Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0006352

Physical Location & Seq

Genomic Coordinates Reverse (-)

27700180 .. 27705612

Gene Structure 5433 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g28380.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGGAAGATCGAACTGTTTACTCCTACATTCAGAGTCGTTACTATCGATCTCCTGAAGTTCTCCTTGGTTATCAATATACTACTTCTATTGATATGTGGTCCTTTGGATGTATAGTCGCCGAATTGTTTCTGGGGTTGCCATTGTTCCCAGGAGCTTCAGAATTTGACCTCCTAAGGCGAATGATTGAAATACTTGGAGGGCAACCCCCAGATTATGTACTTAAGGAGGCAAAAAACACAAGCAAGTTCTTTAAGTGCATTCGGAGTGTGCACAATGTGGAGAACGGGGAACATTCTGCAAATAGAAAAAGTGCTTATCAAGCATTAACCGAAGCAGAATATGAAGCTAGAGAATTGAAAAGGCCATCAACTGGGAAAGAGTATTTTAATCATATGAACCTTGAAGAAATTGTTACAAACTATCCGTATAGGAAGAACTTGCCTAAGGAAGACATGGTTAAAGAAACTCAAATACGACTAGCTTTGGTTGATTTTTTGAGGGGACTCGTAGAGTTTGATCCTGCAAAACGCTGGTCACCCTTTCAGGCTTCAAAACACCCTTTTGTTACGGGGGAACCTTTTACACACCCTTATAAACCTCCCTCGGAGACCCCTCACATGCCTGTTTCTCAAAACATAAGGGTGGACCATCATCCTGGTGGTGGACATTGGTTTGCTGCTGGTTTATCCCCGAATATTCCAGGTAGAAATAGGGTCTCCATTCATAGCAGCCCACATTTTCAGGTGGTTCCATATGCACATGCTAATAGCTATGGCAGTGTAGGAAGCCATGGTAGCTATAATGATGGTACCGGACTAGGAAGCAGCTATGGAAGTTACGGAGATACTAGTAATATGTTTGCTTATTATTCACCAGTTGGCCCTTCTGGGATGAACATGCTCGCACAAGGTAATGTATCAATGCTTGGAAGTAGTCCGGATGCAAGACGGAGAATTGTTCAGTATTCACATGGAAATGGACTTGGTATGAGTCCTTCAGCAGGAAGCTTTGCTCCACTACCTCTAGGCACTAGTCCTTCACAATTTACTCCGCCAAACTCCTACAGTCAAGTTTCTGCTGGCTCTCCAGGACATTATGGTCCAACTTCTCCAGCAAGGGGCAATTGTCATGGATCACCTTTAGGAAAGATGGCCGCAGTTAGCCAGTTTAATAGACGAAAAAGTTGGGGATATCCTGGAGGTTCTCAAACTCAAGAAAGTTCATCAACACATTGGCAAGGGCAAGCTACTGATGGCACCAGTTCTAGCCAAGCTGAGGGGAACTCTCAAATACTAGGTAGTTCACCATCACATTTGCATTTAAGCTCAAATGCTGGAAGCTGGAAGCAACAGAGAGGAAGCAGTGGTATTTCTGCTGGTTACTTAGCCCAGAACATGCCAGCTTCCATCGCAGTTGGCTCCCCTATGAAATTCTCAATGACCACAGGAGTGGCTCATGAAAAGGCTGAGGCTAACCCGTCGTTGCCTGATCCTGGGGATTGGGATCCCAACTATAGTGATGAACTTCTTCTGCAAGAAGATGGTTCGGATGTAAGTTGCCTTACTGCTGAGTTCAGCCAAGGCATGCATCTTAGTTCTGCAGAAACATTGGTTGGGTCCGGAAGATTTAACCGTGTGCCAAATTCAAGCTCAGGTCCATCCTTTCAAAGACAAAATGGACCCATTCAATCTTATCCACATGTAGAGGTGGGTAGCCCTCCTTCAACTACTGAACCATTTGCTGGATGCGCGCGTTTGTCAAAACCTTCTCATTTCATGCCTCATATATCACAAAATTCTCCAAGCCGCTTGGGACAGCAATATCAGCGGTCAAATCACGGACGACCCACCAATTCTCGTGGTAATGATTGGAATCACATGAAGATGCAGCCCCCTTCTCCCAATTTTAACTCTGGAGGCCCACATTCTCCGGGAAATAGCTCATTCAGCAATGGCATGTCATGGGGGCATAGAGCCAGTCATCCCGTCACTAGCATTCCACCTGCATCACGAGGAAGAAAGGACTATGGGAGGATTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009267 GO:0009605 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0009991 GO:0010033 GO:0010468 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0019932 GO:0019933 GO:0019935 GO:0023052 GO:0030587 GO:0031152 GO:0031667 GO:0031668 GO:0031669 GO:0032502 GO:0033554 GO:0035556 GO:0036211 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042594 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044764 GO:0045472 GO:0046677 GO:0048518 GO:0048519 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051409 GO:0051703 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0071496 GO:0071704 GO:0090702 GO:0097327 GO:0098630 GO:0098743 GO:0099120 GO:0140096 GO:1901564 GO:1901654 GO:1901700 GO:1904643

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

681

Amino Acids

73.87

Weight (kDa)

8.81

Isoelectric Point (pI)

56.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35980 AT5G35980 AT5G35980
fragaria_vesca	FvH4_7g34270 FvH4_7g34270 FvH4_7g34270 FvH4_7g34270
malus_domestica	MD01G1239700.v1.1 MD07G1311600.v1.1
prunus_persica	Prupe.2G329600_v2.0.a1 Prupe.2G329600_v2.0.a1
pyrus_communis	pycom07g28380
rosa_chinensis	RchiOBHm_Chr1g0384621
rosa_laevigata	RLG00000026026
rosa_multiflora	Rmu_co8382885.1_g000001 Rmu_sc0012136.1_g000028
rosa_roxburghii	Rroxscaffold_1G00045450
rosa_rugosa	Rorug01G0450200
rosa_samantha	Rh1AG474700 Rh1BG432800 Rh1CG446000 Rh1DG465400 Rh2AG390000 Rh3CG154800 Rh3DG155900 Rh4CG245100
rosa_wichuraiana	Rw1G039790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	594
AarI	CACCTGC	1 cut(s)	2011
AasI	GACNNNNNNGTC	1 cut(s)	1098
Acc36I	ACCTGC	1 cut(s)	2011
Acc65I	GGTACC	1 cut(s)	809
AccB1I	GGYRCC	2 cut(s)	809, 1256
AccB7I	CCANNNNNTGG	2 cut(s)	371, 1742
AccII	CGCG	2 cut(s)	1751, 1753
AccIII	TCCGGA	2 cut(s)	937, 1619
AciI	CCGC	4 cut(s)	1052, 1155, 1807, 1828
AclWI	GGATC	5 cut(s)	512, 1141, 1484, 1499, 1512
AcoI	YGGCCR	1 cut(s)	1152
AcsI	RAATTY	4 cut(s)	161, 1430, 1642, 1795
AcuI	CTGAAG	3 cut(s)	75, 141, 981
AdeI	CACNNNGTG	1 cut(s)	277
AfaI	GTAC	2 cut(s)	219, 811
AfiI	CCNNNNNNNGG	7 cut(s)	371, 662, 1001, 1118, 1276, 1493, 1742
AflII	CTTAAG	1 cut(s)	221
AflIII	ACRYGT	1 cut(s)	1699
AgsI	TTSAA	8 cut(s)	188, 358, 404, 552, 1647, 1667, 1688, 1725
AhlI	ACTAGT	2 cut(s)	848, 1031
AjnI	CCWGG	6 cut(s)	148, 655, 700, 1087, 1195, 1492
AjuI	GAANNNNNNNTTGG	4 cut(s)	48, 80, 1596, 1628
AleI	CACNNNNGTG	1 cut(s)	1448
Alw21I	GWGCWC	1 cut(s)	273
Alw26I	GTCTC	2 cut(s)	602, 721
Alw44I	GTGCAC	1 cut(s)	269
AlwI	GGATC	5 cut(s)	512, 1141, 1484, 1499, 1512
Aor13HI	TCCGGA	2 cut(s)	937, 1619
AoxI	GGCC	4 cut(s)	362, 880, 1152, 1918
ApaLI	GTGCAC	1 cut(s)	269
ApeKI	GCWGC	4 cut(s)	677, 729, 825, 1888
ApoI	RAATTY	4 cut(s)	161, 1430, 1642, 1795
ArsI	GACNNNNNNTTYG	2 cut(s)	518, 550
Asp700I	GAANNNNTTC	2 cut(s)	126, 1527
Asp718I	GGTACC	1 cut(s)	809
AspLEI	GCGC	2 cut(s)	1751, 1753
AspS9I	GGNCC	8 cut(s)	99, 646, 881, 1100, 1617, 1655, 1679, 1919
AsuC2I	CCSGG	1 cut(s)	1932
AsuHPI	GGTGA	4 cut(s)	528, 864, 1128, 1296
AvaII	GGWCC	6 cut(s)	99, 646, 1100, 1617, 1655, 1679
AxyI	CCTNAGG	2 cut(s)	173, 444
BaeGI	GKGCMC	1 cut(s)	273
BamHI	GGATCC	1 cut(s)	1504
BanI	GGYRCC	2 cut(s)	809, 1256
BarI	GAAGNNNNNNTAC	4 cut(s)	979, 1011, 1705, 1737
BauI	CACGAG	2 cut(s)	1857, 2010
BbsI	GAAGAC	1 cut(s)	456
Bbv12I	GWGCWC	1 cut(s)	273
BbvCI	CCTCAGC	2 cut(s)	1275, 1467
BbvI	GCAGC	4 cut(s)	664, 741, 837, 1900
BccI	CCATC	9 cut(s)	373, 657, 800, 1144, 1247, 1315, 1415, 1535, 1666
BciT130I	CCWGG	6 cut(s)	150, 657, 702, 1089, 1197, 1494
BcnI	CCSGG	1 cut(s)	1932
BcoDI	GTCTC	2 cut(s)	602, 721
BcuI	ACTAGT	2 cut(s)	848, 1031
BfaI	CTAG	9 cut(s)	348, 479, 818, 849, 1025, 1032, 1266, 1295, 1992
BfmI	CTRYAG	3 cut(s)	1063, 1513, 1599
BfrI	CTTAAG	1 cut(s)	221
BfuAI	ACCTGC	1 cut(s)	2011
BisI	GCNGC	6 cut(s)	678, 730, 826, 1155, 1807, 1889
BlsI	GCNGC	6 cut(s)	679, 731, 827, 1156, 1808, 1890
Bme1390I	CCNGG	7 cut(s)	150, 657, 702, 1089, 1197, 1494, 1932
Bme18I	GGWCC	6 cut(s)	99, 646, 1100, 1617, 1655, 1679
BmgT120I	GGNCC	8 cut(s)	99, 646, 881, 1100, 1617, 1655, 1679, 1919
BmiI	GGNNCC	8 cut(s)	576, 750, 811, 1258, 1420, 1506, 1618, 1681
BmrFI	CCNGG	7 cut(s)	150, 657, 702, 1089, 1197, 1494, 1932
BmrI	ACTGGG	1 cut(s)	381
BmsI	GCATC	5 cut(s)	931, 1597, 1736, 1875, 2015
BmuI	ACTGGG	1 cut(s)	381
BpiI	GAAGAC	1 cut(s)	456
BplI	GAGNNNNNCTC	2 cut(s)	1268, 1300
BpmI	CTGGAG	4 cut(s)	1071, 1095, 1218, 1935
Bpu10I	CCTNAGC	3 cut(s)	1275, 1467, 1651
BpuEI	CTTGAG	1 cut(s)	1197
BpuMI	CCSGG	1 cut(s)	1932
Bsa29I	ATCGAT	1 cut(s)	46
BsaBI	GATNNNNATC	2 cut(s)	1503, 1872
BsaI	GGTCTC	2 cut(s)	602, 721
BsaJI	CCNNGG	6 cut(s)	64, 148, 603, 790, 1493, 1579
BsaWI	WCCGGW	3 cut(s)	812, 937, 1619
Bsc4I	CCNNNNNNNGG	7 cut(s)	371, 662, 1001, 1118, 1276, 1493, 1742
Bse1I	ACTGG	5 cut(s)	376, 875, 1165, 1260, 1977
Bse21I	CCTNAGG	2 cut(s)	173, 444
Bse3DI	GCAATG	1 cut(s)	1957
Bse8I	GATNNNNATC	2 cut(s)	1503, 1872
BseAI	TCCGGA	2 cut(s)	937, 1619
BseBI	CCWGG	6 cut(s)	150, 657, 702, 1089, 1197, 1494
BseCI	ATCGAT	1 cut(s)	46
BseDI	CCNNGG	6 cut(s)	64, 148, 603, 790, 1493, 1579
BseGI	GGATG	8 cut(s)	113, 652, 897, 946, 1555, 1658, 1751, 1981
BseJI	GATNNNNATC	2 cut(s)	1503, 1872
BseLI	CCNNNNNNNGG	7 cut(s)	371, 662, 1001, 1118, 1276, 1493, 1742
BseMI	GCAATG	1 cut(s)	1957
BseMII	CTCAG	4 cut(s)	1266, 1458, 1560, 1665
BseNI	ACTGG	5 cut(s)	376, 875, 1165, 1260, 1977
BsePI	GCGCGC	1 cut(s)	1749
BseSI	GKGCMC	1 cut(s)	273
BseXI	GCAGC	4 cut(s)	664, 741, 837, 1900
Bsh1236I	CGCG	2 cut(s)	1751, 1753
BshFI	GGCC	4 cut(s)	364, 882, 1154, 1920
BshNI	GGYRCC	2 cut(s)	809, 1256
BshVI	ATCGAT	1 cut(s)	46
BsiHKAI	GWGCWC	1 cut(s)	273
BsiSI	CCGG	4 cut(s)	813, 938, 1620, 1931
BslFI	GGGAC	2 cut(s)	516, 1827
BslI	CCNNNNNNNGG	7 cut(s)	371, 662, 1001, 1118, 1276, 1493, 1742
BsmAI	GTCTC	2 cut(s)	602, 721
BsmFI	GGGAC	2 cut(s)	516, 1827
BsmI	GAATGC	2 cut(s)	258, 1995
BsnI	GGCC	4 cut(s)	364, 882, 1154, 1920
Bso31I	GGTCTC	2 cut(s)	602, 721
Bsp1286I	GDGCHC	1 cut(s)	273
Bsp13I	TCCGGA	2 cut(s)	937, 1619
Bsp143I	GATC	6 cut(s)	7, 47, 517, 1133, 1489, 1504
Bsp19I	CCATGG	1 cut(s)	790
BspACI	CCGC	4 cut(s)	1052, 1155, 1807, 1828
BspANI	GGCC	4 cut(s)	364, 882, 1154, 1920
BspCNI	CTCAG	4 cut(s)	1267, 1459, 1561, 1664
BspDI	ATCGAT	1 cut(s)	46
BspEI	TCCGGA	2 cut(s)	937, 1619
BspFNI	CGCG	2 cut(s)	1751, 1753
BspHI	TCATGA	1 cut(s)	1456
BspLI	GGNNCC	8 cut(s)	576, 750, 811, 1258, 1420, 1506, 1618, 1681
BspMAI	CTGCAG	1 cut(s)	1603
BspMI	ACCTGC	1 cut(s)	2011
BspPI	GGATC	5 cut(s)	512, 1141, 1484, 1499, 1512
BspT107I	GGYRCC	2 cut(s)	809, 1256
BspTI	CTTAAG	1 cut(s)	221
BspTNI	GGTCTC	2 cut(s)	602, 721
BsrDI	GCAATG	1 cut(s)	1957
BsrI	ACTGG	5 cut(s)	376, 875, 1165, 1260, 1977
BssECI	CCNNGG	6 cut(s)	64, 148, 603, 790, 1493, 1579
BssHII	GCGCGC	1 cut(s)	1749
BssMI	GATC	6 cut(s)	7, 47, 517, 1133, 1489, 1504
BssSI	CACGAG	2 cut(s)	1857, 2010
BssT1I	CCWWGG	3 cut(s)	64, 790, 1579
Bst2BI	CACGAG	2 cut(s)	1857, 2010
Bst2UI	CCWGG	6 cut(s)	150, 657, 702, 1089, 1197, 1494
Bst4CI	ACNGT	3 cut(s)	16, 1067, 1634
BstAFI	CTTAAG	1 cut(s)	221
BstC8I	GCNNGC	6 cut(s)	903, 1081, 1245, 1401, 1586, 1751
BstDEI	CTNAG	8 cut(s)	173, 444, 1275, 1384, 1467, 1569, 1592, 1651
BstDSI	CCRYGG	1 cut(s)	790
BstEII	GGTNACC	1 cut(s)	534
BstENI	CCTNNNNNAGG	1 cut(s)	999
BstF5I	GGATG	8 cut(s)	113, 652, 897, 946, 1555, 1658, 1751, 1981
BstFNI	CGCG	2 cut(s)	1751, 1753
BstHHI	GCGC	2 cut(s)	1751, 1753
BstKTI	GATC	6 cut(s)	10, 50, 520, 1136, 1492, 1507
BstMAI	GTCTC	2 cut(s)	602, 721
BstMBI	GATC	6 cut(s)	7, 47, 517, 1133, 1489, 1504
BstMWI	GCNNNNNNNGC	6 cut(s)	320, 795, 1409, 1748, 1825, 1947
BstNI	CCWGG	6 cut(s)	150, 657, 702, 1089, 1197, 1494
BstNSI	RCATGY	7 cut(s)	622, 764, 901, 1399, 1588, 1703, 1960
BstPI	GGTNACC	1 cut(s)	534
BstSCI	CCNGG	7 cut(s)	148, 655, 700, 1087, 1195, 1492, 1930
BstSFI	CTRYAG	3 cut(s)	1063, 1513, 1599
BstSLI	GKGCMC	1 cut(s)	273
BstUI	CGCG	2 cut(s)	1751, 1753
BstV1I	GCAGC	4 cut(s)	664, 741, 837, 1900
BstV2I	GAAGAC	1 cut(s)	456
BstX2I	RGATCY	1 cut(s)	1504
BstXI	CCANNNNNNTGG	2 cut(s)	656, 1450
BstYI	RGATCY	1 cut(s)	1504
Bsu15I	ATCGAT	1 cut(s)	46
Bsu36I	CCTNAGG	2 cut(s)	173, 444
BsuRI	GGCC	4 cut(s)	364, 882, 1154, 1920
BsuTUI	ATCGAT	1 cut(s)	46
BtgI	CCRYGG	1 cut(s)	790
BtgZI	GCGATG	1 cut(s)	1393
BtsCI	GGATG	8 cut(s)	113, 652, 897, 946, 1555, 1658, 1751, 1981
BtsI	GCAGTG	2 cut(s)	784, 1369
BtsIMutI	CAGTG	2 cut(s)	784, 1369
BveI	ACCTGC	1 cut(s)	2011
Cac8I	GCNNGC	6 cut(s)	903, 1081, 1245, 1401, 1586, 1751
CciI	TCATGA	1 cut(s)	1456
CfoI	GCGC	2 cut(s)	1751, 1753
Cfr13I	GGNCC	8 cut(s)	99, 646, 881, 1100, 1617, 1655, 1679, 1919
ClaI	ATCGAT	1 cut(s)	46
Csp6I	GTAC	2 cut(s)	218, 810
CspCI	CAANNNNNGTGG	2 cut(s)	1840, 1875
CviQI	GTAC	2 cut(s)	218, 810
DdeI	CTNAG	8 cut(s)	173, 444, 1275, 1384, 1467, 1569, 1592, 1651
DpnI	GATC	6 cut(s)	9, 49, 519, 1135, 1491, 1506
DpnII	GATC	6 cut(s)	7, 47, 517, 1133, 1489, 1504
DraIII	CACNNNGTG	1 cut(s)	277
DrdI	GACNNNNNNGTC	1 cut(s)	1098
DseDI	GACNNNNNNGTC	1 cut(s)	1098
EaeI	YGGCCR	1 cut(s)	1152
EciI	GGCGGA	1 cut(s)	1041
Eco130I	CCWWGG	3 cut(s)	64, 790, 1579
Eco31I	GGTCTC	2 cut(s)	602, 721
Eco32I	GATATC	1 cut(s)	1193
Eco47I	GGWCC	6 cut(s)	99, 646, 1100, 1617, 1655, 1679
Eco57I	CTGAAG	3 cut(s)	75, 141, 981
Eco81I	CCTNAGG	2 cut(s)	173, 444
Eco91I	GGTNACC	1 cut(s)	534
EcoNI	CCTNNNNNAGG	1 cut(s)	999
EcoO65I	GGTNACC	1 cut(s)	534
EcoRII	CCWGG	6 cut(s)	148, 655, 700, 1087, 1195, 1492
EcoRV	GATATC	1 cut(s)	1193
EcoT14I	CCWWGG	3 cut(s)	64, 790, 1579
EcoT22I	ATGCAT	1 cut(s)	1590
ErhI	CCWWGG	3 cut(s)	64, 790, 1579
FalI	AAGNNNNNCTT	2 cut(s)	48, 80
FaqI	GGGAC	2 cut(s)	516, 1827
FauNDI	CATATG	2 cut(s)	393, 754
Fnu4HI	GCNGC	6 cut(s)	678, 730, 826, 1155, 1807, 1889
FokI	GGATG	8 cut(s)	120, 639, 904, 953, 1562, 1645, 1758, 1968
Fsp4HI	GCNGC	6 cut(s)	678, 730, 826, 1155, 1807, 1889
FspBI	CTAG	9 cut(s)	348, 479, 818, 849, 1025, 1032, 1266, 1295, 1992
GlaI	GCGC	2 cut(s)	1750, 1752
GluI	GCNGC	6 cut(s)	678, 730, 826, 1155, 1807, 1889
GsuI	CTGGAG	4 cut(s)	1071, 1095, 1218, 1935
HaeIII	GGCC	4 cut(s)	364, 882, 1154, 1920
HapII	CCGG	4 cut(s)	813, 938, 1620, 1931
HhaI	GCGC	2 cut(s)	1751, 1753
Hin6I	GCGC	2 cut(s)	1749, 1751
HinP1I	GCGC	2 cut(s)	1749, 1751
HindIII	AAGCTT	1 cut(s)	1006
HinfI	GANTC	4 cut(s)	34, 504, 991, 1873
HpaII	CCGG	4 cut(s)	813, 938, 1620, 1931
HphI	GGTGA	4 cut(s)	528, 864, 1128, 1296
Hpy166II	GTNNAC	5 cut(s)	19, 271, 646, 665, 1304
Hpy188I	TCNGA	5 cut(s)	33, 160, 264, 607, 1549
Hpy188III	TCNNGA	8 cut(s)	53, 938, 1214, 1457, 1620, 1914, 2010, 2040
Hpy8I	GTNNAC	5 cut(s)	19, 271, 646, 665, 1304
Hpy99I	CGWCG	1 cut(s)	1483
HpyAV	CCTTC	6 cut(s)	894, 1005, 1047, 1731, 1776, 1905
HpyCH4III	ACNGT	3 cut(s)	16, 1067, 1634
HpyF10VI	GCNNNNNNNGC	6 cut(s)	320, 795, 1409, 1748, 1825, 1947
HpyF3I	CTNAG	8 cut(s)	173, 444, 1275, 1384, 1467, 1569, 1592, 1651
HspAI	GCGC	2 cut(s)	1749, 1751
Kpn2I	TCCGGA	2 cut(s)	937, 1619
KpnI	GGTACC	1 cut(s)	813
Kzo9I	GATC	6 cut(s)	7, 47, 517, 1133, 1489, 1504
LmnI	GCTCC	3 cut(s)	152, 1018, 1424
Lsp1109I	GCAGC	4 cut(s)	664, 741, 837, 1900
LweI	GCATC	5 cut(s)	931, 1597, 1736, 1875, 2015
MaeI	CTAG	9 cut(s)	348, 479, 818, 849, 1025, 1032, 1266, 1295, 1992
MaeIII	GTNAC	7 cut(s)	38, 412, 534, 565, 836, 1379, 1987
MalI	GATC	6 cut(s)	9, 49, 519, 1135, 1491, 1506
MboI	GATC	6 cut(s)	7, 47, 517, 1133, 1489, 1504
MboII	GAAGA	9 cut(s)	17, 416, 445, 461, 1520, 1550, 1635, 1894, 2028
MfeI	CAATTG	1 cut(s)	1123
MflI	RGATCY	1 cut(s)	1504
MhlI	GDGCHC	1 cut(s)	273
MlyI	GAGTC	3 cut(s)	43, 498, 1000
MmeI	TCCRAC	1 cut(s)	1127
Mph1103I	ATGCAT	1 cut(s)	1590
MroI	TCCGGA	2 cut(s)	937, 1619
MroXI	GAANNNNTTC	2 cut(s)	126, 1527
MseI	TTAA	9 cut(s)	222, 252, 326, 387, 459, 1170, 1322, 1629, 1908
MslI	CAYNNNNRTG	5 cut(s)	641, 657, 975, 1448, 1883
MspA1I	CMGCKG	1 cut(s)	1828
MspCI	CTTAAG	1 cut(s)	221
MspI	CCGG	4 cut(s)	813, 938, 1620, 1931
MspR9I	CCNGG	7 cut(s)	150, 657, 702, 1089, 1197, 1494, 1932
MunI	CAATTG	1 cut(s)	1123
Mva1269I	GAATGC	2 cut(s)	258, 1995
MvaI	CCWGG	6 cut(s)	150, 657, 702, 1089, 1197, 1494
MvnI	CGCG	2 cut(s)	1751, 1753
MwoI	GCNNNNNNNGC	6 cut(s)	320, 795, 1409, 1748, 1825, 1947
NciI	CCSGG	1 cut(s)	1932
NcoI	CCATGG	1 cut(s)	790
NdeI	CATATG	2 cut(s)	393, 754
NdeII	GATC	6 cut(s)	7, 47, 517, 1133, 1489, 1504
NlaIV	GGNNCC	8 cut(s)	576, 750, 811, 1258, 1420, 1506, 1618, 1681
NmuCI	GTSAC	2 cut(s)	534, 1987
NsiI	ATGCAT	1 cut(s)	1590
NspI	RCATGY	7 cut(s)	622, 764, 901, 1399, 1588, 1703, 1960
OliI	CACNNNNGTG	1 cut(s)	1448
PaeI	GCATGC	1 cut(s)	1588
PagI	TCATGA	1 cut(s)	1456
PaqCI	CACCTGC	1 cut(s)	2011
PauI	GCGCGC	1 cut(s)	1749
PciI	ACATGT	1 cut(s)	1699
PcsI	WCGNNNNNNNCGW	1 cut(s)	43
PctI	GAATGC	2 cut(s)	258, 1995
PdmI	GAANNNNTTC	2 cut(s)	126, 1527
PfeI	GAWTC	1 cut(s)	1873
PflMI	CCANNNNNTGG	2 cut(s)	371, 1742
PfoI	TCCNGGA	3 cut(s)	1087, 1195, 1930
PkrI	GCNGC	6 cut(s)	679, 731, 827, 1156, 1808, 1890
PleI	GAGTC	3 cut(s)	42, 498, 999
PpsI	GAGTC	3 cut(s)	42, 498, 999
PscI	ACATGT	1 cut(s)	1699
PsiI	TTATAA	1 cut(s)	594
Psp6I	CCWGG	6 cut(s)	148, 655, 700, 1087, 1195, 1492
PspEI	GGTNACC	1 cut(s)	534
PspGI	CCWGG	6 cut(s)	148, 655, 700, 1087, 1195, 1492
PspN4I	GGNNCC	8 cut(s)	576, 750, 811, 1258, 1420, 1506, 1618, 1681
PspPI	GGNCC	8 cut(s)	99, 646, 881, 1100, 1617, 1655, 1679, 1919
PstI	CTGCAG	1 cut(s)	1603
PsuI	RGATCY	1 cut(s)	1504
PteI	GCGCGC	1 cut(s)	1749
RsaI	GTAC	2 cut(s)	219, 811
RsaNI	GTAC	2 cut(s)	218, 810
RseI	CAYNNNNRTG	5 cut(s)	641, 657, 975, 1448, 1883
SaqAI	TTAA	9 cut(s)	222, 252, 326, 387, 459, 1170, 1322, 1629, 1908
SatI	GCNGC	6 cut(s)	678, 730, 826, 1155, 1807, 1889
Sau3AI	GATC	6 cut(s)	7, 47, 517, 1133, 1489, 1504
Sau96I	GGNCC	8 cut(s)	99, 646, 881, 1100, 1617, 1655, 1679, 1919
SchI	GAGTC	3 cut(s)	43, 498, 1000
ScrFI	CCNGG	7 cut(s)	150, 657, 702, 1089, 1197, 1494, 1932
SduI	GDGCHC	1 cut(s)	273
SfaNI	GCATC	5 cut(s)	931, 1597, 1736, 1875, 2015
SfcI	CTRYAG	3 cut(s)	1063, 1513, 1599
SinI	GGWCC	6 cut(s)	99, 646, 1100, 1617, 1655, 1679
SmiMI	CAYNNNNRTG	5 cut(s)	641, 657, 975, 1448, 1883
SmlI	CTYRAG	2 cut(s)	221, 1212
SmoI	CTYRAG	2 cut(s)	221, 1212
SpeI	ACTAGT	2 cut(s)	848, 1031
SphI	GCATGC	1 cut(s)	1588
SsiI	CCGC	4 cut(s)	1052, 1155, 1807, 1828
SspI	AATATT	1 cut(s)	697
SspMI	CTAG	9 cut(s)	348, 479, 818, 849, 1025, 1032, 1266, 1295, 1992
StyD4I	CCNGG	7 cut(s)	148, 655, 700, 1087, 1195, 1492, 1930
StyI	CCWWGG	3 cut(s)	64, 790, 1579
TaaI	ACNGT	3 cut(s)	16, 1067, 1634
TaqI	TCGA	2 cut(s)	10, 46
TatI	WGTACW	1 cut(s)	217
TauI	GCSGC	2 cut(s)	1157, 1809
TfiI	GAWTC	1 cut(s)	1873
Tru1I	TTAA	9 cut(s)	222, 252, 326, 387, 459, 1170, 1322, 1629, 1908
Tru9I	TTAA	9 cut(s)	222, 252, 326, 387, 459, 1170, 1322, 1629, 1908
TscAI	CASTG	2 cut(s)	784, 1369
TseFI	GTSAC	2 cut(s)	534, 1987
TseI	GCWGC	4 cut(s)	677, 729, 825, 1888
Tsp45I	GTSAC	2 cut(s)	534, 1987
TspGWI	ACGGA	4 cut(s)	414, 855, 964, 1854
TspRI	CASTG	2 cut(s)	784, 1369
Van91I	CCANNNNNTGG	2 cut(s)	371, 1742
Vha464I	CTTAAG	1 cut(s)	221
VneI	GTGCAC	1 cut(s)	269
VpaK11BI	GGWCC	6 cut(s)	99, 646, 1100, 1617, 1655, 1679
XagI	CCTNNNNNAGG	1 cut(s)	999
XapI	RAATTY	4 cut(s)	161, 1430, 1642, 1795
XceI	RCATGY	7 cut(s)	622, 764, 901, 1399, 1588, 1703, 1960
XcmI	CCANNNNNNNNNTGG	1 cut(s)	656
XmnI	GAANNNNTTC	2 cut(s)	126, 1527
XspI	CTAG	9 cut(s)	348, 479, 818, 849, 1025, 1032, 1266, 1295, 1992
Zsp2I	ATGCAT	1 cut(s)	1590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.