Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0006352

Physical Location & Seq

Genomic Coordinates Forward (+)

68562083 .. 68571049

Gene Structure 8967 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG474700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

ATGAGCTCAGCCCTACTCCTGCCTCTTCGTGGCGTCCCAGCCACCTGGTCTTTACTCCATATTCCACGCAGGCTGAAGCTGCGAGCAACAAGTCCCAACCTTTACGCGTTATCAGAAGACCGATTTTTCACTGATGCACAGTATTCTGTTATGCAGTTTGTGGCAAGATTAACTAAGGACATAGTTGAAACATACCGAATCTGCAATCCACAGTTTAAGTATTCAGAAGAACTGAATCCAAAGAGATATTTGACCAGCCCGTCAATTGGAGTACTCAATGAAGGCCACGATAATGTTAACTCGGATCTTATTCTGACAGTAAACTTTGTCTTGGTCAATTTAGACACACATCGAAGATACATCGTCAAAGATGTTCTTGGCCATGGGACATTTGGCCAGGTTGCTAAATGCTGGGTTCCAGAGACTAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCAGCATACTATCAACAGGCACTGGTTGAAGTATCCATTTTGACAACGTTAAACAAGAAATATGATCCTGAGGACAAGCATCACATTGTTCGTATTTATGATTACTTTGTATATCATCGTCATTTGTGCATTTGTTTTGAACTGCTTGATACTAATCTGTATGAGCTTATCAAGATAAATCAATTCAGGGGGCTGTCCTTGACCATTGTCCAATTGTTCTCTAAACAAATTCTACATGGGTTAGCCCTGTTAAAGGATGCTGGGATAATTCACTGTGATCTGAAGCCAGAAAACATTCTCTTATGCACAAGTGTTAAGCCAGCAGAAATTAAAATTATTGACTTTGGATCTGCATGCATGGAAGATCGAACTGTTTACTCCTACATTCAGAGTCGTTACTACAGGTCCCCTGAAGTCCTGCTTGGATATCAATATACTACTGCTATCGATATGTGGTCCTTTGGATGCATAGTTGCTGAACTGTTTCTAGGATTGCCATTATTTCCAGGAGCTTCAGAATTTGACCTCTTAAGGAGAATGATTGAAATACTTGGAGGGCAACCCCCTGATTATGTACTTAAGGAGGCAAAAAACACAAGCAAGTTCTTTAAGTGCATTCGGAGTGTGCACAGTATGGAGAACGGAGAATTTTCTGCAACTGGAAAAAGTTCTTATCAAGCTTTAACAGAGGAAGAATATGAAGCTAGAGAATTGAAAAGACCATCAATTGGGAAGGAGTATTTTAATCATATGAACCTTGAAGAAATTGTTACAAAATATCCATATCGGAAGAACTTACCTAAGGAAGATATGATTAAAGAAAGTCAGATACGATTAGCTTTGGTTGATTTTTTGAGGGGCCTTGTTGAGTTTGATCCTTCAAAACGCTGGTCACCTTTTCAGGCTTCAAAACACCCTTTTGTTACGGGGGAACCTTTTACTTGCCCTTATCAACCTCCATCAGAGACTCCTCGCATGCCTGTTGCTCAAAACATAAGGGTAGATCATCATCCTGGTGGTGGGCATTGGTTTGCTGCGGGTCTCTCTCCTAATATTCCAGGCAGAAACAGGGTCTCCATGCATAGCAGCCCACATTTTCAGGTGGTGCCGCCATATGCACATGCTAATAGCTATGGTAGTGTAGGAAGCCATGGCAGTTATAATGATGGTACTGGACTTGGAAGCAGCTATGGGAGCTATGGTGATACTGGTAATATGTTTGCTTATTATTCACCAGTTGGTCCATCTGGGATGAACATGCATGCTCAAGGCAATGCGTCAATGCTTGGAAGTAGTCCTGATGCAAGACGGAGGATTATCCCATATTCACATGGAAATGGACTTGGTATGAGCCCTTCAGCAGGAAGTTTTGCTCCTCTGCCCCTAGGCACTAGTCCTTCACAATTTACTCCACCAAGTTCCTACGGTCAAGTTTCTGCTGGCTCCCCGGGACATTATGGTCCAACTTCTCCAGCAAGAGGCAGTTGTCACGGATCACCTTTAGGAAAGATGGCTGCAGTTAGTCAGTTCAATAGAAGAAAAAGTTGGGGATATCCTGGAGGTTCTCAAACTCAGGAGAGTTCGTCTTCTCATTGGCAAGGGCAAACTACAGATGGCATCAGTTCTGGCAAAGCTGAGGGGAATTCTCAAGTAGTTGGTGGTTCCCCATCACATCTGCCTCTAAGTTCTAGTGCTGGAAGCTGGAAACAGCAGCGAGGAGGCAGTGGAAGTTCTGCTGGCTACTTAGCCACTCCAAACATGCCAAGCTCCTTCAAGGTTGGTTCCAATATCCCAAAGACCACAGGAGTGGCTCATGACAATTCGGAGGCTAGCCTGTCATTGCCTGATCCTGGGGATTGGGATCCCAATTATAGCGATGAACTTCTTCTGCAAGAAGATGGTTCGGATACAAGCTGCTTTACTACTGAGTTCAGCAATGGCATGCATCTTAATTCCGCAGAAACATTGGGTGGGGTTGGAAGATTCAGCAGCATGTCAAGTACAAGCTCCGGTCTTTCCTTACACAGACAAAGTGGCCCAATGCAATCATTCTCACATGCAGAGGTGGGTAGCCCTCCAACTGGTGAACCACTTGCTGGATATGTGCGTTTGTCAAAACCTTCTCATTTCATGCCTCATATATCTCAAAATTCTCCTAGCCGTTTGGGCCAGCAATCTCAGCGGTTCAATCACGGAAGACCGAGCAATTCTCGGGGTAATGATTGGAATCATATGAAGGTGCAGCCCCCTCCTCCCAATTTTAACTCTGGAGGCCCACATTCTCCAGGAAATAGCTCATTCAGCAACGGCATGTCATGGGGGCGTAGAGCCAGTCATCCGGTCATTAGCGTTCCACCTGCATCACGTGGAAGAAAGGACTATGGACGAATTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009267 GO:0009605 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0009991 GO:0010033 GO:0010468 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0019932 GO:0019933 GO:0019935 GO:0023052 GO:0030587 GO:0031152 GO:0031667 GO:0031668 GO:0031669 GO:0032502 GO:0033554 GO:0035556 GO:0036211 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042594 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044764 GO:0045472 GO:0046677 GO:0048518 GO:0048519 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051409 GO:0051703 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0071496 GO:0071704 GO:0090702 GO:0097327 GO:0098630 GO:0098743 GO:0099120 GO:0140096 GO:1901564 GO:1901654 GO:1901700 GO:1904643

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

952

Amino Acids

104.59

Weight (kDa)

8.78

Isoelectric Point (pI)

54.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	120 - 462	1.9e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	123 - 334	2.8e-21	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0006352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35980 AT5G35980 AT5G35980
fragaria_vesca	FvH4_7g34270 FvH4_7g34270 FvH4_7g34270 FvH4_7g34270
malus_domestica	MD01G1239700.v1.1 MD07G1311600.v1.1
prunus_persica	Prupe.2G329600_v2.0.a1 Prupe.2G329600_v2.0.a1
pyrus_communis	pycom07g28380
rosa_chinensis	RchiOBHm_Chr1g0384621
rosa_laevigata	RLG00000026026
rosa_multiflora	Rmu_co8382885.1_g000001 Rmu_sc0012136.1_g000028
rosa_roxburghii	Rroxscaffold_1G00045450
rosa_rugosa	Rorug01G0450200
rosa_samantha	Rh1AG474700 Rh1BG432800 Rh1CG446000 Rh1DG465400 Rh2AG390000 Rh3CG154800 Rh3DG155900 Rh4CG245100
rosa_wichuraiana	Rw1G039790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1623
AarI	CACCTGC	1 cut(s)	2827
AasI	GACNNNNNNGTC	2 cut(s)	259, 1920
Acc36I	ACCTGC	1 cut(s)	2827
AccB1I	GGYRCC	1 cut(s)	1567
AccB7I	CCANNNNNTGG	2 cut(s)	1190, 2558
AccII	CGCG	1 cut(s)	107
AciI	CCGC	4 cut(s)	1499, 1571, 2418, 2644
AclI	AACGTT	1 cut(s)	509
AclWI	GGATC	8 cut(s)	312, 521, 817, 1331, 1963, 2303, 2318, 2331
AcoI	YGGCCR	2 cut(s)	379, 394
AcsI	RAATTY	5 cut(s)	690, 980, 1109, 2104, 2611
AcuI	CTGAAG	5 cut(s)	95, 764, 894, 960, 1803
AcvI	CACGTG	1 cut(s)	2828
AcyI	GRCGYC	1 cut(s)	33
AfaI	GTAC	4 cut(s)	273, 1038, 1633, 2464
AflII	CTTAAG	2 cut(s)	991, 1040
AflIII	ACRYGT	1 cut(s)	105
AhlI	ACTAGT	1 cut(s)	1853
AjnI	CCWGG	8 cut(s)	44, 396, 967, 1474, 1519, 2017, 2311, 2746
AjuI	GAANNNNNNNTTGG	4 cut(s)	867, 899, 1990, 2022
AleI	CACNNNNGTG	1 cut(s)	2267
Alw21I	GWGCWC	2 cut(s)	8, 1092
Alw26I	GTCTC	4 cut(s)	416, 1421, 1508, 1540
Alw44I	GTGCAC	1 cut(s)	1088
AlwI	GGATC	8 cut(s)	312, 521, 817, 1331, 1963, 2303, 2318, 2331
AlwNI	CAGNNNCTG	1 cut(s)	484
Ama87I	CYCGRG	2 cut(s)	1909, 2673
AoxI	GGCC	7 cut(s)	283, 379, 394, 1321, 2497, 2629, 2734
ApaLI	GTGCAC	1 cut(s)	1088
ApeKI	GCWGC	9 cut(s)	79, 1496, 1548, 1647, 1976, 2173, 2376, 2451, 2704
ApoI	RAATTY	5 cut(s)	690, 980, 1109, 2104, 2611
ArsI	GACNNNNNNTTYG	2 cut(s)	1337, 1369
Asp700I	GAANNNNTTC	4 cut(s)	756, 945, 1129, 2346
AspA2I	CCTAGG	1 cut(s)	1846
AspS9I	GGNCC	8 cut(s)	867, 918, 1321, 1703, 1922, 2498, 2629, 2735
AsuC2I	CCSGG	2 cut(s)	1910, 1911
AsuHPI	GGTGA	5 cut(s)	1347, 1676, 1686, 1950, 2558
AsuNHI	GCTAGC	1 cut(s)	2291
AvaI	CYCGRG	2 cut(s)	1909, 2673
AvaII	GGWCC	4 cut(s)	867, 918, 1703, 1922
AvrII	CCTAGG	1 cut(s)	1846
AxyI	CCTNAGG	2 cut(s)	531, 1263
BaeGI	GKGCMC	1 cut(s)	1092
BalI	TGGCCA	2 cut(s)	381, 396
BamHI	GGATCC	1 cut(s)	2323
BanI	GGYRCC	1 cut(s)	1567
BanII	GRGCYC	2 cut(s)	8, 1817
BarI	GAAGNNNNNNTAC	2 cut(s)	1801, 1833
BbrPI	CACGTG	1 cut(s)	2828
BbsI	GAAGAC	3 cut(s)	123, 2040, 2665
Bbv12I	GWGCWC	2 cut(s)	8, 1092
BbvCI	CCTCAGC	1 cut(s)	2097
BbvI	GCAGC	9 cut(s)	66, 1483, 1560, 1659, 1963, 2185, 2363, 2463, 2716
BccI	CCATC	8 cut(s)	1192, 1429, 1622, 1714, 1966, 2069, 2137, 2354
BceAI	ACGGC	2 cut(s)	2607, 2785
BciT130I	CCWGG	8 cut(s)	46, 398, 969, 1476, 1521, 2019, 2313, 2748
BciVI	GTATCC	2 cut(s)	505, 2362
BcnI	CCSGG	2 cut(s)	1910, 1911
BcoDI	GTCTC	4 cut(s)	416, 1421, 1508, 1540
BcuI	ACTAGT	1 cut(s)	1853
BfaI	CTAG	7 cut(s)	950, 1167, 1847, 1854, 2151, 2292, 2619
BfmI	CTRYAG	3 cut(s)	862, 1977, 2070
BfrI	CTTAAG	2 cut(s)	991, 1040
BfuAI	ACCTGC	1 cut(s)	2827
BfuI	GTATCC	2 cut(s)	505, 2362
BglI	GCCNNNNNGGC	1 cut(s)	2628
BlnI	CCTAGG	1 cut(s)	1846
BlpI	GCTNAGC	1 cut(s)	7
BmcAI	AGTACT	1 cut(s)	273
Bme18I	GGWCC	4 cut(s)	867, 918, 1703, 1922
BmeT110I	CYCGRG	2 cut(s)	1909, 2673
BmgT120I	GGNCC	8 cut(s)	867, 918, 1321, 1703, 1922, 2498, 2629, 2735
BmiI	GGNNCC	9 cut(s)	417, 869, 1322, 1395, 1569, 1906, 2125, 2245, 2325
BmsI	GCATC	8 cut(s)	124, 550, 709, 917, 1753, 2088, 2416, 2831
BmtI	GCTAGC	1 cut(s)	2295
BoxI	GACNNNNGTC	1 cut(s)	668
BpiI	GAAGAC	3 cut(s)	123, 2040, 2665
BplI	GAGNNNNNCTC	2 cut(s)	2656, 2688
BpmI	CTGGAG	4 cut(s)	1917, 2040, 2730, 2751
Bpu10I	CCTNAGC	1 cut(s)	2097
Bpu1102I	GCTNAGC	1 cut(s)	7
BpuEI	CTTGAG	2 cut(s)	1713, 2094
BpuMI	CCSGG	2 cut(s)	1910, 1911
Bsa29I	ATCGAT	1 cut(s)	909
BsaAI	YACGTR	1 cut(s)	2828
BsaBI	GATNNNNATC	4 cut(s)	615, 1470, 2322, 2688
BsaHI	GRCGYC	1 cut(s)	33
BsaI	GGTCTC	2 cut(s)	1508, 1540
BsaJI	CCNNGG	6 cut(s)	382, 1612, 1846, 1908, 1909, 2312
BsaWI	WCCGGW	2 cut(s)	2471, 2800
BsaXI	ACNNNNNCTCC	6 cut(s)	1520, 1550, 1648, 1678, 2030, 2060
Bse1I	ACTGG	7 cut(s)	489, 1126, 1639, 1675, 1697, 2548, 2793
Bse21I	CCTNAGG	2 cut(s)	531, 1263
Bse3DI	GCAATG	3 cut(s)	1741, 2300, 2404
Bse8I	GATNNNNATC	4 cut(s)	615, 1470, 2322, 2688
BseBI	CCWGG	8 cut(s)	46, 398, 969, 1476, 1521, 2019, 2313, 2748
BseCI	ATCGAT	1 cut(s)	909
BseDI	CCNNGG	6 cut(s)	382, 1612, 1846, 1908, 1909, 2312
BseGI	GGATG	5 cut(s)	724, 932, 1471, 1719, 2797
BseJI	GATNNNNATC	4 cut(s)	615, 1470, 2322, 2688
BseMI	GCAATG	3 cut(s)	1741, 2300, 2404
BseMII	CTCAG	6 cut(s)	21, 522, 2048, 2088, 2379, 2654
BseNI	ACTGG	7 cut(s)	489, 1126, 1639, 1675, 1697, 2548, 2793
BseRI	GAGGAG	4 cut(s)	1422, 1827, 2193, 2703
BseSI	GKGCMC	1 cut(s)	1092
BseXI	GCAGC	9 cut(s)	66, 1483, 1560, 1659, 1963, 2185, 2363, 2463, 2716
BseYI	CCCAGC	3 cut(s)	37, 411, 722
BsgI	GTGCAG	1 cut(s)	2723
Bsh1236I	CGCG	1 cut(s)	107
BshFI	GGCC	7 cut(s)	285, 381, 396, 1323, 2499, 2631, 2736
BshNI	GGYRCC	1 cut(s)	1567
BshVI	ATCGAT	1 cut(s)	909
BsiHKAI	GWGCWC	2 cut(s)	8, 1092
BsiHKCI	CYCGRG	2 cut(s)	1909, 2673
BsiSI	CCGG	3 cut(s)	1910, 2472, 2801
BslFI	GGGAC	5 cut(s)	20, 78, 400, 853, 1926
BsmAI	GTCTC	4 cut(s)	416, 1421, 1508, 1540
BsmFI	GGGAC	5 cut(s)	20, 78, 400, 853, 1926
BsmI	GAATGC	1 cut(s)	1077
BsnI	GGCC	7 cut(s)	285, 381, 396, 1323, 2499, 2631, 2736
Bso31I	GGTCTC	2 cut(s)	1508, 1540
BsoBI	CYCGRG	2 cut(s)	1909, 2673
Bsp1286I	GDGCHC	3 cut(s)	8, 1092, 1817
Bsp1720I	GCTNAGC	1 cut(s)	7
Bsp19I	CCATGG	2 cut(s)	382, 1612
BspACI	CCGC	4 cut(s)	1499, 1571, 2418, 2644
BspANI	GGCC	7 cut(s)	285, 381, 396, 1323, 2499, 2631, 2736
BspCNI	CTCAG	6 cut(s)	20, 523, 2047, 2089, 2380, 2653
BspDI	ATCGAT	1 cut(s)	909
BspFNI	CGCG	1 cut(s)	107
BspHI	TCATGA	1 cut(s)	2275
BspLI	GGNNCC	9 cut(s)	417, 869, 1322, 1395, 1569, 1906, 2125, 2245, 2325
BspMAI	CTGCAG	1 cut(s)	1981
BspMI	ACCTGC	1 cut(s)	2827
BspOI	GCTAGC	1 cut(s)	2295
BspPI	GGATC	8 cut(s)	312, 521, 817, 1331, 1963, 2303, 2318, 2331
BspT107I	GGYRCC	1 cut(s)	1567
BspTI	CTTAAG	2 cut(s)	991, 1040
BspTNI	GGTCTC	2 cut(s)	1508, 1540
BsrDI	GCAATG	3 cut(s)	1741, 2300, 2404
BsrI	ACTGG	7 cut(s)	489, 1126, 1639, 1675, 1697, 2548, 2793
BssECI	CCNNGG	6 cut(s)	382, 1612, 1846, 1908, 1909, 2312
BssNI	GRCGYC	1 cut(s)	33
BssT1I	CCWWGG	3 cut(s)	382, 1612, 1846
Bst2UI	CCWGG	8 cut(s)	46, 398, 969, 1476, 1521, 2019, 2313, 2748
Bst4CI	ACNGT	9 cut(s)	141, 213, 319, 431, 737, 835, 945, 1094, 1889
Bst6I	CTCTTC	1 cut(s)	30
BstACI	GRCGYC	1 cut(s)	33
BstAFI	CTTAAG	2 cut(s)	991, 1040
BstBAI	YACGTR	1 cut(s)	2828
BstDSI	CCRYGG	2 cut(s)	382, 1612
BstEII	GGTNACC	1 cut(s)	1353
BstENI	CCTNNNNNAGG	2 cut(s)	713, 1821
BstF5I	GGATG	5 cut(s)	724, 932, 1471, 1719, 2797
BstFNI	CGCG	1 cut(s)	107
BstMAI	GTCTC	4 cut(s)	416, 1421, 1508, 1540
BstMWI	GCNNNNNNNGC	5 cut(s)	79, 1656, 2628, 2641, 2763
BstNI	CCWGG	8 cut(s)	46, 398, 969, 1476, 1521, 2019, 2313, 2748
BstPAI	GACNNNNGTC	1 cut(s)	668
BstPI	GGTNACC	1 cut(s)	1353
BstSFI	CTRYAG	3 cut(s)	862, 1977, 2070
BstSLI	GKGCMC	1 cut(s)	1092
BstUI	CGCG	1 cut(s)	107
BstV1I	GCAGC	9 cut(s)	66, 1483, 1560, 1659, 1963, 2185, 2363, 2463, 2716
BstV2I	GAAGAC	3 cut(s)	123, 2040, 2665
BstX2I	RGATCY	3 cut(s)	304, 809, 2323
BstXI	CCANNNNNNTGG	2 cut(s)	45, 2269
BstYI	RGATCY	3 cut(s)	304, 809, 2323
Bsu15I	ATCGAT	1 cut(s)	909
Bsu36I	CCTNAGG	2 cut(s)	531, 1263
BsuI	GTATCC	2 cut(s)	505, 2362
BsuRI	GGCC	7 cut(s)	285, 381, 396, 1323, 2499, 2631, 2736
BsuTUI	ATCGAT	1 cut(s)	909
BtgI	CCRYGG	2 cut(s)	382, 1612
BtgZI	GCGATG	1 cut(s)	2352
BtsCI	GGATG	5 cut(s)	724, 932, 1471, 1719, 2797
BtsI	GCAGTG	1 cut(s)	2191
BtsIMutI	CAGTG	4 cut(s)	129, 482, 733, 2191
BveI	ACCTGC	1 cut(s)	2827
CaiI	CAGNNNCTG	1 cut(s)	484
CciI	TCATGA	1 cut(s)	2275
Cfr13I	GGNCC	8 cut(s)	867, 918, 1321, 1703, 1922, 2498, 2629, 2735
Cfr9I	CCCGGG	1 cut(s)	1909
ClaI	ATCGAT	1 cut(s)	909
CseI	GACGC	2 cut(s)	22, 1728
CsiI	ACCWGGT	1 cut(s)	44
Csp6I	GTAC	4 cut(s)	272, 1037, 1632, 2463
CviQI	GTAC	4 cut(s)	272, 1037, 1632, 2463
DrdI	GACNNNNNNGTC	2 cut(s)	259, 1920
DseDI	GACNNNNNNGTC	2 cut(s)	259, 1920
EaeI	YGGCCR	2 cut(s)	379, 394
Eam1104I	CTCTTC	1 cut(s)	30
EarI	CTCTTC	1 cut(s)	30
Ecl136II	GAGCTC	1 cut(s)	6
Eco130I	CCWWGG	3 cut(s)	382, 1612, 1846
Eco24I	GRGCYC	2 cut(s)	8, 1817
Eco31I	GGTCTC	2 cut(s)	1508, 1540
Eco32I	GATATC	2 cut(s)	890, 2015
Eco47I	GGWCC	4 cut(s)	867, 918, 1703, 1922
Eco53kI	GAGCTC	1 cut(s)	6
Eco57I	CTGAAG	5 cut(s)	95, 764, 894, 960, 1803
Eco72I	CACGTG	1 cut(s)	2828
Eco81I	CCTNAGG	2 cut(s)	531, 1263
Eco88I	CYCGRG	2 cut(s)	1909, 2673
Eco91I	GGTNACC	1 cut(s)	1353
EcoICRI	GAGCTC	1 cut(s)	6
EcoNI	CCTNNNNNAGG	2 cut(s)	713, 1821
EcoO109I	RGGNCCY	2 cut(s)	867, 1321
EcoO65I	GGTNACC	1 cut(s)	1353
EcoRI	GAATTC	1 cut(s)	2104
EcoRII	CCWGG	8 cut(s)	44, 396, 967, 1474, 1519, 2017, 2311, 2746
EcoRV	GATATC	2 cut(s)	890, 2015
EcoT14I	CCWWGG	3 cut(s)	382, 1612, 1846
EcoT22I	ATGCAT	5 cut(s)	821, 932, 1545, 1725, 2409
EcoT38I	GRGCYC	2 cut(s)	8, 1817
ErhI	CCWWGG	3 cut(s)	382, 1612, 1846
FalI	AAGNNNNNCTT	4 cut(s)	360, 392, 867, 899
FaqI	GGGAC	5 cut(s)	20, 78, 400, 853, 1926
FauI	CCCGC	1 cut(s)	1492
FauNDI	CATATG	3 cut(s)	1212, 1576, 2694
FokI	GGATG	5 cut(s)	731, 939, 1458, 1726, 2784
FriOI	GRGCYC	2 cut(s)	8, 1817
FspBI	CTAG	7 cut(s)	950, 1167, 1847, 1854, 2151, 2292, 2619
GsaI	CCCAGC	3 cut(s)	41, 415, 726
GsuI	CTGGAG	4 cut(s)	1917, 2040, 2730, 2751
HaeIII	GGCC	7 cut(s)	285, 381, 396, 1323, 2499, 2631, 2736
HapII	CCGG	3 cut(s)	1910, 2472, 2801
HgaI	GACGC	2 cut(s)	22, 1728
Hin1I	GRCGYC	1 cut(s)	33
HincII	GTYRAC	1 cut(s)	298
HindII	GTYRAC	1 cut(s)	298
HindIII	AAGCTT	1 cut(s)	1140
HinfI	GANTC	6 cut(s)	198, 235, 853, 1429, 2445, 2689
HpaI	GTTAAC	1 cut(s)	298
HpaII	CCGG	3 cut(s)	1910, 2472, 2801
HphI	GGTGA	5 cut(s)	1347, 1676, 1686, 1950, 2558
Hpy166II	GTNNAC	5 cut(s)	298, 322, 838, 1090, 2549
Hpy188III	TCNNGA	7 cut(s)	419, 530, 634, 1760, 2036, 2276, 2730
Hpy8I	GTNNAC	5 cut(s)	298, 322, 838, 1090, 2549
HpyAV	CCTTC	8 cut(s)	275, 1189, 1350, 1827, 1869, 2242, 2592, 2692
HpyCH4III	ACNGT	9 cut(s)	141, 213, 319, 431, 737, 835, 945, 1094, 1889
HpyCH4IV	ACGT	2 cut(s)	509, 2827
HpyF10VI	GCNNNNNNNGC	5 cut(s)	79, 1656, 2628, 2641, 2763
HpySE526I	ACGT	2 cut(s)	509, 2827
Hsp92I	GRCGYC	1 cut(s)	33
KspAI	GTTAAC	1 cut(s)	298
LmnI	GCTCC	6 cut(s)	971, 1656, 1840, 1910, 2234, 2474
Lsp1109I	GCAGC	9 cut(s)	66, 1483, 1560, 1659, 1963, 2185, 2363, 2463, 2716
LweI	GCATC	8 cut(s)	124, 550, 709, 917, 1753, 2088, 2416, 2831
MabI	ACCWGGT	1 cut(s)	44
MaeI	CTAG	7 cut(s)	950, 1167, 1847, 1854, 2151, 2292, 2619
MaeII	ACGT	2 cut(s)	509, 2827
MaeIII	GTNAC	5 cut(s)	857, 1231, 1353, 1384, 1949
MfeI	CAATTG	3 cut(s)	264, 674, 1188
MflI	RGATCY	3 cut(s)	304, 809, 2323
MhlI	GDGCHC	3 cut(s)	8, 1092, 1817
MlsI	TGGCCA	2 cut(s)	381, 396
MluI	ACGCGT	1 cut(s)	105
MluNI	TGGCCA	2 cut(s)	381, 396
MlyI	GAGTC	2 cut(s)	862, 1423
MmeI	TCCRAC	3 cut(s)	1949, 2419, 2564
Mox20I	TGGCCA	2 cut(s)	381, 396
Mph1103I	ATGCAT	5 cut(s)	821, 932, 1545, 1725, 2409
MroXI	GAANNNNTTC	4 cut(s)	756, 945, 1129, 2346
MscI	TGGCCA	2 cut(s)	381, 396
MslI	CAYNNNNRTG	4 cut(s)	291, 1476, 1797, 2267
Msp20I	TGGCCA	2 cut(s)	381, 396
MspA1I	CMGCKG	1 cut(s)	2644
MspCI	CTTAAG	2 cut(s)	991, 1040
MspI	CCGG	3 cut(s)	1910, 2472, 2801
MunI	CAATTG	3 cut(s)	264, 674, 1188
Mva1269I	GAATGC	1 cut(s)	1077
MvaI	CCWGG	8 cut(s)	46, 398, 969, 1476, 1521, 2019, 2313, 2748
MvnI	CGCG	1 cut(s)	107
MwoI	GCNNNNNNNGC	5 cut(s)	79, 1656, 2628, 2641, 2763
NciI	CCSGG	2 cut(s)	1910, 1911
NcoI	CCATGG	2 cut(s)	382, 1612
NdeI	CATATG	3 cut(s)	1212, 1576, 2694
NheI	GCTAGC	1 cut(s)	2291
NlaIV	GGNNCC	9 cut(s)	417, 869, 1322, 1395, 1569, 1906, 2125, 2245, 2325
NmuCI	GTSAC	2 cut(s)	1353, 1949
NsiI	ATGCAT	5 cut(s)	821, 932, 1545, 1725, 2409
OliI	CACNNNNGTG	1 cut(s)	2267
PaeI	GCATGC	4 cut(s)	819, 1441, 1727, 2407
PagI	TCATGA	1 cut(s)	2275
PaqCI	CACCTGC	1 cut(s)	2827
PctI	GAATGC	1 cut(s)	1077
PdmI	GAANNNNTTC	4 cut(s)	756, 945, 1129, 2346
PfeI	GAWTC	4 cut(s)	198, 235, 2445, 2689
PflMI	CCANNNNNTGG	2 cut(s)	1190, 2558
PfoI	TCCNGGA	3 cut(s)	967, 2017, 2746
PleI	GAGTC	2 cut(s)	861, 1423
PmaCI	CACGTG	1 cut(s)	2828
PmlI	CACGTG	1 cut(s)	2828
PpsI	GAGTC	2 cut(s)	861, 1423
Ppu21I	YACGTR	1 cut(s)	2828
PpuMI	RGGWCCY	1 cut(s)	867
PshAI	GACNNNNGTC	1 cut(s)	668
PsiI	TTATAA	1 cut(s)	1623
Psp124BI	GAGCTC	1 cut(s)	8
Psp1406I	AACGTT	1 cut(s)	509
Psp5II	RGGWCCY	1 cut(s)	867
Psp6I	CCWGG	8 cut(s)	44, 396, 967, 1474, 1519, 2017, 2311, 2746
PspCI	CACGTG	1 cut(s)	2828
PspEI	GGTNACC	1 cut(s)	1353
PspFI	CCCAGC	3 cut(s)	37, 411, 722
PspGI	CCWGG	8 cut(s)	44, 396, 967, 1474, 1519, 2017, 2311, 2746
PspN4I	GGNNCC	9 cut(s)	417, 869, 1322, 1395, 1569, 1906, 2125, 2245, 2325
PspPI	GGNCC	8 cut(s)	867, 918, 1321, 1703, 1922, 2498, 2629, 2735
PspPPI	RGGWCCY	1 cut(s)	867
PstI	CTGCAG	1 cut(s)	1981
PstNI	CAGNNNCTG	1 cut(s)	484
PsuI	RGATCY	3 cut(s)	304, 809, 2323
RsaI	GTAC	4 cut(s)	273, 1038, 1633, 2464
RsaNI	GTAC	4 cut(s)	272, 1037, 1632, 2463
RseI	CAYNNNNRTG	4 cut(s)	291, 1476, 1797, 2267
SacI	GAGCTC	1 cut(s)	8
Sau96I	GGNCC	8 cut(s)	867, 918, 1321, 1703, 1922, 2498, 2629, 2735
ScaI	AGTACT	1 cut(s)	273
SchI	GAGTC	2 cut(s)	862, 1423
SduI	GDGCHC	3 cut(s)	8, 1092, 1817
SexAI	ACCWGGT	1 cut(s)	44
SfaNI	GCATC	8 cut(s)	124, 550, 709, 917, 1753, 2088, 2416, 2831
SfcI	CTRYAG	3 cut(s)	862, 1977, 2070
SinI	GGWCC	4 cut(s)	867, 918, 1703, 1922
SmaI	CCCGGG	1 cut(s)	1911
SmiMI	CAYNNNNRTG	4 cut(s)	291, 1476, 1797, 2267
SmlI	CTYRAG	4 cut(s)	991, 1040, 1728, 2109
SmoI	CTYRAG	4 cut(s)	991, 1040, 1728, 2109
SpeI	ACTAGT	1 cut(s)	1853
SphI	GCATGC	4 cut(s)	819, 1441, 1727, 2407
SsiI	CCGC	4 cut(s)	1499, 1571, 2418, 2644
SspI	AATATT	1 cut(s)	1516
SspMI	CTAG	7 cut(s)	950, 1167, 1847, 1854, 2151, 2292, 2619
SstI	GAGCTC	1 cut(s)	8
StyI	CCWWGG	3 cut(s)	382, 1612, 1846
TaaI	ACNGT	9 cut(s)	141, 213, 319, 431, 737, 835, 945, 1094, 1889
TaiI	ACGT	2 cut(s)	512, 2830
TaqI	TCGA	3 cut(s)	352, 829, 909
TaqII	GACCGA	2 cut(s)	135, 2677
TatI	WGTACW	3 cut(s)	271, 1036, 2462
TauI	GCSGC	1 cut(s)	1573
TfiI	GAWTC	4 cut(s)	198, 235, 2445, 2689
TscAI	CASTG	4 cut(s)	136, 489, 740, 2191
TseFI	GTSAC	2 cut(s)	1353, 1949
TseI	GCWGC	9 cut(s)	79, 1496, 1548, 1647, 1976, 2173, 2376, 2451, 2704
Tsp45I	GTSAC	2 cut(s)	1353, 1949
TspDTI	ATGAA	7 cut(s)	294, 1176, 1229, 1730, 2355, 2581, 2711
TspGWI	ACGGA	4 cut(s)	1119, 1786, 1968, 2670
TspMI	CCCGGG	1 cut(s)	1909
TspRI	CASTG	4 cut(s)	136, 489, 740, 2191
Van91I	CCANNNNNTGG	2 cut(s)	1190, 2558
Vha464I	CTTAAG	2 cut(s)	991, 1040
VneI	GTGCAC	1 cut(s)	1088
VpaK11BI	GGWCC	4 cut(s)	867, 918, 1703, 1922
XagI	CCTNNNNNAGG	2 cut(s)	713, 1821
XapI	RAATTY	5 cut(s)	690, 980, 1109, 2104, 2611
XcmI	CCANNNNNNNNNTGG	1 cut(s)	389
XmaI	CCCGGG	1 cut(s)	1909
XmaJI	CCTAGG	1 cut(s)	1846
XmnI	GAANNNNTTC	4 cut(s)	756, 945, 1129, 2346
XspI	CTAG	7 cut(s)	950, 1167, 1847, 1854, 2151, 2292, 2619
ZrmI	AGTACT	1 cut(s)	273
Zsp2I	ATGCAT	5 cut(s)	821, 932, 1545, 1725, 2409

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.