Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003139.1

Orthogroup ID

OG0003833

Physical Location & Seq

Genomic Coordinates Reverse (-)

189145 .. 193361

Gene Structure 4217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003139.1_g000046.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

atgggctgtggtgtctccaaagtagacgacttgccgttggtgactctctgcagggagcggagggactacatcaaaacggcgtcggatacccgctacgccctggccgcggcccacttaacttatttccagtcgctcaagcgaatcggcgacgcgctttgcaagttcgtcgacgaggacctagtcatcggcggcgccggcgggtcgtattcgctgccggattctccggttctgacactgccctccgacgaaggcaagcccgggaaagggaagccccaagggaaaagctcgtcgtcgtcttcgatttcactctcgcatagtttcgaggacgttgaagactctcacttgcacttatccgattcggattctgacttggattcgggtcatgtccacattgagagcagccccgaaccggaggtaccgtcttcttcttataatcagcctccgaattttgtttactctccgaattcatctggtgctgtttaccctcccaattcctccggttatggttatgacccgacttcgtccggttatggttatgacccgacttcgtccttcggaaattacccgaattcgaatatgtattacatgagaagatcagagacgccggcgcagacgttttattatggagagccggagagatttccggtccaaaatgggccgtcgtcggattcttattcgggtcatgggggaggaggtgggtttttcgggttctcaatgggctcaccggcggcgagggaggatccgtataatgcgcagcccggcccgcaaaagccgggtcctccacgggagccgccttcgccgcccaaagcttcttctagctgggatttcttcaatgtgtttgatggttatgacaatggtggttacttgagttactttccggggagtaggtatgggaatgggagctcggcggcgagtagtcctgactcgaaggaagtgagggagagggaggggattcctgatttggaggatgaaacagagcaagagcaagaagtgttgaaagaggttcgaaaggagaagaagaaggctaatgaggatagtgcatttagaaggaatcatgacgcaggtgaagggacttctaggcatagaaatttgcagcagaattcgggtgaagggacttcaaggggtgtgccgaagcagaccagcagtgaggggagttcagggacagttcacttgcacagcagcgagagttcactgcactctgtccatgagaaagagataaagagcagtcctgatatagatatgtcgaaaagtcccgaagaagagcatgtgaagaaaaagagggtgagctttgagtttgaggaggcatcgactatggatgttggatcttcaaaagggagtagcttgaccacattgtcagtacacggtacaagggatgttcaggaggttgtgaaggagatcagggatgagtttgagactgcctctagctatgggaaagaggttgccatgttgcttgaggtgggcaagctgccatatcagtccagagttgctgctcttaaagtgatcttttccaggatcctgtgccttgtagcaccttccacgttggcttcacatcctccgtcgaagccatcaatcagaatgtcttccaagatgatcaagatggccaaagggtaccatggagagcctgggaaagatttcaacctgaagtctgggaacctctcatcgactttggagaaacttcatgcctgggagaaaaagctatacaaagaagtaaaggatgaagaaaagctacgggttgtctatgaaaaggagtgcaagagattgaaaagactagatgatcatggagctgagtcagctaagattgatgccgcacaggcttctgtccgaaaattgcttacgaaaattaatgtttgtatcagagctgtggataccatatcgagcaggatacataagttgagggatgaagaattactgccccaagtaacggaattgattcatggattgataagaatgtggaaatccatgcttaaatgccaccagaaacagttccaagctattatggagagcagaattcgatcccttaaggggaatgccagccttaggaaagattctggtttgaaagctactcttgaacttgaaatggagcttctgagttggtgcagtaactttaacaattgggttaacacccagaaatcttatgtacagtccttaaatggttggcttttaaggtgcatcaatagcgaacctgaagaaactgccgatggagttgccccgttctctccaagccggatcggagctcctcctatttttgtaatatgcaacgattggttccaagcaatggaaataatttcacagcaagcagtggcagatgctatgtatgatttcgcgtcaaccttacatcagttatgggataggcaggatgaggcgcaacgtcaaagggtgaaggcagaaaacctctccaaggatttagagaaccgacttaagaaactgggcatggagaggatgagaagggagcatggccatgcagcatcatcagacaaatctgctcgctcaaagactacttctgaaagtggagtttcagcactggatgatctaaaagtggatttggattcaatgaggaagagattttccgaggagaaggcgaggcacaaggaggccatcaaaatggttaacagtgctgcttccaatagtttgcagacaggtttgattcccatatttgaggctttgggtagtttcacttcagaggcattgaaggttcatgagcaggtgagagttcaaaatgtcggaggctcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

910

Amino Acids

100.54

Weight (kDa)

6.29

Isoelectric Point (pI)

51.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21740 AT1G77500
fragaria_vesca	FvH4_2g27210 FvH4_2g27210 FvH4_2g27210 FvH4_2g27210 FvH4_2g27210
malus_domestica	MD08G1161000.v1.1 MD15G1346100.v1.1
prunus_persica	Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1 Prupe.1G494000_v2.0.a1
pyrus_communis	pycom08g13820 pycom15g31020
rosa_chinensis	RchiOBHm_Chr6g0296121
rosa_laevigata	RLG00000011728
rosa_multiflora	Rmu_sc0003139.1_g000046
rosa_roxburghii	Rroxscaffold_1G00036630 Rroxscaffold_7G00171810 Rroxscaffold_7G00178240
rosa_rugosa	Rorug06G0257900 Rorug06G0258000 Rorug06G0258100 Rorug06G0258200
rosa_samantha	Rh6AG370700 Rh6BG378300 Rh6CG383900 Rh6DG370700
rosa_wichuraiana	Rw6G032310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	432
AarI	CACCTGC	2 cut(s)	1052, 2692
AasI	GACNNNNNNGTC	1 cut(s)	1351
Acc16I	TGCGCA	1 cut(s)	753
Acc36I	ACCTGC	2 cut(s)	1052, 2692
Acc65I	GGTACC	2 cut(s)	415, 1608
AccB1I	GGYRCC	3 cut(s)	191, 415, 1608
AccB7I	CCANNNNNTGG	1 cut(s)	2275
AccBSI	CCGCTC	1 cut(s)	58
AccI	GTMKAC	2 cut(s)	24, 168
AccII	CGCG	3 cut(s)	107, 152, 2324
AclWI	GGATC	7 cut(s)	734, 747, 1330, 1507, 1520, 2007, 2234
AcoI	YGGCCR	3 cut(s)	102, 1599, 2455
AcsI	RAATTY	6 cut(s)	445, 463, 568, 1087, 1099, 2007
AcuI	CTGAAG	3 cut(s)	1661, 2205, 2661
AcyI	GRCGYC	3 cut(s)	80, 192, 602
AfaI	GTAC	5 cut(s)	417, 1359, 1366, 1610, 2139
AfiI	CCNNNNNNNGG	9 cut(s)	106, 263, 264, 409, 1921, 2022, 2037, 2275, 2398
AflII	CTTAAG	2 cut(s)	2018, 2417
AjnI	CCWGG	4 cut(s)	99, 1508, 1621, 1682
Alw21I	GWGCWC	2 cut(s)	905, 2236
Alw26I	GTCTC	3 cut(s)	19, 593, 1406
AlwI	GGATC	7 cut(s)	734, 747, 1330, 1507, 1520, 2007, 2234
Ama87I	CYCGRG	1 cut(s)	257
AoxI	GGCC	7 cut(s)	102, 108, 656, 760, 1599, 2455, 2592
ApeKI	GCWGC	9 cut(s)	211, 399, 754, 1093, 1179, 1465, 1487, 2462, 2615
ApoI	RAATTY	6 cut(s)	445, 463, 568, 1087, 1099, 2007
ArsI	GACNNNNNNTTYG	2 cut(s)	760, 792
AseI	ATTAAT	1 cut(s)	1842
Asp700I	GAANNNNTTC	4 cut(s)	1579, 1631, 1929, 1982
Asp718I	GGTACC	2 cut(s)	415, 1608
AspLEI	GCGC	5 cut(s)	154, 194, 610, 754, 2365
AspS9I	GGNCC	6 cut(s)	109, 175, 646, 656, 761, 776
AsuC2I	CCSGG	5 cut(s)	258, 259, 759, 774, 879
AsuHPI	GGTGA	7 cut(s)	52, 714, 1076, 1118, 1294, 2389, 2716
AsuII	TTCGAA	2 cut(s)	572, 1006
AvaI	CYCGRG	1 cut(s)	257
AvaII	GGWCC	3 cut(s)	175, 646, 776
AxyI	CCTNAGG	1 cut(s)	2036
BaeI	ACNNNNGTAYC	2 cut(s)	1874, 1907
BalI	TGGCCA	2 cut(s)	1601, 2457
BamHI	GGATCC	2 cut(s)	739, 1512
BanI	GGYRCC	3 cut(s)	191, 415, 1608
BanII	GRGCYC	3 cut(s)	722, 905, 2236
BarI	GAAGNNNNNNTAC	4 cut(s)	1710, 1742, 2659, 2691
BbsI	GAAGAC	4 cut(s)	288, 339, 414, 1572
Bbv12I	GWGCWC	2 cut(s)	905, 2236
BbvI	GCAGC	9 cut(s)	198, 411, 766, 1105, 1191, 1452, 1474, 2474, 2602
BccI	CCATC	5 cut(s)	836, 1573, 1591, 2192, 2603
BceAI	ACGGC	3 cut(s)	19, 93, 643
BcgI	CGANNNNNNTGC	4 cut(s)	148, 182, 2186, 2220
BciT130I	CCWGG	4 cut(s)	101, 1510, 1623, 1684
BciVI	GTATCC	3 cut(s)	79, 1858, 1875
BclI	TGATCA	2 cut(s)	1590, 1774
BcnI	CCSGG	5 cut(s)	258, 259, 759, 774, 879
BcoDI	GTCTC	3 cut(s)	19, 593, 1406
BfaI	CTAG	5 cut(s)	179, 816, 1077, 1422, 1769
BfmI	CTRYAG	1 cut(s)	49
BfoI	RGCGCY	1 cut(s)	195
BfrI	CTTAAG	2 cut(s)	2018, 2417
BfuAI	ACCTGC	2 cut(s)	1052, 2692
BfuI	GTATCC	3 cut(s)	79, 1858, 1875
BglI	GCCNNNNNGGC	1 cut(s)	1811
Bme1390I	CCNGG	9 cut(s)	101, 258, 259, 759, 774, 879, 1510, 1623, 1684
Bme18I	GGWCC	3 cut(s)	175, 646, 776
BmeT110I	CYCGRG	1 cut(s)	257
BmgT120I	GGNCC	6 cut(s)	109, 175, 646, 656, 761, 776
BmiI	GGNNCC	9 cut(s)	193, 417, 741, 777, 789, 1514, 1610, 1652, 2267
BmrFI	CCNGG	9 cut(s)	101, 258, 259, 759, 774, 879, 1510, 1623, 1684
BmrI	ACTGGG	1 cut(s)	2435
BmsI	GCATC	5 cut(s)	1313, 1792, 2178, 2296, 2474
BmuI	ACTGGG	1 cut(s)	2435
BpiI	GAAGAC	4 cut(s)	288, 339, 414, 1572
BplI	GAGNNNNNCTC	2 cut(s)	1403, 1435
Bpu14I	TTCGAA	2 cut(s)	572, 1006
BpuEI	CTTGAG	3 cut(s)	119, 886, 1472
BpuMI	CCSGG	5 cut(s)	258, 259, 759, 774, 879
BsaHI	GRCGYC	3 cut(s)	80, 192, 602
BsaWI	WCCGGW	5 cut(s)	223, 409, 497, 524, 643
BsaXI	ACNNNNNCTCC	4 cut(s)	404, 434, 728, 758
Bsc4I	CCNNNNNNNGG	9 cut(s)	106, 263, 264, 409, 1921, 2022, 2037, 2275, 2398
Bse118I	RCCGGY	3 cut(s)	194, 604, 724
Bse1I	ACTGG	3 cut(s)	127, 2430, 2526
Bse21I	CCTNAGG	1 cut(s)	2036
Bse3DI	GCAATG	1 cut(s)	2280
BseBI	CCWGG	4 cut(s)	101, 1510, 1623, 1684
BseLI	CCNNNNNNNGG	9 cut(s)	106, 263, 264, 409, 1921, 2022, 2037, 2275, 2398
BseMI	GCAATG	1 cut(s)	2280
BseMII	CTCAG	2 cut(s)	1776, 2078
BseNI	ACTGG	3 cut(s)	127, 2430, 2526
BseRI	GAGGAG	4 cut(s)	705, 1313, 2226, 2585
BseXI	GCAGC	9 cut(s)	198, 411, 766, 1105, 1191, 1452, 1474, 2474, 2602
BseYI	CCCAGC	1 cut(s)	819
BsgI	GTGCAG	2 cut(s)	1178, 2116
Bsh1236I	CGCG	3 cut(s)	107, 152, 2324
BshFI	GGCC	7 cut(s)	104, 110, 658, 762, 1601, 2457, 2594
BshNI	GGYRCC	3 cut(s)	191, 415, 1608
BsiHKAI	GWGCWC	2 cut(s)	905, 2236
BsiHKCI	CYCGRG	1 cut(s)	257
BslFI	GGGAC	5 cut(s)	77, 1084, 1126, 1174, 1236
BslI	CCNNNNNNNGG	9 cut(s)	106, 263, 264, 409, 1921, 2022, 2037, 2275, 2398
BsmAI	GTCTC	3 cut(s)	19, 593, 1406
BsmBI	CGTCTC	1 cut(s)	593
BsmFI	GGGAC	5 cut(s)	77, 1084, 1126, 1174, 1236
BsmI	GAATGC	1 cut(s)	2032
BsnI	GGCC	7 cut(s)	104, 110, 658, 762, 1601, 2457, 2594
BsoBI	CYCGRG	1 cut(s)	257
Bsp119I	TTCGAA	2 cut(s)	572, 1006
Bsp1286I	GDGCHC	3 cut(s)	722, 905, 2236
Bsp1407I	TGTACA	1 cut(s)	2137
Bsp19I	CCATGG	1 cut(s)	1612
BspANI	GGCC	7 cut(s)	104, 110, 658, 762, 1601, 2457, 2594
BspCNI	CTCAG	2 cut(s)	1777, 2079
BspFNI	CGCG	3 cut(s)	107, 152, 2324
BspHI	TCATGA	2 cut(s)	1054, 2695
BspLI	GGNNCC	9 cut(s)	193, 417, 741, 777, 789, 1514, 1610, 1652, 2267
BspMAI	CTGCAG	1 cut(s)	53
BspMI	ACCTGC	2 cut(s)	1052, 2692
BspPI	GGATC	7 cut(s)	734, 747, 1330, 1507, 1520, 2007, 2234
BspQI	GCTCTTC	1 cut(s)	1254
BspT104I	TTCGAA	2 cut(s)	572, 1006
BspT107I	GGYRCC	3 cut(s)	191, 415, 1608
BspTI	CTTAAG	2 cut(s)	2018, 2417
BsrBI	CCGCTC	1 cut(s)	58
BsrDI	GCAATG	1 cut(s)	2280
BsrFI	RCCGGY	3 cut(s)	194, 604, 724
BsrGI	TGTACA	1 cut(s)	2137
BsrI	ACTGG	3 cut(s)	127, 2430, 2526
BssAI	RCCGGY	3 cut(s)	194, 604, 724
BssNI	GRCGYC	3 cut(s)	80, 192, 602
BssT1I	CCWWGG	3 cut(s)	274, 1612, 2397
Bst2UI	CCWGG	4 cut(s)	101, 1510, 1623, 1684
Bst4CI	ACNGT	6 cut(s)	420, 1165, 1364, 1983, 2142, 2612
Bst6I	CTCTTC	2 cut(s)	1254, 2552
BstACI	GRCGYC	3 cut(s)	80, 192, 602
BstAFI	CTTAAG	2 cut(s)	2018, 2417
BstAUI	TGTACA	1 cut(s)	2137
BstBI	TTCGAA	2 cut(s)	572, 1006
BstC8I	GCNNGC	8 cut(s)	196, 254, 606, 764, 1463, 2032, 2295, 2485
BstDEI	CTNAG	4 cut(s)	1785, 1794, 2036, 2087
BstDSI	CCRYGG	3 cut(s)	105, 782, 1612
BstENI	CCTNNNNNAGG	1 cut(s)	2396
BstFNI	CGCG	3 cut(s)	107, 152, 2324
BstH2I	RGCGCY	1 cut(s)	195
BstHHI	GCGC	5 cut(s)	154, 194, 610, 754, 2365
BstMAI	GTCTC	3 cut(s)	19, 593, 1406
BstMWI	GCNNNNNNNGC	8 cut(s)	104, 195, 763, 796, 799, 1790, 1811, 2175
BstNI	CCWGG	4 cut(s)	101, 1510, 1623, 1684
BstNSI	RCATGY	1 cut(s)	1268
BstSCI	CCNGG	9 cut(s)	99, 256, 257, 757, 772, 877, 1508, 1621, 1682
BstSFI	CTRYAG	1 cut(s)	49
BstUI	CGCG	3 cut(s)	107, 152, 2324
BstV1I	GCAGC	9 cut(s)	198, 411, 766, 1105, 1191, 1452, 1474, 2474, 2602
BstV2I	GAAGAC	4 cut(s)	288, 339, 414, 1572
BstX2I	RGATCY	3 cut(s)	739, 1322, 1512
BstXI	CCANNNNNNTGG	1 cut(s)	2602
BstYI	RGATCY	3 cut(s)	739, 1322, 1512
Bsu36I	CCTNAGG	1 cut(s)	2036
BsuI	GTATCC	3 cut(s)	79, 1858, 1875
BsuRI	GGCC	7 cut(s)	104, 110, 658, 762, 1601, 2457, 2594
BtgI	CCRYGG	3 cut(s)	105, 782, 1612
BtsI	GCAGTG	4 cut(s)	233, 1150, 1190, 2304
BtsIMutI	CAGTG	6 cut(s)	233, 1150, 1190, 2304, 2519, 2617
BveI	ACCTGC	2 cut(s)	1052, 2692
Cac8I	GCNNGC	8 cut(s)	196, 254, 606, 764, 1463, 2032, 2295, 2485
CciI	TCATGA	2 cut(s)	1054, 2695
CfoI	GCGC	5 cut(s)	154, 194, 610, 754, 2365
Cfr10I	RCCGGY	3 cut(s)	194, 604, 724
Cfr13I	GGNCC	6 cut(s)	109, 175, 646, 656, 761, 776
Cfr42I	CCGCGG	1 cut(s)	108
Cfr9I	CCCGGG	1 cut(s)	257
CseI	GACGC	5 cut(s)	69, 158, 610, 1067, 2313
Csp6I	GTAC	5 cut(s)	416, 1358, 1365, 1609, 2138
CviQI	GTAC	5 cut(s)	416, 1358, 1365, 1609, 2138
DdeI	CTNAG	4 cut(s)	1785, 1794, 2036, 2087
DinI	GGCGCC	1 cut(s)	193
DrdI	GACNNNNNNGTC	1 cut(s)	1351
DseDI	GACNNNNNNGTC	1 cut(s)	1351
EaeI	YGGCCR	3 cut(s)	102, 1599, 2455
Eam1104I	CTCTTC	2 cut(s)	1254, 2552
EarI	CTCTTC	2 cut(s)	1254, 2552
Ecl136II	GAGCTC	2 cut(s)	903, 2234
Eco130I	CCWWGG	3 cut(s)	274, 1612, 2397
Eco24I	GRGCYC	3 cut(s)	722, 905, 2236
Eco47I	GGWCC	3 cut(s)	175, 646, 776
Eco53kI	GAGCTC	2 cut(s)	903, 2234
Eco57I	CTGAAG	3 cut(s)	1661, 2205, 2661
Eco81I	CCTNAGG	1 cut(s)	2036
Eco88I	CYCGRG	1 cut(s)	257
EcoICRI	GAGCTC	2 cut(s)	903, 2234
EcoNI	CCTNNNNNAGG	1 cut(s)	2396
EcoO109I	RGGNCCY	2 cut(s)	175, 776
EcoRI	GAATTC	4 cut(s)	463, 568, 1099, 2007
EcoRII	CCWGG	4 cut(s)	99, 1508, 1621, 1682
EcoT14I	CCWWGG	3 cut(s)	274, 1612, 2397
EcoT38I	GRGCYC	3 cut(s)	722, 905, 2236
EgeI	GGCGCC	1 cut(s)	193
EheI	GGCGCC	1 cut(s)	193
ErhI	CCWWGG	3 cut(s)	274, 1612, 2397
Esp3I	CGTCTC	1 cut(s)	593
FalI	AAGNNNNNCTT	2 cut(s)	2049, 2081
FaqI	GGGAC	5 cut(s)	77, 1084, 1126, 1174, 1236
FauI	CCCGC	3 cut(s)	98, 191, 771
FbaI	TGATCA	2 cut(s)	1590, 1774
FblI	GTMKAC	2 cut(s)	24, 168
FriOI	GRGCYC	3 cut(s)	722, 905, 2236
FspBI	CTAG	5 cut(s)	179, 816, 1077, 1422, 1769
FspI	TGCGCA	1 cut(s)	753
GlaI	GCGC	5 cut(s)	153, 193, 609, 753, 2364
GsaI	CCCAGC	1 cut(s)	823
HaeII	RGCGCY	1 cut(s)	195
HaeIII	GGCC	7 cut(s)	104, 110, 658, 762, 1601, 2457, 2594
HgaI	GACGC	5 cut(s)	69, 158, 610, 1067, 2313
HhaI	GCGC	5 cut(s)	154, 194, 610, 754, 2365
Hin1I	GRCGYC	3 cut(s)	80, 192, 602
Hin6I	GCGC	5 cut(s)	152, 192, 608, 752, 2363
HinP1I	GCGC	5 cut(s)	152, 192, 608, 752, 2363
HincII	GTYRAC	4 cut(s)	169, 2119, 2328, 2608
HindII	GTYRAC	4 cut(s)	169, 2119, 2328, 2608
HindIII	AAGCTT	1 cut(s)	807
HpaI	GTTAAC	2 cut(s)	2119, 2608
HphI	GGTGA	7 cut(s)	52, 714, 1076, 1118, 1294, 2389, 2716
HpyCH4III	ACNGT	6 cut(s)	420, 1165, 1364, 1983, 2142, 2612
HpyCH4IV	ACGT	4 cut(s)	327, 614, 1538, 2368
HpyF10VI	GCNNNNNNNGC	8 cut(s)	104, 195, 763, 796, 799, 1790, 1811, 2175
HpyF3I	CTNAG	4 cut(s)	1785, 1794, 2036, 2087
HpySE526I	ACGT	4 cut(s)	327, 614, 1538, 2368
Hsp92I	GRCGYC	3 cut(s)	80, 192, 602
HspAI	GCGC	5 cut(s)	152, 192, 608, 752, 2363
KasI	GGCGCC	1 cut(s)	191
KpnI	GGTACC	2 cut(s)	419, 1612
KroI	GCCGGC	2 cut(s)	194, 604
KroNI	GCCGGC	2 cut(s)	196, 606
Ksp22I	TGATCA	2 cut(s)	1590, 1774
KspAI	GTTAAC	2 cut(s)	2119, 2608
KspI	CCGCGG	1 cut(s)	108
LguI	GCTCTTC	1 cut(s)	1254
LmnI	GCTCC	8 cut(s)	55, 787, 900, 1781, 2080, 2231, 2239, 2449
Lsp1109I	GCAGC	9 cut(s)	198, 411, 766, 1105, 1191, 1452, 1474, 2474, 2602
LweI	GCATC	5 cut(s)	1313, 1792, 2178, 2296, 2474
MaeI	CTAG	5 cut(s)	179, 816, 1077, 1422, 1769
MaeII	ACGT	4 cut(s)	327, 614, 1538, 2368
MaeIII	GTNAC	5 cut(s)	40, 860, 869, 1918, 2099
MbiI	CCGCTC	1 cut(s)	58
MfeI	CAATTG	1 cut(s)	2110
MflI	RGATCY	3 cut(s)	739, 1322, 1512
MhlI	GDGCHC	3 cut(s)	722, 905, 2236
MlsI	TGGCCA	2 cut(s)	1601, 2457
MluNI	TGGCCA	2 cut(s)	1601, 2457
Mly113I	GGCGCC	1 cut(s)	192
MlyI	GAGTC	4 cut(s)	37, 329, 917, 1796
MmeI	TCCRAC	5 cut(s)	63, 267, 645, 1300, 2701
Mox20I	TGGCCA	2 cut(s)	1601, 2457
MreI	CGCCGGCG	2 cut(s)	194, 604
MroNI	GCCGGC	2 cut(s)	194, 604
MroXI	GAANNNNTTC	4 cut(s)	1579, 1631, 1929, 1982
MscI	TGGCCA	2 cut(s)	1601, 2457
MslI	CAYNNNNRTG	2 cut(s)	2457, 2600
Msp20I	TGGCCA	2 cut(s)	1601, 2457
MspA1I	CMGCKG	1 cut(s)	107
MspCI	CTTAAG	2 cut(s)	2018, 2417
MspR9I	CCNGG	9 cut(s)	101, 258, 259, 759, 774, 879, 1510, 1623, 1684
MunI	CAATTG	1 cut(s)	2110
Mva1269I	GAATGC	1 cut(s)	2032
MvaI	CCWGG	4 cut(s)	101, 1510, 1623, 1684
MvnI	CGCG	3 cut(s)	107, 152, 2324
MwoI	GCNNNNNNNGC	8 cut(s)	104, 195, 763, 796, 799, 1790, 1811, 2175
NaeI	GCCGGC	2 cut(s)	196, 606
NarI	GGCGCC	1 cut(s)	192
NciI	CCSGG	5 cut(s)	258, 259, 759, 774, 879
NcoI	CCATGG	1 cut(s)	1612
NgoMIV	GCCGGC	2 cut(s)	194, 604
NlaIV	GGNNCC	9 cut(s)	193, 417, 741, 777, 789, 1514, 1610, 1652, 2267
NmeAIII	GCCGAG	1 cut(s)	884
NmuCI	GTSAC	1 cut(s)	40
NsbI	TGCGCA	1 cut(s)	753
NspI	RCATGY	1 cut(s)	1268
NspV	TTCGAA	2 cut(s)	572, 1006
PagI	TCATGA	2 cut(s)	1054, 2695
PaqCI	CACCTGC	2 cut(s)	1052, 2692
PciSI	GCTCTTC	1 cut(s)	1254
PcsI	WCGNNNNNNNCGW	1 cut(s)	296
PctI	GAATGC	1 cut(s)	2032
PdiI	GCCGGC	2 cut(s)	196, 606
PdmI	GAANNNNTTC	4 cut(s)	1579, 1631, 1929, 1982
PflFI	GACNNNGTC	3 cut(s)	179, 520, 547
PflMI	CCANNNNNTGG	1 cut(s)	2275
PfoI	TCCNGGA	1 cut(s)	1508
PleI	GAGTC	4 cut(s)	37, 329, 917, 1795
PluTI	GGCGCC	1 cut(s)	195
PpsI	GAGTC	4 cut(s)	37, 329, 917, 1795
PpuMI	RGGWCCY	2 cut(s)	175, 776
PshBI	ATTAAT	1 cut(s)	1842
PsiI	TTATAA	1 cut(s)	432
Psp124BI	GAGCTC	2 cut(s)	905, 2236
Psp5II	RGGWCCY	2 cut(s)	175, 776
Psp6I	CCWGG	4 cut(s)	99, 1508, 1621, 1682
PspFI	CCCAGC	1 cut(s)	819
PspGI	CCWGG	4 cut(s)	99, 1508, 1621, 1682
PspN4I	GGNNCC	9 cut(s)	193, 417, 741, 777, 789, 1514, 1610, 1652, 2267
PspPI	GGNCC	6 cut(s)	109, 175, 646, 656, 761, 776
PspPPI	RGGWCCY	2 cut(s)	175, 776
PsrI	GAACNNNNNNTAC	2 cut(s)	399, 431
PstI	CTGCAG	1 cut(s)	53
PsuI	RGATCY	3 cut(s)	739, 1322, 1512
PsyI	GACNNNGTC	3 cut(s)	179, 520, 547
RsaI	GTAC	5 cut(s)	417, 1359, 1366, 1610, 2139
RsaNI	GTAC	5 cut(s)	416, 1358, 1365, 1609, 2138
RseI	CAYNNNNRTG	2 cut(s)	2457, 2600
SacI	GAGCTC	2 cut(s)	905, 2236
SacII	CCGCGG	1 cut(s)	108
SalI	GTCGAC	1 cut(s)	167
SapI	GCTCTTC	1 cut(s)	1254
Sau96I	GGNCC	6 cut(s)	109, 175, 646, 656, 761, 776
SchI	GAGTC	4 cut(s)	37, 329, 917, 1796
ScrFI	CCNGG	9 cut(s)	101, 258, 259, 759, 774, 879, 1510, 1623, 1684
SduI	GDGCHC	3 cut(s)	722, 905, 2236
SfaNI	GCATC	5 cut(s)	1313, 1792, 2178, 2296, 2474
SfcI	CTRYAG	1 cut(s)	49
SfoI	GGCGCC	1 cut(s)	193
Sfr303I	CCGCGG	1 cut(s)	108
SfuI	TTCGAA	2 cut(s)	572, 1006
SgrAI	CRCCGGYG	3 cut(s)	194, 604, 724
SgrBI	CCGCGG	1 cut(s)	108
SgrDI	CGTCGACG	1 cut(s)	167
SinI	GGWCC	3 cut(s)	175, 646, 776
SmaI	CCCGGG	1 cut(s)	259
SmiMI	CAYNNNNRTG	2 cut(s)	2457, 2600
SmlI	CTYRAG	5 cut(s)	134, 865, 1451, 2018, 2417
SmoI	CTYRAG	5 cut(s)	134, 865, 1451, 2018, 2417
SspDI	GGCGCC	1 cut(s)	191
SspMI	CTAG	5 cut(s)	179, 816, 1077, 1422, 1769
SstI	GAGCTC	2 cut(s)	905, 2236
StyD4I	CCNGG	9 cut(s)	99, 256, 257, 757, 772, 877, 1508, 1621, 1682
StyI	CCWWGG	3 cut(s)	274, 1612, 2397
TaaI	ACNGT	6 cut(s)	420, 1165, 1364, 1983, 2142, 2612
TaiI	ACGT	4 cut(s)	330, 617, 1541, 2371
TatI	WGTACW	2 cut(s)	1357, 2137
TauI	GCSGC	8 cut(s)	107, 110, 192, 731, 793, 802, 911, 1808
TscAI	CASTG	6 cut(s)	240, 1150, 1197, 2304, 2526, 2617
TseFI	GTSAC	1 cut(s)	40
TseI	GCWGC	9 cut(s)	211, 399, 754, 1093, 1179, 1465, 1487, 2462, 2615
Tsp45I	GTSAC	1 cut(s)	40
TspDTI	ATGAA	8 cut(s)	456, 984, 1667, 1731, 1755, 1914, 1922, 2684
TspGWI	ACGGA	3 cut(s)	732, 1545, 1937
TspMI	CCCGGG	1 cut(s)	257
TspRI	CASTG	6 cut(s)	240, 1150, 1197, 2304, 2526, 2617
Tth111I	GACNNNGTC	3 cut(s)	179, 520, 547
Van91I	CCANNNNNTGG	1 cut(s)	2275
Vha464I	CTTAAG	2 cut(s)	2018, 2417
VpaK11BI	GGWCC	3 cut(s)	175, 646, 776
VspI	ATTAAT	1 cut(s)	1842
XagI	CCTNNNNNAGG	1 cut(s)	2396
XapI	RAATTY	6 cut(s)	445, 463, 568, 1087, 1099, 2007
XceI	RCATGY	1 cut(s)	1268
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1619
XmaI	CCCGGG	1 cut(s)	257
XmiI	GTMKAC	2 cut(s)	24, 168
XmnI	GAANNNNTTC	4 cut(s)	1579, 1631, 1929, 1982
XspI	CTAG	5 cut(s)	179, 816, 1077, 1422, 1769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.