pycom07g27270

copper transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
27058009 .. 27058585
577 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 219 bp
ATGATTATGCTGGCGATCATGTTGCTTAACGGCGGAGTATTCGTGGCCATCGTTTTGGGGCTGGCGATTGGTTACTTGGCGTTTCGGAGTGGGGACGATGACGTGGCGGGTGTGGTGGTAGAGACTGATAATCCGTGTGCGTGGTGGAACCTAGGTTGGATGGATCTGGGTTGGGGGAAGACGGTTAAAAAAAGATCGATCAGGGAAGAAAAAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

73

Amino Acids

7.97

Weight (kDa)

6.1

Isoelectric Point (pI)

36.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013368)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 33, 107
AclWI GGATC 1 cut(s) 171
AcoI YGGCCR 1 cut(s) 45
AjiI CACGTC 1 cut(s) 103
Alw26I GTCTC 1 cut(s) 116
AlwI GGATC 1 cut(s) 171
AoxI GGCC 1 cut(s) 45
AspA2I CCTAGG 1 cut(s) 151
AvrII CCTAGG 1 cut(s) 151
BalI TGGCCA 1 cut(s) 47
BbsI GAAGAC 1 cut(s) 185
BccI CCATC 2 cut(s) 56, 154
BceAI ACGGC 1 cut(s) 46
BcgI CGANNNNNNTGC 2 cut(s) 4, 38
BcoDI GTCTC 1 cut(s) 116
BfaI CTAG 1 cut(s) 152
BlnI CCTAGG 1 cut(s) 151
BmgBI CACGTC 1 cut(s) 103
BmiI GGNNCC 1 cut(s) 149
BpiI GAAGAC 1 cut(s) 185
Bsa29I ATCGAT 1 cut(s) 197
BsaJI CCNNGG 1 cut(s) 151
BsaXI ACNNNNNCTCC 2 cut(s) 27, 57
BseCI ATCGAT 1 cut(s) 197
BseDI CCNNGG 1 cut(s) 151
BseGI GGATG 1 cut(s) 165
BshFI GGCC 1 cut(s) 47
BshVI ATCGAT 1 cut(s) 197
BslFI GGGAC 1 cut(s) 107
BsmAI GTCTC 1 cut(s) 116
BsmFI GGGAC 1 cut(s) 107
BsnI GGCC 1 cut(s) 47
Bsp143I GATC 4 cut(s) 15, 163, 194, 198
BspACI CCGC 2 cut(s) 33, 107
BspANI GGCC 1 cut(s) 47
BspDI ATCGAT 1 cut(s) 197
BspLI GGNNCC 1 cut(s) 149
BspPI GGATC 1 cut(s) 171
BssECI CCNNGG 1 cut(s) 151
BssMI GATC 4 cut(s) 15, 163, 194, 198
BssT1I CCWWGG 1 cut(s) 151
Bst4CI ACNGT 1 cut(s) 184
BstC8I GCNNGC 2 cut(s) 12, 63
BstF5I GGATG 1 cut(s) 165
BstKTI GATC 4 cut(s) 18, 166, 197, 201
BstMAI GTCTC 1 cut(s) 116
BstMBI GATC 4 cut(s) 15, 163, 194, 198
BstV2I GAAGAC 1 cut(s) 185
BstX2I RGATCY 1 cut(s) 163
BstXI CCANNNNNNTGG 1 cut(s) 55
BstYI RGATCY 1 cut(s) 163
Bsu15I ATCGAT 1 cut(s) 197
BsuRI GGCC 1 cut(s) 47
BsuTUI ATCGAT 1 cut(s) 197
BtrI CACGTC 1 cut(s) 103
BtsCI GGATG 1 cut(s) 165
Cac8I GCNNGC 2 cut(s) 12, 63
ClaI ATCGAT 1 cut(s) 197
CviAII CATG 1 cut(s) 19
CviJI RGCY 2 cut(s) 47, 61
CviKI_1 RGCY 2 cut(s) 47, 61
DpnI GATC 4 cut(s) 17, 165, 196, 200
DpnII GATC 4 cut(s) 15, 163, 194, 198
EaeI YGGCCR 1 cut(s) 45
EciI GGCGGA 1 cut(s) 48
Eco130I CCWWGG 1 cut(s) 151
EcoT14I CCWWGG 1 cut(s) 151
ErhI CCWWGG 1 cut(s) 151
FaeI CATG 1 cut(s) 22
FaiI YATR 2 cut(s) 8, 20
FaqI GGGAC 1 cut(s) 107
FatI CATG 1 cut(s) 18
FauI CCCGC 1 cut(s) 100
FokI GGATG 1 cut(s) 172
FspBI CTAG 1 cut(s) 152
HaeIII GGCC 1 cut(s) 47
Hin1II CATG 1 cut(s) 22
Hpy188I TCNGA 1 cut(s) 87
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4IV ACGT 1 cut(s) 102
HpySE526I ACGT 1 cut(s) 102
Hsp92II CATG 1 cut(s) 22
Kzo9I GATC 4 cut(s) 15, 163, 194, 198
LpnPI CCDG 3 cut(s) 47, 152, 187
MaeI CTAG 1 cut(s) 152
MaeII ACGT 1 cut(s) 102
MaeIII GTNAC 1 cut(s) 71
MalI GATC 4 cut(s) 17, 165, 196, 200
MboI GATC 4 cut(s) 15, 163, 194, 198
MboII GAAGA 2 cut(s) 190, 218
MflI RGATCY 1 cut(s) 163
MlsI TGGCCA 1 cut(s) 47
MluNI TGGCCA 1 cut(s) 47
MmeI TCCRAC 1 cut(s) 137
Mox20I TGGCCA 1 cut(s) 47
MscI TGGCCA 1 cut(s) 47
MseI TTAA 2 cut(s) 27, 186
Msp20I TGGCCA 1 cut(s) 47
NdeII GATC 4 cut(s) 15, 163, 194, 198
NlaIII CATG 1 cut(s) 22
NlaIV GGNNCC 1 cut(s) 149
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PspN4I GGNNCC 1 cut(s) 149
PsuI RGATCY 1 cut(s) 163
SaqAI TTAA 2 cut(s) 27, 186
Sau3AI GATC 4 cut(s) 15, 163, 194, 198
SetI ASST 4 cut(s) 105, 153, 157, 218
SsiI CCGC 2 cut(s) 33, 107
SspMI CTAG 1 cut(s) 152
StyI CCWWGG 1 cut(s) 151
TaaI ACNGT 1 cut(s) 184
TaiI ACGT 1 cut(s) 105
TaqI TCGA 1 cut(s) 197
Tru1I TTAA 2 cut(s) 27, 186
Tru9I TTAA 2 cut(s) 27, 186
TspGWI ACGGA 1 cut(s) 123
XmaJI CCTAGG 1 cut(s) 151
XspI CTAG 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.