Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003833

Physical Location & Seq

Genomic Coordinates Reverse (-)

60712362 .. 60718522

Gene Structure 6161 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG378300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGGGCTGTGGTGTCTCCAAAGTAGACGACTTGCCGTTGGTGACTCTCTGCAGGGAGCGGAGGGACTACATCAAAACGGCGTCGGATACCCGCTACGCCCTGGCCGCGGCCCACCTAACTTATTTCCAGTCGCTCAAGCAAATCGGCGACGCGCTTTGCAAGTTCGTTGACGAGGACCTAGTCATCGGCGGCGCCGGCGGGTCGTATTCGCTGCCGGATTCTCCGGTTCTGACATTGCCCTCCGACGAAGGCAAGCCCGGGAAAGGGAAAAGCTCGTCGTCGTCTTCGATTTCACTCTCGCATAGTTTCGAGGACGTTGAAGACTCTCACTTGCATTTATCCGATTCGGATTCTGACTTGGATTCGGGTCATATCCACATTGAGAGCAGCCCCGAACCGGAGGTACCGTCTTCTTCTTATAATCAGCCTCCGAATTTTGTTTACTCTCCGAATTCATCTGGTGCTGTTTACCCTCCCGATTCCTCTGGTTATGGTTATGACCCGAATTTGTCCGGTTATGGTTATGACCCGACTTCGTCCTCTGGAAATTACCCGAATTCGAATATGTATTACATGAGAAGATCAGAGACGCCGGCGCAGACGTTTTATTATGGAGAGCCGGAGAGATTTCCGGTCCAAAATGGGCCGTCGTCGGATTCCTATTCGGGTTATGGGGGAGGTGGGTTTTTCGGGTCCTCAATGGGCTCACCGGCGGCGAGGGAGGATCCGTATAATGCGCAGCTCGGCCCGCAAAAGTCGGGTCCTCCACGGGAGCCGCCTTCGCCGCCCAAAGCTTCTTCTAGCTGGGATTTCTTCAATGTGTTTGATGGTTATGACAATGGTGGTTACTTGAGTTACTTTCCGGGGAGTAGGTATGGGAATGGGAGCTCGGCGGCGAGTAGTCCTGACTCGAAGGAAGTGAGGGAGAGGGAGGGGATTCCTGATTTGGAGGATGAAACAGAGCAAGAGCAAGAAGTGTTGAAAGAGGTTCGAAAGGAGAAGAAGAAGGCTAATGAGGATAGTGCATTTAGAAGGAATCATGACGCAGGTGAAGGGACTTCTAGGCATAGAAATTTGCAGCAGAATTCGGGTGAAGGGACTTCAAGGGGTGTGCCGAAGCAGACCAGCAGTGAGGGGAGTTCAGGGACAGTTCACTTGCACAGCAGCGAGAGTTCACTGCACTCTGTCCATGAGAAAGAGATAAAGAGCAGTCCTGATATAGATATGTCGAAAAGTCCCGAAGAAGAGCATGTGAAGAAAAAGAGGGTGAGCTTTGAGTTTGAGGAGGCATCGACTATGGATGTTGGATCTTCAAAAGGGAGTAGTTTGACCACATTGTCAGTACACGGTACAAGGGACGTTCAGGAGGTTGTGAAGGAGATCAGGGATGAGTTTGAGACTGCCTCTAGCTATGGGAAAGAGGTTGCCATGTTGCTTGAGGTGGGCAAGCTGCCTTATCAGTCCAGAGTTGCTGCTCTTAAAGTGATCTTTTCCAGGATCCTGTGCCTTGTAGCACCTTCCACGTTGGCTTCACATCCTCCGTCGAAGCCATCAATCAGAATGTCTTCCAAGATGATCAAGATGGCCAAAGGGTACCATGTTGAGCCTGGGAAAGATTTCAACCTGAAGTCTGGGAACCTCTCATCGACTTTGGAGAAACTTCATGCCTGGGAGAAAAAGCTATACAAAGAAGTTAAGGATGAAGAAAAGCTACGGGTTGTCTATGAAAAGGAGTGCAAGAGATTGAAAAGACTAGATGATCATGGAGCTGAGTCAGCTAAGATTGATGCCGCACAGGCTTCTGTCCGAAAATTGCTTACGAAAATTAATGTTTGTATCAGAGCTGTGGATACCATATCGAGCAGGATACATAAGTTGAGGGATGAAGAATTACTGCCCCAAGTAACGGAATTGATTCATGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

641

Amino Acids

70.21

Weight (kDa)

5.69

Isoelectric Point (pI)

57.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	9.9e-24	Protein of unknown function (DUF630)
DUF632	PF04782	455 - 641	1e-55	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21740 AT1G77500
fragaria_vesca	FvH4_2g27210 FvH4_2g27210 FvH4_2g27210 FvH4_2g27210 FvH4_2g27210
malus_domestica	MD08G1161000.v1.1 MD15G1346100.v1.1
prunus_persica	Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1
pyrus_communis	pycom08g13820 pycom15g31020
rosa_chinensis	RchiOBHm_Chr6g0296121
rosa_laevigata	RLG00000011728
rosa_multiflora	Rmu_sc0003139.1_g000046
rosa_roxburghii	Rroxscaffold_1G00036630 Rroxscaffold_7G00171810 Rroxscaffold_7G00178240
rosa_rugosa	Rorug06G0257900 Rorug06G0258000 Rorug06G0258100 Rorug06G0258200
rosa_samantha	Rh6AG370700 Rh6BG378300 Rh6CG383900 Rh6DG370700
rosa_wichuraiana	Rw6G032310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	420
AarI	CACCTGC	1 cut(s)	1037
AasI	GACNNNNNNGTC	1 cut(s)	1336
Acc16I	TGCGCA	1 cut(s)	738
Acc36I	ACCTGC	1 cut(s)	1037
Acc65I	GGTACC	2 cut(s)	403, 1593
AccB1I	GGYRCC	3 cut(s)	191, 403, 1593
AccBSI	CCGCTC	1 cut(s)	58
AccI	GTMKAC	1 cut(s)	24
AccII	CGCG	2 cut(s)	107, 152
AclWI	GGATC	5 cut(s)	719, 732, 1315, 1492, 1505
AcoI	YGGCCR	2 cut(s)	102, 1584
AcsI	RAATTY	6 cut(s)	433, 451, 505, 556, 1072, 1084
AcuI	CTGAAG	1 cut(s)	1646
AcyI	GRCGYC	3 cut(s)	80, 192, 590
AfaI	GTAC	4 cut(s)	405, 1344, 1351, 1595
AfiI	CCNNNNNNNGG	5 cut(s)	106, 263, 264, 397, 1906
AgsI	TTSAA	7 cut(s)	320, 817, 982, 1104, 1314, 1621, 1747
AjnI	CCWGG	4 cut(s)	99, 1493, 1606, 1667
Alw21I	GWGCWC	1 cut(s)	890
Alw26I	GTCTC	3 cut(s)	19, 581, 1391
AlwI	GGATC	5 cut(s)	719, 732, 1315, 1492, 1505
Ama87I	CYCGRG	1 cut(s)	257
AoxI	GGCC	5 cut(s)	102, 108, 644, 745, 1584
ApeKI	GCWGC	7 cut(s)	211, 387, 739, 1078, 1164, 1450, 1472
ApoI	RAATTY	6 cut(s)	433, 451, 505, 556, 1072, 1084
ArsI	GACNNNNNNTTYG	2 cut(s)	745, 777
AseI	ATTAAT	1 cut(s)	1827
Asp700I	GAANNNNTTC	3 cut(s)	1564, 1616, 1914
Asp718I	GGTACC	2 cut(s)	403, 1593
AspLEI	GCGC	4 cut(s)	154, 194, 598, 739
AspS9I	GGNCC	7 cut(s)	109, 175, 634, 644, 693, 746, 761
AsuC2I	CCSGG	3 cut(s)	258, 259, 864
AsuHPI	GGTGA	5 cut(s)	52, 699, 1061, 1103, 1279
AsuII	TTCGAA	2 cut(s)	560, 991
AvaI	CYCGRG	1 cut(s)	257
AvaII	GGWCC	4 cut(s)	175, 634, 693, 761
BaeI	ACNNNNGTAYC	2 cut(s)	1859, 1892
BalI	TGGCCA	1 cut(s)	1586
BamHI	GGATCC	2 cut(s)	724, 1497
BanI	GGYRCC	3 cut(s)	191, 403, 1593
BanII	GRGCYC	2 cut(s)	707, 890
BarI	GAAGNNNNNNTAC	2 cut(s)	1695, 1727
BbsI	GAAGAC	4 cut(s)	276, 327, 402, 1557
Bbv12I	GWGCWC	1 cut(s)	890
BbvI	GCAGC	7 cut(s)	198, 399, 751, 1090, 1176, 1437, 1459
BccI	CCATC	3 cut(s)	821, 1558, 1576
BceAI	ACGGC	3 cut(s)	19, 93, 631
BciT130I	CCWGG	4 cut(s)	101, 1495, 1608, 1669
BciVI	GTATCC	3 cut(s)	79, 1843, 1860
BclI	TGATCA	2 cut(s)	1575, 1759
BcnI	CCSGG	3 cut(s)	258, 259, 864
BcoDI	GTCTC	3 cut(s)	19, 581, 1391
BfaI	CTAG	5 cut(s)	179, 801, 1062, 1407, 1754
BfmI	CTRYAG	1 cut(s)	49
BfoI	RGCGCY	1 cut(s)	195
BfuAI	ACCTGC	1 cut(s)	1037
BfuI	GTATCC	3 cut(s)	79, 1843, 1860
BglI	GCCNNNNNGGC	1 cut(s)	1796
Bme1390I	CCNGG	7 cut(s)	101, 258, 259, 864, 1495, 1608, 1669
Bme18I	GGWCC	4 cut(s)	175, 634, 693, 761
BmeT110I	CYCGRG	1 cut(s)	257
BmgT120I	GGNCC	7 cut(s)	109, 175, 634, 644, 693, 746, 761
BmiI	GGNNCC	9 cut(s)	193, 405, 694, 726, 762, 774, 1499, 1595, 1637
BmrFI	CCNGG	7 cut(s)	101, 258, 259, 864, 1495, 1608, 1669
BmsI	GCATC	2 cut(s)	1298, 1777
BpiI	GAAGAC	4 cut(s)	276, 327, 402, 1557
BplI	GAGNNNNNCTC	2 cut(s)	1388, 1420
Bpu14I	TTCGAA	2 cut(s)	560, 991
BpuEI	CTTGAG	3 cut(s)	119, 871, 1457
BpuMI	CCSGG	3 cut(s)	258, 259, 864
BsaHI	GRCGYC	3 cut(s)	80, 192, 590
BsaJI	CCNNGG	7 cut(s)	99, 105, 257, 767, 863, 1607, 1668
BsaWI	WCCGGW	4 cut(s)	223, 397, 512, 631
BsaXI	ACNNNNNCTCC	4 cut(s)	392, 422, 713, 743
Bsc4I	CCNNNNNNNGG	5 cut(s)	106, 263, 264, 397, 1906
Bse118I	RCCGGY	3 cut(s)	194, 592, 709
Bse1I	ACTGG	1 cut(s)	127
Bse3DI	GCAATG	1 cut(s)	233
BseBI	CCWGG	4 cut(s)	101, 1495, 1608, 1669
BseDI	CCNNGG	7 cut(s)	99, 105, 257, 767, 863, 1607, 1668
BseGI	GGATG	6 cut(s)	958, 1306, 1393, 1534, 1705, 1888
BseLI	CCNNNNNNNGG	5 cut(s)	106, 263, 264, 397, 1906
BseMI	GCAATG	1 cut(s)	233
BseMII	CTCAG	1 cut(s)	1761
BseNI	ACTGG	1 cut(s)	127
BseRI	GAGGAG	1 cut(s)	1298
BseXI	GCAGC	7 cut(s)	198, 399, 751, 1090, 1176, 1437, 1459
BseYI	CCCAGC	1 cut(s)	804
BsgI	GTGCAG	1 cut(s)	1163
Bsh1236I	CGCG	2 cut(s)	107, 152
BshFI	GGCC	5 cut(s)	104, 110, 646, 747, 1586
BshNI	GGYRCC	3 cut(s)	191, 403, 1593
BsiHKAI	GWGCWC	1 cut(s)	890
BsiHKCI	CYCGRG	1 cut(s)	257
BslFI	GGGAC	6 cut(s)	77, 1069, 1111, 1159, 1221, 1370
BslI	CCNNNNNNNGG	5 cut(s)	106, 263, 264, 397, 1906
BsmAI	GTCTC	3 cut(s)	19, 581, 1391
BsmBI	CGTCTC	1 cut(s)	581
BsmFI	GGGAC	6 cut(s)	77, 1069, 1111, 1159, 1221, 1370
BsnI	GGCC	5 cut(s)	104, 110, 646, 747, 1586
BsoBI	CYCGRG	1 cut(s)	257
Bsp119I	TTCGAA	2 cut(s)	560, 991
Bsp1286I	GDGCHC	2 cut(s)	707, 890
Bsp143I	GATC	8 cut(s)	581, 724, 1307, 1380, 1485, 1497, 1575, 1759
BspANI	GGCC	5 cut(s)	104, 110, 646, 747, 1586
BspCNI	CTCAG	1 cut(s)	1762
BspFNI	CGCG	2 cut(s)	107, 152
BspHI	TCATGA	1 cut(s)	1039
BspLI	GGNNCC	9 cut(s)	193, 405, 694, 726, 762, 774, 1499, 1595, 1637
BspMAI	CTGCAG	1 cut(s)	53
BspMI	ACCTGC	1 cut(s)	1037
BspPI	GGATC	5 cut(s)	719, 732, 1315, 1492, 1505
BspQI	GCTCTTC	1 cut(s)	1239
BspT104I	TTCGAA	2 cut(s)	560, 991
BspT107I	GGYRCC	3 cut(s)	191, 403, 1593
BsrBI	CCGCTC	1 cut(s)	58
BsrDI	GCAATG	1 cut(s)	233
BsrFI	RCCGGY	3 cut(s)	194, 592, 709
BsrI	ACTGG	1 cut(s)	127
BssAI	RCCGGY	3 cut(s)	194, 592, 709
BssECI	CCNNGG	7 cut(s)	99, 105, 257, 767, 863, 1607, 1668
BssMI	GATC	8 cut(s)	581, 724, 1307, 1380, 1485, 1497, 1575, 1759
BssNI	GRCGYC	3 cut(s)	80, 192, 590
Bst2UI	CCWGG	4 cut(s)	101, 1495, 1608, 1669
Bst4CI	ACNGT	3 cut(s)	408, 1150, 1349
Bst6I	CTCTTC	1 cut(s)	1239
BstACI	GRCGYC	3 cut(s)	80, 192, 590
BstBI	TTCGAA	2 cut(s)	560, 991
BstC8I	GCNNGC	5 cut(s)	196, 254, 594, 749, 1448
BstDEI	CTNAG	2 cut(s)	1770, 1779
BstDSI	CCRYGG	2 cut(s)	105, 767
BstF5I	GGATG	6 cut(s)	958, 1306, 1393, 1534, 1705, 1888
BstFNI	CGCG	2 cut(s)	107, 152
BstH2I	RGCGCY	1 cut(s)	195
BstHHI	GCGC	4 cut(s)	154, 194, 598, 739
BstKTI	GATC	8 cut(s)	584, 727, 1310, 1383, 1488, 1500, 1578, 1762
BstMAI	GTCTC	3 cut(s)	19, 581, 1391
BstMBI	GATC	8 cut(s)	581, 724, 1307, 1380, 1485, 1497, 1575, 1759
BstMWI	GCNNNNNNNGC	7 cut(s)	104, 195, 748, 781, 784, 1775, 1796
BstNI	CCWGG	4 cut(s)	101, 1495, 1608, 1669
BstNSI	RCATGY	1 cut(s)	1253
BstSCI	CCNGG	7 cut(s)	99, 256, 257, 862, 1493, 1606, 1667
BstSFI	CTRYAG	1 cut(s)	49
BstUI	CGCG	2 cut(s)	107, 152
BstV1I	GCAGC	7 cut(s)	198, 399, 751, 1090, 1176, 1437, 1459
BstV2I	GAAGAC	4 cut(s)	276, 327, 402, 1557
BstX2I	RGATCY	3 cut(s)	724, 1307, 1497
BstYI	RGATCY	3 cut(s)	724, 1307, 1497
BsuI	GTATCC	3 cut(s)	79, 1843, 1860
BsuRI	GGCC	5 cut(s)	104, 110, 646, 747, 1586
BtgI	CCRYGG	2 cut(s)	105, 767
BtsCI	GGATG	6 cut(s)	958, 1306, 1393, 1534, 1705, 1888
BtsI	GCAGTG	2 cut(s)	1135, 1175
BtsIMutI	CAGTG	2 cut(s)	1135, 1175
BveI	ACCTGC	1 cut(s)	1037
Cac8I	GCNNGC	5 cut(s)	196, 254, 594, 749, 1448
CciI	TCATGA	1 cut(s)	1039
CfoI	GCGC	4 cut(s)	154, 194, 598, 739
Cfr10I	RCCGGY	3 cut(s)	194, 592, 709
Cfr13I	GGNCC	7 cut(s)	109, 175, 634, 644, 693, 746, 761
Cfr42I	CCGCGG	1 cut(s)	108
Cfr9I	CCCGGG	1 cut(s)	257
CseI	GACGC	4 cut(s)	69, 158, 598, 1052
Csp6I	GTAC	4 cut(s)	404, 1343, 1350, 1594
CviAII	CATG	9 cut(s)	574, 1040, 1190, 1250, 1429, 1598, 1664, 1763, 1919
CviQI	GTAC	4 cut(s)	404, 1343, 1350, 1594
DdeI	CTNAG	2 cut(s)	1770, 1779
DinI	GGCGCC	1 cut(s)	193
DpnI	GATC	8 cut(s)	583, 726, 1309, 1382, 1487, 1499, 1577, 1761
DpnII	GATC	8 cut(s)	581, 724, 1307, 1380, 1485, 1497, 1575, 1759
DrdI	GACNNNNNNGTC	1 cut(s)	1336
DseDI	GACNNNNNNGTC	1 cut(s)	1336
EaeI	YGGCCR	2 cut(s)	102, 1584
Eam1104I	CTCTTC	1 cut(s)	1239
EarI	CTCTTC	1 cut(s)	1239
Ecl136II	GAGCTC	1 cut(s)	888
Eco24I	GRGCYC	2 cut(s)	707, 890
Eco47I	GGWCC	4 cut(s)	175, 634, 693, 761
Eco53kI	GAGCTC	1 cut(s)	888
Eco57I	CTGAAG	1 cut(s)	1646
Eco88I	CYCGRG	1 cut(s)	257
EcoICRI	GAGCTC	1 cut(s)	888
EcoO109I	RGGNCCY	3 cut(s)	175, 693, 761
EcoRI	GAATTC	3 cut(s)	451, 556, 1084
EcoRII	CCWGG	4 cut(s)	99, 1493, 1606, 1667
EcoT38I	GRGCYC	2 cut(s)	707, 890
EgeI	GGCGCC	1 cut(s)	193
EheI	GGCGCC	1 cut(s)	193
Esp3I	CGTCTC	1 cut(s)	581
FaeI	CATG	9 cut(s)	577, 1043, 1193, 1253, 1432, 1601, 1667, 1766, 1922
FaqI	GGGAC	6 cut(s)	77, 1069, 1111, 1159, 1221, 1370
FatI	CATG	9 cut(s)	573, 1039, 1189, 1249, 1428, 1597, 1663, 1762, 1918
FauI	CCCGC	3 cut(s)	98, 191, 756
FbaI	TGATCA	2 cut(s)	1575, 1759
FblI	GTMKAC	1 cut(s)	24
FokI	GGATG	6 cut(s)	965, 1313, 1400, 1521, 1712, 1895
FriOI	GRGCYC	2 cut(s)	707, 890
FspBI	CTAG	5 cut(s)	179, 801, 1062, 1407, 1754
FspI	TGCGCA	1 cut(s)	738
GlaI	GCGC	4 cut(s)	153, 193, 597, 738
GsaI	CCCAGC	1 cut(s)	808
HaeII	RGCGCY	1 cut(s)	195
HaeIII	GGCC	5 cut(s)	104, 110, 646, 747, 1586
HgaI	GACGC	4 cut(s)	69, 158, 598, 1052
HhaI	GCGC	4 cut(s)	154, 194, 598, 739
Hin1I	GRCGYC	3 cut(s)	80, 192, 590
Hin1II	CATG	9 cut(s)	577, 1043, 1193, 1253, 1432, 1601, 1667, 1766, 1922
Hin6I	GCGC	4 cut(s)	152, 192, 596, 737
HinP1I	GCGC	4 cut(s)	152, 192, 596, 737
HincII	GTYRAC	1 cut(s)	169
HindII	GTYRAC	1 cut(s)	169
HindIII	AAGCTT	1 cut(s)	792
HphI	GGTGA	5 cut(s)	52, 699, 1061, 1103, 1279
Hpy166II	GTNNAC	7 cut(s)	25, 169, 442, 469, 1153, 1175, 1345
Hpy8I	GTNNAC	7 cut(s)	25, 169, 442, 469, 1153, 1175, 1345
Hpy99I	CGWCG	8 cut(s)	85, 152, 248, 280, 283, 652, 655, 1546
HpyAV	CCTTC	9 cut(s)	242, 789, 907, 1000, 1026, 1046, 1088, 1369, 1527
HpyCH4III	ACNGT	3 cut(s)	408, 1150, 1349
HpyCH4IV	ACGT	4 cut(s)	315, 602, 1359, 1523
HpyCH4V	TGCA	8 cut(s)	51, 159, 334, 1025, 1078, 1159, 1180, 1737
HpyF10VI	GCNNNNNNNGC	7 cut(s)	104, 195, 748, 781, 784, 1775, 1796
HpyF3I	CTNAG	2 cut(s)	1770, 1779
HpySE526I	ACGT	4 cut(s)	315, 602, 1359, 1523
Hsp92I	GRCGYC	3 cut(s)	80, 192, 590
Hsp92II	CATG	9 cut(s)	577, 1043, 1193, 1253, 1432, 1601, 1667, 1766, 1922
HspAI	GCGC	4 cut(s)	152, 192, 596, 737
KasI	GGCGCC	1 cut(s)	191
KpnI	GGTACC	2 cut(s)	407, 1597
KroI	GCCGGC	2 cut(s)	194, 592
KroNI	GCCGGC	2 cut(s)	196, 594
Ksp22I	TGATCA	2 cut(s)	1575, 1759
KspI	CCGCGG	1 cut(s)	108
Kzo9I	GATC	8 cut(s)	581, 724, 1307, 1380, 1485, 1497, 1575, 1759
LguI	GCTCTTC	1 cut(s)	1239
LmnI	GCTCC	4 cut(s)	55, 772, 885, 1766
Lsp1109I	GCAGC	7 cut(s)	198, 399, 751, 1090, 1176, 1437, 1459
LweI	GCATC	2 cut(s)	1298, 1777
MaeI	CTAG	5 cut(s)	179, 801, 1062, 1407, 1754
MaeII	ACGT	4 cut(s)	315, 602, 1359, 1523
MaeIII	GTNAC	4 cut(s)	40, 845, 854, 1903
MalI	GATC	8 cut(s)	583, 726, 1309, 1382, 1487, 1499, 1577, 1761
MbiI	CCGCTC	1 cut(s)	58
MboI	GATC	8 cut(s)	581, 724, 1307, 1380, 1485, 1497, 1575, 1759
MflI	RGATCY	3 cut(s)	724, 1307, 1497
MhlI	GDGCHC	2 cut(s)	707, 890
MlsI	TGGCCA	1 cut(s)	1586
MluNI	TGGCCA	1 cut(s)	1586
Mly113I	GGCGCC	1 cut(s)	192
MlyI	GAGTC	4 cut(s)	37, 317, 902, 1781
MmeI	TCCRAC	4 cut(s)	63, 267, 633, 1285
Mox20I	TGGCCA	1 cut(s)	1586
MreI	CGCCGGCG	2 cut(s)	194, 592
MroNI	GCCGGC	2 cut(s)	194, 592
MroXI	GAANNNNTTC	3 cut(s)	1564, 1616, 1914
MscI	TGGCCA	1 cut(s)	1586
MseI	TTAA	3 cut(s)	1479, 1695, 1827
Msp20I	TGGCCA	1 cut(s)	1586
MspA1I	CMGCKG	1 cut(s)	107
MspR9I	CCNGG	7 cut(s)	101, 258, 259, 864, 1495, 1608, 1669
MvaI	CCWGG	4 cut(s)	101, 1495, 1608, 1669
MvnI	CGCG	2 cut(s)	107, 152
MwoI	GCNNNNNNNGC	7 cut(s)	104, 195, 748, 781, 784, 1775, 1796
NaeI	GCCGGC	2 cut(s)	196, 594
NarI	GGCGCC	1 cut(s)	192
NciI	CCSGG	3 cut(s)	258, 259, 864
NdeII	GATC	8 cut(s)	581, 724, 1307, 1380, 1485, 1497, 1575, 1759
NgoMIV	GCCGGC	2 cut(s)	194, 592
NlaIII	CATG	9 cut(s)	577, 1043, 1193, 1253, 1432, 1601, 1667, 1766, 1922
NlaIV	GGNNCC	9 cut(s)	193, 405, 694, 726, 762, 774, 1499, 1595, 1637
NmeAIII	GCCGAG	2 cut(s)	723, 869
NmuCI	GTSAC	1 cut(s)	40
NsbI	TGCGCA	1 cut(s)	738
NspI	RCATGY	1 cut(s)	1253
NspV	TTCGAA	2 cut(s)	560, 991
PagI	TCATGA	1 cut(s)	1039
PaqCI	CACCTGC	1 cut(s)	1037
PciSI	GCTCTTC	1 cut(s)	1239
PcsI	WCGNNNNNNNCGW	1 cut(s)	284
PdiI	GCCGGC	2 cut(s)	196, 594
PdmI	GAANNNNTTC	3 cut(s)	1564, 1616, 1914
PfeI	GAWTC	9 cut(s)	218, 344, 350, 362, 479, 656, 937, 1036, 1915
PflFI	GACNNNGTC	2 cut(s)	179, 535
PfoI	TCCNGGA	1 cut(s)	1493
PleI	GAGTC	4 cut(s)	37, 317, 902, 1780
PluTI	GGCGCC	1 cut(s)	195
PpsI	GAGTC	4 cut(s)	37, 317, 902, 1780
PpuMI	RGGWCCY	3 cut(s)	175, 693, 761
PshBI	ATTAAT	1 cut(s)	1827
PsiI	TTATAA	1 cut(s)	420
Psp124BI	GAGCTC	1 cut(s)	890
Psp5II	RGGWCCY	3 cut(s)	175, 693, 761
Psp6I	CCWGG	4 cut(s)	99, 1493, 1606, 1667
PspFI	CCCAGC	1 cut(s)	804
PspGI	CCWGG	4 cut(s)	99, 1493, 1606, 1667
PspN4I	GGNNCC	9 cut(s)	193, 405, 694, 726, 762, 774, 1499, 1595, 1637
PspPI	GGNCC	7 cut(s)	109, 175, 634, 644, 693, 746, 761
PspPPI	RGGWCCY	3 cut(s)	175, 693, 761
PsrI	GAACNNNNNNTAC	2 cut(s)	387, 419
PstI	CTGCAG	1 cut(s)	53
PsuI	RGATCY	3 cut(s)	724, 1307, 1497
PsyI	GACNNNGTC	2 cut(s)	179, 535
RsaI	GTAC	4 cut(s)	405, 1344, 1351, 1595
RsaNI	GTAC	4 cut(s)	404, 1343, 1350, 1594
SacI	GAGCTC	1 cut(s)	890
SacII	CCGCGG	1 cut(s)	108
SapI	GCTCTTC	1 cut(s)	1239
SaqAI	TTAA	3 cut(s)	1479, 1695, 1827
Sau3AI	GATC	8 cut(s)	581, 724, 1307, 1380, 1485, 1497, 1575, 1759
Sau96I	GGNCC	7 cut(s)	109, 175, 634, 644, 693, 746, 761
SchI	GAGTC	4 cut(s)	37, 317, 902, 1781
ScrFI	CCNGG	7 cut(s)	101, 258, 259, 864, 1495, 1608, 1669
SduI	GDGCHC	2 cut(s)	707, 890
SfaNI	GCATC	2 cut(s)	1298, 1777
SfcI	CTRYAG	1 cut(s)	49
SfoI	GGCGCC	1 cut(s)	193
Sfr303I	CCGCGG	1 cut(s)	108
SfuI	TTCGAA	2 cut(s)	560, 991
SgrAI	CRCCGGYG	3 cut(s)	194, 592, 709
SgrBI	CCGCGG	1 cut(s)	108
SinI	GGWCC	4 cut(s)	175, 634, 693, 761
SmaI	CCCGGG	1 cut(s)	259
SmlI	CTYRAG	3 cut(s)	134, 850, 1436
SmoI	CTYRAG	3 cut(s)	134, 850, 1436
SspDI	GGCGCC	1 cut(s)	191
SspMI	CTAG	5 cut(s)	179, 801, 1062, 1407, 1754
SstI	GAGCTC	1 cut(s)	890
StyD4I	CCNGG	7 cut(s)	99, 256, 257, 862, 1493, 1606, 1667
TaaI	ACNGT	3 cut(s)	408, 1150, 1349
TaiI	ACGT	4 cut(s)	318, 605, 1362, 1526
TatI	WGTACW	1 cut(s)	1342
TauI	GCSGC	8 cut(s)	107, 110, 192, 716, 778, 787, 896, 1793
TfiI	GAWTC	9 cut(s)	218, 344, 350, 362, 479, 656, 937, 1036, 1915
Tru1I	TTAA	3 cut(s)	1479, 1695, 1827
Tru9I	TTAA	3 cut(s)	1479, 1695, 1827
TscAI	CASTG	2 cut(s)	1135, 1182
TseFI	GTSAC	1 cut(s)	40
TseI	GCWGC	7 cut(s)	211, 387, 739, 1078, 1164, 1450, 1472
Tsp45I	GTSAC	1 cut(s)	40
TspDTI	ATGAA	7 cut(s)	444, 969, 1652, 1716, 1740, 1899, 1907
TspGWI	ACGGA	3 cut(s)	717, 1530, 1922
TspMI	CCCGGG	1 cut(s)	257
TspRI	CASTG	2 cut(s)	1135, 1182
Tth111I	GACNNNGTC	2 cut(s)	179, 535
VpaK11BI	GGWCC	4 cut(s)	175, 634, 693, 761
VspI	ATTAAT	1 cut(s)	1827
XapI	RAATTY	6 cut(s)	433, 451, 505, 556, 1072, 1084
XceI	RCATGY	1 cut(s)	1253
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1604
XmaI	CCCGGG	1 cut(s)	257
XmiI	GTMKAC	1 cut(s)	24
XmnI	GAANNNNTTC	3 cut(s)	1564, 1616, 1914
XspI	CTAG	5 cut(s)	179, 801, 1062, 1407, 1754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.