RchiOBHm_Chr1g0348611

Squamosa promoter-binding-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0015686
Physical Location & Seq
Reverse (-)
41520560 .. 41525752
5193 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57462

Sequence Viewer

Length: 1320 bp
ATGGAAATGTTTGGGCACAACATTGGTGGCAGATCAGGGCAGAATGGTAATAACGCAAATCTTGCTTGGGATATATGGGAGATGAATAATAGTAATAATAATGGCAACAACGATATATTGTACATGACGGCTGCAACAGCGGCCGTCACCATAGCGGAGCCGCCTTCAGGCTCCAGCGCGAGCTCCGAAGCGAGTTTGGGTCACCCGCTGGTGCACAACAACAACGGTGTTCAAGCAGTGCAGCAGCACTTCCAGAATTTGTACGGTGGCGATCATCATCATCATCAGAGTCGTCTTCGTGGGTCCCAATATCTTCCGGATCCCCACCTTATGTGCTTGAAGCTGGGGAAGAGGCACTACTTTGAGGACGCTCCTCTGCCTCTGCTTGATCATCGAGACGTGGCGGGATTTCCTTTGGCCGTAGGGGGCATGAAGAGAGGCAAGAACGTGTATGGCCCTGGCAGCCGCGGAGGTGGGGCTTCTACGCAGTCGTTGAAGGTGCCGCGGTGTCAGGTGGAGGGGTGCCACGTGGCGCTGGTGAGCGCGAAGGAGTACCACCGGCGGCACAAAGTGTGTGAGATGCACTCCAAGGCTTCCAAGGTGGTGGTCTTAGGGTTGGAGCAGCGCTTCTGTCAGCAATGCAGCAGGTTTCACGTGGTGTCGGAGTTTGACGAGTCTAAGAGGAGTTGTAGGAGGAGATTAGCTGGGCATAATGAGCGAAGAAGAAAATGCTCTCATGATTCTCTACCCAGAAGCTCTTCTCAAGAGAAGAAATTGATGATGGCTGCAGCAGGGAGATTTCCATACCTATCGTCATCCCCGACAGGATGTAGTGCTCTCTCTCTTCTGTCATCTTCCAAAAGTAGTAGTGATTCTTGGGTACTATCTCCATCTGATCTCTCCTCAAGATCCCGCGCTGCACTTCGTGAACTCATTGCAGAAAACCGTGCAGGCATCTTGGCTCGCCAGCTCATATCTTCTTCGGACCGATCAAACTCAAACTGGGAGGACTCATCACATTATAATAACCATTCGACCCAAGACTTTGGTGATTATCTTAGCCAATCATGGCCGTCTGGTTCTGTCGAATCCCATCACCATCATCATCATCATCAGCAGCAGCAGCAAATGTTTTCTGCCAATCAGCACAGTTGGGACAGGTTTCATGAAAGTGGTGCACATTTGACACTTGATCTAATGCAGCAGCCTCCGAGCCCGGCATATGAGACTTTCTTGCCTGCAAGGGACAGTAGTACTAAGGCTGAAGACGAGTGTGACCTGTGGAAATGGAACTCCTTCCAAGGAGCCAGTGTGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SBP

Protein Analysis

439

Amino Acids

48.76

Weight (kDa)

8.49

Isoelectric Point (pI)

65.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SBP PF03110 170 - 243 4.1e-31 SBP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015686)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g10680
malus_domestica MD07G1111600.v1.1
prunus_persica Prupe.2G135000_v2.0.a1
pyrus_communis pycom07g09650
rosa_chinensis RchiOBHm_Chr1g0348611
rosa_laevigata RLG00000028636
rosa_multiflora Rmu_sc0008668.1_g000011 Rmu_sc0008668.1_g000012
rosa_roxburghii Rroxscaffold_4G00306890
rosa_rugosa Rorug01G0195700
rosa_samantha Rh1AG213500 Rh1BG179900 Rh1CG197800 Rh1CG197900 Rh1DG209900
rosa_wichuraiana Rw1G018080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1023
Acc36I ACCTGC 1 cut(s) 636
AccB1I GGYRCC 2 cut(s) 499, 522
AccII CGCG 5 cut(s) 179, 468, 505, 545, 915
AccIII TCCGGA 1 cut(s) 316
AclWI GGATC 3 cut(s) 314, 327, 903
AcoI YGGCCR 3 cut(s) 141, 417, 1070
AcsI RAATTY 1 cut(s) 256
AcuI CTGAAG 2 cut(s) 150, 1284
AcvI CACGTG 2 cut(s) 529, 655
AdeI CACNNNGTG 3 cut(s) 571, 658, 926
AfaI GTAC 5 cut(s) 122, 263, 554, 882, 1255
AfeI AGCGCT 1 cut(s) 626
AfiI CCNNNNNNNGG 1 cut(s) 167
AflIII ACRYGT 1 cut(s) 447
AgsI TTSAA 3 cut(s) 233, 340, 496
AjiI CACGTC 1 cut(s) 400
AjnI CCWGG 1 cut(s) 457
AluBI AGCT 5 cut(s) 183, 343, 704, 756, 970
AluI AGCT 5 cut(s) 183, 343, 704, 756, 970
Alw21I GWGCWC 4 cut(s) 185, 216, 838, 1180
Alw26I GTCTC 2 cut(s) 390, 1220
Alw44I GTGCAC 2 cut(s) 212, 1176
AlwI GGATC 3 cut(s) 314, 327, 903
Aor13HI TCCGGA 1 cut(s) 316
Aor51HI AGCGCT 1 cut(s) 626
AoxI GGCC 4 cut(s) 141, 417, 454, 1070
ApaLI GTGCAC 2 cut(s) 212, 1176
ApoI RAATTY 1 cut(s) 256
Asp700I GAANNNNTTC 2 cut(s) 757, 1295
AspLEI GCGC 5 cut(s) 179, 535, 545, 627, 917
AspS9I GGNCC 3 cut(s) 303, 455, 985
AsuC2I CCSGG 1 cut(s) 1217
AsuHPI GGTGA 5 cut(s) 139, 194, 550, 1061, 1088
AvaII GGWCC 2 cut(s) 303, 985
BaeGI GKGCMC 3 cut(s) 18, 216, 1180
BamHI GGATCC 1 cut(s) 319
BanI GGYRCC 2 cut(s) 499, 522
BanII GRGCYC 2 cut(s) 185, 1217
BarI GAAGNNNNNNTAC 2 cut(s) 341, 373
BbrPI CACGTG 2 cut(s) 529, 655
BbsI GAAGAC 2 cut(s) 287, 1272
Bbv12I GWGCWC 4 cut(s) 185, 216, 838, 1180
BccI CCATC 4 cut(s) 775, 898, 1101, 1107
BceAI ACGGC 4 cut(s) 128, 144, 404, 1057
BciT130I CCWGG 1 cut(s) 459
BclI TGATCA 1 cut(s) 388
BcnI CCSGG 1 cut(s) 1217
BcoDI GTCTC 2 cut(s) 390, 1220
BfmI CTRYAG 1 cut(s) 786
BfoI RGCGCY 2 cut(s) 536, 628
BfuAI ACCTGC 1 cut(s) 636
BmcAI AGTACT 1 cut(s) 1255
Bme1390I CCNGG 2 cut(s) 459, 1217
Bme18I GGWCC 2 cut(s) 303, 985
BmgBI CACGTC 1 cut(s) 400
BmgT120I GGNCC 3 cut(s) 303, 455, 985
BmiI GGNNCC 8 cut(s) 159, 172, 304, 305, 321, 501, 524, 1306
BmrFI CCNGG 2 cut(s) 459, 1217
BmrI ACTGGG 1 cut(s) 1012
BmsI GCATC 2 cut(s) 570, 963
BmuI ACTGGG 1 cut(s) 1012
BpiI GAAGAC 2 cut(s) 287, 1272
BplI GAGNNNNNCTC 2 cut(s) 569, 601
BpmI CTGGAG 1 cut(s) 157
BpuEI CTTGAG 2 cut(s) 747, 889
BpuMI CCSGG 1 cut(s) 1217
BsaAI YACGTR 2 cut(s) 529, 655
BsaBI GATNNNNATC 1 cut(s) 276
BsaJI CCNNGG 6 cut(s) 457, 466, 503, 588, 597, 1300
BsaWI WCCGGW 1 cut(s) 316
BsaXI ACNNNNNCTCC 1 cut(s) 1296
Bsc4I CCNNNNNNNGG 1 cut(s) 167
Bse118I RCCGGY 1 cut(s) 558
Bse1I ACTGG 2 cut(s) 1007, 1308
Bse3DI GCAATG 2 cut(s) 644, 933
Bse8I GATNNNNATC 1 cut(s) 276
BseAI TCCGGA 1 cut(s) 316
BseBI CCWGG 1 cut(s) 459
BseDI CCNNGG 6 cut(s) 457, 466, 503, 588, 597, 1300
BseGI GGATG 2 cut(s) 815, 833
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 1 cut(s) 167
BseMI GCAATG 2 cut(s) 644, 933
BseNI ACTGG 2 cut(s) 1007, 1308
BseRI GAGGAG 4 cut(s) 363, 697, 709, 892
BseSI GKGCMC 3 cut(s) 18, 216, 1180
BseX3I CGGCCG 1 cut(s) 141
BseYI CCCAGC 2 cut(s) 343, 704
BsgI GTGCAG 3 cut(s) 260, 903, 969
Bsh1236I CGCG 5 cut(s) 179, 468, 505, 545, 915
Bsh1285I CGRYCG 1 cut(s) 144
BshFI GGCC 4 cut(s) 143, 419, 456, 1072
BshNI GGYRCC 2 cut(s) 499, 522
BsiEI CGRYCG 1 cut(s) 144
BsiHKAI GWGCWC 4 cut(s) 185, 216, 838, 1180
BsiSI CCGG 3 cut(s) 317, 559, 1217
BslFI GGGAC 3 cut(s) 289, 1169, 1259
BslI CCNNNNNNNGG 1 cut(s) 167
BsmAI GTCTC 2 cut(s) 390, 1220
BsmBI CGTCTC 1 cut(s) 390
BsmFI GGGAC 3 cut(s) 289, 1169, 1259
BsnI GGCC 4 cut(s) 143, 419, 456, 1072
Bsp1286I GDGCHC 6 cut(s) 18, 185, 216, 838, 1180, 1217
Bsp13I TCCGGA 1 cut(s) 316
Bsp1407I TGTACA 1 cut(s) 120
Bsp143I GATC 8 cut(s) 32, 271, 319, 388, 895, 908, 989, 1192
BspANI GGCC 4 cut(s) 143, 419, 456, 1072
BspEI TCCGGA 1 cut(s) 316
BspFNI CGCG 5 cut(s) 179, 468, 505, 545, 915
BspHI TCATGA 2 cut(s) 736, 1165
BspLI GGNNCC 8 cut(s) 159, 172, 304, 305, 321, 501, 524, 1306
BspMAI CTGCAG 1 cut(s) 790
BspMI ACCTGC 1 cut(s) 636
BspPI GGATC 3 cut(s) 314, 327, 903
BspQI GCTCTTC 1 cut(s) 763
BspT107I GGYRCC 2 cut(s) 499, 522
BsrDI GCAATG 2 cut(s) 644, 933
BsrFI RCCGGY 1 cut(s) 558
BsrGI TGTACA 1 cut(s) 120
BsrI ACTGG 2 cut(s) 1007, 1308
BssAI RCCGGY 1 cut(s) 558
BssECI CCNNGG 6 cut(s) 457, 466, 503, 588, 597, 1300
BssMI GATC 8 cut(s) 32, 271, 319, 388, 895, 908, 989, 1192
BssT1I CCWWGG 3 cut(s) 588, 597, 1300
Bst2UI CCWGG 1 cut(s) 459
Bst4CI ACNGT 5 cut(s) 227, 266, 947, 1151, 1250
Bst6I CTCTTC 4 cut(s) 344, 428, 763, 849
BstAPI GCANNNNNTGC 1 cut(s) 62
BstAUI TGTACA 1 cut(s) 120
BstBAI YACGTR 2 cut(s) 529, 655
BstC8I GCNNGC 5 cut(s) 181, 952, 964, 968, 1239
BstDEI CTNAG 4 cut(s) 610, 678, 1058, 1257
BstDSI CCRYGG 2 cut(s) 466, 503
BstEII GGTNACC 1 cut(s) 200
BstF5I GGATG 2 cut(s) 815, 833
BstFNI CGCG 5 cut(s) 179, 468, 505, 545, 915
BstH2I RGCGCY 2 cut(s) 536, 628
BstHHI GCGC 5 cut(s) 179, 535, 545, 627, 917
BstKTI GATC 8 cut(s) 35, 274, 322, 391, 898, 911, 992, 1195
BstMAI GTCTC 2 cut(s) 390, 1220
BstMBI GATC 8 cut(s) 32, 271, 319, 388, 895, 908, 989, 1192
BstMCI CGRYCG 1 cut(s) 144
BstMWI GCNNNNNNNGC 6 cut(s) 62, 137, 140, 462, 715, 1123
BstNI CCWGG 1 cut(s) 459
BstPI GGTNACC 1 cut(s) 200
BstSCI CCNGG 2 cut(s) 457, 1215
BstSFI CTRYAG 1 cut(s) 786
BstSLI GKGCMC 3 cut(s) 18, 216, 1180
BstUI CGCG 5 cut(s) 179, 468, 505, 545, 915
BstV2I GAAGAC 2 cut(s) 287, 1272
BstX2I RGATCY 2 cut(s) 319, 908
BstXI CCANNNNNNTGG 2 cut(s) 604, 1046
BstYI RGATCY 2 cut(s) 319, 908
BstZI CGGCCG 1 cut(s) 141
BsuRI GGCC 4 cut(s) 143, 419, 456, 1072
BtgI CCRYGG 2 cut(s) 466, 503
BtrI CACGTC 1 cut(s) 400
BtsCI GGATG 2 cut(s) 815, 833
BtsI GCAGTG 1 cut(s) 243
BtsIMutI CAGTG 2 cut(s) 243, 1315
BveI ACCTGC 1 cut(s) 636
Cac8I GCNNGC 5 cut(s) 181, 952, 964, 968, 1239
CciI TCATGA 2 cut(s) 736, 1165
CfoI GCGC 5 cut(s) 179, 535, 545, 627, 917
Cfr10I RCCGGY 1 cut(s) 558
Cfr13I GGNCC 3 cut(s) 303, 455, 985
Cfr42I CCGCGG 2 cut(s) 469, 506
CpoI CGGWCCG 1 cut(s) 985
CseI GACGC 1 cut(s) 377
Csp6I GTAC 5 cut(s) 121, 262, 553, 881, 1254
CspCI CAANNNNNGTGG 2 cut(s) 7, 42
CspI CGGWCCG 1 cut(s) 985
CviAII CATG 5 cut(s) 124, 430, 737, 1068, 1166
CviQI GTAC 5 cut(s) 121, 262, 553, 881, 1254
DdeI CTNAG 4 cut(s) 610, 678, 1058, 1257
DpnI GATC 8 cut(s) 34, 273, 321, 390, 897, 910, 991, 1194
DpnII GATC 8 cut(s) 32, 271, 319, 388, 895, 908, 989, 1192
DraIII CACNNNGTG 3 cut(s) 571, 658, 926
EaeI YGGCCR 3 cut(s) 141, 417, 1070
EagI CGGCCG 1 cut(s) 141
Eam1104I CTCTTC 4 cut(s) 344, 428, 763, 849
EarI CTCTTC 4 cut(s) 344, 428, 763, 849
Ecl136II GAGCTC 1 cut(s) 183
EclXI CGGCCG 1 cut(s) 141
Eco130I CCWWGG 3 cut(s) 588, 597, 1300
Eco24I GRGCYC 2 cut(s) 185, 1217
Eco47I GGWCC 2 cut(s) 303, 985
Eco47III AGCGCT 1 cut(s) 626
Eco52I CGGCCG 1 cut(s) 141
Eco53kI GAGCTC 1 cut(s) 183
Eco57I CTGAAG 2 cut(s) 150, 1284
Eco72I CACGTG 2 cut(s) 529, 655
Eco91I GGTNACC 1 cut(s) 200
EcoICRI GAGCTC 1 cut(s) 183
EcoO109I RGGNCCY 1 cut(s) 303
EcoO65I GGTNACC 1 cut(s) 200
EcoRII CCWGG 1 cut(s) 457
EcoT14I CCWWGG 3 cut(s) 588, 597, 1300
EcoT38I GRGCYC 2 cut(s) 185, 1217
ErhI CCWWGG 3 cut(s) 588, 597, 1300
Esp3I CGTCTC 1 cut(s) 390
FaeI CATG 5 cut(s) 127, 433, 740, 1071, 1169
FaqI GGGAC 3 cut(s) 289, 1169, 1259
FatI CATG 5 cut(s) 123, 429, 736, 1067, 1165
FauI CCCGC 3 cut(s) 213, 397, 920
FauNDI CATATG 1 cut(s) 1222
FbaI TGATCA 1 cut(s) 388
FokI GGATG 2 cut(s) 802, 840
FriOI GRGCYC 2 cut(s) 185, 1217
GlaI GCGC 5 cut(s) 178, 534, 544, 626, 916
GsaI CCCAGC 2 cut(s) 347, 708
GsuI CTGGAG 1 cut(s) 157
HaeII RGCGCY 2 cut(s) 536, 628
HaeIII GGCC 4 cut(s) 143, 419, 456, 1072
HapII CCGG 3 cut(s) 317, 559, 1217
HgaI GACGC 1 cut(s) 377
HhaI GCGC 5 cut(s) 179, 535, 545, 627, 917
Hin1II CATG 5 cut(s) 127, 433, 740, 1071, 1169
Hin6I GCGC 5 cut(s) 177, 533, 543, 625, 915
HinP1I GCGC 5 cut(s) 177, 533, 543, 625, 915
HinfI GANTC 6 cut(s) 289, 674, 740, 872, 1010, 1088
HpaII CCGG 3 cut(s) 317, 559, 1217
HphI GGTGA 5 cut(s) 139, 194, 550, 1061, 1088
Hpy166II GTNNAC 3 cut(s) 214, 929, 1178
Hpy188I TCNGA 6 cut(s) 187, 288, 664, 895, 985, 1212
Hpy188III TCNNGA 8 cut(s) 253, 317, 395, 737, 764, 906, 926, 1166
Hpy8I GTNNAC 3 cut(s) 214, 929, 1178
HpyAV CCTTC 4 cut(s) 174, 490, 541, 1306
HpyCH4III ACNGT 5 cut(s) 227, 266, 947, 1151, 1250
HpyCH4IV ACGT 4 cut(s) 399, 447, 528, 654
HpyF10VI GCNNNNNNNGC 6 cut(s) 62, 137, 140, 462, 715, 1123
HpyF3I CTNAG 4 cut(s) 610, 678, 1058, 1257
HpySE526I ACGT 4 cut(s) 399, 447, 528, 654
Hsp92II CATG 5 cut(s) 127, 433, 740, 1071, 1169
HspAI GCGC 5 cut(s) 177, 533, 543, 625, 915
KflI GGGWCCC 1 cut(s) 303
Kpn2I TCCGGA 1 cut(s) 316
Ksp22I TGATCA 1 cut(s) 388
KspI CCGCGG 2 cut(s) 469, 506
Kzo9I GATC 8 cut(s) 32, 271, 319, 388, 895, 908, 989, 1192
LguI GCTCTTC 1 cut(s) 763
LmnI GCTCC 6 cut(s) 157, 176, 188, 376, 619, 1304
LweI GCATC 2 cut(s) 570, 963
MaeII ACGT 4 cut(s) 399, 447, 528, 654
MaeIII GTNAC 3 cut(s) 145, 200, 1274
MalI GATC 8 cut(s) 34, 273, 321, 390, 897, 910, 991, 1194
MboI GATC 8 cut(s) 32, 271, 319, 388, 895, 908, 989, 1192
MflI RGATCY 2 cut(s) 319, 908
MhlI GDGCHC 6 cut(s) 18, 185, 216, 838, 1180, 1217
MluCI AATT 2 cut(s) 256, 773
MlyI GAGTC 3 cut(s) 298, 683, 1004
MmeI TCCRAC 2 cut(s) 597, 642
MroI TCCGGA 1 cut(s) 316
MroXI GAANNNNTTC 2 cut(s) 757, 1295
MseI TTAA 1 cut(s) 1318
MslI CAYNNNNRTG 1 cut(s) 1170
MspA1I CMGCKG 4 cut(s) 140, 208, 468, 505
MspI CCGG 3 cut(s) 317, 559, 1217
MspR9I CCNGG 2 cut(s) 459, 1217
MvaI CCWGG 1 cut(s) 459
MvnI CGCG 5 cut(s) 179, 468, 505, 545, 915
MwoI GCNNNNNNNGC 6 cut(s) 62, 137, 140, 462, 715, 1123
NciI CCSGG 1 cut(s) 1217
NdeI CATATG 1 cut(s) 1222
NdeII GATC 8 cut(s) 32, 271, 319, 388, 895, 908, 989, 1192
NlaIII CATG 5 cut(s) 127, 433, 740, 1071, 1169
NlaIV GGNNCC 8 cut(s) 159, 172, 304, 305, 321, 501, 524, 1306
NmuCI GTSAC 3 cut(s) 145, 200, 1274
PagI TCATGA 2 cut(s) 736, 1165
PciSI GCTCTTC 1 cut(s) 763
PcsI WCGNNNNNNNCGW 1 cut(s) 818
PdmI GAANNNNTTC 2 cut(s) 757, 1295
PfeI GAWTC 3 cut(s) 740, 872, 1088
PleI GAGTC 3 cut(s) 297, 682, 1004
PmaCI CACGTG 2 cut(s) 529, 655
PmlI CACGTG 2 cut(s) 529, 655
PpsI GAGTC 3 cut(s) 297, 682, 1004
Ppu21I YACGTR 2 cut(s) 529, 655
PpuMI RGGWCCY 1 cut(s) 303
PsiI TTATAA 1 cut(s) 1023
Psp124BI GAGCTC 1 cut(s) 185
Psp5II RGGWCCY 1 cut(s) 303
Psp6I CCWGG 1 cut(s) 457
PspCI CACGTG 2 cut(s) 529, 655
PspEI GGTNACC 1 cut(s) 200
PspFI CCCAGC 2 cut(s) 343, 704
PspGI CCWGG 1 cut(s) 457
PspN4I GGNNCC 8 cut(s) 159, 172, 304, 305, 321, 501, 524, 1306
PspPI GGNCC 3 cut(s) 303, 455, 985
PspPPI RGGWCCY 1 cut(s) 303
PstI CTGCAG 1 cut(s) 790
PsuI RGATCY 2 cut(s) 319, 908
RsaI GTAC 5 cut(s) 122, 263, 554, 882, 1255
RsaNI GTAC 5 cut(s) 121, 262, 553, 881, 1254
RseI CAYNNNNRTG 1 cut(s) 1170
Rsr2I CGGWCCG 1 cut(s) 985
RsrII CGGWCCG 1 cut(s) 985
SacI GAGCTC 1 cut(s) 185
SacII CCGCGG 2 cut(s) 469, 506
SapI GCTCTTC 1 cut(s) 763
SaqAI TTAA 1 cut(s) 1318
Sau3AI GATC 8 cut(s) 32, 271, 319, 388, 895, 908, 989, 1192
Sau96I GGNCC 3 cut(s) 303, 455, 985
ScaI AGTACT 1 cut(s) 1255
SchI GAGTC 3 cut(s) 298, 683, 1004
ScrFI CCNGG 2 cut(s) 459, 1217
SduI GDGCHC 6 cut(s) 18, 185, 216, 838, 1180, 1217
SfaNI GCATC 2 cut(s) 570, 963
SfcI CTRYAG 1 cut(s) 786
Sfr303I CCGCGG 2 cut(s) 469, 506
SgrAI CRCCGGYG 1 cut(s) 558
SgrBI CCGCGG 2 cut(s) 469, 506
SinI GGWCC 2 cut(s) 303, 985
SmiMI CAYNNNNRTG 1 cut(s) 1170
SmlI CTYRAG 2 cut(s) 762, 904
SmoI CTYRAG 2 cut(s) 762, 904
Sse9I AATT 2 cut(s) 256, 773
SstI GAGCTC 1 cut(s) 185
StyD4I CCNGG 2 cut(s) 457, 1215
StyI CCWWGG 3 cut(s) 588, 597, 1300
TaaI ACNGT 5 cut(s) 227, 266, 947, 1151, 1250
TaiI ACGT 4 cut(s) 402, 450, 531, 657
TaqI TCGA 3 cut(s) 394, 1034, 1086
TaqII GACCGA 1 cut(s) 1002
TasI AATT 2 cut(s) 256, 773
TatI WGTACW 2 cut(s) 120, 1253
TauI GCSGC 5 cut(s) 143, 163, 468, 505, 565
TfiI GAWTC 3 cut(s) 740, 872, 1088
Tru1I TTAA 1 cut(s) 1318
Tru9I TTAA 1 cut(s) 1318
TscAI CASTG 2 cut(s) 243, 1315
TseFI GTSAC 3 cut(s) 145, 200, 1274
Tsp45I GTSAC 3 cut(s) 145, 200, 1274
TspDTI ATGAA 4 cut(s) 98, 446, 1154, 1182
TspRI CASTG 2 cut(s) 243, 1315
VneI GTGCAC 2 cut(s) 212, 1176
VpaK11BI GGWCC 2 cut(s) 303, 985
XapI RAATTY 1 cut(s) 256
XmnI GAANNNNTTC 2 cut(s) 757, 1295
ZrmI AGTACT 1 cut(s) 1255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.