GATA transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g31930 |
| malus_domestica | MD08G1061600.v1.1 MD15G1060100.v1.1 |
| prunus_persica | Prupe.1G412000_v2.0.a1 |
| pyrus_communis | pycom08g05110 pycom15g05640 |
| rosa_chinensis | RchiOBHm_Chr6g0310911 |
| rosa_laevigata | RLG00000010451 |
| rosa_multiflora | Rmu_co8401939.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00158190 |
| rosa_rugosa | Rorug06G0383900 |
| rosa_samantha | Rh6AG497800 Rh6BG507900 Rh6BG508000 Rh6CG514000 Rh6CG514100 Rh6DG500500 |
| rosa_wichuraiana | Rw6G043360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 70 |
| AfaI | GTAC | 2 cut(s) | 16, 22 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 145 |
| AgsI | TTSAA | 2 cut(s) | 76, 125 |
| AhlI | ACTAGT | 1 cut(s) | 17 |
| AluBI | AGCT | 3 cut(s) | 64, 86, 131 |
| AluI | AGCT | 3 cut(s) | 64, 86, 131 |
| Ama87I | CYCGRG | 1 cut(s) | 114 |
| AoxI | GGCC | 1 cut(s) | 160 |
| ApeKI | GCWGC | 3 cut(s) | 26, 86, 131 |
| AspS9I | GGNCC | 1 cut(s) | 148 |
| AvaI | CYCGRG | 1 cut(s) | 114 |
| AvaII | GGWCC | 1 cut(s) | 148 |
| BbvI | GCAGC | 3 cut(s) | 38, 73, 118 |
| BccI | CCATC | 1 cut(s) | 106 |
| BcuI | ACTAGT | 1 cut(s) | 17 |
| BfaI | CTAG | 2 cut(s) | 18, 33 |
| BfmI | CTRYAG | 1 cut(s) | 24 |
| BfuAI | ACCTGC | 1 cut(s) | 70 |
| BisI | GCNGC | 3 cut(s) | 27, 87, 132 |
| BlsI | GCNGC | 3 cut(s) | 28, 88, 133 |
| BmcAI | AGTACT | 2 cut(s) | 16, 22 |
| Bme18I | GGWCC | 1 cut(s) | 148 |
| BmeT110I | CYCGRG | 1 cut(s) | 114 |
| BmgT120I | GGNCC | 1 cut(s) | 148 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 145 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 145 |
| BseRI | GAGGAG | 1 cut(s) | 84 |
| BseXI | GCAGC | 3 cut(s) | 38, 73, 118 |
| BshFI | GGCC | 1 cut(s) | 162 |
| BsiHKCI | CYCGRG | 1 cut(s) | 114 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 145 |
| BsnI | GGCC | 1 cut(s) | 162 |
| BsoBI | CYCGRG | 1 cut(s) | 114 |
| BspANI | GGCC | 1 cut(s) | 162 |
| BspMAI | CTGCAG | 1 cut(s) | 28 |
| BspMI | ACCTGC | 1 cut(s) | 70 |
| Bst4CI | ACNGT | 1 cut(s) | 14 |
| BstDEI | CTNAG | 1 cut(s) | 164 |
| BstSFI | CTRYAG | 1 cut(s) | 24 |
| BstV1I | GCAGC | 3 cut(s) | 38, 73, 118 |
| BsuRI | GGCC | 1 cut(s) | 162 |
| BveI | ACCTGC | 1 cut(s) | 70 |
| Cfr13I | GGNCC | 1 cut(s) | 148 |
| Csp6I | GTAC | 2 cut(s) | 15, 21 |
| CviJI | RGCY | 4 cut(s) | 64, 86, 131, 162 |
| CviKI_1 | RGCY | 4 cut(s) | 64, 86, 131, 162 |
| CviQI | GTAC | 2 cut(s) | 15, 21 |
| DdeI | CTNAG | 1 cut(s) | 164 |
| Eco47I | GGWCC | 1 cut(s) | 148 |
| Eco88I | CYCGRG | 1 cut(s) | 114 |
| FaiI | YATR | 3 cut(s) | 38, 40, 170 |
| FauNDI | CATATG | 1 cut(s) | 38 |
| Fnu4HI | GCNGC | 3 cut(s) | 27, 87, 132 |
| Fsp4HI | GCNGC | 3 cut(s) | 27, 87, 132 |
| FspBI | CTAG | 2 cut(s) | 18, 33 |
| GluI | GCNGC | 3 cut(s) | 27, 87, 132 |
| HaeIII | GGCC | 1 cut(s) | 162 |
| Hpy188III | TCNNGA | 2 cut(s) | 116, 180 |
| Hpy99I | CGWCG | 1 cut(s) | 11 |
| HpyCH4III | ACNGT | 1 cut(s) | 14 |
| HpyCH4V | TGCA | 1 cut(s) | 26 |
| HpyF3I | CTNAG | 1 cut(s) | 164 |
| LpnPI | CCDG | 3 cut(s) | 65, 144, 152 |
| Lsp1109I | GCAGC | 3 cut(s) | 38, 73, 118 |
| MaeI | CTAG | 2 cut(s) | 18, 33 |
| MaeIII | GTNAC | 1 cut(s) | 41 |
| MboII | GAAGA | 2 cut(s) | 137, 147 |
| MluCI | AATT | 1 cut(s) | 70 |
| MnlI | CCTC | 2 cut(s) | 105, 123 |
| NdeI | CATATG | 1 cut(s) | 38 |
| PaeR7I | CTCGAG | 1 cut(s) | 114 |
| PkrI | GCNGC | 3 cut(s) | 28, 88, 133 |
| PspPI | GGNCC | 1 cut(s) | 148 |
| PstI | CTGCAG | 1 cut(s) | 28 |
| RsaI | GTAC | 2 cut(s) | 16, 22 |
| RsaNI | GTAC | 2 cut(s) | 15, 21 |
| SatI | GCNGC | 3 cut(s) | 27, 87, 132 |
| Sau96I | GGNCC | 1 cut(s) | 148 |
| ScaI | AGTACT | 2 cut(s) | 16, 22 |
| SetI | ASST | 6 cut(s) | 34, 66, 84, 88, 133, 153 |
| SfcI | CTRYAG | 1 cut(s) | 24 |
| Sfr274I | CTCGAG | 1 cut(s) | 114 |
| SgeI | CNNG | 9 cut(s) | 30, 45, 58, 88, 92, 126, 128, 151, 171 |
| SinI | GGWCC | 1 cut(s) | 148 |
| SlaI | CTCGAG | 1 cut(s) | 114 |
| SmlI | CTYRAG | 1 cut(s) | 114 |
| SmoI | CTYRAG | 1 cut(s) | 114 |
| SpeI | ACTAGT | 1 cut(s) | 17 |
| Sse9I | AATT | 1 cut(s) | 70 |
| SspMI | CTAG | 2 cut(s) | 18, 33 |
| TaaI | ACNGT | 1 cut(s) | 14 |
| TaqI | TCGA | 1 cut(s) | 115 |
| TaqII | GACCGA | 1 cut(s) | 20 |
| TasI | AATT | 1 cut(s) | 70 |
| TatI | WGTACW | 2 cut(s) | 14, 20 |
| TseI | GCWGC | 3 cut(s) | 26, 86, 131 |
| VpaK11BI | GGWCC | 1 cut(s) | 148 |
| XhoI | CTCGAG | 1 cut(s) | 114 |
| XspI | CTAG | 2 cut(s) | 18, 33 |
| ZrmI | AGTACT | 2 cut(s) | 16, 22 |