Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0006352

Physical Location & Seq

Genomic Coordinates Forward (+)

69718774 .. 69727988

Gene Structure 9215 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG446000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGGATGAGCTCAGCCCTACTCCTGCCTCTTCGTGGCGTCCCAGTCACCTGGTCTTTACTCCATATTCCACGCAGGCTGAAGCTGCGAGCAACAAGTCCCAACCTTTACGCGTTATCAGAAGACCGTTTGTGGCAAGATTAACTAAGGACATAGTTGAAACATACCGAATCTGCAATCCACAGTTTAAGTATTCAGAAGAACTGAATCCAAAGAGATATTTGACCAGCCCGTCAATTGGAGTACTCAATGAAGGCCACGATAATGTTAACTCGGATCTTATTCTGACAGTAAACTTTGTCTTGGTCAATTTAGACACACATCGAAGATACATCGTCAAAGATGTTCTTGGCCATGGGACATTTGGCCAGGTTGCTAAATGCTGGGTTCCAGAGACTAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCAGCATACTATCAACAGGCACTGGTTGAAGTATCCATTTTGACAACGTTAAACAAGAAATATGATCCTGAGGACAAGCATCACATTGTTCGTATTTATGATTACTTTGTATATCATCGTCATTTGTGCATTTGTTTTGAACTGCTTGATACTAATCTGTATGAGCTTATCAAGATAAATCAATTCAGGGGGCTGTCCTTGACCATTGTCCAATTGTTCTCTAAACAAATTCTACATGGGTTAGCCCTGTTAAAGGATGCTGGGATAATTCACTGTGATCTGAAGCCAGAAAACATTCTTTTATGCACAAGTGTTAAGCCAGCAGAAATTAAAATTATTGACTTTGGATCTGCATGCATGGAAGATCGAACTGTTTACTCCTACATTCAGAGTCGTTACTACAGGTCCCCTGAAGTCCTGCTTGGATATCAATATACTACTGCTATCGATATGTGGTCCTTTGGATGCATAGTTGCTGAACTGTTTCTAGGATTGCCATTATTTCCAGGAGCTTCAGAATTTGACCTCTTAAGGAGAATGATTGAAATACTTGGAGGGCAACCCCCGGATTATGTACTTAAGGAGGCAAAAAACACAAGCAAGTTCTTTAAGTGCATTCGGAGTGTGCACAGTATGGAGAACGGAGAATTTTCTGCAACTGGCAAAAGTTCTTATCAAGCTTTAACAGAGGAAGAATATGAAGCTAGAGAATTGAAAAGACCATCAATTGGGAAGGAGTATTTTAATCATATGAACCTTGAAGAAATTGTTACAAAATATCCATATCGGAAGAACTTGCCTAAGGAAGATATGATTAAAGAAAGTCAGATACGATTAGCTTTGGTTGATTTTTTGAGGGGCCTTGTTGAGTTTGATCCTTCAAAACGCTGGTCACCTTTTCAGGCTTCAAAACACCCTTTTGTTACGGGGGAACCTTTTACTTGCCCTTATCAACCTCCATCAGAGACTCCTCGCATGCCTGTTGCTCAAAACATAAGGGTAGATCATCATCCTGGTGGTGGGCATTGGTTTGCTGCGGGTCTCTCTCCTAATATTCCAGGCAGAAACAGGGTCTCCATGCATAGCAGCCCACATTTTCAGGTGGTGCCACCATATGCACATGCTAATAGCTATGGTAGTGTAGGAAGCCATGGCAGTTATAATGATGGTACTGGACTGGGAAGCAGCTATGGTAGCTATGGAGATACTGGTAATATGTTTGCTTATTATTCACCAGTTGGTCCATCTGGGATGAACATGCATGCTCAAGGCAATGCGTCAATGCTTGGAAGTAGTCCTGATGCAAGACGGAGGATTATCCCATATTCACATGGAAATGGACTTGGTATGAGCCCTTCAGCAGGAAGTTTTGCTCCTCTGCCCCTAGGCACTAGTCCTTCACAATTTACTCCACCAAGTTCCTACGGTCAAGTTTCTGCTGGCTCCCCGGGACATTATGGTCCAACTTCTCCAGCAAGAGGCAGTTGTCACGGATCACCTTTAGGAAAGATGGCTGCAGTTAGTCAGTTCAATAGAAGAAAAAGTTGGGGATATCCTGGAGGTTCTCAAACTCAGGAGAGTTCGTCTTCTCATTGGCAAGGGCAAACTACAGATGGCATCAGTTCTGGCAAAGCTGAGGGGAATTCTCAAGTAGTTGGTGGTTCCCCATCACATCTACCTCTAAGTTCTAGTGCTGGAAGCTGGAAACAGCAGCGAGGAGGCAGTGGAAGTTCTGCTGGCTACTTAGCCACTCCAAACATGCCAAGCTCCTTCAAGGTTGGTTCCAGTATCCCAAAGACCACAGGAGTGGCTCATGACAATTCGGAGGCTAGCCTGTCATTGCCTGATCCTGGGGATTGGGATCCCAATTATAGGTATAACTGGACGATACCTTTTAATTGCTACTCAAATATATGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009267 GO:0009605 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0009991 GO:0010033 GO:0010468 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0019932 GO:0019933 GO:0019935 GO:0023052 GO:0030587 GO:0031152 GO:0031667 GO:0031668 GO:0031669 GO:0032502 GO:0033554 GO:0035556 GO:0036211 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042594 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044764 GO:0045472 GO:0046677 GO:0048518 GO:0048519 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051409 GO:0051703 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0071496 GO:0071704 GO:0090702 GO:0097327 GO:0098630 GO:0098743 GO:0099120 GO:0140096 GO:1901564 GO:1901654 GO:1901700 GO:1904643

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

783

Amino Acids

86.52

Weight (kDa)

8.47

Isoelectric Point (pI)

51.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	110 - 452	1.2e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	113 - 324	2e-21	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35980 AT5G35980 AT5G35980
fragaria_vesca	FvH4_7g34270 FvH4_7g34270 FvH4_7g34270 FvH4_7g34270
malus_domestica	MD01G1239700.v1.1 MD07G1311600.v1.1
prunus_persica	Prupe.2G329600_v2.0.a1 Prupe.2G329600_v2.0.a1
pyrus_communis	pycom07g28380
rosa_chinensis	RchiOBHm_Chr1g0384621
rosa_laevigata	RLG00000026026
rosa_multiflora	Rmu_co8382885.1_g000001 Rmu_sc0012136.1_g000028
rosa_roxburghii	Rroxscaffold_1G00045450
rosa_rugosa	Rorug01G0450200
rosa_samantha	Rh1AG474700 Rh1BG432800 Rh1CG446000 Rh1DG465400 Rh2AG390000 Rh3CG154800 Rh3DG155900 Rh4CG245100
rosa_wichuraiana	Rw1G039790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1593
AasI	GACNNNNNNGTC	2 cut(s)	229, 1890
AccB1I	GGYRCC	1 cut(s)	1537
AccB7I	CCANNNNNTGG	1 cut(s)	1160
AccII	CGCG	1 cut(s)	111
AciI	CCGC	1 cut(s)	1469
AclI	AACGTT	1 cut(s)	479
AclWI	GGATC	8 cut(s)	282, 491, 787, 1301, 1933, 2273, 2288, 2301
AcoI	YGGCCR	2 cut(s)	349, 364
AcsI	RAATTY	4 cut(s)	660, 950, 1079, 2074
AcuI	CTGAAG	5 cut(s)	99, 734, 864, 930, 1773
AcyI	GRCGYC	1 cut(s)	37
AfaI	GTAC	3 cut(s)	243, 1008, 1603
AfiI	CCNNNNNNNGG	9 cut(s)	33, 236, 685, 1160, 1451, 1793, 1910, 2282, 2304
AflII	CTTAAG	2 cut(s)	961, 1010
AflIII	ACRYGT	1 cut(s)	109
AhlI	ACTAGT	1 cut(s)	1823
AjnI	CCWGG	7 cut(s)	48, 366, 937, 1444, 1489, 1987, 2281
AjuI	GAANNNNNNNTTGG	4 cut(s)	837, 869, 1960, 1992
AleI	CACNNNNGTG	1 cut(s)	2237
Alw21I	GWGCWC	2 cut(s)	12, 1062
Alw26I	GTCTC	4 cut(s)	386, 1391, 1478, 1510
Alw44I	GTGCAC	1 cut(s)	1058
AlwI	GGATC	8 cut(s)	282, 491, 787, 1301, 1933, 2273, 2288, 2301
AlwNI	CAGNNNCTG	1 cut(s)	454
Ama87I	CYCGRG	1 cut(s)	1879
AoxI	GGCC	4 cut(s)	253, 349, 364, 1291
ApaLI	GTGCAC	1 cut(s)	1058
ApeKI	GCWGC	6 cut(s)	83, 1466, 1518, 1617, 1946, 2143
ApoI	RAATTY	4 cut(s)	660, 950, 1079, 2074
ArsI	GACNNNNNNTTYG	2 cut(s)	1307, 1339
Asp700I	GAANNNNTTC	2 cut(s)	726, 915
AspA2I	CCTAGG	1 cut(s)	1816
AspS9I	GGNCC	5 cut(s)	837, 888, 1291, 1673, 1892
AsuC2I	CCSGG	3 cut(s)	998, 1880, 1881
AsuHPI	GGTGA	4 cut(s)	38, 1317, 1656, 1920
AsuNHI	GCTAGC	1 cut(s)	2261
AvaI	CYCGRG	1 cut(s)	1879
AvaII	GGWCC	4 cut(s)	837, 888, 1673, 1892
AvrII	CCTAGG	1 cut(s)	1816
AxyI	CCTNAGG	2 cut(s)	501, 1233
BaeGI	GKGCMC	1 cut(s)	1062
BalI	TGGCCA	2 cut(s)	351, 366
BamHI	GGATCC	1 cut(s)	2293
BanI	GGYRCC	1 cut(s)	1537
BanII	GRGCYC	2 cut(s)	12, 1787
BarI	GAAGNNNNNNTAC	2 cut(s)	1771, 1803
BbsI	GAAGAC	2 cut(s)	127, 2010
Bbv12I	GWGCWC	2 cut(s)	12, 1062
BbvCI	CCTCAGC	1 cut(s)	2067
BbvI	GCAGC	6 cut(s)	70, 1453, 1530, 1629, 1933, 2155
BccI	CCATC	7 cut(s)	1162, 1399, 1592, 1684, 1936, 2039, 2107
BciT130I	CCWGG	7 cut(s)	50, 368, 939, 1446, 1491, 1989, 2283
BciVI	GTATCC	2 cut(s)	475, 2231
BcnI	CCSGG	3 cut(s)	998, 1880, 1881
BcoDI	GTCTC	4 cut(s)	386, 1391, 1478, 1510
BcuI	ACTAGT	1 cut(s)	1823
BfaI	CTAG	6 cut(s)	920, 1137, 1817, 1824, 2121, 2262
BfmI	CTRYAG	3 cut(s)	832, 1947, 2040
BfrI	CTTAAG	2 cut(s)	961, 1010
BfuI	GTATCC	2 cut(s)	475, 2231
BisI	GCNGC	6 cut(s)	84, 1467, 1519, 1618, 1947, 2144
BlnI	CCTAGG	1 cut(s)	1816
BlpI	GCTNAGC	1 cut(s)	11
BlsI	GCNGC	6 cut(s)	85, 1468, 1520, 1619, 1948, 2145
BmcAI	AGTACT	1 cut(s)	243
Bme18I	GGWCC	4 cut(s)	837, 888, 1673, 1892
BmeT110I	CYCGRG	1 cut(s)	1879
BmgT120I	GGNCC	5 cut(s)	837, 888, 1291, 1673, 1892
BmiI	GGNNCC	9 cut(s)	387, 839, 1292, 1365, 1539, 1876, 2095, 2215, 2295
BmrI	ACTGGG	2 cut(s)	36, 1619
BmsI	GCATC	5 cut(s)	520, 679, 887, 1723, 2058
BmtI	GCTAGC	1 cut(s)	2265
BmuI	ACTGGG	2 cut(s)	36, 1619
BoxI	GACNNNNGTC	1 cut(s)	638
BpiI	GAAGAC	2 cut(s)	127, 2010
BpmI	CTGGAG	2 cut(s)	1887, 2010
Bpu10I	CCTNAGC	1 cut(s)	2067
Bpu1102I	GCTNAGC	1 cut(s)	11
BpuEI	CTTGAG	2 cut(s)	1683, 2064
BpuMI	CCSGG	3 cut(s)	998, 1880, 1881
Bsa29I	ATCGAT	1 cut(s)	879
BsaBI	GATNNNNATC	3 cut(s)	585, 1440, 2292
BsaHI	GRCGYC	1 cut(s)	37
BsaI	GGTCTC	2 cut(s)	1478, 1510
BsaJI	CCNNGG	7 cut(s)	352, 996, 1582, 1816, 1878, 1879, 2282
BsaXI	ACNNNNNCTCC	4 cut(s)	1490, 1520, 2000, 2030
Bsc4I	CCNNNNNNNGG	9 cut(s)	33, 236, 685, 1160, 1451, 1793, 1910, 2282, 2304
Bse1I	ACTGG	9 cut(s)	42, 459, 1096, 1609, 1614, 1645, 1667, 2217, 2318
Bse21I	CCTNAGG	2 cut(s)	501, 1233
Bse3DI	GCAATG	2 cut(s)	1711, 2270
Bse8I	GATNNNNATC	3 cut(s)	585, 1440, 2292
BseBI	CCWGG	7 cut(s)	50, 368, 939, 1446, 1491, 1989, 2283
BseCI	ATCGAT	1 cut(s)	879
BseDI	CCNNGG	7 cut(s)	352, 996, 1582, 1816, 1878, 1879, 2282
BseGI	GGATG	5 cut(s)	10, 694, 902, 1441, 1689
BseJI	GATNNNNATC	3 cut(s)	585, 1440, 2292
BseLI	CCNNNNNNNGG	9 cut(s)	33, 236, 685, 1160, 1451, 1793, 1910, 2282, 2304
BseMI	GCAATG	2 cut(s)	1711, 2270
BseMII	CTCAG	4 cut(s)	25, 492, 2018, 2058
BseNI	ACTGG	9 cut(s)	42, 459, 1096, 1609, 1614, 1645, 1667, 2217, 2318
BseRI	GAGGAG	3 cut(s)	1392, 1797, 2163
BseSI	GKGCMC	1 cut(s)	1062
BseXI	GCAGC	6 cut(s)	70, 1453, 1530, 1629, 1933, 2155
BseYI	CCCAGC	2 cut(s)	381, 692
Bsh1236I	CGCG	1 cut(s)	111
BshFI	GGCC	4 cut(s)	255, 351, 366, 1293
BshNI	GGYRCC	1 cut(s)	1537
BshVI	ATCGAT	1 cut(s)	879
BsiHKAI	GWGCWC	2 cut(s)	12, 1062
BsiHKCI	CYCGRG	1 cut(s)	1879
BsiSI	CCGG	2 cut(s)	998, 1880
BslFI	GGGAC	5 cut(s)	24, 82, 370, 823, 1896
BslI	CCNNNNNNNGG	9 cut(s)	33, 236, 685, 1160, 1451, 1793, 1910, 2282, 2304
BsmAI	GTCTC	4 cut(s)	386, 1391, 1478, 1510
BsmFI	GGGAC	5 cut(s)	24, 82, 370, 823, 1896
BsmI	GAATGC	1 cut(s)	1047
BsnI	GGCC	4 cut(s)	255, 351, 366, 1293
Bso31I	GGTCTC	2 cut(s)	1478, 1510
BsoBI	CYCGRG	1 cut(s)	1879
Bsp1286I	GDGCHC	3 cut(s)	12, 1062, 1787
Bsp1720I	GCTNAGC	1 cut(s)	11
Bsp19I	CCATGG	2 cut(s)	352, 1582
BspACI	CCGC	1 cut(s)	1469
BspANI	GGCC	4 cut(s)	255, 351, 366, 1293
BspCNI	CTCAG	4 cut(s)	24, 493, 2017, 2059
BspDI	ATCGAT	1 cut(s)	879
BspFNI	CGCG	1 cut(s)	111
BspHI	TCATGA	1 cut(s)	2245
BspLI	GGNNCC	9 cut(s)	387, 839, 1292, 1365, 1539, 1876, 2095, 2215, 2295
BspMAI	CTGCAG	1 cut(s)	1951
BspOI	GCTAGC	1 cut(s)	2265
BspPI	GGATC	8 cut(s)	282, 491, 787, 1301, 1933, 2273, 2288, 2301
BspT107I	GGYRCC	1 cut(s)	1537
BspTI	CTTAAG	2 cut(s)	961, 1010
BspTNI	GGTCTC	2 cut(s)	1478, 1510
BsrDI	GCAATG	2 cut(s)	1711, 2270
BsrI	ACTGG	9 cut(s)	42, 459, 1096, 1609, 1614, 1645, 1667, 2217, 2318
BssECI	CCNNGG	7 cut(s)	352, 996, 1582, 1816, 1878, 1879, 2282
BssNI	GRCGYC	1 cut(s)	37
BssT1I	CCWWGG	3 cut(s)	352, 1582, 1816
Bst2UI	CCWGG	7 cut(s)	50, 368, 939, 1446, 1491, 1989, 2283
Bst4CI	ACNGT	9 cut(s)	126, 183, 289, 401, 707, 805, 915, 1064, 1859
Bst6I	CTCTTC	1 cut(s)	34
BstACI	GRCGYC	1 cut(s)	37
BstAFI	CTTAAG	2 cut(s)	961, 1010
BstC8I	GCNNGC	9 cut(s)	75, 88, 753, 787, 1409, 1695, 1873, 2170, 2263
BstDEI	CTNAG	8 cut(s)	11, 144, 501, 1233, 2004, 2067, 2114, 2176
BstDSI	CCRYGG	2 cut(s)	352, 1582
BstEII	GGTNACC	1 cut(s)	1323
BstENI	CCTNNNNNAGG	2 cut(s)	683, 1791
BstF5I	GGATG	5 cut(s)	10, 694, 902, 1441, 1689
BstFNI	CGCG	1 cut(s)	111
BstMAI	GTCTC	4 cut(s)	386, 1391, 1478, 1510
BstMWI	GCNNNNNNNGC	2 cut(s)	83, 1626
BstNI	CCWGG	7 cut(s)	50, 368, 939, 1446, 1491, 1989, 2283
BstNSI	RCATGY	6 cut(s)	789, 1411, 1556, 1693, 1697, 2194
BstPAI	GACNNNNGTC	1 cut(s)	638
BstPI	GGTNACC	1 cut(s)	1323
BstSFI	CTRYAG	3 cut(s)	832, 1947, 2040
BstSLI	GKGCMC	1 cut(s)	1062
BstUI	CGCG	1 cut(s)	111
BstV1I	GCAGC	6 cut(s)	70, 1453, 1530, 1629, 1933, 2155
BstV2I	GAAGAC	2 cut(s)	127, 2010
BstX2I	RGATCY	3 cut(s)	274, 779, 2293
BstXI	CCANNNNNNTGG	2 cut(s)	49, 2239
BstYI	RGATCY	3 cut(s)	274, 779, 2293
Bsu15I	ATCGAT	1 cut(s)	879
Bsu36I	CCTNAGG	2 cut(s)	501, 1233
BsuI	GTATCC	2 cut(s)	475, 2231
BsuRI	GGCC	4 cut(s)	255, 351, 366, 1293
BsuTUI	ATCGAT	1 cut(s)	879
BtgI	CCRYGG	2 cut(s)	352, 1582
BtsCI	GGATG	5 cut(s)	10, 694, 902, 1441, 1689
BtsI	GCAGTG	1 cut(s)	2161
BtsIMutI	CAGTG	3 cut(s)	452, 703, 2161
Cac8I	GCNNGC	9 cut(s)	75, 88, 753, 787, 1409, 1695, 1873, 2170, 2263
CaiI	CAGNNNCTG	1 cut(s)	454
CciI	TCATGA	1 cut(s)	2245
Cfr13I	GGNCC	5 cut(s)	837, 888, 1291, 1673, 1892
Cfr9I	CCCGGG	1 cut(s)	1879
ClaI	ATCGAT	1 cut(s)	879
CseI	GACGC	2 cut(s)	26, 1698
CsiI	ACCWGGT	1 cut(s)	48
Csp6I	GTAC	3 cut(s)	242, 1007, 1602
CviQI	GTAC	3 cut(s)	242, 1007, 1602
DdeI	CTNAG	8 cut(s)	11, 144, 501, 1233, 2004, 2067, 2114, 2176
DrdI	GACNNNNNNGTC	2 cut(s)	229, 1890
DseDI	GACNNNNNNGTC	2 cut(s)	229, 1890
EaeI	YGGCCR	2 cut(s)	349, 364
Eam1104I	CTCTTC	1 cut(s)	34
EarI	CTCTTC	1 cut(s)	34
Ecl136II	GAGCTC	1 cut(s)	10
Eco130I	CCWWGG	3 cut(s)	352, 1582, 1816
Eco24I	GRGCYC	2 cut(s)	12, 1787
Eco31I	GGTCTC	2 cut(s)	1478, 1510
Eco32I	GATATC	2 cut(s)	860, 1985
Eco47I	GGWCC	4 cut(s)	837, 888, 1673, 1892
Eco53kI	GAGCTC	1 cut(s)	10
Eco57I	CTGAAG	5 cut(s)	99, 734, 864, 930, 1773
Eco81I	CCTNAGG	2 cut(s)	501, 1233
Eco88I	CYCGRG	1 cut(s)	1879
Eco91I	GGTNACC	1 cut(s)	1323
EcoICRI	GAGCTC	1 cut(s)	10
EcoNI	CCTNNNNNAGG	2 cut(s)	683, 1791
EcoO109I	RGGNCCY	2 cut(s)	837, 1291
EcoO65I	GGTNACC	1 cut(s)	1323
EcoRI	GAATTC	1 cut(s)	2074
EcoRII	CCWGG	7 cut(s)	48, 366, 937, 1444, 1489, 1987, 2281
EcoRV	GATATC	2 cut(s)	860, 1985
EcoT14I	CCWWGG	3 cut(s)	352, 1582, 1816
EcoT22I	ATGCAT	4 cut(s)	791, 902, 1515, 1695
EcoT38I	GRGCYC	2 cut(s)	12, 1787
ErhI	CCWWGG	3 cut(s)	352, 1582, 1816
FalI	AAGNNNNNCTT	4 cut(s)	330, 362, 837, 869
FaqI	GGGAC	5 cut(s)	24, 82, 370, 823, 1896
FauI	CCCGC	1 cut(s)	1462
FauNDI	CATATG	2 cut(s)	1182, 1546
Fnu4HI	GCNGC	6 cut(s)	84, 1467, 1519, 1618, 1947, 2144
FokI	GGATG	5 cut(s)	17, 701, 909, 1428, 1696
FriOI	GRGCYC	2 cut(s)	12, 1787
Fsp4HI	GCNGC	6 cut(s)	84, 1467, 1519, 1618, 1947, 2144
FspBI	CTAG	6 cut(s)	920, 1137, 1817, 1824, 2121, 2262
GluI	GCNGC	6 cut(s)	84, 1467, 1519, 1618, 1947, 2144
GsaI	CCCAGC	2 cut(s)	385, 696
GsuI	CTGGAG	2 cut(s)	1887, 2010
HaeIII	GGCC	4 cut(s)	255, 351, 366, 1293
HapII	CCGG	2 cut(s)	998, 1880
HgaI	GACGC	2 cut(s)	26, 1698
Hin1I	GRCGYC	1 cut(s)	37
HincII	GTYRAC	1 cut(s)	268
HindII	GTYRAC	1 cut(s)	268
HindIII	AAGCTT	1 cut(s)	1110
HinfI	GANTC	4 cut(s)	168, 205, 823, 1399
HpaI	GTTAAC	1 cut(s)	268
HpaII	CCGG	2 cut(s)	998, 1880
HphI	GGTGA	4 cut(s)	38, 1317, 1656, 1920
Hpy166II	GTNNAC	4 cut(s)	268, 292, 808, 1060
Hpy188III	TCNNGA	6 cut(s)	389, 500, 604, 1730, 2006, 2246
Hpy8I	GTNNAC	4 cut(s)	268, 292, 808, 1060
HpyAV	CCTTC	6 cut(s)	245, 1159, 1320, 1797, 1839, 2212
HpyCH4III	ACNGT	9 cut(s)	126, 183, 289, 401, 707, 805, 915, 1064, 1859
HpyCH4IV	ACGT	1 cut(s)	479
HpyF10VI	GCNNNNNNNGC	2 cut(s)	83, 1626
HpyF3I	CTNAG	8 cut(s)	11, 144, 501, 1233, 2004, 2067, 2114, 2176
HpySE526I	ACGT	1 cut(s)	479
Hsp92I	GRCGYC	1 cut(s)	37
KspAI	GTTAAC	1 cut(s)	268
LmnI	GCTCC	4 cut(s)	941, 1810, 1880, 2204
Lsp1109I	GCAGC	6 cut(s)	70, 1453, 1530, 1629, 1933, 2155
LweI	GCATC	5 cut(s)	520, 679, 887, 1723, 2058
MabI	ACCWGGT	1 cut(s)	48
MaeI	CTAG	6 cut(s)	920, 1137, 1817, 1824, 2121, 2262
MaeII	ACGT	1 cut(s)	479
MaeIII	GTNAC	6 cut(s)	44, 827, 1201, 1323, 1354, 1919
MfeI	CAATTG	3 cut(s)	234, 644, 1158
MflI	RGATCY	3 cut(s)	274, 779, 2293
MhlI	GDGCHC	3 cut(s)	12, 1062, 1787
MlsI	TGGCCA	2 cut(s)	351, 366
MluI	ACGCGT	1 cut(s)	109
MluNI	TGGCCA	2 cut(s)	351, 366
MlyI	GAGTC	2 cut(s)	832, 1393
MmeI	TCCRAC	1 cut(s)	1919
Mox20I	TGGCCA	2 cut(s)	351, 366
Mph1103I	ATGCAT	4 cut(s)	791, 902, 1515, 1695
MroXI	GAANNNNTTC	2 cut(s)	726, 915
MscI	TGGCCA	2 cut(s)	351, 366
MslI	CAYNNNNRTG	4 cut(s)	261, 1446, 1767, 2237
Msp20I	TGGCCA	2 cut(s)	351, 366
MspCI	CTTAAG	2 cut(s)	961, 1010
MspI	CCGG	2 cut(s)	998, 1880
MunI	CAATTG	3 cut(s)	234, 644, 1158
Mva1269I	GAATGC	1 cut(s)	1047
MvaI	CCWGG	7 cut(s)	50, 368, 939, 1446, 1491, 1989, 2283
MvnI	CGCG	1 cut(s)	111
MwoI	GCNNNNNNNGC	2 cut(s)	83, 1626
NciI	CCSGG	3 cut(s)	998, 1880, 1881
NcoI	CCATGG	2 cut(s)	352, 1582
NdeI	CATATG	2 cut(s)	1182, 1546
NheI	GCTAGC	1 cut(s)	2261
NlaIV	GGNNCC	9 cut(s)	387, 839, 1292, 1365, 1539, 1876, 2095, 2215, 2295
NmuCI	GTSAC	3 cut(s)	44, 1323, 1919
NsiI	ATGCAT	4 cut(s)	791, 902, 1515, 1695
NspI	RCATGY	6 cut(s)	789, 1411, 1556, 1693, 1697, 2194
OliI	CACNNNNGTG	1 cut(s)	2237
PaeI	GCATGC	3 cut(s)	789, 1411, 1697
PagI	TCATGA	1 cut(s)	2245
PctI	GAATGC	1 cut(s)	1047
PdmI	GAANNNNTTC	2 cut(s)	726, 915
PfeI	GAWTC	2 cut(s)	168, 205
PflMI	CCANNNNNTGG	1 cut(s)	1160
PfoI	TCCNGGA	2 cut(s)	937, 1987
PkrI	GCNGC	6 cut(s)	85, 1468, 1520, 1619, 1948, 2145
PleI	GAGTC	2 cut(s)	831, 1393
PpsI	GAGTC	2 cut(s)	831, 1393
PpuMI	RGGWCCY	1 cut(s)	837
PshAI	GACNNNNGTC	1 cut(s)	638
PsiI	TTATAA	1 cut(s)	1593
Psp124BI	GAGCTC	1 cut(s)	12
Psp1406I	AACGTT	1 cut(s)	479
Psp5II	RGGWCCY	1 cut(s)	837
Psp6I	CCWGG	7 cut(s)	48, 366, 937, 1444, 1489, 1987, 2281
PspEI	GGTNACC	1 cut(s)	1323
PspFI	CCCAGC	2 cut(s)	381, 692
PspGI	CCWGG	7 cut(s)	48, 366, 937, 1444, 1489, 1987, 2281
PspN4I	GGNNCC	9 cut(s)	387, 839, 1292, 1365, 1539, 1876, 2095, 2215, 2295
PspPI	GGNCC	5 cut(s)	837, 888, 1291, 1673, 1892
PspPPI	RGGWCCY	1 cut(s)	837
PstI	CTGCAG	1 cut(s)	1951
PstNI	CAGNNNCTG	1 cut(s)	454
PsuI	RGATCY	3 cut(s)	274, 779, 2293
RsaI	GTAC	3 cut(s)	243, 1008, 1603
RsaNI	GTAC	3 cut(s)	242, 1007, 1602
RseI	CAYNNNNRTG	4 cut(s)	261, 1446, 1767, 2237
SacI	GAGCTC	1 cut(s)	12
SatI	GCNGC	6 cut(s)	84, 1467, 1519, 1618, 1947, 2144
Sau96I	GGNCC	5 cut(s)	837, 888, 1291, 1673, 1892
ScaI	AGTACT	1 cut(s)	243
SchI	GAGTC	2 cut(s)	832, 1393
SduI	GDGCHC	3 cut(s)	12, 1062, 1787
SexAI	ACCWGGT	1 cut(s)	48
SfaNI	GCATC	5 cut(s)	520, 679, 887, 1723, 2058
SfcI	CTRYAG	3 cut(s)	832, 1947, 2040
SinI	GGWCC	4 cut(s)	837, 888, 1673, 1892
SmaI	CCCGGG	1 cut(s)	1881
SmiMI	CAYNNNNRTG	4 cut(s)	261, 1446, 1767, 2237
SmlI	CTYRAG	4 cut(s)	961, 1010, 1698, 2079
SmoI	CTYRAG	4 cut(s)	961, 1010, 1698, 2079
SpeI	ACTAGT	1 cut(s)	1823
SphI	GCATGC	3 cut(s)	789, 1411, 1697
SsiI	CCGC	1 cut(s)	1469
SspI	AATATT	1 cut(s)	1486
SspMI	CTAG	6 cut(s)	920, 1137, 1817, 1824, 2121, 2262
SstI	GAGCTC	1 cut(s)	12
StyI	CCWWGG	3 cut(s)	352, 1582, 1816
TaaI	ACNGT	9 cut(s)	126, 183, 289, 401, 707, 805, 915, 1064, 1859
TaiI	ACGT	1 cut(s)	482
TaqI	TCGA	3 cut(s)	322, 799, 879
TatI	WGTACW	2 cut(s)	241, 1006
TfiI	GAWTC	2 cut(s)	168, 205
TscAI	CASTG	3 cut(s)	459, 710, 2161
TseFI	GTSAC	3 cut(s)	44, 1323, 1919
TseI	GCWGC	6 cut(s)	83, 1466, 1518, 1617, 1946, 2143
Tsp45I	GTSAC	3 cut(s)	44, 1323, 1919
TspDTI	ATGAA	4 cut(s)	264, 1146, 1199, 1700
TspGWI	ACGGA	3 cut(s)	1089, 1756, 1938
TspMI	CCCGGG	1 cut(s)	1879
TspRI	CASTG	3 cut(s)	459, 710, 2161
Van91I	CCANNNNNTGG	1 cut(s)	1160
Vha464I	CTTAAG	2 cut(s)	961, 1010
VneI	GTGCAC	1 cut(s)	1058
VpaK11BI	GGWCC	4 cut(s)	837, 888, 1673, 1892
XagI	CCTNNNNNAGG	2 cut(s)	683, 1791
XapI	RAATTY	4 cut(s)	660, 950, 1079, 2074
XceI	RCATGY	6 cut(s)	789, 1411, 1556, 1693, 1697, 2194
XcmI	CCANNNNNNNNNTGG	1 cut(s)	359
XmaI	CCCGGG	1 cut(s)	1879
XmaJI	CCTAGG	1 cut(s)	1816
XmnI	GAANNNNTTC	2 cut(s)	726, 915
XspI	CTAG	6 cut(s)	920, 1137, 1817, 1824, 2121, 2262
ZrmI	AGTACT	1 cut(s)	243
Zsp2I	ATGCAT	4 cut(s)	791, 902, 1515, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.