Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0011804

Physical Location & Seq

Genomic Coordinates Reverse (-)

11482482 .. 11488233

Gene Structure 5752 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3117 bp

ATGGCGGGAAACGACTGGGTGAATAGTTACTTGGAAGCGATCCTCGACGTCGGTCCGGGCCTCGACGACGCCAAATCGTCGCTGCTCCTCCGCGAACGTGGCCGTTTCAGTCCGACTCGTTACTTCGTCGAAGAGGGCATCACTCGCTACGATGAGACCGATCTCCACCGCTCCTGGGTTCGGGCTGCGGCGACGGCGAGGAGTCCGGAGGAGAGAAACACCAGGTTGGAGAACATGTGCTGGCGAATTTGGAATTTGGCTCGCAAAAAGAAGCAGATTGAGGGAGAAGAAGCTCAGCGTGTGGCTAGACGTCGTCTTGAAAGGGAACGAGGCAGGAGAGAGGCGACTGAGGATATGTCAGAAGACTTGTCTGAGGGAGAGAAAGGAGACACGGTGGGTGACATTTCAGCTCATGGTGGTGATAGCACTAGAGGAAGAATGAAAAGAATCAATTCTACTGATGCGATGGAGAACTGGGCTAGTCAACAAAAAGAAAAGAAATTCTACATGGTGTTAATAAGCCTTCATGGCCTGATCCGTGGAGAGAATATGGAGCTTGGTCGTGATTCTGATACTGGTGGCCAGGTCAAGTATGTAGTAGAACTTGCCAGGGCCTTAGGTTCAATGCCTGGAGTTTATCGGGTTGATTTGCTTACAAGACAAGTGGCAGCTCCAGATGTGGATTGGAGTTATGGGGAACCAACTGAAATGCTGAATCCATTAAACACTGAGAATTCGAAGGAGGAGCTTGGGGAGAGTAGTGGAGCTTATATTGTCCGTATACCATTTGGCCCAAGAGATAAATATGCCCCAAAAGAACTTCTTTGGCCTCACATACCTGAGTTTGTTGACGGTGCACTTACCCACATTATACAGATGTCCAAAGCTCTGGGAGAGCAAATTGGAGGTGGGCAGCCAGTTTGGCCTGTTGCAATTCATGGACACTATGCAGATGCTGGTGATTCTGCTGCTCTTTTATCTGGTGCCCTGAATGTCCCAATGGTATTTACTGGTCACTCACTTGGACGAGATAAGCTTGAACAACTTTTAAAACAAGGACGTCAATCAAGGGAAGAAATAAATACAACGTACAAAATAATGAGACGGATAGAAGCAGAGGAGTTAACCCTAGATGCCTCTGAGATTGTTATCACAAGCACTAGACAGGAGATAGAATCACAATGGCGCTTGTATGATGGCTTTGATCCAATACTAGAACGCAAACTAAGAGCAAGAATCAAAAGGGGTGTAAGCTGTCACGGCAGGTTTATGCCTCGCATGGTTGTAATACCTCCAGGAATGGAATTTCATCATATTATTCCACCGGATGGAGATGGGGATGGTGAAGGGGAGAGACATGATGATAGTTCTATTTCTCCCGACCCGCCAATTTGGTCAGAGATCATGCGTTTTTTTACCAATCCACGGAAGCCTATGATACTTGCCCTTGCCAGGGCAGACCCTAAAAAGAATATTACGACCTTGGTCAAAGCATTTGGAGAGTGTCGTCCACTGAGGGAACTTGCTAACCTTACATTGATTATGGGAAACCGTGATGACATAGATGAAATGTCCAGCACAAATGCATCTGTGCTTCTTTCCATTCTTAAGCTGATTGACAGATATGATCTTTACGGTCATGTGGCATATCCGAAACATCACAAGCAGTCTGATGTTCCTGACATTTATCGTCTGGCAGCAAAGACAAAGGCAGCAGCTCATGGCTTACCTATCGTTGCCACACAAAATGGGGGTCCTGTTGATATTCATCGGGTTCTTGACAATGGTCTACTAGTTGATCGGCATGATCAGCGGTCAATAGCGGATGCCCTTCTGAAGCTTGTTTCGGACAAGCAACTTTGGGCAAGATGCAGGCAGAATGGACTGAAAAACATTCACCTTTTCTCATGGCCAGAGCATTGTAAGACATACTTAACTCGCATAACCAGTTGCAAACCAAGGCAGCCACAATGGCAAAGAAATGATGCTGACTTTGACAATTCAGAACCCGATTCACCTAGTGATTCTCTGAGGGATATTCAAGATATATCTTTGAACTTGAAACTCTCACTGGATGGCGACAAAACTGAAGGGAGTGCTGCTCTTGATAATGCTTTAGAGGCTGAAGACTGTGCTGCTGGAGGGAAGACTAAGGAGCAGAATGCGGTTTTGACATTGTCAAAAGGTGTTTGTCAAAAGGCTGGTGCCACAGAGAAAGCAGACAACAGTTCTGGGGCTGGTAAATTTCTGGCATTCAGGAAAAGGAAGTATGTTTGTGTAATTGCTGTGGATTGTGATACAACCTCAGAGTTCACTGAGATCATTGAGAAGGTTACTGAGGCAGCGGGGAAGGACAGAGATGCAGGACCTATTGGATTTATATTATCAACAGCATTGGGCATATCTGAGATCCATTCTCTTTTGATTTCAGGAGGTTTGAGTCCTTCACAGTTTGATGCTTTTATCTGTAACAGTGGTGGTGAGCTCTACTATCCATCTTCAAGCTCTGAGGATAGTCCTTCTGGGCTTCCCTTTGTGGTGGACATAGATTACCATTCACACATTGAATACCGCTGGGGAGCAGAAGGTTTGAGAAAGACATTGGTTCGTTGGGTCGCTAATTTCAACGAAAAGAAAGGAAGGGAAACTGTTACAGAAGATGTATCAGCATCAACTAACCATTGCTATGCGTATAAAGTGAAATATCCAGAACTGATTCCCCCTGTTAAGGAACTCCGGAAACTCATGAGAATTCAGGCTCTCCGTTGCCATGTTATATATTCCCTAAATGGCACCAGGCTGAATGTTATCCCTGTGTTGGCTTCTAGATCACAAGCACTCAGGTACCTGTATGTCCGTTGGGGCTTGAACTTGTCAACTGCTGTTGTCTTCGTGGGAGAAAGTGGTGACACGGATTATGAAGGTTTGCTTGGTGGCCTACACAAAACTGTGATACTGAAGGGAGTTGGCATTGGCGCTCGTAAGCTTCATGCCAACCGAAACTATCCTTTAGAACATGTCTTTCCAAACGACAGTCCCAATATGGCTCAAAGTGAAGGATGCTCCGAAAATGACATAAGAGCGTCATTGGTGAAACTAGGGATTCTTAAGCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0008194 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0016020 GO:0016043 GO:0016740 GO:0016757 GO:0016758 GO:0022607 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0035251 GO:0043062 GO:0044085 GO:0044464 GO:0045229 GO:0046524 GO:0046527 GO:0046903 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0071836 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 S6PP Sucrose_synth

Protein Analysis

1039

Amino Acids

115.82

Weight (kDa)

6.38

Isoelectric Point (pI)

46.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GT-B_Sucrose_synth	PF00862	167 - 434	2.8e-09	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	474 - 629	2.1e-10	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	478 - 617	2.7e-07	Glycosyl transferases group 1
S6PP	PF05116	818 - 970	1.3e-10	Sucrose-6F-phosphate phosphohydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0011804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11110
fragaria_vesca	FvH4_2g28820 FvH4_2g28820
malus_domestica	MD08G1157000.v1.1 MD15G1127900.v1.1
prunus_persica	Prupe.1G483200_v2.0.a1 Prupe.1G483200_v2.0.a1
pyrus_communis	pycom08g12930 pycom15g11500
rosa_chinensis	RchiOBHm_Chr6g0297571
rosa_laevigata	RLG00000011582
rosa_roxburghii	Rroxscaffold_7G00170350
rosa_rugosa	Rorug06G0273700 Rorug06G0273800 Rorug06G0273800
rosa_samantha	Rh6BG392800 Rh6CG398600 Rh6DG385200
rosa_wichuraiana	Rw6G033510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	51, 313, 1063
Acc36I	ACCTGC	1 cut(s)	1254
Acc65I	GGTACC	1 cut(s)	2844
AccB1I	GGYRCC	4 cut(s)	983, 2204, 2792, 2844
AccB7I	CCANNNNNTGG	1 cut(s)	1328
AccBSI	CCGCTC	1 cut(s)	171
AccI	GTMKAC	2 cut(s)	781, 1789
AccII	CGCG	1 cut(s)	93
AccIII	TCCGGA	2 cut(s)	205, 2736
AclWI	GGATC	4 cut(s)	34, 529, 1199, 2404
AcoI	YGGCCR	3 cut(s)	100, 580, 1910
AcsI	RAATTY	7 cut(s)	246, 253, 500, 733, 1304, 2243, 2751
AcuI	CTGAAG	4 cut(s)	1856, 2109, 2145, 2978
AcyI	GRCGYC	4 cut(s)	48, 69, 310, 1060
AdeI	CACNNNGTG	1 cut(s)	2021
AfaI	GTAC	2 cut(s)	1091, 2846
AfiI	CCNNNNNNNGG	8 cut(s)	175, 180, 1328, 1425, 1452, 1453, 2728, 2818
AflII	CTTAAG	2 cut(s)	1607, 3107
AflIII	ACRYGT	2 cut(s)	234, 3016
AhlI	ACTAGT	1 cut(s)	1792
AjnI	CCWGG	8 cut(s)	173, 221, 582, 608, 628, 1294, 1451, 2795
AjuI	GAANNNNNNNTTGG	4 cut(s)	14, 46, 2913, 2945
Alw21I	GWGCWC	2 cut(s)	859, 2487
Alw26I	GTCTC	4 cut(s)	149, 381, 1096, 1348
Alw44I	GTGCAC	1 cut(s)	855
AlwI	GGATC	4 cut(s)	34, 529, 1199, 2404
AlwNI	CAGNNNCTG	1 cut(s)	956
Aor13HI	TCCGGA	2 cut(s)	205, 2736
ApaLI	GTGCAC	1 cut(s)	855
ApoI	RAATTY	7 cut(s)	246, 253, 500, 733, 1304, 2243, 2751
ArsI	GACNNNNNNTTYG	2 cut(s)	1738, 1770
Asp700I	GAANNNNTTC	2 cut(s)	451, 2715
Asp718I	GGTACC	1 cut(s)	2844
AspLEI	GCGC	2 cut(s)	1188, 2978
AspS9I	GGNCC	6 cut(s)	53, 58, 612, 791, 1754, 2366
AsuC2I	CCSGG	1 cut(s)	57
AsuII	TTCGAA	1 cut(s)	737
AvaII	GGWCC	3 cut(s)	53, 1754, 2366
AxyI	CCTNAGG	1 cut(s)	616
BaeGI	GKGCMC	2 cut(s)	859, 988
BaeI	ACNNNNGTAYC	2 cut(s)	2828, 2861
BalI	TGGCCA	2 cut(s)	582, 1912
BanI	GGYRCC	4 cut(s)	983, 2204, 2792, 2844
BanII	GRGCYC	1 cut(s)	2487
BbsI	GAAGAC	4 cut(s)	369, 2133, 2153, 2881
Bbv12I	GWGCWC	2 cut(s)	859, 2487
BccI	CCATC	7 cut(s)	460, 1190, 1322, 1328, 1334, 2069, 2503
BceAI	ACGGC	3 cut(s)	87, 210, 1276
BciT130I	CCWGG	8 cut(s)	175, 223, 584, 610, 630, 1296, 1453, 2797
BclI	TGATCA	1 cut(s)	1807
BcnI	CCSGG	1 cut(s)	57
BcoDI	GTCTC	4 cut(s)	149, 381, 1096, 1348
BcuI	ACTAGT	1 cut(s)	1792
BfoI	RGCGCY	2 cut(s)	1189, 2979
BfrI	CTTAAG	2 cut(s)	1607, 3107
BfuAI	ACCTGC	1 cut(s)	1254
BglI	GCCNNNNNGGC	3 cut(s)	528, 922, 1972
BlpI	GCTNAGC	1 cut(s)	294
Bme1390I	CCNGG	9 cut(s)	57, 175, 223, 584, 610, 630, 1296, 1453, 2797
Bme18I	GGWCC	3 cut(s)	53, 1754, 2366
BmgT120I	GGNCC	6 cut(s)	53, 58, 612, 791, 1754, 2366
BmiI	GGNNCC	6 cut(s)	699, 985, 1755, 2206, 2794, 2846
BmrFI	CCNGG	9 cut(s)	57, 175, 223, 584, 610, 630, 1296, 1453, 2797
BmrI	ACTGGG	2 cut(s)	25, 484
BmuI	ACTGGG	2 cut(s)	25, 484
BoxI	GACNNNNGTC	3 cut(s)	51, 1484, 1785
BpiI	GAAGAC	4 cut(s)	369, 2133, 2153, 2881
BplI	GAGNNNNNCTC	2 cut(s)	2086, 2118
BpmI	CTGGAG	4 cut(s)	651, 657, 1278, 2160
Bpu1102I	GCTNAGC	1 cut(s)	294
Bpu14I	TTCGAA	1 cut(s)	737
BpuMI	CCSGG	1 cut(s)	57
BsaBI	GATNNNNATC	2 cut(s)	1148, 1767
BsaHI	GRCGYC	4 cut(s)	48, 69, 310, 1060
BsaI	GGTCTC	1 cut(s)	149
BsaJI	CCNNGG	7 cut(s)	174, 538, 609, 1424, 1452, 1482, 1958
BsaWI	WCCGGW	3 cut(s)	205, 1324, 2736
BsaXI	ACNNNNNCTCC	4 cut(s)	221, 251, 378, 408
Bsc4I	CCNNNNNNNGG	8 cut(s)	175, 180, 1328, 1425, 1452, 1453, 2728, 2818
Bse1I	ACTGG	7 cut(s)	20, 479, 580, 917, 1015, 1947, 2076
Bse21I	CCTNAGG	1 cut(s)	616
Bse3DI	GCAATG	1 cut(s)	2680
Bse8I	GATNNNNATC	2 cut(s)	1148, 1767
BseAI	TCCGGA	2 cut(s)	205, 2736
BseBI	CCWGG	8 cut(s)	175, 223, 584, 610, 630, 1296, 1453, 2797
BseDI	CCNNGG	7 cut(s)	174, 538, 609, 1424, 1452, 1482, 1958
BseGI	GGATG	5 cut(s)	1333, 1345, 1831, 2080, 3065
BseJI	GATNNNNATC	2 cut(s)	1148, 1767
BseLI	CCNNNNNNNGG	8 cut(s)	175, 180, 1328, 1425, 1452, 1453, 2728, 2818
BseMI	GCAATG	1 cut(s)	2680
BseNI	ACTGG	7 cut(s)	20, 479, 580, 917, 1015, 1947, 2076
BseRI	GAGGAG	5 cut(s)	77, 214, 224, 758, 1133
BseSI	GKGCMC	2 cut(s)	859, 988
BseYI	CCCAGC	1 cut(s)	2574
Bsh1236I	CGCG	1 cut(s)	93
BshNI	GGYRCC	4 cut(s)	983, 2204, 2792, 2844
BsiHKAI	GWGCWC	2 cut(s)	859, 2487
BsiSI	CCGG	4 cut(s)	56, 206, 1325, 2737
BslFI	GGGAC	2 cut(s)	980, 3021
BslI	CCNNNNNNNGG	8 cut(s)	175, 180, 1328, 1425, 1452, 1453, 2728, 2818
BsmAI	GTCTC	4 cut(s)	149, 381, 1096, 1348
BsmBI	CGTCTC	1 cut(s)	1096
BsmFI	GGGAC	2 cut(s)	980, 3021
BsmI	GAATGC	2 cut(s)	2167, 2252
Bso31I	GGTCTC	1 cut(s)	149
Bsp119I	TTCGAA	1 cut(s)	737
Bsp1286I	GDGCHC	3 cut(s)	859, 988, 2487
Bsp13I	TCCGGA	2 cut(s)	205, 2736
Bsp1720I	GCTNAGC	1 cut(s)	294
BspEI	TCCGGA	2 cut(s)	205, 2736
BspFNI	CGCG	1 cut(s)	93
BspHI	TCATGA	1 cut(s)	2745
BspLI	GGNNCC	6 cut(s)	699, 985, 1755, 2206, 2794, 2846
BspMI	ACCTGC	1 cut(s)	1254
BspPI	GGATC	4 cut(s)	34, 529, 1199, 2404
BspT104I	TTCGAA	1 cut(s)	737
BspT107I	GGYRCC	4 cut(s)	983, 2204, 2792, 2844
BspTI	CTTAAG	2 cut(s)	1607, 3107
BspTNI	GGTCTC	1 cut(s)	149
BsrBI	CCGCTC	1 cut(s)	171
BsrDI	GCAATG	1 cut(s)	2680
BsrI	ACTGG	7 cut(s)	20, 479, 580, 917, 1015, 1947, 2076
BssECI	CCNNGG	7 cut(s)	174, 538, 609, 1424, 1452, 1482, 1958
BssNAI	GTATAC	1 cut(s)	782
BssNI	GRCGYC	4 cut(s)	48, 69, 310, 1060
BssT1I	CCWWGG	2 cut(s)	1482, 1958
Bst1107I	GTATAC	1 cut(s)	782
Bst2UI	CCWGG	8 cut(s)	175, 223, 584, 610, 630, 1296, 1453, 2797
Bst6I	CTCTTC	1 cut(s)	126
BstACI	GRCGYC	4 cut(s)	48, 69, 310, 1060
BstAFI	CTTAAG	2 cut(s)	1607, 3107
BstBI	TTCGAA	1 cut(s)	737
BstC8I	GCNNGC	3 cut(s)	242, 262, 1874
BstDSI	CCRYGG	2 cut(s)	538, 1424
BstF5I	GGATG	5 cut(s)	1333, 1345, 1831, 2080, 3065
BstFNI	CGCG	1 cut(s)	93
BstH2I	RGCGCY	2 cut(s)	1189, 2979
BstHHI	GCGC	2 cut(s)	1188, 2978
BstMAI	GTCTC	4 cut(s)	149, 381, 1096, 1348
BstMWI	GCNNNNNNNGC	9 cut(s)	99, 144, 194, 528, 922, 1260, 1810, 1972, 2120
BstNI	CCWGG	8 cut(s)	175, 223, 584, 610, 630, 1296, 1453, 2797
BstNSI	RCATGY	2 cut(s)	238, 3020
BstPAI	GACNNNNGTC	3 cut(s)	51, 1484, 1785
BstSCI	CCNGG	9 cut(s)	55, 173, 221, 582, 608, 628, 1294, 1451, 2795
BstSLI	GKGCMC	2 cut(s)	859, 988
BstUI	CGCG	1 cut(s)	93
BstV2I	GAAGAC	4 cut(s)	369, 2133, 2153, 2881
BstX2I	RGATCY	1 cut(s)	2409
BstXI	CCANNNNNNTGG	1 cut(s)	889
BstYI	RGATCY	1 cut(s)	2409
BstZ17I	GTATAC	1 cut(s)	782
Bsu36I	CCTNAGG	1 cut(s)	616
BtgI	CCRYGG	2 cut(s)	538, 1424
BtgZI	GCGATG	1 cut(s)	479
BtsCI	GGATG	5 cut(s)	1333, 1345, 1831, 2080, 3065
BtsIMutI	CAGTG	5 cut(s)	726, 1511, 2069, 2313, 2479
BveI	ACCTGC	1 cut(s)	1254
Cac8I	GCNNGC	3 cut(s)	242, 262, 1874
CaiI	CAGNNNCTG	1 cut(s)	956
CciI	TCATGA	1 cut(s)	2745
CfoI	GCGC	2 cut(s)	1188, 2978
Cfr13I	GGNCC	6 cut(s)	53, 58, 612, 791, 1754, 2366
CpoI	CGGWCCG	1 cut(s)	53
CseI	GACGC	2 cut(s)	77, 3072
CsiI	ACCWGGT	1 cut(s)	221
Csp6I	GTAC	2 cut(s)	1090, 2845
CspCI	CAANNNNNGTGG	2 cut(s)	645, 680
CspI	CGGWCCG	1 cut(s)	53
CviQI	GTAC	2 cut(s)	1090, 2845
DraI	TTTAAA	1 cut(s)	1050
DraIII	CACNNNGTG	1 cut(s)	2021
EaeI	YGGCCR	3 cut(s)	100, 580, 1910
Eam1104I	CTCTTC	1 cut(s)	126
EarI	CTCTTC	1 cut(s)	126
Ecl136II	GAGCTC	1 cut(s)	2485
Eco130I	CCWWGG	2 cut(s)	1482, 1958
Eco24I	GRGCYC	1 cut(s)	2487
Eco31I	GGTCTC	1 cut(s)	149
Eco47I	GGWCC	3 cut(s)	53, 1754, 2366
Eco53kI	GAGCTC	1 cut(s)	2485
Eco57I	CTGAAG	4 cut(s)	1856, 2109, 2145, 2978
Eco81I	CCTNAGG	1 cut(s)	616
EcoICRI	GAGCTC	1 cut(s)	2485
EcoO109I	RGGNCCY	3 cut(s)	612, 1754, 2366
EcoRI	GAATTC	2 cut(s)	733, 2751
EcoRII	CCWGG	8 cut(s)	173, 221, 582, 608, 628, 1294, 1451, 2795
EcoT14I	CCWWGG	2 cut(s)	1482, 1958
EcoT22I	ATGCAT	1 cut(s)	1588
EcoT38I	GRGCYC	1 cut(s)	2487
ErhI	CCWWGG	2 cut(s)	1482, 1958
Esp3I	CGTCTC	1 cut(s)	1096
FalI	AAGNNNNNCTT	6 cut(s)	807, 839, 1916, 1948, 2913, 2945
FaqI	GGGAC	2 cut(s)	980, 3021
FauI	CCCGC	2 cut(s)	1392, 2338
FbaI	TGATCA	1 cut(s)	1807
FblI	GTMKAC	2 cut(s)	781, 1789
FokI	GGATG	5 cut(s)	1340, 1352, 1838, 2087, 3072
FriOI	GRGCYC	1 cut(s)	2487
GlaI	GCGC	2 cut(s)	1187, 2977
GsaI	CCCAGC	1 cut(s)	2578
GsuI	CTGGAG	4 cut(s)	651, 657, 1278, 2160
HaeII	RGCGCY	2 cut(s)	1189, 2979
HapII	CCGG	4 cut(s)	56, 206, 1325, 2737
HgaI	GACGC	2 cut(s)	77, 3072
HhaI	GCGC	2 cut(s)	1188, 2978
Hin1I	GRCGYC	4 cut(s)	48, 69, 310, 1060
Hin6I	GCGC	2 cut(s)	1186, 2976
HinP1I	GCGC	2 cut(s)	1186, 2976
HincII	GTYRAC	4 cut(s)	485, 850, 1125, 2877
HindII	GTYRAC	4 cut(s)	485, 850, 1125, 2877
HindIII	AAGCTT	3 cut(s)	1034, 1838, 2984
HpaI	GTTAAC	1 cut(s)	1125
HpaII	CCGG	4 cut(s)	56, 206, 1325, 2737
Hpy99I	CGWCG	8 cut(s)	50, 53, 68, 71, 82, 131, 196, 315
HpyCH4IV	ACGT	5 cut(s)	48, 97, 310, 1060, 1088
HpyCH4V	TGCA	7 cut(s)	857, 932, 950, 1586, 1872, 1953, 2363
HpyF10VI	GCNNNNNNNGC	9 cut(s)	99, 144, 194, 528, 922, 1260, 1810, 1972, 2120
HpySE526I	ACGT	5 cut(s)	48, 97, 310, 1060, 1088
Hsp92I	GRCGYC	4 cut(s)	48, 69, 310, 1060
HspAI	GCGC	2 cut(s)	1186, 2976
Kpn2I	TCCGGA	2 cut(s)	205, 2736
KpnI	GGTACC	1 cut(s)	2848
Ksp22I	TGATCA	1 cut(s)	1807
KspAI	GTTAAC	1 cut(s)	1125
LmnI	GCTCC	9 cut(s)	90, 176, 553, 676, 745, 764, 2155, 2579, 3068
MabI	ACCWGGT	1 cut(s)	221
MaeII	ACGT	5 cut(s)	48, 97, 310, 1060, 1088
MaeIII	GTNAC	9 cut(s)	26, 119, 398, 1013, 1256, 2332, 2468, 2650, 2906
MbiI	CCGCTC	1 cut(s)	171
MflI	RGATCY	1 cut(s)	2409
MhlI	GDGCHC	3 cut(s)	859, 988, 2487
MlsI	TGGCCA	2 cut(s)	582, 1912
MluNI	TGGCCA	2 cut(s)	582, 1912
MlyI	GAGTC	3 cut(s)	109, 211, 2449
MmeI	TCCRAC	2 cut(s)	137, 207
Mox20I	TGGCCA	2 cut(s)	582, 1912
Mph1103I	ATGCAT	1 cut(s)	1588
MroI	TCCGGA	2 cut(s)	205, 2736
MroXI	GAANNNNTTC	2 cut(s)	451, 2715
MscI	TGGCCA	2 cut(s)	582, 1912
MseI	TTAA	8 cut(s)	515, 722, 1049, 1124, 1608, 1934, 2727, 3108
MslI	CAYNNNNRTG	2 cut(s)	417, 2685
Msp20I	TGGCCA	2 cut(s)	582, 1912
MspA1I	CMGCKG	3 cut(s)	1813, 2345, 2574
MspCI	CTTAAG	2 cut(s)	1607, 3107
MspI	CCGG	4 cut(s)	56, 206, 1325, 2737
MspR9I	CCNGG	9 cut(s)	57, 175, 223, 584, 610, 630, 1296, 1453, 2797
Mva1269I	GAATGC	2 cut(s)	2167, 2252
MvaI	CCWGG	8 cut(s)	175, 223, 584, 610, 630, 1296, 1453, 2797
MvnI	CGCG	1 cut(s)	93
MwoI	GCNNNNNNNGC	9 cut(s)	99, 144, 194, 528, 922, 1260, 1810, 1972, 2120
NciI	CCSGG	1 cut(s)	57
NlaIV	GGNNCC	6 cut(s)	699, 985, 1755, 2206, 2794, 2846
NmuCI	GTSAC	4 cut(s)	398, 1013, 1256, 2906
NsiI	ATGCAT	1 cut(s)	1588
NspI	RCATGY	2 cut(s)	238, 3020
NspV	TTCGAA	1 cut(s)	737
PagI	TCATGA	1 cut(s)	2745
PciI	ACATGT	2 cut(s)	234, 3016
PcsI	WCGNNNNNNNCGW	1 cut(s)	156
PctI	GAATGC	2 cut(s)	2167, 2252
PdmI	GAANNNNTTC	2 cut(s)	451, 2715
PflFI	GACNNNGTC	2 cut(s)	312, 2176
PflMI	CCANNNNNTGG	1 cut(s)	1328
PfoI	TCCNGGA	1 cut(s)	1294
PleI	GAGTC	3 cut(s)	109, 210, 2448
PpsI	GAGTC	3 cut(s)	109, 210, 2448
PpuMI	RGGWCCY	2 cut(s)	1754, 2366
PscI	ACATGT	2 cut(s)	234, 3016
PshAI	GACNNNNGTC	3 cut(s)	51, 1484, 1785
Psp124BI	GAGCTC	1 cut(s)	2487
Psp5II	RGGWCCY	2 cut(s)	1754, 2366
Psp6I	CCWGG	8 cut(s)	173, 221, 582, 608, 628, 1294, 1451, 2795
PspFI	CCCAGC	1 cut(s)	2574
PspGI	CCWGG	8 cut(s)	173, 221, 582, 608, 628, 1294, 1451, 2795
PspN4I	GGNNCC	6 cut(s)	699, 985, 1755, 2206, 2794, 2846
PspPI	GGNCC	6 cut(s)	53, 58, 612, 791, 1754, 2366
PspPPI	RGGWCCY	2 cut(s)	1754, 2366
PstNI	CAGNNNCTG	1 cut(s)	956
PsuI	RGATCY	1 cut(s)	2409
PsyI	GACNNNGTC	2 cut(s)	312, 2176
RsaI	GTAC	2 cut(s)	1091, 2846
RsaNI	GTAC	2 cut(s)	1090, 2845
RseI	CAYNNNNRTG	2 cut(s)	417, 2685
Rsr2I	CGGWCCG	1 cut(s)	53
RsrII	CGGWCCG	1 cut(s)	53
SacI	GAGCTC	1 cut(s)	2487
SaqAI	TTAA	8 cut(s)	515, 722, 1049, 1124, 1608, 1934, 2727, 3108
Sau96I	GGNCC	6 cut(s)	53, 58, 612, 791, 1754, 2366
SchI	GAGTC	3 cut(s)	109, 211, 2449
ScrFI	CCNGG	9 cut(s)	57, 175, 223, 584, 610, 630, 1296, 1453, 2797
SduI	GDGCHC	3 cut(s)	859, 988, 2487
SexAI	ACCWGGT	1 cut(s)	221
SfuI	TTCGAA	1 cut(s)	737
SinI	GGWCC	3 cut(s)	53, 1754, 2366
SmiMI	CAYNNNNRTG	2 cut(s)	417, 2685
SmlI	CTYRAG	2 cut(s)	1607, 3107
SmoI	CTYRAG	2 cut(s)	1607, 3107
SpeI	ACTAGT	1 cut(s)	1792
SspI	AATATT	1 cut(s)	1474
SstI	GAGCTC	1 cut(s)	2487
StyD4I	CCNGG	9 cut(s)	55, 173, 221, 582, 608, 628, 1294, 1451, 2795
StyI	CCWWGG	2 cut(s)	1482, 1958
TaiI	ACGT	5 cut(s)	51, 100, 313, 1063, 1091
TaqI	TCGA	4 cut(s)	45, 63, 129, 737
TaqII	GACCGA	2 cut(s)	41, 173
TauI	GCSGC	1 cut(s)	191
Tru1I	TTAA	8 cut(s)	515, 722, 1049, 1124, 1608, 1934, 2727, 3108
Tru9I	TTAA	8 cut(s)	515, 722, 1049, 1124, 1608, 1934, 2727, 3108
TscAI	CASTG	5 cut(s)	733, 1518, 2076, 2320, 2479
TseFI	GTSAC	4 cut(s)	398, 1013, 1256, 2906
Tsp45I	GTSAC	4 cut(s)	398, 1013, 1256, 2906
TspDTI	ATGAA	8 cut(s)	455, 515, 926, 1298, 1581, 1757, 2934, 2978
TspGWI	ACGGA	7 cut(s)	527, 767, 1120, 1441, 2753, 2846, 2927
TspRI	CASTG	5 cut(s)	733, 1518, 2076, 2320, 2479
Tth111I	GACNNNGTC	2 cut(s)	312, 2176
Van91I	CCANNNNNTGG	1 cut(s)	1328
Vha464I	CTTAAG	2 cut(s)	1607, 3107
VneI	GTGCAC	1 cut(s)	855
VpaK11BI	GGWCC	3 cut(s)	53, 1754, 2366
XapI	RAATTY	7 cut(s)	246, 253, 500, 733, 1304, 2243, 2751
XbaI	TCTAGA	1 cut(s)	2825
XceI	RCATGY	2 cut(s)	238, 3020
XcmI	CCANNNNNNNNNTGG	1 cut(s)	681
XmiI	GTMKAC	2 cut(s)	781, 1789
XmnI	GAANNNNTTC	2 cut(s)	451, 2715
ZraI	GACGTC	3 cut(s)	49, 311, 1061
Zsp2I	ATGCAT	1 cut(s)	1588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.