pycom08g05110

GATA transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0013620
Physical Location & Seq
Reverse (-)
3924835 .. 3926533
1699 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g05110.2

Sequence Viewer

Length: 1068 bp
ATGATGACTCCAGTCTATCTGAACCCACCATCCTCTCCTTTCTCCCATGTCGAGCAAGCAAATGATCAGGATCAACGCCTGAAACTTTTTATATCATCATCATATACTAATCAAGCTGCAGCTTCATCATGTTCTTCTCTGATCTCATCATTTCCTACTTTCTTCGACTCCTTTGAAGATCAAAGAGCTGGGAGTTCTAGCACCACTACTACTACCACTACTCTTGGTCATGGTCAATCACTATTATACCATCACAAGGTTGATAAGCACATACGGGATTGTGGAACAAGTATTTATGATCAAGCATCCTCGTCATCTTCTTTAGTTCAGCCTCATGTGGTGGACGTTATAAGCAACAAGGACCATAGATTGATGTCGGCATATGCTGATCATGAAAGGGAGATCAATGGTAGAGGAGGAGAAGAGGAGGGTAAAAGTAATAATAATATTAGGCCAAGGGCAGTAAAATGGATGTCCTCCAAGATGAGGTTGATGGAAAAGATGACCAACCCGGATCTCGGGCCGGCCGGTACCACTGGAAATCATATACCTGCAGCCGCGGAGATAGCTGAACATAAATTCCGAGTTGTTCAGTATCAAGAAAACAGTGATGAAACCAGCTTTTCCAGAAATAGCAACAAAACTACTCCAGCTGTTAGGGTTTGTTCTGACTGTAACACAAGCACAACGCCACTTTGGAGGAGCGGTCCTCGCGGCCCCAAGTCGCTGTGCAATGCATGTGGAATCCGACAGAGGAAAGCGAGAAGAGCCATGGCAGAGGCTGCGGCGGCTGCTGCAAATGGGTTTGTAGTCGGCGCCACTGACACTTCATCTGCCAAGGGTAAGGTGGCCAACAAGGAGAAGAAACCGCGGGGAAGCCATAGCAAGAACAAGAGCAAGCTCATCGTCACCGACACTCCATCAGTATCTCCCAACAACAAAATTAATAGTAATAATAATAAGATTTGTTTCAAAGGTTTGGGTTTTCAACGAGTGTTTCCTCAGGATGTTGCTGAAGCTGCAATCCTCCTTATGGAGCTGTCTTGTGGCCTAATTAATCACTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001101 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009910 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010035 GO:0010114 GO:0010151 GO:0010167 GO:0010187 GO:0010380 GO:0010467 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010648 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032774 GO:0032870 GO:0032991 GO:0033993 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043610 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048731 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051173 GO:0051193 GO:0051194 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071368 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0071840 GO:0080050 GO:0080090 GO:0090056 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0099402 GO:0140110 GO:1900140 GO:1901360 GO:1901362 GO:1901363 GO:1901401 GO:1901403 GO:1901463 GO:1901465 GO:1901576 GO:1901698 GO:1901700 GO:1901701 GO:1902326 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GATA

Protein Analysis

356

Amino Acids

38.6

Weight (kDa)

9.29

Isoelectric Point (pI)

46.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013620)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g31930
malus_domestica MD08G1061600.v1.1 MD15G1060100.v1.1
prunus_persica Prupe.1G412000_v2.0.a1
pyrus_communis pycom08g05110 pycom15g05640
rosa_chinensis RchiOBHm_Chr6g0310911
rosa_laevigata RLG00000010451
rosa_multiflora Rmu_co8401939.1_g000001
rosa_roxburghii Rroxscaffold_7G00158190
rosa_rugosa Rorug06G0383900
rosa_samantha Rh6AG497800 Rh6BG507900 Rh6BG508000 Rh6CG514000 Rh6CG514100 Rh6DG500500
rosa_wichuraiana Rw6G043360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 350
Acc36I ACCTGC 1 cut(s) 559
Acc65I GGTACC 1 cut(s) 530
AccB1I GGYRCC 2 cut(s) 530, 815
AccBSI CCGCTC 1 cut(s) 705
AccII CGCG 3 cut(s) 560, 714, 871
AciI CCGC 8 cut(s) 558, 560, 705, 714, 785, 788, 869, 871
AclWI GGATC 2 cut(s) 78, 522
AcoI YGGCCR 2 cut(s) 525, 849
AcsI RAATTY 1 cut(s) 578
AcuI CTGAAG 1 cut(s) 1035
AcyI GRCGYC 1 cut(s) 816
AfaI GTAC 1 cut(s) 532
AfiI CCNNNNNNNGG 4 cut(s) 256, 486, 518, 1033
AgsI TTSAA 3 cut(s) 176, 973, 989
AloI GAACNNNNNNTCC 4 cut(s) 14, 46, 564, 596
AluBI AGCT 9 cut(s) 116, 122, 188, 569, 621, 653, 901, 1019, 1039
AluI AGCT 9 cut(s) 116, 122, 188, 569, 621, 653, 901, 1019, 1039
AlwI GGATC 2 cut(s) 78, 522
AlwNI CAGNNNCTG 1 cut(s) 782
Ama87I CYCGRG 1 cut(s) 518
AoxI GGCC 6 cut(s) 452, 521, 525, 715, 849, 1048
ApeKI GCWGC 7 cut(s) 116, 119, 554, 782, 791, 794, 1019
ApoI RAATTY 1 cut(s) 578
AseI ATTAAT 2 cut(s) 945, 1056
Asp718I GGTACC 1 cut(s) 530
AspLEI GCGC 1 cut(s) 818
AspS9I GGNCC 4 cut(s) 361, 521, 707, 716
AsuC2I CCSGG 1 cut(s) 512
AsuHPI GGTGA 1 cut(s) 901
AvaI CYCGRG 1 cut(s) 518
AvaII GGWCC 2 cut(s) 361, 707
AxyI CCTNAGG 1 cut(s) 1002
BalI TGGCCA 1 cut(s) 851
BanI GGYRCC 2 cut(s) 530, 815
BbvI GCAGC 7 cut(s) 103, 131, 566, 769, 778, 781, 1006
BccI CCATC 4 cut(s) 37, 258, 487, 928
BcgI CGANNNNNNTGC 2 cut(s) 886, 920
BclI TGATCA 3 cut(s) 64, 298, 388
BcnI CCSGG 1 cut(s) 512
BfaI CTAG 1 cut(s) 198
BfmI CTRYAG 2 cut(s) 117, 552
BfoI RGCGCY 1 cut(s) 819
BfuAI ACCTGC 1 cut(s) 559
Bme1390I CCNGG 1 cut(s) 512
Bme18I GGWCC 2 cut(s) 361, 707
BmeT110I CYCGRG 1 cut(s) 518
BmgT120I GGNCC 4 cut(s) 361, 521, 707, 716
BmiI GGNNCC 3 cut(s) 532, 718, 817
BmrFI CCNGG 1 cut(s) 512
BmsI GCATC 1 cut(s) 314
BoxI GACNNNNGTC 1 cut(s) 11
BplI GAGNNNNNCTC 2 cut(s) 694, 726
BpmI CTGGAG 1 cut(s) 633
BpuMI CCSGG 1 cut(s) 512
BsaBI GATNNNNATC 1 cut(s) 69
BsaHI GRCGYC 1 cut(s) 816
BsaJI CCNNGG 5 cut(s) 455, 558, 771, 837, 869
BsaXI ACNNNNNCTCC 4 cut(s) 691, 721, 901, 931
Bsc4I CCNNNNNNNGG 4 cut(s) 256, 486, 518, 1033
Bse118I RCCGGY 2 cut(s) 523, 527
Bse1I ACTGG 2 cut(s) 11, 541
Bse21I CCTNAGG 1 cut(s) 1002
Bse3DI GCAATG 1 cut(s) 739
Bse8I GATNNNNATC 1 cut(s) 69
BseDI CCNNGG 5 cut(s) 455, 558, 771, 837, 869
BseGI GGATG 4 cut(s) 29, 305, 477, 1012
BseJI GATNNNNATC 1 cut(s) 69
BseLI CCNNNNNNNGG 4 cut(s) 256, 486, 518, 1033
BseMI GCAATG 1 cut(s) 739
BseMII CTCAG 1 cut(s) 1016
BseNI ACTGG 2 cut(s) 11, 541
BseRI GAGGAG 4 cut(s) 429, 432, 440, 715
BseX3I CGGCCG 1 cut(s) 525
BseXI GCAGC 7 cut(s) 103, 131, 566, 769, 778, 781, 1006
BseYI CCCAGC 1 cut(s) 188
Bsh1236I CGCG 3 cut(s) 560, 714, 871
Bsh1285I CGRYCG 1 cut(s) 528
BshFI GGCC 6 cut(s) 454, 523, 527, 717, 851, 1050
BshNI GGYRCC 2 cut(s) 530, 815
BsiEI CGRYCG 1 cut(s) 528
BsiHKCI CYCGRG 1 cut(s) 518
BsiSI CCGG 3 cut(s) 512, 524, 528
BslI CCNNNNNNNGG 4 cut(s) 256, 486, 518, 1033
BsnI GGCC 6 cut(s) 454, 523, 527, 717, 851, 1050
BsoBI CYCGRG 1 cut(s) 518
Bsp143I GATC 8 cut(s) 64, 70, 141, 178, 298, 388, 402, 514
Bsp19I CCATGG 1 cut(s) 771
BspACI CCGC 8 cut(s) 558, 560, 705, 714, 785, 788, 869, 871
BspANI GGCC 6 cut(s) 454, 523, 527, 717, 851, 1050
BspCNI CTCAG 1 cut(s) 1015
BspFNI CGCG 3 cut(s) 560, 714, 871
BspHI TCATGA 1 cut(s) 391
BspLI GGNNCC 3 cut(s) 532, 718, 817
BspMAI CTGCAG 2 cut(s) 121, 556
BspMI ACCTGC 1 cut(s) 559
BspPI GGATC 2 cut(s) 78, 522
BspQI GCTCTTC 1 cut(s) 760
BspT107I GGYRCC 2 cut(s) 530, 815
BsrBI CCGCTC 1 cut(s) 705
BsrDI GCAATG 1 cut(s) 739
BsrFI RCCGGY 2 cut(s) 523, 527
BsrI ACTGG 2 cut(s) 11, 541
BssAI RCCGGY 2 cut(s) 523, 527
BssECI CCNNGG 5 cut(s) 455, 558, 771, 837, 869
BssMI GATC 8 cut(s) 64, 70, 141, 178, 298, 388, 402, 514
BssNI GRCGYC 1 cut(s) 816
BssT1I CCWWGG 3 cut(s) 455, 771, 837
Bst4CI ACNGT 2 cut(s) 608, 674
Bst6I CTCTTC 2 cut(s) 417, 760
BstACI GRCGYC 1 cut(s) 816
BstAPI GCANNNNNTGC 1 cut(s) 782
BstC8I GCNNGC 3 cut(s) 57, 525, 899
BstDEI CTNAG 1 cut(s) 1002
BstDSI CCRYGG 3 cut(s) 558, 771, 869
BstF5I GGATG 4 cut(s) 29, 305, 477, 1012
BstFNI CGCG 3 cut(s) 560, 714, 871
BstH2I RGCGCY 1 cut(s) 819
BstHHI GCGC 1 cut(s) 818
BstKTI GATC 8 cut(s) 67, 73, 144, 181, 301, 391, 405, 517
BstMBI GATC 8 cut(s) 64, 70, 141, 178, 298, 388, 402, 514
BstMCI CGRYCG 1 cut(s) 528
BstMWI GCNNNNNNNGC 8 cut(s) 566, 711, 767, 782, 788, 791, 794, 1019
BstNSI RCATGY 1 cut(s) 741
BstPAI GACNNNNGTC 1 cut(s) 11
BstSCI CCNGG 1 cut(s) 510
BstSFI CTRYAG 2 cut(s) 117, 552
BstUI CGCG 3 cut(s) 560, 714, 871
BstV1I GCAGC 7 cut(s) 103, 131, 566, 769, 778, 781, 1006
BstX2I RGATCY 1 cut(s) 514
BstYI RGATCY 1 cut(s) 514
BstZI CGGCCG 1 cut(s) 525
Bsu36I CCTNAGG 1 cut(s) 1002
BsuRI GGCC 6 cut(s) 454, 523, 527, 717, 851, 1050
BtgI CCRYGG 3 cut(s) 558, 771, 869
BtsCI GGATG 4 cut(s) 29, 305, 477, 1012
BtsIMutI CAGTG 3 cut(s) 534, 613, 819
BveI ACCTGC 1 cut(s) 559
Cac8I GCNNGC 3 cut(s) 57, 525, 899
CaiI CAGNNNCTG 1 cut(s) 782
CciI TCATGA 1 cut(s) 391
CfoI GCGC 1 cut(s) 818
Cfr10I RCCGGY 2 cut(s) 523, 527
Cfr13I GGNCC 4 cut(s) 361, 521, 707, 716
Cfr42I CCGCGG 2 cut(s) 561, 872
Csp6I GTAC 1 cut(s) 531
CspCI CAANNNNNGTGG 4 cut(s) 205, 240, 721, 756
CviAII CATG 7 cut(s) 47, 129, 230, 335, 392, 738, 772
CviQI GTAC 1 cut(s) 531
DdeI CTNAG 1 cut(s) 1002
DinI GGCGCC 1 cut(s) 817
DpnI GATC 8 cut(s) 66, 72, 143, 180, 300, 390, 404, 516
DpnII GATC 8 cut(s) 64, 70, 141, 178, 298, 388, 402, 514
EaeI YGGCCR 2 cut(s) 525, 849
EagI CGGCCG 1 cut(s) 525
Eam1104I CTCTTC 2 cut(s) 417, 760
EarI CTCTTC 2 cut(s) 417, 760
EclXI CGGCCG 1 cut(s) 525
Eco130I CCWWGG 3 cut(s) 455, 771, 837
Eco47I GGWCC 2 cut(s) 361, 707
Eco52I CGGCCG 1 cut(s) 525
Eco57I CTGAAG 1 cut(s) 1035
Eco81I CCTNAGG 1 cut(s) 1002
Eco88I CYCGRG 1 cut(s) 518
EcoT14I CCWWGG 3 cut(s) 455, 771, 837
EcoT22I ATGCAT 1 cut(s) 739
EgeI GGCGCC 1 cut(s) 817
EheI GGCGCC 1 cut(s) 817
ErhI CCWWGG 3 cut(s) 455, 771, 837
FaeI CATG 7 cut(s) 50, 132, 233, 338, 395, 741, 775
FatI CATG 7 cut(s) 46, 128, 229, 334, 391, 737, 771
FauI CCCGC 1 cut(s) 864
FauNDI CATATG 1 cut(s) 382
FbaI TGATCA 3 cut(s) 64, 298, 388
FokI GGATG 4 cut(s) 16, 292, 484, 1019
FseI GGCCGGCC 1 cut(s) 527
FspBI CTAG 1 cut(s) 198
GlaI GCGC 1 cut(s) 817
GsaI CCCAGC 1 cut(s) 192
GsuI CTGGAG 1 cut(s) 633
HaeII RGCGCY 1 cut(s) 819
HaeIII GGCC 6 cut(s) 454, 523, 527, 717, 851, 1050
HapII CCGG 3 cut(s) 512, 524, 528
HhaI GCGC 1 cut(s) 818
Hin1I GRCGYC 1 cut(s) 816
Hin1II CATG 7 cut(s) 50, 132, 233, 338, 395, 741, 775
Hin6I GCGC 1 cut(s) 816
HinP1I GCGC 1 cut(s) 816
HinfI GANTC 3 cut(s) 7, 167, 744
HpaII CCGG 3 cut(s) 512, 524, 528
HphI GGTGA 1 cut(s) 901
Hpy166II GTNNAC 1 cut(s) 343
Hpy188I TCNGA 5 cut(s) 21, 141, 584, 670, 749
Hpy188III TCNNGA 6 cut(s) 68, 392, 599, 627, 1004, 1065
Hpy8I GTNNAC 1 cut(s) 343
HpyCH4III ACNGT 2 cut(s) 608, 674
HpyCH4IV ACGT 1 cut(s) 345
HpyCH4V TGCA 6 cut(s) 119, 554, 732, 737, 797, 1022
HpyF10VI GCNNNNNNNGC 8 cut(s) 566, 711, 767, 782, 788, 791, 794, 1019
HpyF3I CTNAG 1 cut(s) 1002
HpySE526I ACGT 1 cut(s) 345
Hsp92I GRCGYC 1 cut(s) 816
Hsp92II CATG 7 cut(s) 50, 132, 233, 338, 395, 741, 775
HspAI GCGC 1 cut(s) 816
KasI GGCGCC 1 cut(s) 815
KpnI GGTACC 1 cut(s) 534
KroI GCCGGC 1 cut(s) 523
KroNI GCCGGC 1 cut(s) 525
Ksp22I TGATCA 3 cut(s) 64, 298, 388
KspI CCGCGG 2 cut(s) 561, 872
Kzo9I GATC 8 cut(s) 64, 70, 141, 178, 298, 388, 402, 514
LguI GCTCTTC 1 cut(s) 760
LmnI GCTCC 2 cut(s) 702, 1036
Lsp1109I GCAGC 7 cut(s) 103, 131, 566, 769, 778, 781, 1006
LweI GCATC 1 cut(s) 314
MaeI CTAG 1 cut(s) 198
MaeII ACGT 1 cut(s) 345
MaeIII GTNAC 2 cut(s) 674, 907
MalI GATC 8 cut(s) 66, 72, 143, 180, 300, 390, 404, 516
MbiI CCGCTC 1 cut(s) 705
MboI GATC 8 cut(s) 64, 70, 141, 178, 298, 388, 402, 514
MboII GAAGA 7 cut(s) 126, 154, 188, 309, 434, 777, 874
MflI RGATCY 1 cut(s) 514
MlsI TGGCCA 1 cut(s) 851
MluCI AATT 3 cut(s) 578, 942, 1053
MluNI TGGCCA 1 cut(s) 851
Mly113I GGCGCC 1 cut(s) 816
MlyI GAGTC 1 cut(s) 161
MmeI TCCRAC 1 cut(s) 772
Mox20I TGGCCA 1 cut(s) 851
Mph1103I ATGCAT 1 cut(s) 739
MroNI GCCGGC 1 cut(s) 523
MscI TGGCCA 1 cut(s) 851
MseI TTAA 2 cut(s) 945, 1056
Msp20I TGGCCA 1 cut(s) 851
MspA1I CMGCKG 3 cut(s) 560, 653, 871
MspI CCGG 3 cut(s) 512, 524, 528
MspR9I CCNGG 1 cut(s) 512
MvnI CGCG 3 cut(s) 560, 714, 871
MwoI GCNNNNNNNGC 8 cut(s) 566, 711, 767, 782, 788, 791, 794, 1019
NaeI GCCGGC 1 cut(s) 525
NarI GGCGCC 1 cut(s) 816
NciI CCSGG 1 cut(s) 512
NcoI CCATGG 1 cut(s) 771
NdeI CATATG 1 cut(s) 382
NdeII GATC 8 cut(s) 64, 70, 141, 178, 298, 388, 402, 514
NgoMIV GCCGGC 1 cut(s) 523
NlaIII CATG 7 cut(s) 50, 132, 233, 338, 395, 741, 775
NlaIV GGNNCC 3 cut(s) 532, 718, 817
NmuCI GTSAC 1 cut(s) 907
NsiI ATGCAT 1 cut(s) 739
NspI RCATGY 1 cut(s) 741
PagI TCATGA 1 cut(s) 391
PciSI GCTCTTC 1 cut(s) 760
PdiI GCCGGC 1 cut(s) 525
PfeI GAWTC 1 cut(s) 744
PleI GAGTC 1 cut(s) 161
PluTI GGCGCC 1 cut(s) 819
PpsI GAGTC 1 cut(s) 161
PshAI GACNNNNGTC 1 cut(s) 11
PshBI ATTAAT 2 cut(s) 945, 1056
PsiI TTATAA 1 cut(s) 350
PspFI CCCAGC 1 cut(s) 188
PspN4I GGNNCC 3 cut(s) 532, 718, 817
PspPI GGNCC 4 cut(s) 361, 521, 707, 716
PstI CTGCAG 2 cut(s) 121, 556
PstNI CAGNNNCTG 1 cut(s) 782
PsuI RGATCY 1 cut(s) 514
PvuII CAGCTG 1 cut(s) 653
RigI GGCCGGCC 1 cut(s) 527
RsaI GTAC 1 cut(s) 532
RsaNI GTAC 1 cut(s) 531
SacII CCGCGG 2 cut(s) 561, 872
SapI GCTCTTC 1 cut(s) 760
SaqAI TTAA 2 cut(s) 945, 1056
Sau3AI GATC 8 cut(s) 64, 70, 141, 178, 298, 388, 402, 514
Sau96I GGNCC 4 cut(s) 361, 521, 707, 716
SchI GAGTC 1 cut(s) 161
ScrFI CCNGG 1 cut(s) 512
SfaNI GCATC 1 cut(s) 314
SfcI CTRYAG 2 cut(s) 117, 552
SfoI GGCGCC 1 cut(s) 817
Sfr303I CCGCGG 2 cut(s) 561, 872
SgrBI CCGCGG 2 cut(s) 561, 872
SinI GGWCC 2 cut(s) 361, 707
Sse9I AATT 3 cut(s) 578, 942, 1053
SsiI CCGC 8 cut(s) 558, 560, 705, 714, 785, 788, 869, 871
SspDI GGCGCC 1 cut(s) 815
SspI AATATT 1 cut(s) 448
SspMI CTAG 1 cut(s) 198
StyD4I CCNGG 1 cut(s) 510
StyI CCWWGG 3 cut(s) 455, 771, 837
TaaI ACNGT 2 cut(s) 608, 674
TaiI ACGT 1 cut(s) 348
TaqI TCGA 2 cut(s) 51, 165
TasI AATT 3 cut(s) 578, 942, 1053
TauI GCSGC 4 cut(s) 560, 717, 788, 791
TfiI GAWTC 1 cut(s) 744
Tru1I TTAA 2 cut(s) 945, 1056
Tru9I TTAA 2 cut(s) 945, 1056
TscAI CASTG 3 cut(s) 541, 613, 826
TseFI GTSAC 1 cut(s) 907
TseI GCWGC 7 cut(s) 116, 119, 554, 782, 791, 794, 1019
Tsp45I GTSAC 1 cut(s) 907
TspDTI ATGAA 4 cut(s) 114, 408, 627, 819
TspRI CASTG 3 cut(s) 541, 613, 826
VpaK11BI GGWCC 2 cut(s) 361, 707
VspI ATTAAT 2 cut(s) 945, 1056
XapI RAATTY 1 cut(s) 578
XceI RCATGY 1 cut(s) 741
XcmI CCANNNNNNNNNTGG 1 cut(s) 844
XspI CTAG 1 cut(s) 198
Zsp2I ATGCAT 1 cut(s) 739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.