Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0003833

Physical Location & Seq

Genomic Coordinates Forward (+)

12723715 .. 12728452

Gene Structure 4738 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g13820.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGGGCTGCGGTGGCTCCAAGGTCGACAACTTGCCGCTAGTCATGCTTTGCAGGGAGAGAAAGGACCATATCAAAACGGCGTCGGACCAGCGCTACGCTCTCGCCGCAGCCCACTTCTCCTATTTCCACTCCCTCCAGCACATCGGCGACGCCCTCTGCAAGTTCGTCGACGAAGACCTCATTGTATCCGGCGCTGGCGAGTCGTCCTCGCTGCCGGGATCTCCGGTTCTCACGTTGCCCTCCGACGAAGGCAAGCCCAGGAAGAGGAAACCCCATACAAATCACTTGTCTACATCGATTCCGCACTCTGTTTCCGCTGATTCGCTGAAAGCGGACGACAATGACGACGCTCACATACATTTGTCGTCTGGGTCCGAGTCAGAATCCGAGTTTGACTCATCGTCGGGTCACATTAACATCGAGGACAGCCCGGAGCAAGAGGTATCCTCTACTTCTTCCTATCGTTACCCTCCGAATTCACATGTGTATTATATGAGAAGGACGGAGACGCCGATGCAGACGGTGTTTTATGAAGAGCCGGAGAGATATCCGACCCAAAATGGTCCTTATCCGGATTCCTATCCGGGTTATTCGGGTTTTCAGCCGTATGGCGGTGGTGGATTTTTCGGGTACCCGATGGGGTCACCGGCGAATAGTGAGAATCCGTACAATCGACGGCAGCCAAGCCCACCACCACCAGCCGGTCCTCCACCTGCAACGCCTTCGCCTCCAAGGGTCTCGACTTGGGATTTCCTGAATGTGTTTGATACTTTTGATAATAGTGGTTACCCAGGTTACAATCGGAAGGCTAGATACGGGCACGGGTCCACGACGAGCAGTCCGGACTCGAAGGAGGTGAGGGAGAGAGAGGGGATTCCCGAATTGGAGGATGAGACAGAGCAGGAAGTGTTGAAAGAGGTTCACAAGGAGAAGCGGAGGGTGAATGCGGATGGTAATGCGAATAGGAATAGGAATCGAAATTCGGGTGAAGGGACTTCAAGGGCTGTGCCATTGAAGCAGCCAAGCAGTGAGGAGAGTTCAGGGACAGTGCCATTGCATAGCAGTGAGAGTTCCCATTCTGTCCATGGGAAGGAGATAAAGAGCAGTCCAGATACAAATGGATCGAAAAACTCCGAAGAGGAGTATGTGAAGAAAAAGAGGGTGAGTTTTGAGTTTGAGGTTGAGATTGAAGCTGCATCGGCGCATGATGTTGGATCTTCAAAAGGGAGTAGCTTAACTACATTGTCAGTCCACGGTACAAGGGACCTTCAGGAGGTTGTGAAGGAAATCAGGGATGAGTTCGAGACAGCCTCTAGTTATGGGAAAGAAGTTGCCATGCTGCTTGAGGTGGGCAAATTGCCTTATCAGCGTAGAGCTGCTGCACTTAAAGTTGTCTTCTCGAGGATTCTTTACCTTGTAGCACCTTCCCTGCTTTCTTCACCCCCGTCATCCATGCCCCCAGTAAGATTAAACTCTAAGACCGTTAAAATGGCAAACGCTTACCAGGGAGAACCTGCAAAAGATTTCAACAAGAAGCCTGGAAACCTCTCATCAACTTTGGAGAAACTATATGCATGGGAGAAAAAATTGTACAAGGAAGTCAAGGACGAAGAAAAGCTACGGGTTGACTATGAAAAGAAGTGCAAGAAATTGAAAAAACTAGATTATCATGGAGCTGAGTCTGCTAAGATTGATGCCACCCAGGCTTCTGTACGGAAGTTGCTAACAAAAATTAATGTTTGTATCAGAGCTGTTGATACCATATCGAGGAGGATACATAAGCTGAGGGATGAAGAATTGCTTCCCCAAGTTGCAGAATTGATTCATGGATTGATAAGAATGTGGAAATCCATGCTCAAATGCCACCAGAAACAGTTCCAAGCTATTATGGAGAGCAAAATTCGATCTCTTAAGGTGAGTGCTGGCCTTCGAAGAGATTCTGATTTGAAAGCTACTCTTGAACTTGAAATGGAGCTTTTGAGCTGGTGCGCATCCTTTAACAATTGGGTTAACACCCAAAAGTCCTATGTGGAGTCCTTAAATGGGTGGCTTTCAAGGTGCATTAACCAGGAACCTGAAGAAACGCCTGATGGAGTTGCCCCTTTCTCCCCAAGCCGGATGGGAGCTCCACCCATTTTTGTAGTTTGTAATGATTGGTGCCAAGCTATGGAAAGAATTTCTGAAAAGGGGGTGGCGGATGCGATGCATGATTTTGCTTCAACCTTACACCAGTTATGGGAAAGGCAGGATGAGGAGCAACGTCAAAGGATCAAAGCTGAGTACGTCTCCAAGAATTTGGAGAGCCAGCTTAGAAAATTGCATATGGAGAGGTTGAAAAGAGACCATGACCATGATGCATCAACAGACAAAGCCGCTCTGTCAAAGTCACCTTCCGATAGTGGAGTTTTACCACTGGATGATCTGAAGGTGGATTTGGATTCAATGAAGAAGAGATTAGCCGAGGAGAGAGCGAGGCATAAGGAGGCCATCGAATTGGTTAATCACGCAGCTTCCAATAGTTTGCAAGGTGGTTTGGTCCCAATTTTCGAAACTTTAAGTAGTTTCACTTCAGAGGCTCTGAAAGTTCACGAGCAAGTCAGGCTTGAAGATACCGGAGGCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

875

Amino Acids

97.65

Weight (kDa)

6.35

Isoelectric Point (pI)

53.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21740 AT1G77500
fragaria_vesca	FvH4_2g27210 FvH4_2g27210 FvH4_2g27210 FvH4_2g27210 FvH4_2g27210
malus_domestica	MD08G1161000.v1.1 MD15G1346100.v1.1
prunus_persica	Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1
pyrus_communis	pycom08g13820 pycom15g31020
rosa_chinensis	RchiOBHm_Chr6g0296121
rosa_laevigata	RLG00000011728
rosa_multiflora	Rmu_sc0003139.1_g000046
rosa_roxburghii	Rroxscaffold_1G00036630 Rroxscaffold_7G00171810 Rroxscaffold_7G00178240
rosa_rugosa	Rorug06G0257900 Rorug06G0258000 Rorug06G0258100 Rorug06G0258200
rosa_samantha	Rh6AG370700 Rh6BG378300 Rh6CG383900 Rh6DG370700
rosa_wichuraiana	Rw6G032310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	721
Acc16I	TGCGCA	1 cut(s)	1990
Acc36I	ACCTGC	2 cut(s)	721, 1522
Acc65I	GGTACC	1 cut(s)	630
AccB1I	GGYRCC	2 cut(s)	630, 2157
AccB7I	CCANNNNNTGG	1 cut(s)	2167
AccBSI	CCGCTC	1 cut(s)	2375
AccI	GTMKAC	3 cut(s)	24, 168, 290
AccIII	TCCGGA	2 cut(s)	571, 841
AclWI	GGATC	4 cut(s)	226, 1129, 1222, 2276
AcsI	RAATTY	5 cut(s)	475, 979, 1899, 2175, 2293
AcuI	CTGAAG	4 cut(s)	1253, 2097, 2444, 2553
AcyI	GRCGYC	3 cut(s)	80, 150, 509
AfaI	GTAC	6 cut(s)	632, 668, 1258, 1592, 1713, 2282
AfeI	AGCGCT	1 cut(s)	92
AflII	CTTAAG	1 cut(s)	1910
AflIII	ACRYGT	1 cut(s)	481
AhdI	GACNNNNNGTC	2 cut(s)	400, 837
AjnI	CCWGG	6 cut(s)	257, 790, 1503, 1537, 1701, 2067
AjuI	GAANNNNNNNTTGG	2 cut(s)	2417, 2449
AloI	GAACNNNNNNTCC	2 cut(s)	210, 242
Alw21I	GWGCWC	1 cut(s)	2128
Alw26I	GTCTC	6 cut(s)	500, 742, 887, 1298, 2290, 2334
AlwI	GGATC	4 cut(s)	226, 1129, 1222, 2276
Ama87I	CYCGRG	1 cut(s)	1399
Aor13HI	TCCGGA	2 cut(s)	571, 841
Aor51HI	AGCGCT	1 cut(s)	92
AoxI	GGCC	2 cut(s)	1924, 2484
ApoI	RAATTY	5 cut(s)	475, 979, 1899, 2175, 2293
ArsI	GACNNNNNNTTYG	2 cut(s)	272, 304
AseI	ATTAAT	1 cut(s)	1734
Asp700I	GAANNNNTTC	4 cut(s)	1800, 1821, 1874, 1936
Asp718I	GGTACC	1 cut(s)	630
AspLEI	GCGC	4 cut(s)	93, 194, 1204, 1991
AspS9I	GGNCC	8 cut(s)	64, 85, 372, 563, 704, 825, 1264, 2536
AsuC2I	CCSGG	3 cut(s)	216, 431, 585
AsuHPI	GGTGA	8 cut(s)	636, 868, 952, 998, 1174, 1431, 1927, 2379
AsuII	TTCGAA	2 cut(s)	1930, 2547
AvaI	CYCGRG	1 cut(s)	1399
AvaII	GGWCC	8 cut(s)	64, 85, 372, 563, 704, 825, 1264, 2536
BaeGI	GKGCMC	1 cut(s)	822
BanI	GGYRCC	2 cut(s)	630, 2157
BanII	GRGCYC	1 cut(s)	2128
BarI	GAAGNNNNNNTAC	6 cut(s)	797, 829, 1602, 1634, 2551, 2583
BauI	CACGAG	1 cut(s)	2588
BbsI	GAAGAC	2 cut(s)	180, 1387
Bbv12I	GWGCWC	1 cut(s)	2128
BbvCI	CCTCAGC	1 cut(s)	1784
BbvI	GCAGC	9 cut(s)	119, 198, 691, 1030, 1180, 1326, 1363, 1366, 2519
BccI	CCATC	5 cut(s)	631, 944, 2084, 2113, 2495
BceAI	ACGGC	3 cut(s)	93, 589, 692
BcgI	CGANNNNNNTGC	4 cut(s)	148, 182, 705, 739
BciT130I	CCWGG	6 cut(s)	259, 792, 1505, 1539, 1703, 2069
BciVI	GTATCC	3 cut(s)	196, 454, 1767
BcnI	CCSGG	3 cut(s)	216, 431, 585
BcoDI	GTCTC	6 cut(s)	500, 742, 887, 1298, 2290, 2334
BfaI	CTAG	4 cut(s)	38, 810, 1314, 1661
BfoI	RGCGCY	2 cut(s)	94, 195
BfrI	CTTAAG	1 cut(s)	1910
BfuAI	ACCTGC	2 cut(s)	721, 1522
BfuI	GTATCC	3 cut(s)	196, 454, 1767
BglI	GCCNNNNNGGC	1 cut(s)	1703
Bme1390I	CCNGG	9 cut(s)	216, 259, 431, 585, 792, 1505, 1539, 1703, 2069
Bme18I	GGWCC	8 cut(s)	64, 85, 372, 563, 704, 825, 1264, 2536
BmeRI	GACNNNNNGTC	2 cut(s)	400, 837
BmeT110I	CYCGRG	1 cut(s)	1399
BmgT120I	GGNCC	8 cut(s)	64, 85, 372, 563, 704, 825, 1264, 2536
BmiI	GGNNCC	8 cut(s)	16, 373, 632, 826, 1265, 2073, 2159, 2538
BmrFI	CCNGG	9 cut(s)	216, 259, 431, 585, 792, 1505, 1539, 1703, 2069
BmrI	ACTGGG	1 cut(s)	1454
BmsI	GCATC	8 cut(s)	504, 1205, 1684, 2000, 2188, 2193, 2344, 2366
BmuI	ACTGGG	1 cut(s)	1454
BpiI	GAAGAC	2 cut(s)	180, 1387
BpmI	CTGGAG	1 cut(s)	119
Bpu10I	CCTNAGC	1 cut(s)	1784
Bpu14I	TTCGAA	2 cut(s)	1930, 2547
BpuEI	CTTGAG	1 cut(s)	1364
BpuMI	CCSGG	3 cut(s)	216, 431, 585
Bsa29I	ATCGAT	1 cut(s)	296
BsaBI	GATNNNNATC	1 cut(s)	579
BsaHI	GRCGYC	3 cut(s)	80, 150, 509
BsaI	GGTCTC	2 cut(s)	742, 2334
BsaJI	CCNNGG	9 cut(s)	18, 257, 731, 790, 1084, 1252, 1504, 1701, 2460
BsaWI	WCCGGW	4 cut(s)	223, 571, 841, 2612
Bse118I	RCCGGY	2 cut(s)	646, 701
Bse1I	ACTGG	3 cut(s)	1460, 2230, 2418
Bse3DI	GCAATG	1 cut(s)	1052
Bse8I	GATNNNNATC	1 cut(s)	579
BseAI	TCCGGA	2 cut(s)	571, 841
BseBI	CCWGG	6 cut(s)	259, 792, 1505, 1539, 1703, 2069
BseCI	ATCGAT	1 cut(s)	296
BseDI	CCNNGG	9 cut(s)	18, 257, 731, 790, 1084, 1252, 1504, 1701, 2460
BseJI	GATNNNNATC	1 cut(s)	579
BseMI	GCAATG	1 cut(s)	1052
BseMII	CTCAG	3 cut(s)	1668, 1775, 2268
BseNI	ACTGG	3 cut(s)	1460, 2230, 2418
BseRI	GAGGAG	5 cut(s)	1046, 1154, 1783, 2267, 2477
BseSI	GKGCMC	1 cut(s)	822
BseXI	GCAGC	9 cut(s)	119, 198, 691, 1030, 1180, 1326, 1363, 1366, 2519
BsgI	GTGCAG	1 cut(s)	1365
BshFI	GGCC	2 cut(s)	1926, 2486
BshNI	GGYRCC	2 cut(s)	630, 2157
BshVI	ATCGAT	1 cut(s)	296
BsiHKAI	GWGCWC	1 cut(s)	2128
BsiHKCI	CYCGRG	1 cut(s)	1399
BslFI	GGGAC	4 cut(s)	1006, 1057, 1277, 2522
BsmAI	GTCTC	6 cut(s)	500, 742, 887, 1298, 2290, 2334
BsmBI	CGTCTC	2 cut(s)	500, 2290
BsmFI	GGGAC	4 cut(s)	1006, 1057, 1277, 2522
BsmI	GAATGC	1 cut(s)	949
BsnI	GGCC	2 cut(s)	1926, 2486
Bso31I	GGTCTC	2 cut(s)	742, 2334
BsoBI	CYCGRG	1 cut(s)	1399
Bsp119I	TTCGAA	2 cut(s)	1930, 2547
Bsp1286I	GDGCHC	2 cut(s)	822, 2128
Bsp13I	TCCGGA	2 cut(s)	571, 841
Bsp1407I	TGTACA	1 cut(s)	1590
Bsp143I	GATC	6 cut(s)	218, 1121, 1214, 1904, 2268, 2419
Bsp19I	CCATGG	1 cut(s)	1084
BspANI	GGCC	2 cut(s)	1926, 2486
BspCNI	CTCAG	3 cut(s)	1669, 1776, 2269
BspDI	ATCGAT	1 cut(s)	296
BspEI	TCCGGA	2 cut(s)	571, 841
BspLI	GGNNCC	8 cut(s)	16, 373, 632, 826, 1265, 2073, 2159, 2538
BspMI	ACCTGC	2 cut(s)	721, 1522
BspPI	GGATC	4 cut(s)	226, 1129, 1222, 2276
BspQI	GCTCTTC	1 cut(s)	528
BspT104I	TTCGAA	2 cut(s)	1930, 2547
BspT107I	GGYRCC	2 cut(s)	630, 2157
BspTI	CTTAAG	1 cut(s)	1910
BspTNI	GGTCTC	2 cut(s)	742, 2334
BsrBI	CCGCTC	1 cut(s)	2375
BsrDI	GCAATG	1 cut(s)	1052
BsrFI	RCCGGY	2 cut(s)	646, 701
BsrGI	TGTACA	1 cut(s)	1590
BsrI	ACTGG	3 cut(s)	1460, 2230, 2418
BssAI	RCCGGY	2 cut(s)	646, 701
BssECI	CCNNGG	9 cut(s)	18, 257, 731, 790, 1084, 1252, 1504, 1701, 2460
BssMI	GATC	6 cut(s)	218, 1121, 1214, 1904, 2268, 2419
BssNI	GRCGYC	3 cut(s)	80, 150, 509
BssSI	CACGAG	1 cut(s)	2588
BssT1I	CCWWGG	3 cut(s)	18, 731, 1084
Bst2BI	CACGAG	1 cut(s)	2588
Bst2UI	CCWGG	6 cut(s)	259, 792, 1505, 1539, 1703, 2069
Bst4CI	ACNGT	5 cut(s)	523, 1048, 1256, 1483, 1875
Bst6I	CTCTTC	5 cut(s)	257, 528, 1131, 1927, 2444
BstACI	GRCGYC	3 cut(s)	80, 150, 509
BstAFI	CTTAAG	1 cut(s)	1910
BstAUI	TGTACA	1 cut(s)	1590
BstBI	TTCGAA	2 cut(s)	1930, 2547
BstC8I	GCNNGC	4 cut(s)	196, 254, 1924, 2306
BstDEI	CTNAG	6 cut(s)	1476, 1677, 1686, 1784, 2277, 2309
BstDSI	CCRYGG	2 cut(s)	1084, 1252
BstEII	GGTNACC	2 cut(s)	642, 785
BstENI	CCTNNNNNAGG	1 cut(s)	1271
BstH2I	RGCGCY	2 cut(s)	94, 195
BstHHI	GCGC	4 cut(s)	93, 194, 1204, 1991
BstKTI	GATC	6 cut(s)	221, 1124, 1217, 1907, 2271, 2422
BstMAI	GTCTC	6 cut(s)	500, 742, 887, 1298, 2290, 2334
BstMBI	GATC	6 cut(s)	218, 1121, 1214, 1904, 2268, 2419
BstMWI	GCNNNNNNNGC	9 cut(s)	12, 43, 104, 1015, 1199, 1366, 1682, 1703, 2599
BstNI	CCWGG	6 cut(s)	259, 792, 1505, 1539, 1703, 2069
BstNSI	RCATGY	1 cut(s)	485
BstPI	GGTNACC	2 cut(s)	642, 785
BstSCI	CCNGG	9 cut(s)	214, 257, 429, 583, 790, 1503, 1537, 1701, 2067
BstSLI	GKGCMC	1 cut(s)	822
BstV1I	GCAGC	9 cut(s)	119, 198, 691, 1030, 1180, 1326, 1363, 1366, 2519
BstV2I	GAAGAC	2 cut(s)	180, 1387
BstX2I	RGATCY	2 cut(s)	218, 1214
BstXI	CCANNNNNNTGG	2 cut(s)	2296, 2494
BstYI	RGATCY	2 cut(s)	218, 1214
Bsu15I	ATCGAT	1 cut(s)	296
BsuI	GTATCC	3 cut(s)	196, 454, 1767
BsuRI	GGCC	2 cut(s)	1926, 2486
BsuTUI	ATCGAT	1 cut(s)	296
BtgI	CCRYGG	2 cut(s)	1084, 1252
BtgZI	GCGATG	1 cut(s)	2216
BtsI	GCAGTG	2 cut(s)	1033, 1069
BtsIMutI	CAGTG	4 cut(s)	1033, 1053, 1069, 2411
BveI	ACCTGC	2 cut(s)	721, 1522
Cac8I	GCNNGC	4 cut(s)	196, 254, 1924, 2306
CfoI	GCGC	4 cut(s)	93, 194, 1204, 1991
Cfr10I	RCCGGY	2 cut(s)	646, 701
Cfr13I	GGNCC	8 cut(s)	64, 85, 372, 563, 704, 825, 1264, 2536
ClaI	ATCGAT	1 cut(s)	296
CseI	GACGC	4 cut(s)	69, 158, 356, 517
Csp6I	GTAC	6 cut(s)	631, 667, 1257, 1591, 1712, 2281
CviQI	GTAC	6 cut(s)	631, 667, 1257, 1591, 1712, 2281
DdeI	CTNAG	6 cut(s)	1476, 1677, 1686, 1784, 2277, 2309
DpnI	GATC	6 cut(s)	220, 1123, 1216, 1906, 2270, 2421
DpnII	GATC	6 cut(s)	218, 1121, 1214, 1904, 2268, 2419
DriI	GACNNNNNGTC	2 cut(s)	400, 837
Eam1104I	CTCTTC	5 cut(s)	257, 528, 1131, 1927, 2444
Eam1105I	GACNNNNNGTC	2 cut(s)	400, 837
EarI	CTCTTC	5 cut(s)	257, 528, 1131, 1927, 2444
EciI	GGCGGA	1 cut(s)	2210
Ecl136II	GAGCTC	1 cut(s)	2126
Eco130I	CCWWGG	3 cut(s)	18, 731, 1084
Eco24I	GRGCYC	1 cut(s)	2128
Eco31I	GGTCTC	2 cut(s)	742, 2334
Eco32I	GATATC	1 cut(s)	548
Eco47I	GGWCC	8 cut(s)	64, 85, 372, 563, 704, 825, 1264, 2536
Eco47III	AGCGCT	1 cut(s)	92
Eco53kI	GAGCTC	1 cut(s)	2126
Eco57I	CTGAAG	4 cut(s)	1253, 2097, 2444, 2553
Eco88I	CYCGRG	1 cut(s)	1399
Eco91I	GGTNACC	2 cut(s)	642, 785
EcoICRI	GAGCTC	1 cut(s)	2126
EcoNI	CCTNNNNNAGG	1 cut(s)	1271
EcoO109I	RGGNCCY	1 cut(s)	1264
EcoO65I	GGTNACC	2 cut(s)	642, 785
EcoRI	GAATTC	1 cut(s)	475
EcoRII	CCWGG	6 cut(s)	257, 790, 1503, 1537, 1701, 2067
EcoRV	GATATC	1 cut(s)	548
EcoT14I	CCWWGG	3 cut(s)	18, 731, 1084
EcoT22I	ATGCAT	3 cut(s)	1576, 2208, 2359
EcoT38I	GRGCYC	1 cut(s)	2128
ErhI	CCWWGG	3 cut(s)	18, 731, 1084
Esp3I	CGTCTC	2 cut(s)	500, 2290
FalI	AAGNNNNNCTT	6 cut(s)	1785, 1817, 1941, 1973, 2586, 2618
FaqI	GGGAC	4 cut(s)	1006, 1057, 1277, 2522
FauNDI	CATATG	1 cut(s)	2322
FblI	GTMKAC	3 cut(s)	24, 168, 290
FriOI	GRGCYC	1 cut(s)	2128
FspAI	RTGCGCAY	1 cut(s)	1990
FspBI	CTAG	4 cut(s)	38, 810, 1314, 1661
FspI	TGCGCA	1 cut(s)	1990
GlaI	GCGC	4 cut(s)	92, 193, 1203, 1990
GsuI	CTGGAG	1 cut(s)	119
HaeII	RGCGCY	2 cut(s)	94, 195
HaeIII	GGCC	2 cut(s)	1926, 2486
HgaI	GACGC	4 cut(s)	69, 158, 356, 517
HhaI	GCGC	4 cut(s)	93, 194, 1204, 1991
Hin1I	GRCGYC	3 cut(s)	80, 150, 509
Hin6I	GCGC	4 cut(s)	91, 192, 1202, 1989
HinP1I	GCGC	4 cut(s)	91, 192, 1202, 1989
HincII	GTYRAC	4 cut(s)	25, 169, 1627, 2011
HindII	GTYRAC	4 cut(s)	25, 169, 1627, 2011
HpaI	GTTAAC	1 cut(s)	2011
HphI	GGTGA	8 cut(s)	636, 868, 952, 998, 1174, 1431, 1927, 2379
Hpy166II	GTNNAC	9 cut(s)	25, 169, 291, 828, 922, 1252, 1627, 2011, 2587
Hpy8I	GTNNAC	9 cut(s)	25, 169, 291, 828, 922, 1252, 1627, 2011, 2587
Hpy99I	CGWCG	9 cut(s)	85, 152, 170, 173, 248, 350, 406, 678, 835
HpyCH4III	ACNGT	5 cut(s)	523, 1048, 1256, 1483, 1875
HpyCH4IV	ACGT	3 cut(s)	233, 2260, 2283
HpyF10VI	GCNNNNNNNGC	9 cut(s)	12, 43, 104, 1015, 1199, 1366, 1682, 1703, 2599
HpyF3I	CTNAG	6 cut(s)	1476, 1677, 1686, 1784, 2277, 2309
HpySE526I	ACGT	3 cut(s)	233, 2260, 2283
Hsp92I	GRCGYC	3 cut(s)	80, 150, 509
HspAI	GCGC	4 cut(s)	91, 192, 1202, 1989
Kpn2I	TCCGGA	2 cut(s)	571, 841
KpnI	GGTACC	1 cut(s)	634
KspAI	GTTAAC	1 cut(s)	2011
Kzo9I	GATC	6 cut(s)	218, 1121, 1214, 1904, 2268, 2419
LguI	GCTCTTC	1 cut(s)	528
LmnI	GCTCC	7 cut(s)	20, 433, 1673, 1972, 2123, 2131, 2254
Lsp1109I	GCAGC	9 cut(s)	119, 198, 691, 1030, 1180, 1326, 1363, 1366, 2519
LweI	GCATC	8 cut(s)	504, 1205, 1684, 2000, 2188, 2193, 2344, 2366
MaeI	CTAG	4 cut(s)	38, 810, 1314, 1661
MaeII	ACGT	3 cut(s)	233, 2260, 2283
MaeIII	GTNAC	6 cut(s)	407, 464, 642, 785, 794, 2385
MalI	GATC	6 cut(s)	220, 1123, 1216, 1906, 2270, 2421
MbiI	CCGCTC	1 cut(s)	2375
MboI	GATC	6 cut(s)	218, 1121, 1214, 1904, 2268, 2419
MfeI	CAATTG	1 cut(s)	2002
MflI	RGATCY	2 cut(s)	218, 1214
MhlI	GDGCHC	2 cut(s)	822, 2128
MlyI	GAGTC	6 cut(s)	209, 386, 389, 839, 1688, 2042
MmeI	TCCRAC	4 cut(s)	63, 267, 575, 1192
Mph1103I	ATGCAT	3 cut(s)	1576, 2208, 2359
MroI	TCCGGA	2 cut(s)	571, 841
MroXI	GAANNNNTTC	4 cut(s)	1800, 1821, 1874, 1936
MslI	CAYNNNNRTG	2 cut(s)	1062, 2349
MspA1I	CMGCKG	1 cut(s)	317
MspCI	CTTAAG	1 cut(s)	1910
MspR9I	CCNGG	9 cut(s)	216, 259, 431, 585, 792, 1505, 1539, 1703, 2069
MunI	CAATTG	1 cut(s)	2002
Mva1269I	GAATGC	1 cut(s)	949
MvaI	CCWGG	6 cut(s)	259, 792, 1505, 1539, 1703, 2069
MwoI	GCNNNNNNNGC	9 cut(s)	12, 43, 104, 1015, 1199, 1366, 1682, 1703, 2599
NciI	CCSGG	3 cut(s)	216, 431, 585
NcoI	CCATGG	1 cut(s)	1084
NdeI	CATATG	1 cut(s)	2322
NdeII	GATC	6 cut(s)	218, 1121, 1214, 1904, 2268, 2419
NlaIV	GGNNCC	8 cut(s)	16, 373, 632, 826, 1265, 2073, 2159, 2538
NmeAIII	GCCGAG	1 cut(s)	2485
NmuCI	GTSAC	3 cut(s)	407, 642, 2385
NsbI	TGCGCA	1 cut(s)	1990
NsiI	ATGCAT	3 cut(s)	1576, 2208, 2359
NspI	RCATGY	1 cut(s)	485
NspV	TTCGAA	2 cut(s)	1930, 2547
PaeR7I	CTCGAG	1 cut(s)	1399
PaqCI	CACCTGC	1 cut(s)	721
PciI	ACATGT	1 cut(s)	481
PciSI	GCTCTTC	1 cut(s)	528
PcsI	WCGNNNNNNNCGW	2 cut(s)	342, 509
PctI	GAATGC	1 cut(s)	949
PdmI	GAANNNNTTC	4 cut(s)	1800, 1821, 1874, 1936
PflMI	CCANNNNNTGG	1 cut(s)	2167
PleI	GAGTC	6 cut(s)	208, 385, 389, 839, 1687, 2041
PpsI	GAGTC	6 cut(s)	208, 385, 389, 839, 1687, 2041
PpuMI	RGGWCCY	1 cut(s)	1264
PscI	ACATGT	1 cut(s)	481
PshBI	ATTAAT	1 cut(s)	1734
Psp124BI	GAGCTC	1 cut(s)	2128
Psp5II	RGGWCCY	1 cut(s)	1264
Psp6I	CCWGG	6 cut(s)	257, 790, 1503, 1537, 1701, 2067
PspEI	GGTNACC	2 cut(s)	642, 785
PspGI	CCWGG	6 cut(s)	257, 790, 1503, 1537, 1701, 2067
PspN4I	GGNNCC	8 cut(s)	16, 373, 632, 826, 1265, 2073, 2159, 2538
PspPI	GGNCC	8 cut(s)	64, 85, 372, 563, 704, 825, 1264, 2536
PspPPI	RGGWCCY	1 cut(s)	1264
PsuI	RGATCY	2 cut(s)	218, 1214
RsaI	GTAC	6 cut(s)	632, 668, 1258, 1592, 1713, 2282
RsaNI	GTAC	6 cut(s)	631, 667, 1257, 1591, 1712, 2281
RseI	CAYNNNNRTG	2 cut(s)	1062, 2349
SacI	GAGCTC	1 cut(s)	2128
SalI	GTCGAC	2 cut(s)	23, 167
SapI	GCTCTTC	1 cut(s)	528
Sau3AI	GATC	6 cut(s)	218, 1121, 1214, 1904, 2268, 2419
Sau96I	GGNCC	8 cut(s)	64, 85, 372, 563, 704, 825, 1264, 2536
SchI	GAGTC	6 cut(s)	209, 386, 389, 839, 1688, 2042
ScrFI	CCNGG	9 cut(s)	216, 259, 431, 585, 792, 1505, 1539, 1703, 2069
SduI	GDGCHC	2 cut(s)	822, 2128
SfaNI	GCATC	8 cut(s)	504, 1205, 1684, 2000, 2188, 2193, 2344, 2366
Sfr274I	CTCGAG	1 cut(s)	1399
SfuI	TTCGAA	2 cut(s)	1930, 2547
SgrAI	CRCCGGYG	1 cut(s)	646
SgrDI	CGTCGACG	1 cut(s)	167
SinI	GGWCC	8 cut(s)	64, 85, 372, 563, 704, 825, 1264, 2536
SlaI	CTCGAG	1 cut(s)	1399
SmiMI	CAYNNNNRTG	2 cut(s)	1062, 2349
SmlI	CTYRAG	3 cut(s)	1343, 1399, 1910
SmoI	CTYRAG	3 cut(s)	1343, 1399, 1910
SspMI	CTAG	4 cut(s)	38, 810, 1314, 1661
SstI	GAGCTC	1 cut(s)	2128
StyD4I	CCNGG	9 cut(s)	214, 257, 429, 583, 790, 1503, 1537, 1701, 2067
StyI	CCWWGG	3 cut(s)	18, 731, 1084
TaaI	ACNGT	5 cut(s)	523, 1048, 1256, 1483, 1875
TaiI	ACGT	3 cut(s)	236, 2263, 2286
TatI	WGTACW	1 cut(s)	1590
TauI	GCSGC	3 cut(s)	37, 107, 2375
TscAI	CASTG	4 cut(s)	1033, 1053, 1069, 2418
TseFI	GTSAC	3 cut(s)	407, 642, 2385
Tsp45I	GTSAC	3 cut(s)	407, 642, 2385
TspDTI	ATGAA	5 cut(s)	546, 1647, 1806, 1814, 2459
TspGWI	ACGGA	3 cut(s)	518, 654, 1729
TspRI	CASTG	4 cut(s)	1033, 1053, 1069, 2418
Van91I	CCANNNNNTGG	1 cut(s)	2167
Vha464I	CTTAAG	1 cut(s)	1910
VpaK11BI	GGWCC	8 cut(s)	64, 85, 372, 563, 704, 825, 1264, 2536
VspI	ATTAAT	1 cut(s)	1734
XagI	CCTNNNNNAGG	1 cut(s)	1271
XapI	RAATTY	5 cut(s)	475, 979, 1899, 2175, 2293
XceI	RCATGY	1 cut(s)	485
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1082
XhoI	CTCGAG	1 cut(s)	1399
XmiI	GTMKAC	3 cut(s)	24, 168, 290
XmnI	GAANNNNTTC	4 cut(s)	1800, 1821, 1874, 1936
XspI	CTAG	4 cut(s)	38, 810, 1314, 1661
Zsp2I	ATGCAT	3 cut(s)	1576, 2208, 2359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.