Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0003833

Physical Location & Seq

Genomic Coordinates Reverse (-)

56909419 .. 56914860

Gene Structure 5442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG370700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGGGCTGTGGTGTCTCCAAAGTAGACGACTTGCCGTTGGTGACTCTCTGCAGGGAGCGGAGGGACTACATCAAAACGGCGTCGGATACCCGCTACGCCCTGGCCGCGGCCCACCTAACTTATTTCCAGTCGCTCAAGCGAATCGGCGACGCGCTTTGCAAGTTCGTTGACGAGGACCTAGTCATCGGCGGGTCGTATTCGCTGCCGGATTCTCCGGTTCTGACATTGCCCTCCGATGAAGGCAAGCCCGGGAAAGGGAAGCCCCAAGGGAAAAGCTCGTCGTCGTCTTCGATTTCACTCTCGCATAGTTTCGAGGACGTTGAAGACTCTCACTTGCACTTATCCGATTCGGATTCTGACTTGGATTCGGGTCATGTCCACATTGAGAGCAGCCCCGAACCGGAGGTACCGTCTTCTTCTTATAATCAGCCTCCGAATTTTGTTTACTCTCCGAATTCATCTGGTGCTGTTTACCCTCCGACTTCGTCCGGTTATGGTTATGACCCGACTTCGTCCGGTTATGGTTATGACCCGACTTCGTCCTTCGGAAATTACCCGAATTCGAATATGTATTACATGAGAAGATCAGAGACGCCGGCGCAGACGTTTTATTATGGAGAGCCGGAGAGATTTCCGGTCCAAAATGGGCCGTCGTCGGATTCTTATTCGGGTCATGGGGGAGGAGGTGGGTTTTTCGGGTTCTCAATGGGCTCACCGGCGGCGAGGGAGGATCCGTATAATGCGCAGCCCGGCCCGCAAAAGCCGGTTCCTCCACGGGAGCCGCCTTCGCCGCCCAAAGCTTCTTCTAGCTGGGATTTCTTCAATGTGTTTGATGGTTATGACAATGGTGGTTACTTGAGTTACTTTCCGGGGAGTAGGTATGGCAATGGGAGCTCGGCGGCGAGTAGTCCTGACTCGAAGGAAGTGAGGGAGAGGGAGGGGATTCCTGATTTGGAGGATGAAACAGAGCAAGAGCAAGAAGTGTTGAAAGAGGTTCGAAAGGAGAAGAAGAAGGCTAATGAGGATAGTGCATTTAGAAGGAATCATGACGCAGGTGAAGGGACTTCTAGGCATAGAAATTTGCAGCAGAATTCGGGTGAAGGGACTTCAAGGGGTGTGCCGAAGCAGACCAGCAGTGAGGGGAGTTCAGGGACAGTTCACTTGCACAGCAGCGACAGTTCACTGCACTCTGTCCATGAGAAAGAGATAAAGAGCAGTCCTGATATAGATATGTCGAAAAGTCCCGAAGAAGAGCATGTGAAGAAAAAGAGGGTGAGCTTTGAGTTTGAGGAGGCATCGACTATGGATGTTGGATCTTCAAAAGGGAGTAGCTTGACCACATTGTCAGTACACGGTACAAGGGATGTTCAGGAGGTTGTGAAGGAGATCAGGGATGAGTTTGAGACTGCCTCTAGCTATGGGAAAGAGGTTGCCATGTTGCTTGAGGTGGGCAAGCTGCCATATCAGTCCAGAGTTGCTGCTCTTAAAGTGATCTTTTCCAGGATCCTGTGCCTTGTAGCACCTTCCACGTTGGCTTCACATCCTCCGTCGAAGCCATCAATCAGAATGTCTTCCAAGATGATCAAGATGGCCAAAGGGTACCATGGAGAGCCTGGGAAAGATCTCAACCTGAAGTCTGGGAACCTCTCATCGACTTTGGAGAAACTTCATGCCTGGGAGAAAAAGCTATACAAAGAAGTAAAGGATGAAGAAAAGCTACGGGTTGTCTATGAAAAGGAGTGCAAGAGATTGAAAAGACTAGATGATCATGGAGCTGAGTCAGCTAAGATTGATGCTGCACAGGCTTCTGTCCGAAAATTGCTTACGAAAATTAATGTTTGTATCAGAGCTGTGGATACCATATCGAGCAGGATACATAAGTTGAGGGATGAAGAATTACTGCCCCAAGTAACGGAATTGATTCATGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

643

Amino Acids

70.5

Weight (kDa)

5.89

Isoelectric Point (pI)

56.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	9.1e-24	Protein of unknown function (DUF630)
DUF632	PF04782	457 - 643	1.7e-55	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21740 AT1G77500
fragaria_vesca	FvH4_2g27210 FvH4_2g27210 FvH4_2g27210 FvH4_2g27210 FvH4_2g27210
malus_domestica	MD08G1161000.v1.1 MD15G1346100.v1.1
prunus_persica	Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1
pyrus_communis	pycom08g13820 pycom15g31020
rosa_chinensis	RchiOBHm_Chr6g0296121
rosa_laevigata	RLG00000011728
rosa_multiflora	Rmu_sc0003139.1_g000046
rosa_roxburghii	Rroxscaffold_1G00036630 Rroxscaffold_7G00171810 Rroxscaffold_7G00178240
rosa_rugosa	Rorug06G0257900 Rorug06G0258000 Rorug06G0258100 Rorug06G0258200
rosa_samantha	Rh6AG370700 Rh6BG378300 Rh6CG383900 Rh6DG370700
rosa_wichuraiana	Rw6G032310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	423
AarI	CACCTGC	1 cut(s)	1043
AasI	GACNNNNNNGTC	1 cut(s)	1342
Acc16I	TGCGCA	1 cut(s)	744
Acc36I	ACCTGC	1 cut(s)	1043
Acc65I	GGTACC	2 cut(s)	406, 1599
AccB1I	GGYRCC	2 cut(s)	406, 1599
AccBSI	CCGCTC	1 cut(s)	58
AccI	GTMKAC	1 cut(s)	24
AccII	CGCG	2 cut(s)	107, 152
AclWI	GGATC	5 cut(s)	725, 738, 1321, 1498, 1511
AcoI	YGGCCR	2 cut(s)	102, 1590
AcsI	RAATTY	5 cut(s)	436, 454, 559, 1078, 1090
AcuI	CTGAAG	1 cut(s)	1652
AcyI	GRCGYC	2 cut(s)	80, 593
AfaI	GTAC	4 cut(s)	408, 1350, 1357, 1601
AfiI	CCNNNNNNNGG	5 cut(s)	106, 254, 255, 400, 1912
AgsI	TTSAA	6 cut(s)	323, 823, 988, 1110, 1320, 1753
AjnI	CCWGG	4 cut(s)	99, 1499, 1612, 1673
Alw21I	GWGCWC	1 cut(s)	896
Alw26I	GTCTC	3 cut(s)	19, 584, 1397
AlwI	GGATC	5 cut(s)	725, 738, 1321, 1498, 1511
Ama87I	CYCGRG	1 cut(s)	248
AoxI	GGCC	5 cut(s)	102, 108, 647, 751, 1590
ApeKI	GCWGC	8 cut(s)	202, 390, 745, 1084, 1170, 1456, 1478, 1796
ApoI	RAATTY	5 cut(s)	436, 454, 559, 1078, 1090
AseI	ATTAAT	1 cut(s)	1833
Asp700I	GAANNNNTTC	2 cut(s)	1570, 1920
Asp718I	GGTACC	2 cut(s)	406, 1599
AspLEI	GCGC	3 cut(s)	154, 601, 745
AspS9I	GGNCC	5 cut(s)	109, 175, 637, 647, 752
AsuC2I	CCSGG	4 cut(s)	249, 250, 750, 870
AsuHPI	GGTGA	5 cut(s)	52, 705, 1067, 1109, 1285
AsuII	TTCGAA	2 cut(s)	563, 997
AvaI	CYCGRG	1 cut(s)	248
AvaII	GGWCC	2 cut(s)	175, 637
BaeI	ACNNNNGTAYC	2 cut(s)	1865, 1898
BalI	TGGCCA	1 cut(s)	1592
BamHI	GGATCC	2 cut(s)	730, 1503
BanI	GGYRCC	2 cut(s)	406, 1599
BanII	GRGCYC	2 cut(s)	713, 896
BarI	GAAGNNNNNNTAC	2 cut(s)	1701, 1733
BbsI	GAAGAC	4 cut(s)	279, 330, 405, 1563
Bbv12I	GWGCWC	1 cut(s)	896
BbvI	GCAGC	8 cut(s)	189, 402, 757, 1096, 1182, 1443, 1465, 1783
BccI	CCATC	3 cut(s)	827, 1564, 1582
BceAI	ACGGC	3 cut(s)	19, 93, 634
BciT130I	CCWGG	4 cut(s)	101, 1501, 1614, 1675
BciVI	GTATCC	3 cut(s)	79, 1849, 1866
BclI	TGATCA	2 cut(s)	1581, 1765
BcnI	CCSGG	4 cut(s)	249, 250, 750, 870
BcoDI	GTCTC	3 cut(s)	19, 584, 1397
BfaI	CTAG	5 cut(s)	179, 807, 1068, 1413, 1760
BfmI	CTRYAG	1 cut(s)	49
BfuAI	ACCTGC	1 cut(s)	1043
BfuI	GTATCC	3 cut(s)	79, 1849, 1866
BglII	AGATCT	1 cut(s)	1621
Bme1390I	CCNGG	8 cut(s)	101, 249, 250, 750, 870, 1501, 1614, 1675
Bme18I	GGWCC	2 cut(s)	175, 637
BmeT110I	CYCGRG	1 cut(s)	248
BmgT120I	GGNCC	5 cut(s)	109, 175, 637, 647, 752
BmiI	GGNNCC	7 cut(s)	408, 732, 768, 780, 1505, 1601, 1643
BmrFI	CCNGG	8 cut(s)	101, 249, 250, 750, 870, 1501, 1614, 1675
BmsI	GCATC	2 cut(s)	1304, 1783
BpiI	GAAGAC	4 cut(s)	279, 330, 405, 1563
BplI	GAGNNNNNCTC	2 cut(s)	1394, 1426
Bpu14I	TTCGAA	2 cut(s)	563, 997
BpuEI	CTTGAG	3 cut(s)	119, 877, 1463
BpuMI	CCSGG	4 cut(s)	249, 250, 750, 870
BsaHI	GRCGYC	2 cut(s)	80, 593
BsaJI	CCNNGG	9 cut(s)	99, 105, 248, 265, 773, 869, 1603, 1613, 1674
BsaWI	WCCGGW	5 cut(s)	214, 400, 488, 515, 634
BsaXI	ACNNNNNCTCC	4 cut(s)	395, 425, 719, 749
Bsc4I	CCNNNNNNNGG	5 cut(s)	106, 254, 255, 400, 1912
Bse118I	RCCGGY	3 cut(s)	595, 715, 763
Bse1I	ACTGG	1 cut(s)	127
Bse3DI	GCAATG	2 cut(s)	224, 892
BseBI	CCWGG	4 cut(s)	101, 1501, 1614, 1675
BseDI	CCNNGG	9 cut(s)	99, 105, 248, 265, 773, 869, 1603, 1613, 1674
BseGI	GGATG	7 cut(s)	964, 1312, 1369, 1399, 1540, 1711, 1894
BseLI	CCNNNNNNNGG	5 cut(s)	106, 254, 255, 400, 1912
BseMI	GCAATG	2 cut(s)	224, 892
BseMII	CTCAG	1 cut(s)	1767
BseNI	ACTGG	1 cut(s)	127
BseRI	GAGGAG	2 cut(s)	696, 1304
BseXI	GCAGC	8 cut(s)	189, 402, 757, 1096, 1182, 1443, 1465, 1783
BseYI	CCCAGC	1 cut(s)	810
BsgI	GTGCAG	2 cut(s)	1169, 1782
Bsh1236I	CGCG	2 cut(s)	107, 152
BshFI	GGCC	5 cut(s)	104, 110, 649, 753, 1592
BshNI	GGYRCC	2 cut(s)	406, 1599
BsiHKAI	GWGCWC	1 cut(s)	896
BsiHKCI	CYCGRG	1 cut(s)	248
BslFI	GGGAC	5 cut(s)	77, 1075, 1117, 1165, 1227
BslI	CCNNNNNNNGG	5 cut(s)	106, 254, 255, 400, 1912
BsmAI	GTCTC	3 cut(s)	19, 584, 1397
BsmBI	CGTCTC	1 cut(s)	584
BsmFI	GGGAC	5 cut(s)	77, 1075, 1117, 1165, 1227
BsnI	GGCC	5 cut(s)	104, 110, 649, 753, 1592
BsoBI	CYCGRG	1 cut(s)	248
Bsp119I	TTCGAA	2 cut(s)	563, 997
Bsp1286I	GDGCHC	2 cut(s)	713, 896
Bsp143I	GATC	9 cut(s)	584, 730, 1313, 1386, 1491, 1503, 1581, 1621, 1765
Bsp19I	CCATGG	1 cut(s)	1603
BspANI	GGCC	5 cut(s)	104, 110, 649, 753, 1592
BspCNI	CTCAG	1 cut(s)	1768
BspFNI	CGCG	2 cut(s)	107, 152
BspHI	TCATGA	1 cut(s)	1045
BspLI	GGNNCC	7 cut(s)	408, 732, 768, 780, 1505, 1601, 1643
BspMAI	CTGCAG	1 cut(s)	53
BspMI	ACCTGC	1 cut(s)	1043
BspPI	GGATC	5 cut(s)	725, 738, 1321, 1498, 1511
BspQI	GCTCTTC	1 cut(s)	1245
BspT104I	TTCGAA	2 cut(s)	563, 997
BspT107I	GGYRCC	2 cut(s)	406, 1599
BsrBI	CCGCTC	1 cut(s)	58
BsrDI	GCAATG	2 cut(s)	224, 892
BsrFI	RCCGGY	3 cut(s)	595, 715, 763
BsrI	ACTGG	1 cut(s)	127
BssAI	RCCGGY	3 cut(s)	595, 715, 763
BssECI	CCNNGG	9 cut(s)	99, 105, 248, 265, 773, 869, 1603, 1613, 1674
BssMI	GATC	9 cut(s)	584, 730, 1313, 1386, 1491, 1503, 1581, 1621, 1765
BssNI	GRCGYC	2 cut(s)	80, 593
BssT1I	CCWWGG	2 cut(s)	265, 1603
Bst2UI	CCWGG	4 cut(s)	101, 1501, 1614, 1675
Bst4CI	ACNGT	4 cut(s)	411, 1156, 1178, 1355
Bst6I	CTCTTC	1 cut(s)	1245
BstACI	GRCGYC	2 cut(s)	80, 593
BstBI	TTCGAA	2 cut(s)	563, 997
BstC8I	GCNNGC	4 cut(s)	245, 597, 755, 1454
BstDEI	CTNAG	2 cut(s)	1776, 1785
BstDSI	CCRYGG	3 cut(s)	105, 773, 1603
BstF5I	GGATG	7 cut(s)	964, 1312, 1369, 1399, 1540, 1711, 1894
BstFNI	CGCG	2 cut(s)	107, 152
BstHHI	GCGC	3 cut(s)	154, 601, 745
BstKTI	GATC	9 cut(s)	587, 733, 1316, 1389, 1494, 1506, 1584, 1624, 1768
BstMAI	GTCTC	3 cut(s)	19, 584, 1397
BstMBI	GATC	9 cut(s)	584, 730, 1313, 1386, 1491, 1503, 1581, 1621, 1765
BstMWI	GCNNNNNNNGC	7 cut(s)	104, 754, 787, 790, 891, 1781, 1802
BstNI	CCWGG	4 cut(s)	101, 1501, 1614, 1675
BstNSI	RCATGY	1 cut(s)	1259
BstSCI	CCNGG	8 cut(s)	99, 247, 248, 748, 868, 1499, 1612, 1673
BstSFI	CTRYAG	1 cut(s)	49
BstUI	CGCG	2 cut(s)	107, 152
BstV1I	GCAGC	8 cut(s)	189, 402, 757, 1096, 1182, 1443, 1465, 1783
BstV2I	GAAGAC	4 cut(s)	279, 330, 405, 1563
BstX2I	RGATCY	4 cut(s)	730, 1313, 1503, 1621
BstYI	RGATCY	4 cut(s)	730, 1313, 1503, 1621
BsuI	GTATCC	3 cut(s)	79, 1849, 1866
BsuRI	GGCC	5 cut(s)	104, 110, 649, 753, 1592
BtgI	CCRYGG	3 cut(s)	105, 773, 1603
BtsCI	GGATG	7 cut(s)	964, 1312, 1369, 1399, 1540, 1711, 1894
BtsI	GCAGTG	2 cut(s)	1141, 1181
BtsIMutI	CAGTG	2 cut(s)	1141, 1181
BveI	ACCTGC	1 cut(s)	1043
Cac8I	GCNNGC	4 cut(s)	245, 597, 755, 1454
CciI	TCATGA	1 cut(s)	1045
CfoI	GCGC	3 cut(s)	154, 601, 745
Cfr10I	RCCGGY	3 cut(s)	595, 715, 763
Cfr13I	GGNCC	5 cut(s)	109, 175, 637, 647, 752
Cfr42I	CCGCGG	1 cut(s)	108
Cfr9I	CCCGGG	1 cut(s)	248
CseI	GACGC	4 cut(s)	69, 158, 601, 1058
Csp6I	GTAC	4 cut(s)	407, 1349, 1356, 1600
CviQI	GTAC	4 cut(s)	407, 1349, 1356, 1600
DdeI	CTNAG	2 cut(s)	1776, 1785
DpnI	GATC	9 cut(s)	586, 732, 1315, 1388, 1493, 1505, 1583, 1623, 1767
DpnII	GATC	9 cut(s)	584, 730, 1313, 1386, 1491, 1503, 1581, 1621, 1765
DrdI	GACNNNNNNGTC	1 cut(s)	1342
DseDI	GACNNNNNNGTC	1 cut(s)	1342
EaeI	YGGCCR	2 cut(s)	102, 1590
Eam1104I	CTCTTC	1 cut(s)	1245
EarI	CTCTTC	1 cut(s)	1245
Ecl136II	GAGCTC	1 cut(s)	894
Eco130I	CCWWGG	2 cut(s)	265, 1603
Eco24I	GRGCYC	2 cut(s)	713, 896
Eco47I	GGWCC	2 cut(s)	175, 637
Eco53kI	GAGCTC	1 cut(s)	894
Eco57I	CTGAAG	1 cut(s)	1652
Eco88I	CYCGRG	1 cut(s)	248
EcoICRI	GAGCTC	1 cut(s)	894
EcoO109I	RGGNCCY	1 cut(s)	175
EcoRI	GAATTC	3 cut(s)	454, 559, 1090
EcoRII	CCWGG	4 cut(s)	99, 1499, 1612, 1673
EcoT14I	CCWWGG	2 cut(s)	265, 1603
EcoT38I	GRGCYC	2 cut(s)	713, 896
ErhI	CCWWGG	2 cut(s)	265, 1603
Esp3I	CGTCTC	1 cut(s)	584
FaqI	GGGAC	5 cut(s)	77, 1075, 1117, 1165, 1227
FauI	CCCGC	3 cut(s)	98, 182, 762
FbaI	TGATCA	2 cut(s)	1581, 1765
FblI	GTMKAC	1 cut(s)	24
FokI	GGATG	7 cut(s)	971, 1319, 1376, 1406, 1527, 1718, 1901
FriOI	GRGCYC	2 cut(s)	713, 896
FspBI	CTAG	5 cut(s)	179, 807, 1068, 1413, 1760
FspI	TGCGCA	1 cut(s)	744
GlaI	GCGC	3 cut(s)	153, 600, 744
GsaI	CCCAGC	1 cut(s)	814
HaeIII	GGCC	5 cut(s)	104, 110, 649, 753, 1592
HgaI	GACGC	4 cut(s)	69, 158, 601, 1058
HhaI	GCGC	3 cut(s)	154, 601, 745
Hin1I	GRCGYC	2 cut(s)	80, 593
Hin6I	GCGC	3 cut(s)	152, 599, 743
HinP1I	GCGC	3 cut(s)	152, 599, 743
HincII	GTYRAC	1 cut(s)	169
HindII	GTYRAC	1 cut(s)	169
HindIII	AAGCTT	1 cut(s)	798
HphI	GGTGA	5 cut(s)	52, 705, 1067, 1109, 1285
Hpy166II	GTNNAC	8 cut(s)	25, 169, 379, 445, 472, 1159, 1181, 1351
Hpy188III	TCNNGA	8 cut(s)	911, 947, 1046, 1220, 1244, 1370, 1470, 1585
Hpy8I	GTNNAC	8 cut(s)	25, 169, 379, 445, 472, 1159, 1181, 1351
Hpy99I	CGWCG	7 cut(s)	85, 152, 283, 286, 655, 658, 1552
HpyCH4III	ACNGT	4 cut(s)	411, 1156, 1178, 1355
HpyCH4IV	ACGT	3 cut(s)	318, 605, 1529
HpyCH4V	TGCA	9 cut(s)	51, 159, 337, 1031, 1084, 1165, 1186, 1743, 1799
HpyF10VI	GCNNNNNNNGC	7 cut(s)	104, 754, 787, 790, 891, 1781, 1802
HpyF3I	CTNAG	2 cut(s)	1776, 1785
HpySE526I	ACGT	3 cut(s)	318, 605, 1529
Hsp92I	GRCGYC	2 cut(s)	80, 593
HspAI	GCGC	3 cut(s)	152, 599, 743
KpnI	GGTACC	2 cut(s)	410, 1603
KroI	GCCGGC	1 cut(s)	595
KroNI	GCCGGC	1 cut(s)	597
Ksp22I	TGATCA	2 cut(s)	1581, 1765
KspI	CCGCGG	1 cut(s)	108
Kzo9I	GATC	9 cut(s)	584, 730, 1313, 1386, 1491, 1503, 1581, 1621, 1765
LguI	GCTCTTC	1 cut(s)	1245
LmnI	GCTCC	4 cut(s)	55, 778, 891, 1772
Lsp1109I	GCAGC	8 cut(s)	189, 402, 757, 1096, 1182, 1443, 1465, 1783
LweI	GCATC	2 cut(s)	1304, 1783
MaeI	CTAG	5 cut(s)	179, 807, 1068, 1413, 1760
MaeII	ACGT	3 cut(s)	318, 605, 1529
MaeIII	GTNAC	4 cut(s)	40, 851, 860, 1909
MalI	GATC	9 cut(s)	586, 732, 1315, 1388, 1493, 1505, 1583, 1623, 1767
MbiI	CCGCTC	1 cut(s)	58
MboI	GATC	9 cut(s)	584, 730, 1313, 1386, 1491, 1503, 1581, 1621, 1765
MflI	RGATCY	4 cut(s)	730, 1313, 1503, 1621
MhlI	GDGCHC	2 cut(s)	713, 896
MlsI	TGGCCA	1 cut(s)	1592
MluNI	TGGCCA	1 cut(s)	1592
MlyI	GAGTC	4 cut(s)	37, 320, 908, 1787
MmeI	TCCRAC	4 cut(s)	63, 503, 636, 1291
Mox20I	TGGCCA	1 cut(s)	1592
MreI	CGCCGGCG	1 cut(s)	595
MroNI	GCCGGC	1 cut(s)	595
MroXI	GAANNNNTTC	2 cut(s)	1570, 1920
MscI	TGGCCA	1 cut(s)	1592
MseI	TTAA	2 cut(s)	1485, 1833
Msp20I	TGGCCA	1 cut(s)	1592
MspA1I	CMGCKG	1 cut(s)	107
MspR9I	CCNGG	8 cut(s)	101, 249, 250, 750, 870, 1501, 1614, 1675
MvaI	CCWGG	4 cut(s)	101, 1501, 1614, 1675
MvnI	CGCG	2 cut(s)	107, 152
MwoI	GCNNNNNNNGC	7 cut(s)	104, 754, 787, 790, 891, 1781, 1802
NaeI	GCCGGC	1 cut(s)	597
NciI	CCSGG	4 cut(s)	249, 250, 750, 870
NcoI	CCATGG	1 cut(s)	1603
NdeII	GATC	9 cut(s)	584, 730, 1313, 1386, 1491, 1503, 1581, 1621, 1765
NgoMIV	GCCGGC	1 cut(s)	595
NlaIV	GGNNCC	7 cut(s)	408, 732, 768, 780, 1505, 1601, 1643
NmeAIII	GCCGAG	1 cut(s)	875
NmuCI	GTSAC	1 cut(s)	40
NsbI	TGCGCA	1 cut(s)	744
NspI	RCATGY	1 cut(s)	1259
NspV	TTCGAA	2 cut(s)	563, 997
PagI	TCATGA	1 cut(s)	1045
PaqCI	CACCTGC	1 cut(s)	1043
PciSI	GCTCTTC	1 cut(s)	1245
PcsI	WCGNNNNNNNCGW	1 cut(s)	287
PdiI	GCCGGC	1 cut(s)	597
PdmI	GAANNNNTTC	2 cut(s)	1570, 1920
PfeI	GAWTC	9 cut(s)	141, 209, 347, 353, 365, 659, 943, 1042, 1921
PflFI	GACNNNGTC	4 cut(s)	179, 484, 511, 538
PfoI	TCCNGGA	1 cut(s)	1499
PleI	GAGTC	4 cut(s)	37, 320, 908, 1786
PpsI	GAGTC	4 cut(s)	37, 320, 908, 1786
PpuMI	RGGWCCY	1 cut(s)	175
PshBI	ATTAAT	1 cut(s)	1833
PsiI	TTATAA	1 cut(s)	423
Psp124BI	GAGCTC	1 cut(s)	896
Psp5II	RGGWCCY	1 cut(s)	175
Psp6I	CCWGG	4 cut(s)	99, 1499, 1612, 1673
PspFI	CCCAGC	1 cut(s)	810
PspGI	CCWGG	4 cut(s)	99, 1499, 1612, 1673
PspN4I	GGNNCC	7 cut(s)	408, 732, 768, 780, 1505, 1601, 1643
PspPI	GGNCC	5 cut(s)	109, 175, 637, 647, 752
PspPPI	RGGWCCY	1 cut(s)	175
PsrI	GAACNNNNNNTAC	2 cut(s)	390, 422
PstI	CTGCAG	1 cut(s)	53
PsuI	RGATCY	4 cut(s)	730, 1313, 1503, 1621
PsyI	GACNNNGTC	4 cut(s)	179, 484, 511, 538
RsaI	GTAC	4 cut(s)	408, 1350, 1357, 1601
RsaNI	GTAC	4 cut(s)	407, 1349, 1356, 1600
SacI	GAGCTC	1 cut(s)	896
SacII	CCGCGG	1 cut(s)	108
SapI	GCTCTTC	1 cut(s)	1245
SaqAI	TTAA	2 cut(s)	1485, 1833
Sau3AI	GATC	9 cut(s)	584, 730, 1313, 1386, 1491, 1503, 1581, 1621, 1765
Sau96I	GGNCC	5 cut(s)	109, 175, 637, 647, 752
SchI	GAGTC	4 cut(s)	37, 320, 908, 1787
ScrFI	CCNGG	8 cut(s)	101, 249, 250, 750, 870, 1501, 1614, 1675
SduI	GDGCHC	2 cut(s)	713, 896
SfaNI	GCATC	2 cut(s)	1304, 1783
SfcI	CTRYAG	1 cut(s)	49
Sfr303I	CCGCGG	1 cut(s)	108
SfuI	TTCGAA	2 cut(s)	563, 997
SgrAI	CRCCGGYG	2 cut(s)	595, 715
SgrBI	CCGCGG	1 cut(s)	108
SinI	GGWCC	2 cut(s)	175, 637
SmaI	CCCGGG	1 cut(s)	250
SmlI	CTYRAG	3 cut(s)	134, 856, 1442
SmoI	CTYRAG	3 cut(s)	134, 856, 1442
SspMI	CTAG	5 cut(s)	179, 807, 1068, 1413, 1760
SstI	GAGCTC	1 cut(s)	896
StyD4I	CCNGG	8 cut(s)	99, 247, 248, 748, 868, 1499, 1612, 1673
StyI	CCWWGG	2 cut(s)	265, 1603
TaaI	ACNGT	4 cut(s)	411, 1156, 1178, 1355
TaiI	ACGT	3 cut(s)	321, 608, 1532
TatI	WGTACW	1 cut(s)	1348
TauI	GCSGC	6 cut(s)	107, 110, 722, 784, 793, 902
TfiI	GAWTC	9 cut(s)	141, 209, 347, 353, 365, 659, 943, 1042, 1921
Tru1I	TTAA	2 cut(s)	1485, 1833
Tru9I	TTAA	2 cut(s)	1485, 1833
TscAI	CASTG	2 cut(s)	1141, 1188
TseFI	GTSAC	1 cut(s)	40
TseI	GCWGC	8 cut(s)	202, 390, 745, 1084, 1170, 1456, 1478, 1796
Tsp45I	GTSAC	1 cut(s)	40
TspDTI	ATGAA	8 cut(s)	252, 447, 975, 1658, 1722, 1746, 1905, 1913
TspGWI	ACGGA	3 cut(s)	723, 1536, 1928
TspMI	CCCGGG	1 cut(s)	248
TspRI	CASTG	2 cut(s)	1141, 1188
Tth111I	GACNNNGTC	4 cut(s)	179, 484, 511, 538
VpaK11BI	GGWCC	2 cut(s)	175, 637
VspI	ATTAAT	1 cut(s)	1833
XapI	RAATTY	5 cut(s)	436, 454, 559, 1078, 1090
XceI	RCATGY	1 cut(s)	1259
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1610
XmaI	CCCGGG	1 cut(s)	248
XmiI	GTMKAC	1 cut(s)	24
XmnI	GAANNNNTTC	2 cut(s)	1570, 1920
XspI	CTAG	5 cut(s)	179, 807, 1068, 1413, 1760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.