Rroxscaffold_1G00045450

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
64425239 .. 64426927
1689 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00045450.1

Sequence Viewer

Length: 309 bp
ATGCGGCCGTATGTAAATGAGGCAGCTTCTAAGTTGATTGAGGCTTCGGTGGAGCCAATGCGGAGCGAGTATACGCCTATGATATTGTCCTCAATCAAGTTTTCGAAGTTCACTCGGTCTTGTGGCACCTCGGTTTACGGGTCAGTTCAATTCAATGCGGCGCTTTTCTTTGTTAGAGAATTGAAAAGACCATCAATTGGGAAGGAGTATTTTAATCTTATGAACGTTGAAGAAATTGTTACAAACTATCCATATCGGAAGAACTTGCCTAAGGAAGACATGATTAAAGGTTTGGTCAATGCTATTTAA

Protein Analysis

102

Amino Acids

11.7

Weight (kDa)

9.3

Isoelectric Point (pI)

35.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 125
AccB7I CCANNNNNTGG 1 cut(s) 197
AccI GTMKAC 1 cut(s) 71
AciI CCGC 3 cut(s) 4, 61, 158
AclI AACGTT 1 cut(s) 225
AcoI YGGCCR 1 cut(s) 5
AfiI CCNNNNNNNGG 1 cut(s) 197
AgsI TTSAA 4 cut(s) 149, 154, 184, 230
AluBI AGCT 1 cut(s) 26
AluI AGCT 1 cut(s) 26
AoxI GGCC 1 cut(s) 5
ApeKI GCWGC 1 cut(s) 23
AspLEI GCGC 1 cut(s) 163
AsuII TTCGAA 1 cut(s) 104
AxyI CCTNAGG 1 cut(s) 270
BanI GGYRCC 1 cut(s) 125
BbsI GAAGAC 1 cut(s) 282
BbvI GCAGC 1 cut(s) 35
BccI CCATC 1 cut(s) 199
BfoI RGCGCY 1 cut(s) 164
BisI GCNGC 3 cut(s) 5, 24, 159
BlsI GCNGC 3 cut(s) 6, 25, 160
BmiI GGNNCC 2 cut(s) 54, 127
BpiI GAAGAC 1 cut(s) 282
Bpu14I TTCGAA 1 cut(s) 104
BsaJI CCNNGG 1 cut(s) 129
Bsc4I CCNNNNNNNGG 1 cut(s) 197
Bse21I CCTNAGG 1 cut(s) 270
BseDI CCNNGG 1 cut(s) 129
BseLI CCNNNNNNNGG 1 cut(s) 197
BseX3I CGGCCG 1 cut(s) 5
BseXI GCAGC 1 cut(s) 35
Bsh1285I CGRYCG 1 cut(s) 8
BshFI GGCC 1 cut(s) 7
BshNI GGYRCC 1 cut(s) 125
BsiEI CGRYCG 1 cut(s) 8
BslI CCNNNNNNNGG 1 cut(s) 197
BsnI GGCC 1 cut(s) 7
Bsp119I TTCGAA 1 cut(s) 104
BspACI CCGC 3 cut(s) 4, 61, 158
BspANI GGCC 1 cut(s) 7
BspLI GGNNCC 2 cut(s) 54, 127
BspT104I TTCGAA 1 cut(s) 104
BspT107I GGYRCC 1 cut(s) 125
BssECI CCNNGG 1 cut(s) 129
BssNAI GTATAC 1 cut(s) 72
Bst1107I GTATAC 1 cut(s) 72
BstBI TTCGAA 1 cut(s) 104
BstDEI CTNAG 2 cut(s) 30, 270
BstH2I RGCGCY 1 cut(s) 164
BstHHI GCGC 1 cut(s) 163
BstMCI CGRYCG 1 cut(s) 8
BstV1I GCAGC 1 cut(s) 35
BstV2I GAAGAC 1 cut(s) 282
BstZ17I GTATAC 1 cut(s) 72
BstZI CGGCCG 1 cut(s) 5
Bsu36I CCTNAGG 1 cut(s) 270
BsuRI GGCC 1 cut(s) 7
CfoI GCGC 1 cut(s) 163
CviAII CATG 1 cut(s) 280
CviJI RGCY 4 cut(s) 7, 26, 44, 55
CviKI_1 RGCY 4 cut(s) 7, 26, 44, 55
DdeI CTNAG 2 cut(s) 30, 270
EaeI YGGCCR 1 cut(s) 5
EagI CGGCCG 1 cut(s) 5
EclXI CGGCCG 1 cut(s) 5
Eco52I CGGCCG 1 cut(s) 5
Eco81I CCTNAGG 1 cut(s) 270
FaeI CATG 1 cut(s) 283
FaiI YATR 6 cut(s) 12, 72, 80, 221, 253, 281
FatI CATG 1 cut(s) 279
FblI GTMKAC 1 cut(s) 71
Fnu4HI GCNGC 3 cut(s) 5, 24, 159
Fsp4HI GCNGC 3 cut(s) 5, 24, 159
GlaI GCGC 1 cut(s) 162
GluI GCNGC 3 cut(s) 5, 24, 159
HaeII RGCGCY 1 cut(s) 164
HaeIII GGCC 1 cut(s) 7
HhaI GCGC 1 cut(s) 163
Hin1II CATG 1 cut(s) 283
Hin6I GCGC 1 cut(s) 161
HinP1I GCGC 1 cut(s) 161
Hpy166II GTNNAC 3 cut(s) 72, 111, 136
Hpy188I TCNGA 1 cut(s) 258
Hpy8I GTNNAC 3 cut(s) 72, 111, 136
HpyAV CCTTC 1 cut(s) 196
HpyCH4IV ACGT 1 cut(s) 225
HpyF3I CTNAG 2 cut(s) 30, 270
HpySE526I ACGT 1 cut(s) 225
Hsp92II CATG 1 cut(s) 283
HspAI GCGC 1 cut(s) 161
LmnI GCTCC 2 cut(s) 52, 63
Lsp1109I GCAGC 1 cut(s) 35
MaeII ACGT 1 cut(s) 225
MaeIII GTNAC 1 cut(s) 238
MboII GAAGA 3 cut(s) 242, 271, 287
MfeI CAATTG 1 cut(s) 195
MluCI AATT 4 cut(s) 149, 179, 195, 234
MnlI CCTC 4 cut(s) 13, 34, 100, 139
MseI TTAA 3 cut(s) 213, 285, 307
MunI CAATTG 1 cut(s) 195
NlaIII CATG 1 cut(s) 283
NlaIV GGNNCC 2 cut(s) 54, 127
NspV TTCGAA 1 cut(s) 104
PflMI CCANNNNNTGG 1 cut(s) 197
PkrI GCNGC 3 cut(s) 6, 25, 160
Psp1406I AACGTT 1 cut(s) 225
PspN4I GGNNCC 2 cut(s) 54, 127
SaqAI TTAA 3 cut(s) 213, 285, 307
SatI GCNGC 3 cut(s) 5, 24, 159
SetI ASST 4 cut(s) 28, 131, 228, 292
SfuI TTCGAA 1 cut(s) 104
SgeI CNNG 8 cut(s) 79, 109, 126, 132, 142, 151, 277, 292
Sse9I AATT 4 cut(s) 149, 179, 195, 234
SsiI CCGC 3 cut(s) 4, 61, 158
TaiI ACGT 1 cut(s) 228
TaqI TCGA 1 cut(s) 104
TaqII GACCGA 1 cut(s) 105
TasI AATT 4 cut(s) 149, 179, 195, 234
TauI GCSGC 2 cut(s) 7, 161
Tru1I TTAA 3 cut(s) 213, 285, 307
Tru9I TTAA 3 cut(s) 213, 285, 307
TseI GCWGC 1 cut(s) 23
TspDTI ATGAA 1 cut(s) 236
Van91I CCANNNNNTGG 1 cut(s) 197
XmiI GTMKAC 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.