_rugosa Rorug01G0195700
rosa_samantha Rh1AG213500 Rh1BG179900 Rh1CG197800 Rh1CG197900 Rh1DG209900
rosa_wichuraiana Rw1G018080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1020
Acc36I ACCTGC 1 cut(s) 633
AccB1I GGYRCC 2 cut(s) 496, 519
AccII CGCG 5 cut(s) 179, 465, 502, 542, 912
AccIII TCCGGA 1 cut(s) 313
AclWI GGATC 3 cut(s) 311, 324, 900
AcoI YGGCCR 3 cut(s) 141, 414, 1067
AcsI RAATTY 1 cut(s) 256
AcuI CTGAAG 1 cut(s) 1290
AcvI CACGTG 2 cut(s) 526, 652
AdeI CACNNNGTG 3 cut(s) 568, 655, 923
AfaI GTAC 5 cut(s) 122, 263, 551, 879, 1261
AfeI AGCGCT 1 cut(s) 623
AfiI CCNNNNNNNGG 1 cut(s) 167
AflIII ACRYGT 1 cut(s) 444
AgsI TTSAA 3 cut(s) 233, 337, 493
AjiI CACGTC 1 cut(s) 397
AluBI AGCT 4 cut(s) 183, 340, 753, 967
AluI AGCT 4 cut(s) 183, 340, 753, 967
Alw21I GWGCWC 4 cut(s) 185, 216, 835, 1186
Alw26I GTCTC 2 cut(s) 387, 1226
Alw44I GTGCAC 2 cut(s) 212, 1182
AlwI GGATC 3 cut(s) 311, 324, 900
Aor13HI TCCGGA 1 cut(s) 313
Aor51HI AGCGCT 1 cut(s) 623
AoxI GGCC 3 cut(s) 141, 414, 1067
ApaLI GTGCAC 2 cut(s) 212, 1182
ApoI RAATTY 1 cut(s) 256
Asp700I GAANNNNTTC 2 cut(s) 754, 1301
AspLEI GCGC 6 cut(s) 179, 455, 532, 542, 624, 914
AspS9I GGNCC 2 cut(s) 300, 982
AsuC2I CCSGG 2 cut(s) 703, 1223
AsuHPI GGTGA 8 cut(s) 139, 194, 547, 1058, 1085, 1091, 1097, 1103
AvaII GGWCC 2 cut(s) 300, 982
BaeGI GKGCMC 3 cut(s) 18, 216, 1186
BamHI GGATCC 1 cut(s) 316
BanI GGYRCC 2 cut(s) 496, 519
BanII GRGCYC 2 cut(s) 185, 1223
BarI GAAGNNNNNNTAC 2 cut(s) 338, 370
BbrPI CACGTG 2 cut(s) 526, 652
BbsI GAAGAC 2 cut(s) 284, 1278
Bbv12I GWGCWC 4 cut(s) 185, 216, 835, 1186
BccI CCATC 7 cut(s) 772, 895, 1098, 1104, 1110, 1116, 1122
BceAI ACGGC 4 cut(s) 128, 144, 401, 1054
BclI TGATCA 1 cut(s) 385
BcnI CCSGG 2 cut(s) 703, 1223
BcoDI GTCTC 2 cut(s) 387, 1226
BfaI CTAG 1 cut(s) 1074
BfmI CTRYAG 1 cut(s) 783
BfoI RGCGCY 3 cut(s) 456, 533, 625
BfuAI ACCTGC 1 cut(s) 633
BmcAI AGTACT 1 cut(s) 1261
Bme1390I CCNGG 2 cut(s) 703, 1223
Bme18I GGWCC 2 cut(s) 300, 982
BmgBI CACGTC 1 cut(s) 397
BmgT120I GGNCC 2 cut(s) 300, 982
BmiI GGNNCC 8 cut(s) 159, 172, 301, 302, 318, 498, 521, 1312
BmrFI CCNGG 2 cut(s) 703, 1223
BmrI ACTGGG 1 cut(s) 1009
BmsI GCATC 2 cut(s) 567, 960
BmuI ACTGGG 1 cut(s) 1009
BpiI GAAGAC 2 cut(s) 284, 1278
BplI GAGNNNNNCTC 2 cut(s) 566, 598
BpmI CTGGAG 1 cut(s) 157
BpuEI CTTGAG 2 cut(s) 744, 886
BpuMI CCSGG 2 cut(s) 703, 1223
BsaAI YACGTR 2 cut(s) 526, 652
BsaBI GATNNNNATC 1 cut(s) 276
BsaJI CCNNGG 5 cut(s) 463, 500, 585, 594, 1306
BsaWI WCCGGW 1 cut(s) 313
BsaXI ACNNNNNCTCC 1 cut(s) 1302
Bsc4I CCNNNNNNNGG 1 cut(s) 167
Bse118I RCCGGY 1 cut(s) 555
Bse1I ACTGG 2 cut(s) 1004, 1314
Bse3DI GCAATG 2 cut(s) 641, 930
Bse8I GATNNNNATC 1 cut(s) 276
BseAI TCCGGA 1 cut(s) 313
BseDI CCNNGG 5 cut(s) 463, 500, 585, 594, 1306
BseGI GGATG 2 cut(s) 812, 830
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 1 cut(s) 167
BseMI GCAATG 2 cut(s) 641, 930
BseNI ACTGG 2 cut(s) 1004, 1314
BseRI GAGGAG 4 cut(s) 360, 694, 706, 889
BseSI GKGCMC 3 cut(s) 18, 216, 1186
BseX3I CGGCCG 1 cut(s) 141
BseYI CCCAGC 1 cut(s) 340
BsgI GTGCAG 3 cut(s) 260, 900, 966
Bsh1236I CGCG 5 cut(s) 179, 465, 502, 542, 912
Bsh1285I CGRYCG 1 cut(s) 144
BshFI GGCC 3 cut(s) 143, 416, 1069
BshNI GGYRCC 2 cut(s) 496, 519
BsiEI CGRYCG 1 cut(s) 144
BsiHKAI GWGCWC 4 cut(s) 185, 216, 835, 1186
BsiSI CCGG 5 cut(s) 168, 314, 556, 702, 1223
BslFI GGGAC 3 cut(s) 286, 1175, 1265
BslI CCNNNNNNNGG 1 cut(s) 167
BsmAI GTCTC 2 cut(s) 387, 1226
BsmBI CGTCTC 1 cut(s) 387
BsmFI GGGAC 3 cut(s) 286, 1175, 1265
BsnI GGCC 3 cut(s) 143, 416, 1069
Bsp1286I GDGCHC 6 cut(s) 18, 185, 216, 835, 1186, 1223
Bsp13I TCCGGA 1 cut(s) 313
Bsp1407I TGTACA 1 cut(s) 120
Bsp143I GATC 8 cut(s) 32, 271, 316, 385, 892, 905, 986, 1198
BspANI GGCC 3 cut(s) 143, 416, 1069
BspEI TCCGGA 1 cut(s) 313
BspFNI CGCG 5 cut(s) 179, 465, 502, 542, 912
BspHI TCATGA 2 cut(s) 733, 1171
BspLI GGNNCC 8 cut(s) 159, 172, 301, 302, 318, 498, 521, 1312
BspMAI CTGCAG 1 cut(s) 787
BspMI ACCTGC 1 cut(s) 633
BspPI GGATC 3 cut(s) 311, 324, 900
BspQI GCTCTTC 1 cut(s) 760
BspT107I GGYRCC 2 cut(s) 496, 519
BsrDI GCAATG 2 cut(s) 641, 930
BsrFI RCCGGY 1 cut(s) 555
BsrGI TGTACA 1 cut(s) 120
BsrI ACTGG 2 cut(s) 1004, 1314
BssAI RCCGGY 1 cut(s) 555
BssECI CCNNGG 5 cut(s) 463, 500, 585, 594, 1306
BssMI GATC 8 cut(s) 32, 271, 316, 385, 892, 905, 986, 1198
BssT1I CCWWGG 3 cut(s) 585, 594, 1306
Bst4CI ACNGT 5 cut(s) 227, 266, 944, 1157, 1256
Bst6I CTCTTC 4 cut(s) 341, 425, 760, 846
BstAPI GCANNNNNTGC 1 cut(s) 62
BstAUI TGTACA 1 cut(s) 120
BstBAI YACGTR 2 cut(s) 526, 652
BstC8I GCNNGC 6 cut(s) 181, 457, 949, 961, 965, 1245
BstDEI CTNAG 4 cut(s) 607, 675, 1055, 1263
BstDSI CCRYGG 2 cut(s) 463, 500
BstEII GGTNACC 1 cut(s) 200
BstF5I GGATG 2 cut(s) 812, 830
BstFNI CGCG 5 cut(s) 179, 465, 502, 542, 912
BstH2I RGCGCY 3 cut(s) 456, 533, 625
BstHHI GCGC 6 cut(s) 179, 455, 532, 542, 624, 914
BstKTI GATC 8 cut(s) 35, 274, 319, 388, 895, 908, 989, 1201
BstMAI GTCTC 2 cut(s) 387, 1226
BstMBI GATC 8 cut(s) 32, 271, 316, 385, 892, 905, 986, 1198
BstMCI CGRYCG 1 cut(s) 144
BstMWI GCNNNNNNNGC 6 cut(s) 62, 137, 140, 459, 712, 1129
BstNSI RCATGY 1 cut(s) 448
BstPI GGTNACC 1 cut(s) 200
BstSCI CCNGG 2 cut(s) 701, 1221
BstSFI CTRYAG 1 cut(s) 783
BstSLI GKGCMC 3 cut(s) 18, 216, 1186
BstUI CGCG 5 cut(s) 179, 465, 502, 542, 912
BstV2I GAAGAC 2 cut(s) 284, 1278
BstX2I RGATCY 2 cut(s) 316, 905
BstXI CCANNNNNNTGG 2 cut(s) 601, 1043
BstYI RGATCY 2 cut(s) 316, 905
BstZI CGGCCG 1 cut(s) 141
BsuRI GGCC 3 cut(s) 143, 416, 1069
BtgI CCRYGG 2 cut(s) 463, 500
BtrI CACGTC 1 cut(s) 397
BtsCI GGATG 2 cut(s) 812, 830
BtsI GCAGTG 1 cut(s) 243
BtsIMutI CAGTG 2 cut(s) 243, 1321
BveI ACCTGC 1 cut(s) 633
Cac8I GCNNGC 6 cut(s) 181, 457, 949, 961, 965, 1245
CciI TCATGA 2 cut(s) 733, 1171
CfoI GCGC 6 cut(s) 179, 455, 532, 542, 624, 914
Cfr10I RCCGGY 1 cut(s) 555
Cfr13I GGNCC 2 cut(s) 300, 982
Cfr42I CCGCGG 2 cut(s) 466, 503
CpoI CGGWCCG 1 cut(s) 982
CseI GACGC 1 cut(s) 374
Csp6I GTAC 5 cut(s) 121, 262, 550, 878, 1260
CspCI CAANNNNNGTGG 2 cut(s) 7, 42
CspI CGGWCCG 1 cut(s) 982
CviAII CATG 6 cut(s) 124, 427, 445, 734, 1065, 1172
CviQI GTAC 5 cut(s) 121, 262, 550, 878, 1260
DdeI CTNAG 4 cut(s) 607, 675, 1055, 1263
DpnI GATC 8 cut(s) 34, 273, 318, 387, 894, 907, 988, 1200
DpnII GATC 8 cut(s) 32, 271, 316, 385, 892, 905, 986, 1198
DraIII CACNNNGTG 3 cut(s) 568, 655, 923
EaeI YGGCCR 3 cut(s) 141, 414, 1067
EagI CGGCCG 1 cut(s) 141
Eam1104I CTCTTC 4 cut(s) 341, 425, 760, 846
EarI CTCTTC 4 cut(s) 341, 425, 760, 846
Ecl136II GAGCTC 1 cut(s) 183
EclXI CGGCCG 1 cut(s) 141
Eco130I CCWWGG 3 cut(s) 585, 594, 1306
Eco24I GRGCYC 2 cut(s) 185, 1223
Eco47I GGWCC 2 cut(s) 300, 982
Eco47III AGCGCT 1 cut(s) 623
Eco52I CGGCCG 1 cut(s) 141
Eco53kI GAGCTC 1 cut(s) 183
Eco57I CTGAAG 1 cut(s) 1290
Eco72I CACGTG 2 cut(s) 526, 652
Eco91I GGTNACC 1 cut(s) 200
EcoICRI GAGCTC 1 cut(s) 183
EcoO109I RGGNCCY 1 cut(s) 300
EcoO65I GGTNACC 1 cut(s) 200
EcoT14I CCWWGG 3 cut(s) 585, 594, 1306
EcoT38I GRGCYC 2 cut(s) 185, 1223
ErhI CCWWGG 3 cut(s) 585, 594, 1306
Esp3I CGTCTC 1 cut(s) 387
FaeI CATG 6 cut(s) 127, 430, 448, 737, 1068, 1175
FaqI GGGAC 3 cut(s) 286, 1175, 1265
FatI CATG 6 cut(s) 123, 426, 444, 733, 1064, 1171
FauI CCCGC 3 cut(s) 213, 394, 917
FauNDI CATATG 1 cut(s) 1228
FbaI TGATCA 1 cut(s) 385
FokI GGATG 2 cut(s) 799, 837
FriOI GRGCYC 2 cut(s) 185, 1223
FspBI CTAG 1 cut(s) 1074
GlaI GCGC 6 cut(s) 178, 454, 531, 541, 623, 913
GsaI CCCAGC 1 cut(s) 344
GsuI CTGGAG 1 cut(s) 157
HaeII RGCGCY 3 cut(s) 456, 533, 625
HaeIII GGCC 3 cut(s) 143, 416, 1069
HapII CCGG 5 cut(s) 168, 314, 556, 702, 1223
HgaI GACGC 1 cut(s) 374
HhaI GCGC 6 cut(s) 179, 455, 532, 542, 624, 914
Hin1II CATG 6 cut(s) 127, 430, 448, 737, 1068, 1175
Hin6I GCGC 6 cut(s) 177, 453, 530, 540, 622, 912
HinP1I GCGC 6 cut(s) 177, 453, 530, 540, 622, 912
HinfI GANTC 6 cut(s) 286, 671, 737, 869, 1007, 1085
HpaII CCGG 5 cut(s) 168, 314, 556, 702, 1223
HphI GGTGA 8 cut(s) 139, 194, 547, 1058, 1085, 1091, 1097, 1103
Hpy166II GTNNAC 3 cut(s) 214, 926, 1184
Hpy188I TCNGA 6 cut(s) 187, 285, 661, 892, 982, 1218
Hpy188III TCNNGA 8 cut(s) 253, 314, 392, 734, 761, 903, 923, 1172
Hpy8I GTNNAC 3 cut(s) 214, 926, 1184
HpyAV CCTTC 5 cut(s) 174, 320, 487, 538, 1312
HpyCH4III ACNGT 5 cut(s) 227, 266, 944, 1157, 1256
HpyCH4IV ACGT 3 cut(s) 396, 525, 651
HpyF10VI GCNNNNNNNGC 6 cut(s) 62, 137, 140, 459, 712, 1129
HpyF3I CTNAG 4 cut(s) 607, 675, 1055, 1263
HpySE526I ACGT 3 cut(s) 396, 525, 651
Hsp92II CATG 6 cut(s) 127, 430, 448, 737, 1068, 1175
HspAI GCGC 6 cut(s) 177, 453, 530, 540, 622, 912
KflI GGGWCCC 1 cut(s) 300
Kpn2I TCCGGA 1 cut(s) 313
Ksp22I TGATCA 1 cut(s) 385
KspI CCGCGG 2 cut(s) 466, 503
Kzo9I GATC 8 cut(s) 32, 271, 316, 385, 892, 905, 986, 1198
LguI GCTCTTC 1 cut(s) 760
LmnI GCTCC 6 cut(s) 157, 176, 188, 373, 616, 1310
LweI GCATC 2 cut(s) 567, 960
MaeI CTAG 1 cut(s) 1074
MaeII ACGT 3 cut(s) 396, 525, 651
MaeIII GTNAC 3 cut(s) 145, 200, 1280
MalI GATC 8 cut(s) 34, 273, 318, 387, 894, 907, 988, 1200
MboI GATC 8 cut(s) 32, 271, 316, 385, 892, 905, 986, 1198
MflI RGATCY 2 cut(s) 316, 905
MhlI GDGCHC 6 cut(s) 18, 185, 216, 835, 1186, 1223
MluCI AATT 2 cut(s) 256, 770
MlyI GAGTC 3 cut(s) 295, 680, 1001
MmeI TCCRAC 2 cut(s) 594, 639
MroI TCCGGA 1 cut(s) 313
MroXI GAANNNNTTC 2 cut(s) 754, 1301
MseI TTAA 1 cut(s) 1324
MslI CAYNNNNRTG 1 cut(s) 1176
MspA1I CMGCKG 4 cut(s) 140, 208, 465, 502
MspI CCGG 5 cut(s) 168, 314, 556, 702, 1223
MspR9I CCNGG 2 cut(s) 703, 1223
MvnI CGCG 5 cut(s) 179, 465, 502, 542, 912
MwoI GCNNNNNNNGC 6 cut(s) 62, 137, 140, 459, 712, 1129
NciI CCSGG 2 cut(s) 703, 1223
NdeI CATATG 1 cut(s) 1228
NdeII GATC 8 cut(s) 32, 271, 316, 385, 892, 905, 986, 1198
NlaIII CATG 6 cut(s) 127, 430, 448, 737, 1068, 1175
NlaIV GGNNCC 8 cut(s) 159, 172, 301, 302, 318, 498, 521, 1312
NmuCI GTSAC 3 cut(s) 145, 200, 1280
NspI RCATGY 1 cut(s) 448
PagI TCATGA 2 cut(s) 733, 1171
PciI ACATGT 1 cut(s) 444
PciSI GCTCTTC 1 cut(s) 760
PcsI WCGNNNNNNNCGW 1 cut(s) 815
PdmI GAANNNNTTC 2 cut(s) 754, 1301
PfeI GAWTC 3 cut(s) 737, 869, 1085
PleI GAGTC 3 cut(s) 294, 679, 1001
PmaCI CACGTG 2 cut(s) 526, 652
PmlI CACGTG 2 cut(s) 526, 652
PpsI GAGTC 3 cut(s) 294, 679, 1001
Ppu21I YACGTR 2 cut(s) 526, 652
PpuMI RGGWCCY 1 cut(s) 300
PscI ACATGT 1 cut(s) 444
PsiI TTATAA 1 cut(s) 1020
Psp124BI GAGCTC 1 cut(s) 185
Psp5II RGGWCCY 1 cut(s) 300
PspCI CACGTG 2 cut(s) 526, 652
PspEI GGTNACC 1 cut(s) 200
PspFI CCCAGC 1 cut(s) 340
PspN4I GGNNCC 8 cut(s) 159, 172, 301, 302, 318, 498, 521, 1312
PspPI GGNCC 2 cut(s) 300, 982
PspPPI RGGWCCY 1 cut(s) 300
PstI CTGCAG 1 cut(s) 787
PsuI RGATCY 2 cut(s) 316, 905
RsaI GTAC 5 cut(s) 122, 263, 551, 879, 1261
RsaNI GTAC 5 cut(s) 121, 262, 550, 878, 1260
RseI CAYNNNNRTG 1 cut(s) 1176
Rsr2I CGGWCCG 1 cut(s) 982
RsrII CGGWCCG 1 cut(s) 982
SacI GAGCTC 1 cut(s) 185
SacII CCGCGG 2 cut(s) 466, 503
SapI GCTCTTC 1 cut(s) 760
SaqAI TTAA 1 cut(s) 1324
Sau3AI GATC 8 cut(s) 32, 271, 316, 385, 892, 905, 986, 1198
Sau96I GGNCC 2 cut(s) 300, 982
ScaI AGTACT 1 cut(s) 1261
SchI GAGTC 3 cut(s) 295, 680, 1001
ScrFI CCNGG 2 cut(s) 703, 1223
SduI GDGCHC 6 cut(s) 18, 185, 216, 835, 1186, 1223
SfaNI GCATC 2 cut(s) 567, 960
SfcI CTRYAG 1 cut(s) 783
Sfr303I CCGCGG 2 cut(s) 466, 503
SgrAI CRCCGGYG 1 cut(s) 555
SgrBI CCGCGG 2 cut(s) 466, 503
SinI GGWCC 2 cut(s) 300, 982
SmiMI CAYNNNNRTG 1 cut(s) 1176
SmlI CTYRAG 2 cut(s) 759, 901
SmoI CTYRAG 2 cut(s) 759, 901
Sse9I AATT 2 cut(s) 256, 770
SspMI CTAG 1 cut(s) 1074
SstI GAGCTC 1 cut(s) 185
StyD4I CCNGG 2 cut(s) 701, 1221
StyI CCWWGG 3 cut(s) 585, 594, 1306
TaaI ACNGT 5 cut(s) 227, 266, 944, 1157, 1256
TaiI ACGT 3 cut(s) 399, 528, 654
TaqI TCGA 3 cut(s) 391, 1031, 1083
TaqII GACCGA 1 cut(s) 999
TasI AATT 2 cut(s) 256, 770
TatI WGTACW 2 cut(s) 120, 1259
TauI GCSGC 5 cut(s) 143, 163, 465, 502, 562
TfiI GAWTC 3 cut(s) 737, 869, 1085
Tru1I TTAA 1 cut(s) 1324
Tru9I TTAA 1 cut(s) 1324
TscAI CASTG 2 cut(s) 243, 1321
TseFI GTSAC 3 cut(s) 145, 200, 1280
Tsp45I GTSAC 3 cut(s) 145, 200, 1280
TspDTI ATGAA 4 cut(s) 98, 443, 1160, 1188
TspRI CASTG 2 cut(s) 243, 1321
VneI GTGCAC 2 cut(s) 212, 1182
VpaK11BI GGWCC 2 cut(s) 300, 982
XapI RAATTY 1 cut(s) 256
XceI RCATGY 1 cut(s) 448
XmnI GAANNNNTTC 2 cut(s) 754, 1301
XspI CTAG 1 cut(s) 1074
ZrmI AGTACT 1 cut(s) 1261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.