Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0003833

Physical Location & Seq

Genomic Coordinates Reverse (-)

57065152 .. 57070917

Gene Structure 5766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG383900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGGGCTGTGGTGTCTCCAAAGTAGACGACTTGCCGTTGGTGACTCTCTGCAGGGAGCGGAGGGACTACATCAAAACGGCGTCGGATACCCGCTACGCCCTGGCCGCGGCCCACCTAACTTATTTCCAGTCGCTCAAGCGAATCGGCGACGCGCTTTGCAAGTTCGTTGACGAGGACCTAGTCATCGGCGGGTCGTATTCGCTGCCGGATTCTCCGGTTCTGACATTGCCCTCCGACGAAGGCAAGCCCGGGAAAGGGAAGCCCCAAGGGAAAAGCTCGTCGTCGTCTTCGATTTCACTCTCGCATAGTTTCGAGGACGTTGAAGACTCTCACTTGCACTTATCCGATTCGGATTCTGACTTGGATTCGGGTCATGTCCACATTGAGAGCAGCCCCGAACCGGAGGTACCGTCTTCTTCTTATAATCAGCCTCCGAATTTTGTTTACTCTCCGAATTCATCTGGTGCTGTTTACCCTCCCAATTCCTCTGGTTATGGTTATGACCCGACTTCGTCCGGTTATGGTTATGACCCGACTTCGTCCTTTGGAAATTACCCGAATTCGAATATGTATTACATGAGAAGATCAGAGACGCCGGCGCAGACGTTTTATTATGGAGAGCCGGAGAGATTTCCGGTCCAAAATGGGCCGTCGTCGGATTCTTATTCCGGTTATGGGGGAGGTGGGTTTTTCGGGTTCTCAATGGGCTCACCGGCGGCGAGGGAGGATCCGTATAATGCGCAGCCCGGCCCGCAAAAGCCGGGTCCTCCACGGGAGCCGCCTTCGCCGCCCAAAGCTTCTTCTAGCTGGGATTTCTTCAATGTGTTTGATGGTTATGACAATGGTGGTTACTTGAGTTACTTTCCGGGGAGTAGGACTGGGAATGGGAGCTCGGCGGCGAGTAGTCCTGACTCGAAGGAAGTGAGGGAGAGGGAGGGGATTCCTGATTTGGAGGATGAAACAGAGCAAGAGCAGGAAGTGTTGAAAGAGGTTCGAAAGGAGAAGAAGAAGGCTAATGAGGATAGTGCATTTAGAAGGAATCATGACGCAGGTGAAGGGACTTCTAGGCATAGAAATTTGCAGCAGAATTCGGGTGAAGGGACTTCAAGGGGTGTGCCGAAGCAGACCAGCAGTGAGGGGAGTTCAGGGACAGTTCACTTGCACAGCAGCGAGAGTTCACTGCACTCTGTCCATGAGAAAGAGATAAAGAGCAGTCCTGATATAGATATGTCAAAAAGTCCTGAAGAAGAGCATGTGAAGAAAAAGAGGGTGAGCTTTGAGTTTGAGGAGGCATCGACTATGGATGTTGGATCTTCAAAAGGGAGTAGCTTGACCACATTGTCAGTACACAGTACAAGGGACGTTCAGGAGGTTGTGAAGGAGATCAGGGATGAGTTTGAAACTGCCTCTAGCTATGGGAAAGAGGTTGCCATGTTGCTTGAGGTGGGCAAGCTGCCATATCAGTCCAGAGTTGCTGCTCTTAAAGTGATCTTTTCCAGGATCCTGTGCCTTGTAGCACCTTCCACGTTGGCTTCACATCCTCCGTCGAAGCCATCAATCAGAATGTCTTCCAAGATGATCAAGATGGCCAAAGGGTACCATGGAGAGCCTGGGAAAGATTTCAACCTGAAGTCTGGGAACCTCTCATCGACTTTGGAGAAACTTCATGCCTGGGAGAAAAAGCTATACAAAGAAGTTAAGGATGAAGAAAAGCTACGGGTTGTCTATGAAAAGGAGTGCAAGAGATTGAAAAGACTAGATGATCATGGAGCTGAGTCAGCTAAGATTGATGCCGCACAGGCTTCTGTTCGAAAATTGCTTACGAAAATTAATGTTTGTATCAGAGCTGTGGATACCATATCGAGCAGGATACATAAGTTGAGGGATGAAGAATTACTGCCCCAAGTAACGGAATTGATTCATGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

642

Amino Acids

70.45

Weight (kDa)

5.86

Isoelectric Point (pI)

56.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	9.1e-24	Protein of unknown function (DUF630)
DUF632	PF04782	456 - 642	6.2e-56	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21740 AT1G77500
fragaria_vesca	FvH4_2g27210 FvH4_2g27210 FvH4_2g27210 FvH4_2g27210 FvH4_2g27210
malus_domestica	MD08G1161000.v1.1 MD15G1346100.v1.1
prunus_persica	Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1
pyrus_communis	pycom08g13820 pycom15g31020
rosa_chinensis	RchiOBHm_Chr6g0296121
rosa_laevigata	RLG00000011728
rosa_multiflora	Rmu_sc0003139.1_g000046
rosa_roxburghii	Rroxscaffold_1G00036630 Rroxscaffold_7G00171810 Rroxscaffold_7G00178240
rosa_rugosa	Rorug06G0257900 Rorug06G0258000 Rorug06G0258100 Rorug06G0258200
rosa_samantha	Rh6AG370700 Rh6BG378300 Rh6CG383900 Rh6DG370700
rosa_wichuraiana	Rw6G032310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	423
AarI	CACCTGC	1 cut(s)	1040
AasI	GACNNNNNNGTC	1 cut(s)	1339
Acc16I	TGCGCA	1 cut(s)	741
Acc36I	ACCTGC	1 cut(s)	1040
Acc65I	GGTACC	2 cut(s)	406, 1596
AccB1I	GGYRCC	2 cut(s)	406, 1596
AccBSI	CCGCTC	1 cut(s)	58
AccI	GTMKAC	1 cut(s)	24
AccII	CGCG	2 cut(s)	107, 152
AclWI	GGATC	5 cut(s)	722, 735, 1318, 1495, 1508
AcoI	YGGCCR	2 cut(s)	102, 1587
AcsI	RAATTY	5 cut(s)	436, 454, 559, 1075, 1087
AcuI	CTGAAG	2 cut(s)	1263, 1649
AcyI	GRCGYC	2 cut(s)	80, 593
AfaI	GTAC	4 cut(s)	408, 1347, 1354, 1598
AfiI	CCNNNNNNNGG	6 cut(s)	106, 254, 255, 400, 675, 1909
AgsI	TTSAA	8 cut(s)	323, 820, 985, 1107, 1317, 1400, 1624, 1750
AjnI	CCWGG	4 cut(s)	99, 1496, 1609, 1670
Alw21I	GWGCWC	1 cut(s)	893
Alw26I	GTCTC	2 cut(s)	19, 584
AlwI	GGATC	5 cut(s)	722, 735, 1318, 1495, 1508
Ama87I	CYCGRG	1 cut(s)	248
AoxI	GGCC	5 cut(s)	102, 108, 647, 748, 1587
ApeKI	GCWGC	7 cut(s)	202, 390, 742, 1081, 1167, 1453, 1475
ApoI	RAATTY	5 cut(s)	436, 454, 559, 1075, 1087
ArsI	GACNNNNNNTTYG	2 cut(s)	748, 780
AseI	ATTAAT	1 cut(s)	1830
Asp700I	GAANNNNTTC	3 cut(s)	1567, 1619, 1917
Asp718I	GGTACC	2 cut(s)	406, 1596
AspLEI	GCGC	3 cut(s)	154, 601, 742
AspS9I	GGNCC	6 cut(s)	109, 175, 637, 647, 749, 764
AsuC2I	CCSGG	5 cut(s)	249, 250, 747, 762, 867
AsuHPI	GGTGA	5 cut(s)	52, 702, 1064, 1106, 1282
AsuII	TTCGAA	3 cut(s)	563, 994, 1810
AvaI	CYCGRG	1 cut(s)	248
AvaII	GGWCC	3 cut(s)	175, 637, 764
BaeI	ACNNNNGTAYC	2 cut(s)	1862, 1895
BalI	TGGCCA	1 cut(s)	1589
BamHI	GGATCC	2 cut(s)	727, 1500
BanI	GGYRCC	2 cut(s)	406, 1596
BanII	GRGCYC	2 cut(s)	710, 893
BarI	GAAGNNNNNNTAC	2 cut(s)	1698, 1730
BbsI	GAAGAC	4 cut(s)	279, 330, 405, 1560
Bbv12I	GWGCWC	1 cut(s)	893
BbvI	GCAGC	7 cut(s)	189, 402, 754, 1093, 1179, 1440, 1462
BccI	CCATC	3 cut(s)	824, 1561, 1579
BceAI	ACGGC	3 cut(s)	19, 93, 634
BciT130I	CCWGG	4 cut(s)	101, 1498, 1611, 1672
BciVI	GTATCC	3 cut(s)	79, 1846, 1863
BclI	TGATCA	2 cut(s)	1578, 1762
BcnI	CCSGG	5 cut(s)	249, 250, 747, 762, 867
BcoDI	GTCTC	2 cut(s)	19, 584
BfaI	CTAG	5 cut(s)	179, 804, 1065, 1410, 1757
BfmI	CTRYAG	1 cut(s)	49
BfuAI	ACCTGC	1 cut(s)	1040
BfuI	GTATCC	3 cut(s)	79, 1846, 1863
BglI	GCCNNNNNGGC	1 cut(s)	1799
Bme1390I	CCNGG	9 cut(s)	101, 249, 250, 747, 762, 867, 1498, 1611, 1672
Bme18I	GGWCC	3 cut(s)	175, 637, 764
BmeT110I	CYCGRG	1 cut(s)	248
BmgT120I	GGNCC	6 cut(s)	109, 175, 637, 647, 749, 764
BmiI	GGNNCC	7 cut(s)	408, 729, 765, 777, 1502, 1598, 1640
BmrFI	CCNGG	9 cut(s)	101, 249, 250, 747, 762, 867, 1498, 1611, 1672
BmrI	ACTGGG	1 cut(s)	888
BmsI	GCATC	2 cut(s)	1301, 1780
BmuI	ACTGGG	1 cut(s)	888
BpiI	GAAGAC	4 cut(s)	279, 330, 405, 1560
Bpu14I	TTCGAA	3 cut(s)	563, 994, 1810
BpuEI	CTTGAG	3 cut(s)	119, 874, 1460
BpuMI	CCSGG	5 cut(s)	249, 250, 747, 762, 867
BsaHI	GRCGYC	2 cut(s)	80, 593
BsaJI	CCNNGG	9 cut(s)	99, 105, 248, 265, 770, 866, 1600, 1610, 1671
BsaWI	WCCGGW	5 cut(s)	214, 400, 515, 634, 668
BsaXI	ACNNNNNCTCC	4 cut(s)	395, 425, 716, 746
Bsc4I	CCNNNNNNNGG	6 cut(s)	106, 254, 255, 400, 675, 1909
Bse118I	RCCGGY	2 cut(s)	595, 712
Bse1I	ACTGG	2 cut(s)	127, 883
Bse3DI	GCAATG	1 cut(s)	224
BseBI	CCWGG	4 cut(s)	101, 1498, 1611, 1672
BseDI	CCNNGG	9 cut(s)	99, 105, 248, 265, 770, 866, 1600, 1610, 1671
BseGI	GGATG	6 cut(s)	961, 1309, 1396, 1537, 1708, 1891
BseLI	CCNNNNNNNGG	6 cut(s)	106, 254, 255, 400, 675, 1909
BseMI	GCAATG	1 cut(s)	224
BseMII	CTCAG	1 cut(s)	1764
BseNI	ACTGG	2 cut(s)	127, 883
BseRI	GAGGAG	1 cut(s)	1301
BseXI	GCAGC	7 cut(s)	189, 402, 754, 1093, 1179, 1440, 1462
BseYI	CCCAGC	1 cut(s)	807
BsgI	GTGCAG	1 cut(s)	1166
Bsh1236I	CGCG	2 cut(s)	107, 152
BshFI	GGCC	5 cut(s)	104, 110, 649, 750, 1589
BshNI	GGYRCC	2 cut(s)	406, 1596
BsiHKAI	GWGCWC	1 cut(s)	893
BsiHKCI	CYCGRG	1 cut(s)	248
BslFI	GGGAC	5 cut(s)	77, 1072, 1114, 1162, 1373
BslI	CCNNNNNNNGG	6 cut(s)	106, 254, 255, 400, 675, 1909
BsmAI	GTCTC	2 cut(s)	19, 584
BsmBI	CGTCTC	1 cut(s)	584
BsmFI	GGGAC	5 cut(s)	77, 1072, 1114, 1162, 1373
BsnI	GGCC	5 cut(s)	104, 110, 649, 750, 1589
BsoBI	CYCGRG	1 cut(s)	248
Bsp119I	TTCGAA	3 cut(s)	563, 994, 1810
Bsp1286I	GDGCHC	2 cut(s)	710, 893
Bsp143I	GATC	8 cut(s)	584, 727, 1310, 1383, 1488, 1500, 1578, 1762
Bsp19I	CCATGG	1 cut(s)	1600
BspANI	GGCC	5 cut(s)	104, 110, 649, 750, 1589
BspCNI	CTCAG	1 cut(s)	1765
BspFNI	CGCG	2 cut(s)	107, 152
BspHI	TCATGA	1 cut(s)	1042
BspLI	GGNNCC	7 cut(s)	408, 729, 765, 777, 1502, 1598, 1640
BspMAI	CTGCAG	1 cut(s)	53
BspMI	ACCTGC	1 cut(s)	1040
BspPI	GGATC	5 cut(s)	722, 735, 1318, 1495, 1508
BspQI	GCTCTTC	1 cut(s)	1242
BspT104I	TTCGAA	3 cut(s)	563, 994, 1810
BspT107I	GGYRCC	2 cut(s)	406, 1596
BsrBI	CCGCTC	1 cut(s)	58
BsrDI	GCAATG	1 cut(s)	224
BsrFI	RCCGGY	2 cut(s)	595, 712
BsrI	ACTGG	2 cut(s)	127, 883
BssAI	RCCGGY	2 cut(s)	595, 712
BssECI	CCNNGG	9 cut(s)	99, 105, 248, 265, 770, 866, 1600, 1610, 1671
BssMI	GATC	8 cut(s)	584, 727, 1310, 1383, 1488, 1500, 1578, 1762
BssNI	GRCGYC	2 cut(s)	80, 593
BssT1I	CCWWGG	2 cut(s)	265, 1600
Bst2UI	CCWGG	4 cut(s)	101, 1498, 1611, 1672
Bst4CI	ACNGT	3 cut(s)	411, 1153, 1352
Bst6I	CTCTTC	1 cut(s)	1242
BstACI	GRCGYC	2 cut(s)	80, 593
BstBI	TTCGAA	3 cut(s)	563, 994, 1810
BstC8I	GCNNGC	4 cut(s)	245, 597, 752, 1451
BstDEI	CTNAG	2 cut(s)	1773, 1782
BstDSI	CCRYGG	3 cut(s)	105, 770, 1600
BstF5I	GGATG	6 cut(s)	961, 1309, 1396, 1537, 1708, 1891
BstFNI	CGCG	2 cut(s)	107, 152
BstHHI	GCGC	3 cut(s)	154, 601, 742
BstKTI	GATC	8 cut(s)	587, 730, 1313, 1386, 1491, 1503, 1581, 1765
BstMAI	GTCTC	2 cut(s)	19, 584
BstMBI	GATC	8 cut(s)	584, 727, 1310, 1383, 1488, 1500, 1578, 1762
BstMWI	GCNNNNNNNGC	6 cut(s)	104, 751, 784, 787, 1778, 1799
BstNI	CCWGG	4 cut(s)	101, 1498, 1611, 1672
BstNSI	RCATGY	1 cut(s)	1256
BstSCI	CCNGG	9 cut(s)	99, 247, 248, 745, 760, 865, 1496, 1609, 1670
BstSFI	CTRYAG	1 cut(s)	49
BstUI	CGCG	2 cut(s)	107, 152
BstV1I	GCAGC	7 cut(s)	189, 402, 754, 1093, 1179, 1440, 1462
BstV2I	GAAGAC	4 cut(s)	279, 330, 405, 1560
BstX2I	RGATCY	3 cut(s)	727, 1310, 1500
BstYI	RGATCY	3 cut(s)	727, 1310, 1500
BsuI	GTATCC	3 cut(s)	79, 1846, 1863
BsuRI	GGCC	5 cut(s)	104, 110, 649, 750, 1589
BtgI	CCRYGG	3 cut(s)	105, 770, 1600
BtsCI	GGATG	6 cut(s)	961, 1309, 1396, 1537, 1708, 1891
BtsI	GCAGTG	2 cut(s)	1138, 1178
BtsIMutI	CAGTG	2 cut(s)	1138, 1178
BveI	ACCTGC	1 cut(s)	1040
Cac8I	GCNNGC	4 cut(s)	245, 597, 752, 1451
CciI	TCATGA	1 cut(s)	1042
CfoI	GCGC	3 cut(s)	154, 601, 742
Cfr10I	RCCGGY	2 cut(s)	595, 712
Cfr13I	GGNCC	6 cut(s)	109, 175, 637, 647, 749, 764
Cfr42I	CCGCGG	1 cut(s)	108
Cfr9I	CCCGGG	1 cut(s)	248
CseI	GACGC	4 cut(s)	69, 158, 601, 1055
Csp6I	GTAC	4 cut(s)	407, 1346, 1353, 1597
CviQI	GTAC	4 cut(s)	407, 1346, 1353, 1597
DdeI	CTNAG	2 cut(s)	1773, 1782
DpnI	GATC	8 cut(s)	586, 729, 1312, 1385, 1490, 1502, 1580, 1764
DpnII	GATC	8 cut(s)	584, 727, 1310, 1383, 1488, 1500, 1578, 1762
DrdI	GACNNNNNNGTC	1 cut(s)	1339
DseDI	GACNNNNNNGTC	1 cut(s)	1339
EaeI	YGGCCR	2 cut(s)	102, 1587
Eam1104I	CTCTTC	1 cut(s)	1242
EarI	CTCTTC	1 cut(s)	1242
Ecl136II	GAGCTC	1 cut(s)	891
Eco130I	CCWWGG	2 cut(s)	265, 1600
Eco24I	GRGCYC	2 cut(s)	710, 893
Eco47I	GGWCC	3 cut(s)	175, 637, 764
Eco53kI	GAGCTC	1 cut(s)	891
Eco57I	CTGAAG	2 cut(s)	1263, 1649
Eco88I	CYCGRG	1 cut(s)	248
EcoICRI	GAGCTC	1 cut(s)	891
EcoO109I	RGGNCCY	2 cut(s)	175, 764
EcoRI	GAATTC	3 cut(s)	454, 559, 1087
EcoRII	CCWGG	4 cut(s)	99, 1496, 1609, 1670
EcoT14I	CCWWGG	2 cut(s)	265, 1600
EcoT38I	GRGCYC	2 cut(s)	710, 893
ErhI	CCWWGG	2 cut(s)	265, 1600
Esp3I	CGTCTC	1 cut(s)	584
FaqI	GGGAC	5 cut(s)	77, 1072, 1114, 1162, 1373
FauI	CCCGC	3 cut(s)	98, 182, 759
FbaI	TGATCA	2 cut(s)	1578, 1762
FblI	GTMKAC	1 cut(s)	24
FokI	GGATG	6 cut(s)	968, 1316, 1403, 1524, 1715, 1898
FriOI	GRGCYC	2 cut(s)	710, 893
FspBI	CTAG	5 cut(s)	179, 804, 1065, 1410, 1757
FspI	TGCGCA	1 cut(s)	741
GlaI	GCGC	3 cut(s)	153, 600, 741
GsaI	CCCAGC	1 cut(s)	811
HaeIII	GGCC	5 cut(s)	104, 110, 649, 750, 1589
HgaI	GACGC	4 cut(s)	69, 158, 601, 1055
HhaI	GCGC	3 cut(s)	154, 601, 742
Hin1I	GRCGYC	2 cut(s)	80, 593
Hin6I	GCGC	3 cut(s)	152, 599, 740
HinP1I	GCGC	3 cut(s)	152, 599, 740
HincII	GTYRAC	1 cut(s)	169
HindII	GTYRAC	1 cut(s)	169
HindIII	AAGCTT	1 cut(s)	795
HphI	GGTGA	5 cut(s)	52, 702, 1064, 1106, 1282
Hpy166II	GTNNAC	8 cut(s)	25, 169, 379, 445, 472, 1156, 1178, 1348
Hpy188III	TCNNGA	8 cut(s)	908, 944, 1043, 1217, 1241, 1367, 1467, 1582
Hpy8I	GTNNAC	8 cut(s)	25, 169, 379, 445, 472, 1156, 1178, 1348
Hpy99I	CGWCG	8 cut(s)	85, 152, 239, 283, 286, 655, 658, 1549
HpyAV	CCTTC	9 cut(s)	233, 792, 910, 1003, 1029, 1049, 1091, 1372, 1530
HpyCH4III	ACNGT	3 cut(s)	411, 1153, 1352
HpyCH4IV	ACGT	4 cut(s)	318, 605, 1362, 1526
HpyCH4V	TGCA	8 cut(s)	51, 159, 337, 1028, 1081, 1162, 1183, 1740
HpyF10VI	GCNNNNNNNGC	6 cut(s)	104, 751, 784, 787, 1778, 1799
HpyF3I	CTNAG	2 cut(s)	1773, 1782
HpySE526I	ACGT	4 cut(s)	318, 605, 1362, 1526
Hsp92I	GRCGYC	2 cut(s)	80, 593
HspAI	GCGC	3 cut(s)	152, 599, 740
KpnI	GGTACC	2 cut(s)	410, 1600
KroI	GCCGGC	1 cut(s)	595
KroNI	GCCGGC	1 cut(s)	597
Ksp22I	TGATCA	2 cut(s)	1578, 1762
KspI	CCGCGG	1 cut(s)	108
Kzo9I	GATC	8 cut(s)	584, 727, 1310, 1383, 1488, 1500, 1578, 1762
LguI	GCTCTTC	1 cut(s)	1242
LmnI	GCTCC	4 cut(s)	55, 775, 888, 1769
Lsp1109I	GCAGC	7 cut(s)	189, 402, 754, 1093, 1179, 1440, 1462
LweI	GCATC	2 cut(s)	1301, 1780
MaeI	CTAG	5 cut(s)	179, 804, 1065, 1410, 1757
MaeII	ACGT	4 cut(s)	318, 605, 1362, 1526
MaeIII	GTNAC	4 cut(s)	40, 848, 857, 1906
MalI	GATC	8 cut(s)	586, 729, 1312, 1385, 1490, 1502, 1580, 1764
MbiI	CCGCTC	1 cut(s)	58
MboI	GATC	8 cut(s)	584, 727, 1310, 1383, 1488, 1500, 1578, 1762
MflI	RGATCY	3 cut(s)	727, 1310, 1500
MhlI	GDGCHC	2 cut(s)	710, 893
MlsI	TGGCCA	1 cut(s)	1589
MluNI	TGGCCA	1 cut(s)	1589
MlyI	GAGTC	4 cut(s)	37, 320, 905, 1784
MmeI	TCCRAC	4 cut(s)	63, 258, 636, 1288
Mox20I	TGGCCA	1 cut(s)	1589
MreI	CGCCGGCG	1 cut(s)	595
MroNI	GCCGGC	1 cut(s)	595
MroXI	GAANNNNTTC	3 cut(s)	1567, 1619, 1917
MscI	TGGCCA	1 cut(s)	1589
MseI	TTAA	3 cut(s)	1482, 1698, 1830
Msp20I	TGGCCA	1 cut(s)	1589
MspA1I	CMGCKG	1 cut(s)	107
MspR9I	CCNGG	9 cut(s)	101, 249, 250, 747, 762, 867, 1498, 1611, 1672
MvaI	CCWGG	4 cut(s)	101, 1498, 1611, 1672
MvnI	CGCG	2 cut(s)	107, 152
MwoI	GCNNNNNNNGC	6 cut(s)	104, 751, 784, 787, 1778, 1799
NaeI	GCCGGC	1 cut(s)	597
NciI	CCSGG	5 cut(s)	249, 250, 747, 762, 867
NcoI	CCATGG	1 cut(s)	1600
NdeII	GATC	8 cut(s)	584, 727, 1310, 1383, 1488, 1500, 1578, 1762
NgoMIV	GCCGGC	1 cut(s)	595
NlaIV	GGNNCC	7 cut(s)	408, 729, 765, 777, 1502, 1598, 1640
NmeAIII	GCCGAG	1 cut(s)	872
NmuCI	GTSAC	1 cut(s)	40
NsbI	TGCGCA	1 cut(s)	741
NspI	RCATGY	1 cut(s)	1256
NspV	TTCGAA	3 cut(s)	563, 994, 1810
PagI	TCATGA	1 cut(s)	1042
PaqCI	CACCTGC	1 cut(s)	1040
PciSI	GCTCTTC	1 cut(s)	1242
PcsI	WCGNNNNNNNCGW	1 cut(s)	287
PdiI	GCCGGC	1 cut(s)	597
PdmI	GAANNNNTTC	3 cut(s)	1567, 1619, 1917
PfeI	GAWTC	9 cut(s)	141, 209, 347, 353, 365, 659, 940, 1039, 1918
PflFI	GACNNNGTC	3 cut(s)	179, 511, 538
PfoI	TCCNGGA	1 cut(s)	1496
PleI	GAGTC	4 cut(s)	37, 320, 905, 1783
PpsI	GAGTC	4 cut(s)	37, 320, 905, 1783
PpuMI	RGGWCCY	2 cut(s)	175, 764
PshBI	ATTAAT	1 cut(s)	1830
PsiI	TTATAA	1 cut(s)	423
Psp124BI	GAGCTC	1 cut(s)	893
Psp5II	RGGWCCY	2 cut(s)	175, 764
Psp6I	CCWGG	4 cut(s)	99, 1496, 1609, 1670
PspFI	CCCAGC	1 cut(s)	807
PspGI	CCWGG	4 cut(s)	99, 1496, 1609, 1670
PspN4I	GGNNCC	7 cut(s)	408, 729, 765, 777, 1502, 1598, 1640
PspPI	GGNCC	6 cut(s)	109, 175, 637, 647, 749, 764
PspPPI	RGGWCCY	2 cut(s)	175, 764
PsrI	GAACNNNNNNTAC	2 cut(s)	390, 422
PstI	CTGCAG	1 cut(s)	53
PsuI	RGATCY	3 cut(s)	727, 1310, 1500
PsyI	GACNNNGTC	3 cut(s)	179, 511, 538
RsaI	GTAC	4 cut(s)	408, 1347, 1354, 1598
RsaNI	GTAC	4 cut(s)	407, 1346, 1353, 1597
SacI	GAGCTC	1 cut(s)	893
SacII	CCGCGG	1 cut(s)	108
SapI	GCTCTTC	1 cut(s)	1242
SaqAI	TTAA	3 cut(s)	1482, 1698, 1830
Sau3AI	GATC	8 cut(s)	584, 727, 1310, 1383, 1488, 1500, 1578, 1762
Sau96I	GGNCC	6 cut(s)	109, 175, 637, 647, 749, 764
SchI	GAGTC	4 cut(s)	37, 320, 905, 1784
ScrFI	CCNGG	9 cut(s)	101, 249, 250, 747, 762, 867, 1498, 1611, 1672
SduI	GDGCHC	2 cut(s)	710, 893
SfaNI	GCATC	2 cut(s)	1301, 1780
SfcI	CTRYAG	1 cut(s)	49
Sfr303I	CCGCGG	1 cut(s)	108
SfuI	TTCGAA	3 cut(s)	563, 994, 1810
SgrAI	CRCCGGYG	2 cut(s)	595, 712
SgrBI	CCGCGG	1 cut(s)	108
SinI	GGWCC	3 cut(s)	175, 637, 764
SmaI	CCCGGG	1 cut(s)	250
SmlI	CTYRAG	3 cut(s)	134, 853, 1439
SmoI	CTYRAG	3 cut(s)	134, 853, 1439
SspMI	CTAG	5 cut(s)	179, 804, 1065, 1410, 1757
SstI	GAGCTC	1 cut(s)	893
StyD4I	CCNGG	9 cut(s)	99, 247, 248, 745, 760, 865, 1496, 1609, 1670
StyI	CCWWGG	2 cut(s)	265, 1600
TaaI	ACNGT	3 cut(s)	411, 1153, 1352
TaiI	ACGT	4 cut(s)	321, 608, 1365, 1529
TatI	WGTACW	2 cut(s)	1345, 1352
TauI	GCSGC	7 cut(s)	107, 110, 719, 781, 790, 899, 1796
TfiI	GAWTC	9 cut(s)	141, 209, 347, 353, 365, 659, 940, 1039, 1918
Tru1I	TTAA	3 cut(s)	1482, 1698, 1830
Tru9I	TTAA	3 cut(s)	1482, 1698, 1830
TscAI	CASTG	2 cut(s)	1138, 1185
TseFI	GTSAC	1 cut(s)	40
TseI	GCWGC	7 cut(s)	202, 390, 742, 1081, 1167, 1453, 1475
Tsp45I	GTSAC	1 cut(s)	40
TspDTI	ATGAA	7 cut(s)	447, 972, 1655, 1719, 1743, 1902, 1910
TspGWI	ACGGA	3 cut(s)	720, 1533, 1925
TspMI	CCCGGG	1 cut(s)	248
TspRI	CASTG	2 cut(s)	1138, 1185
Tth111I	GACNNNGTC	3 cut(s)	179, 511, 538
VpaK11BI	GGWCC	3 cut(s)	175, 637, 764
VspI	ATTAAT	1 cut(s)	1830
XapI	RAATTY	5 cut(s)	436, 454, 559, 1075, 1087
XceI	RCATGY	1 cut(s)	1256
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1607
XmaI	CCCGGG	1 cut(s)	248
XmiI	GTMKAC	1 cut(s)	24
XmnI	GAANNNNTTC	3 cut(s)	1567, 1619, 1917
XspI	CTAG	5 cut(s)	179, 804, 1065, 1410, 1757

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.