Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0003186

Physical Location & Seq

Genomic Coordinates Forward (+)

19812820 .. 19820359

Gene Structure 7540 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g19860.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGCTGTCCAAAATCTCAGTTACCCAGTTGAAAACATCACCTGCTGCACCCGTTTCTGGATTTTCATGGCGTGGGAATCGTCCTAGGCTTGGATATTGTGCCGGGAATTCTTCAGAGCGTAACAAGTTGCGGTTCAGGATTGTGGGGCTGTCTCTCGGGGATAGGTGGAAGCTCAATGACTTTGATGCAAATGCAGTACAAGAAAAGTTGAATTCATGGCTGGTAAAGACGCAAAGTTTTTTAAATGAAGTGGCGTCCACGTCTCCATTGGCAAGAACTGATCAGACTAAAAAGCCTGTCACTAGAAATGCTTCAGAGACACAAGATATGGAGGGCATATTTATGGCAGAACAGACAATTAATAGCAGAACACCAAATGGAATTCTCTCTTTAGCTGCTGTTGTATCTATAGAGCAATTTAGCAGGATGAATGGATTGACAGGGCAGAAGATGCAGAAAATATTTAAAGCACTTGTTCCTGAGTCTACATACAATGATGCTCGCAATTTGGTAGAATATTGCTGCTTCAGGTTTCTGTCAAGGGATAATTCTGATATTCATCCTTCCCTCAAGGAACCTTCATTCCAAAGACTTATATTTATAACTATGCTTGCATGGGAGAATCCTTATCGAGAGGATCTTGCTAATGGTTCGGAGAAGGCTTCCTTTCAGAGAAAGCTTGTCAGAGAAGAGGCTTTTGTTCGAATGGCTCCTGCTATTTCTGGTGTGGCTGATAGGTCAACAGCGAATAATCTATTTAAGGCCCTTGCCGGTGATGAACAGGGCATCTCTCTGAGCACATGGTTGACTTATGTTCATGAACTTCTCAAGATTCACGAAGGAAGAAAATCATACCAGACTCGACAATGTTCCAACCTTTCTGAGGAGAGAATTTTATGCATTGGTTCCAGCAGGAAGCGGCCTGTCCTAAAATGGGAGAACAATATGGCATGGCCAGGAAAAGTTACATTAACTGATAAAGCAATTTATTTTGAGGCCGTTGGCCTTGCTGGGCAAAAGGATTCTATAAGATTGGATCTTACAAAACAAGGATTACAGATTAAGAAAGCAAAAGTTGGACCTTTTGGTTCTGGTCTCTTCGACTCTGCCGTCTCTATATCATATGGTCCCAAATCAGAAACATGGGTGCTTGAATTTGTGGACTTAGGTGGAGAAATGAGGCGAGACGTGTGGCATGCTTTTATTAGCGAAATTAATGCTGTACACAAGTTTATCAGTGATTATGGACCGGAGGAAGATGATGAATCCATATTTCATGTTTATGGTGCTCACAAAGGGAAGGAAAGAGCTATGGCCACTGCCATTAATAGTATAGCCAGACTACAGGCTCTTCAATTTATGGGGAAGTTGTTGGATGATCCCACCAAACTTGTTCAGTTTACATATTTACAGTATGCACCATTTGGTGAGGTAGTTTCTCAGACTCTAGCAGTAAATTATTGGGGTGGACCATTGATATCAAAGTATTTAGAGACGGACTACCAGCCAGCTCAAGGAGTGAGGGCTTCTAATGAAATGATTGAAAGCAGCAGCAATCATGTGTTTGACATAGATGGCAGTGTTTACTTGCACAAATGGAAGAGATCTCCATGTTGGGCTTCAAGTGCTTCTGTTACCTTTTGGAAGAACACTTCAACAAGACAGGGGCTAGTTTTAAGTAAAAATCTTGTTGTTGCCGATGTGTCCCTTGTTGAAAGGGCAACAAGAATATGCAAACAAAAATGGCAGGAAGCTGAAACAACTCAAGCCACAATTGATGCTGCAACGCTTAAGGGAATACCAAGTAACATTGATCTATTCAAGGAACTTCTGTTTCCTCTGACCATAACTGTGAGAAATTTCGAAAAACTTAGGCGCTGGGAGGAGCCATATTCGACCATTTCTTTTCTTGCCTTTGCCTATACAGTCATCTTCAGGAATTTGCTGTCATATGTATTCCCAACGGCATTGATAATTTTGGCAGCTGTCATGCTGACATTGAAGGGGCTAAAGGAGCAAGGCCGCCTTGGACGATCATTTGGAAAAATTACTATCCGTGACCAGCCTCCTTCAAATACCATTGAGAAAATTATAGCCGTAAAAGATGCCATGCACGATGTGGAAAGTTATTTACAGAATCTGAATGTCACTCTTCTGAAAATACATACAGTTTTCCTTTCTGGTCAGCCTCAGATAACGACTGAGGTTGCGCTGGTGTTGTTATCTTCTGCAACCATTCTCCTCATTTTCCCCTTCAAATATGTTCTTGCCTTTTTTATCTTTGATCTGTTCACACGGGAGCTTGAGTTCAGGAGGGAAATGGTTAAAAGGTTTATGAAACTCTTGAAGGAGCGTTGGGACAGAGTGCCTGCAGCCCCTGTAGTTGTATTGCCTTTTGGAAGTGAGGAGCCAGCACCAAAACCGAATACAAAGGAAAGCAAGGACCCAGAAAAGTCAGAAAGAAGCCTTGGCAGCAGCAGTTCTGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF639

Protein Analysis

830

Amino Acids

93.45

Weight (kDa)

9.24

Isoelectric Point (pI)

41.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003186)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71240 AT1G71240 AT1G71240
fragaria_vesca	FvH4_5g29650 FvH4_5g29650 FvH4_5g29650 FvH4_5g29650 FvH4_5g29650 FvH4_5g29650 FvH4_5g29650
malus_domestica	MD08G1227800.v1.1 MD15G1421600.v1.1
prunus_persica	Prupe.1G566800_v2.0.a1 Prupe.1G566800_v2.0.a1 Prupe.1G566800_v2.0.a1 Prupe.1G566800_v2.0.a1 Prupe.1G566800_v2.0.a1 Prupe.1G566800_v2.0.a1 Prupe.1G566800_v2.0.a1 Prupe.1G566800_v2.0.a1 Prupe.1G566800_v2.0.a1 Prupe.1G566800_v2.0.a1 Prupe.1G566800_v2.0.a1
pyrus_communis	pycom08g19860 pycom15g37380
rosa_chinensis	RchiOBHm_Chr7g0222711
rosa_laevigata	RLG00000002029
rosa_multiflora	Rmu_sc0000305.1_g000002 Rmu_sc0007870.1_g000008
rosa_roxburghii	Rroxscaffold_3G00236530
rosa_rugosa	Rorug07G0212000 Rorug07G0212100
rosa_samantha	Rh7AG356200 Rh7BG344600 Rh7CG373700 Rh7DG350500
rosa_wichuraiana	Rw7G030220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	602
AarI	CACCTGC	1 cut(s)	49
AasI	GACNNNNNNGTC	1 cut(s)	1109
Acc36I	ACCTGC	1 cut(s)	49
AccI	GTMKAC	1 cut(s)	485
AciI	CCGC	3 cut(s)	130, 919, 2023
AclWI	GGATC	3 cut(s)	645, 1044, 1373
AcoI	YGGCCR	2 cut(s)	953, 1314
AcsI	RAATTY	7 cut(s)	106, 211, 381, 891, 1154, 1858, 1939
AcuI	CTGAAG	4 cut(s)	96, 297, 511, 1918
AcyI	GRCGYC	1 cut(s)	254
AdeI	CACNNNGTG	1 cut(s)	2119
AfaI	GTAC	2 cut(s)	198, 1224
AfiI	CCNNNNNNNGG	5 cut(s)	56, 89, 883, 934, 1514
AflII	CTTAAG	1 cut(s)	1790
AflIII	ACRYGT	1 cut(s)	1188
AjiI	CACGTC	2 cut(s)	261, 1189
AjnI	CCWGG	1 cut(s)	955
AjuI	GAANNNNNNNTTGG	2 cut(s)	2451, 2483
AloI	GAACNNNNNNTCC	4 cut(s)	567, 599, 2291, 2323
AluBI	AGCT	8 cut(s)	172, 395, 679, 1310, 1511, 1754, 1985, 2302
AluI	AGCT	8 cut(s)	172, 395, 679, 1310, 1511, 1754, 1985, 2302
Alw21I	GWGCWC	2 cut(s)	800, 1291
Alw26I	GTCTC	7 cut(s)	156, 267, 311, 1100, 1117, 1179, 1487
AlwI	GGATC	3 cut(s)	645, 1044, 1373
AlwNI	CAGNNNCTG	2 cut(s)	2140, 2378
Ama87I	CYCGRG	1 cut(s)	155
AoxI	GGCC	7 cut(s)	762, 920, 953, 996, 1003, 1314, 2020
ApoI	RAATTY	7 cut(s)	106, 211, 381, 891, 1154, 1858, 1939
AseI	ATTAAT	3 cut(s)	360, 1215, 1326
Asp700I	GAANNNNTTC	1 cut(s)	310
AspA2I	CCTAGG	1 cut(s)	83
AspLEI	GCGC	2 cut(s)	1878, 2212
AspS9I	GGNCC	6 cut(s)	763, 1079, 1127, 1247, 1469, 2443
AsuC2I	CCSGG	1 cut(s)	103
AsuHPI	GGTGA	3 cut(s)	30, 785, 1439
AsuII	TTCGAA	2 cut(s)	703, 1863
AvaI	CYCGRG	1 cut(s)	155
AvaII	GGWCC	5 cut(s)	1079, 1127, 1247, 1469, 2443
AvrII	CCTAGG	1 cut(s)	83
BalI	TGGCCA	2 cut(s)	955, 1316
Bbv12I	GWGCWC	2 cut(s)	800, 1291
BbvI	GCAGC	9 cut(s)	31, 382, 509, 1560, 1563, 1768, 1994, 2384, 2484
BccI	CCATC	1 cut(s)	1568
BceAI	ACGGC	4 cut(s)	983, 1094, 1980, 2081
BcgI	CGANNNNNNTGC	2 cut(s)	1199, 1233
BciT130I	CCWGG	1 cut(s)	957
BclI	TGATCA	1 cut(s)	280
BcnI	CCSGG	1 cut(s)	103
BcoDI	GTCTC	7 cut(s)	156, 267, 311, 1100, 1117, 1179, 1487
BfaI	CTAG	4 cut(s)	84, 303, 1448, 1670
BfmI	CTRYAG	4 cut(s)	408, 1343, 2370, 2379
BfoI	RGCGCY	1 cut(s)	1879
BfrI	CTTAAG	1 cut(s)	1790
BfuAI	ACCTGC	1 cut(s)	49
BglII	AGATCT	1 cut(s)	1604
BlnI	CCTAGG	1 cut(s)	83
Bme1390I	CCNGG	2 cut(s)	103, 957
Bme18I	GGWCC	5 cut(s)	1079, 1127, 1247, 1469, 2443
BmeT110I	CYCGRG	1 cut(s)	155
BmgBI	CACGTC	2 cut(s)	261, 1189
BmgT120I	GGNCC	6 cut(s)	763, 1079, 1127, 1247, 1469, 2443
BmiI	GGNNCC	7 cut(s)	576, 711, 907, 1129, 1887, 2409, 2445
BmrFI	CCNGG	2 cut(s)	103, 957
BmrI	ACTGGG	1 cut(s)	19
BmsI	GCATC	6 cut(s)	175, 441, 487, 795, 1768, 2095
BmuI	ACTGGG	1 cut(s)	19
Bpu14I	TTCGAA	2 cut(s)	703, 1863
BpuEI	CTTGAG	5 cut(s)	554, 812, 1497, 1749, 2324
BpuMI	CCSGG	1 cut(s)	103
BsaBI	GATNNNNATC	1 cut(s)	558
BsaHI	GRCGYC	1 cut(s)	254
BsaI	GGTCTC	1 cut(s)	1100
BsaJI	CCNNGG	3 cut(s)	83, 2026, 2467
BsaWI	WCCGGW	1 cut(s)	1249
BsaXI	ACNNNNNCTCC	2 cut(s)	2291, 2321
Bsc4I	CCNNNNNNNGG	5 cut(s)	56, 89, 883, 934, 1514
Bse118I	RCCGGY	1 cut(s)	770
Bse1I	ACTGG	1 cut(s)	25
Bse8I	GATNNNNATC	1 cut(s)	558
BseBI	CCWGG	1 cut(s)	957
BseDI	CCNNGG	3 cut(s)	83, 2026, 2467
BseGI	GGATG	3 cut(s)	432, 559, 1381
BseJI	GATNNNNATC	1 cut(s)	558
BseLI	CCNNNNNNNGG	5 cut(s)	56, 89, 883, 934, 1514
BseMII	CTCAG	7 cut(s)	30, 471, 785, 873, 1454, 2193, 2204
BseNI	ACTGG	1 cut(s)	25
BseRI	GAGGAG	4 cut(s)	899, 1898, 2231, 2420
BseXI	GCAGC	9 cut(s)	31, 382, 509, 1560, 1563, 1768, 1994, 2384, 2484
BseYI	CCCAGC	2 cut(s)	1010, 1878
BsgI	GTGCAG	1 cut(s)	30
BshFI	GGCC	7 cut(s)	764, 922, 955, 998, 1005, 1316, 2022
BsiHKAI	GWGCWC	2 cut(s)	800, 1291
BsiHKCI	CYCGRG	1 cut(s)	155
BsiSI	CCGG	3 cut(s)	102, 771, 1250
BslFI	GGGAC	3 cut(s)	1113, 1690, 2372
BslI	CCNNNNNNNGG	5 cut(s)	56, 89, 883, 934, 1514
BsmAI	GTCTC	7 cut(s)	156, 267, 311, 1100, 1117, 1179, 1487
BsmBI	CGTCTC	4 cut(s)	267, 1117, 1179, 1487
BsmFI	GGGAC	3 cut(s)	1113, 1690, 2372
BsnI	GGCC	7 cut(s)	764, 922, 955, 998, 1005, 1316, 2022
Bso31I	GGTCTC	1 cut(s)	1100
BsoBI	CYCGRG	1 cut(s)	155
Bsp119I	TTCGAA	2 cut(s)	703, 1863
Bsp1286I	GDGCHC	2 cut(s)	800, 1291
Bsp1407I	TGTACA	1 cut(s)	1222
Bsp143I	GATC	8 cut(s)	280, 637, 1036, 1378, 1604, 1813, 2033, 2284
BspACI	CCGC	3 cut(s)	130, 919, 2023
BspANI	GGCC	7 cut(s)	764, 922, 955, 998, 1005, 1316, 2022
BspCNI	CTCAG	7 cut(s)	29, 472, 786, 874, 1453, 2194, 2203
BspHI	TCATGA	1 cut(s)	817
BspLI	GGNNCC	7 cut(s)	576, 711, 907, 1129, 1887, 2409, 2445
BspMAI	CTGCAG	1 cut(s)	2374
BspMI	ACCTGC	1 cut(s)	49
BspPI	GGATC	3 cut(s)	645, 1044, 1373
BspQI	GCTCTTC	1 cut(s)	1356
BspT104I	TTCGAA	2 cut(s)	703, 1863
BspTI	CTTAAG	1 cut(s)	1790
BspTNI	GGTCTC	1 cut(s)	1100
BsrFI	RCCGGY	1 cut(s)	770
BsrGI	TGTACA	1 cut(s)	1222
BsrI	ACTGG	1 cut(s)	25
BssAI	RCCGGY	1 cut(s)	770
BssECI	CCNNGG	3 cut(s)	83, 2026, 2467
BssMI	GATC	8 cut(s)	280, 637, 1036, 1378, 1604, 1813, 2033, 2284
BssNI	GRCGYC	1 cut(s)	254
BssT1I	CCWWGG	3 cut(s)	83, 2026, 2467
Bst2UI	CCWGG	1 cut(s)	957
Bst4CI	ACNGT	4 cut(s)	1413, 1852, 1927, 2170
Bst6I	CTCTTC	5 cut(s)	684, 1103, 1356, 1595, 2157
BstACI	GRCGYC	1 cut(s)	254
BstAFI	CTTAAG	1 cut(s)	1790
BstAPI	GCANNNNNTGC	1 cut(s)	451
BstAUI	TGTACA	1 cut(s)	1222
BstBI	TTCGAA	2 cut(s)	703, 1863
BstC8I	GCNNGC	6 cut(s)	502, 612, 1197, 1509, 2370, 2412
BstDEI	CTNAG	9 cut(s)	16, 480, 794, 882, 1165, 1440, 1871, 2190, 2202
BstENI	CCTNNNNNAGG	1 cut(s)	881
BstF5I	GGATG	3 cut(s)	432, 559, 1381
BstH2I	RGCGCY	1 cut(s)	1879
BstHHI	GCGC	2 cut(s)	1878, 2212
BstKTI	GATC	8 cut(s)	283, 640, 1039, 1381, 1607, 1816, 2036, 2287
BstMAI	GTCTC	7 cut(s)	156, 267, 311, 1100, 1117, 1179, 1487
BstMBI	GATC	8 cut(s)	280, 637, 1036, 1378, 1604, 1813, 2033, 2284
BstMWI	GCNNNNNNNGC	4 cut(s)	451, 1625, 2014, 2472
BstNI	CCWGG	1 cut(s)	957
BstNSI	RCATGY	1 cut(s)	1199
BstSCI	CCNGG	2 cut(s)	101, 955
BstSFI	CTRYAG	4 cut(s)	408, 1343, 2370, 2379
BstV1I	GCAGC	9 cut(s)	31, 382, 509, 1560, 1563, 1768, 1994, 2384, 2484
BstX2I	RGATCY	3 cut(s)	637, 1036, 1604
BstYI	RGATCY	3 cut(s)	637, 1036, 1604
BsuRI	GGCC	7 cut(s)	764, 922, 955, 998, 1005, 1316, 2022
BtrI	CACGTC	2 cut(s)	261, 1189
BtsCI	GGATG	3 cut(s)	432, 559, 1381
BtsI	GCAGTG	2 cut(s)	1317, 1585
BtsIMutI	CAGTG	3 cut(s)	1243, 1317, 1585
BveI	ACCTGC	1 cut(s)	49
Cac8I	GCNNGC	6 cut(s)	502, 612, 1197, 1509, 2370, 2412
CaiI	CAGNNNCTG	2 cut(s)	2140, 2378
CciI	TCATGA	1 cut(s)	817
CfoI	GCGC	2 cut(s)	1878, 2212
Cfr10I	RCCGGY	1 cut(s)	770
Cfr13I	GGNCC	6 cut(s)	763, 1079, 1127, 1247, 1469, 2443
CseI	GACGC	2 cut(s)	238, 243
Csp6I	GTAC	2 cut(s)	197, 1223
CspCI	CAANNNNNGTGG	2 cut(s)	1372, 1407
CviQI	GTAC	2 cut(s)	197, 1223
DdeI	CTNAG	9 cut(s)	16, 480, 794, 882, 1165, 1440, 1871, 2190, 2202
DpnI	GATC	8 cut(s)	282, 639, 1038, 1380, 1606, 1815, 2035, 2286
DpnII	GATC	8 cut(s)	280, 637, 1036, 1378, 1604, 1813, 2033, 2284
DraI	TTTAAA	2 cut(s)	243, 466
DraIII	CACNNNGTG	1 cut(s)	2119
DrdI	GACNNNNNNGTC	1 cut(s)	1109
DseDI	GACNNNNNNGTC	1 cut(s)	1109
EaeI	YGGCCR	2 cut(s)	953, 1314
Eam1104I	CTCTTC	5 cut(s)	684, 1103, 1356, 1595, 2157
EarI	CTCTTC	5 cut(s)	684, 1103, 1356, 1595, 2157
Eco130I	CCWWGG	3 cut(s)	83, 2026, 2467
Eco31I	GGTCTC	1 cut(s)	1100
Eco32I	GATATC	1 cut(s)	1479
Eco47I	GGWCC	5 cut(s)	1079, 1127, 1247, 1469, 2443
Eco57I	CTGAAG	4 cut(s)	96, 297, 511, 1918
Eco88I	CYCGRG	1 cut(s)	155
EcoNI	CCTNNNNNAGG	1 cut(s)	881
EcoO109I	RGGNCCY	2 cut(s)	763, 2443
EcoRI	GAATTC	3 cut(s)	106, 211, 381
EcoRII	CCWGG	1 cut(s)	955
EcoRV	GATATC	1 cut(s)	1479
EcoT14I	CCWWGG	3 cut(s)	83, 2026, 2467
EcoT22I	ATGCAT	1 cut(s)	902
ErhI	CCWWGG	3 cut(s)	83, 2026, 2467
Esp3I	CGTCTC	4 cut(s)	267, 1117, 1179, 1487
FalI	AAGNNNNNCTT	4 cut(s)	650, 682, 2010, 2042
FaqI	GGGAC	3 cut(s)	1113, 1690, 2372
FauNDI	CATATG	2 cut(s)	1123, 1951
FbaI	TGATCA	1 cut(s)	280
FblI	GTMKAC	1 cut(s)	485
FokI	GGATG	3 cut(s)	439, 546, 1388
FspBI	CTAG	4 cut(s)	84, 303, 1448, 1670
GlaI	GCGC	2 cut(s)	1877, 2211
GsaI	CCCAGC	2 cut(s)	1014, 1882
HaeII	RGCGCY	1 cut(s)	1879
HaeIII	GGCC	7 cut(s)	764, 922, 955, 998, 1005, 1316, 2022
HapII	CCGG	3 cut(s)	102, 771, 1250
HgaI	GACGC	2 cut(s)	238, 243
HhaI	GCGC	2 cut(s)	1878, 2212
Hin1I	GRCGYC	1 cut(s)	254
Hin6I	GCGC	2 cut(s)	1876, 2210
HinP1I	GCGC	2 cut(s)	1876, 2210
HincII	GTYRAC	2 cut(s)	741, 807
HindII	GTYRAC	2 cut(s)	741, 807
HindIII	AAGCTT	1 cut(s)	677
HpaII	CCGG	3 cut(s)	102, 771, 1250
HphI	GGTGA	3 cut(s)	30, 785, 1439
HpyAV	CCTTC	9 cut(s)	573, 588, 652, 833, 1294, 1996, 2079, 2263, 2341
HpyCH4III	ACNGT	4 cut(s)	1413, 1852, 1927, 2170
HpyCH4IV	ACGT	2 cut(s)	260, 1188
HpyF10VI	GCNNNNNNNGC	4 cut(s)	451, 1625, 2014, 2472
HpyF3I	CTNAG	9 cut(s)	16, 480, 794, 882, 1165, 1440, 1871, 2190, 2202
HpySE526I	ACGT	2 cut(s)	260, 1188
Hsp92I	GRCGYC	1 cut(s)	254
HspAI	GCGC	2 cut(s)	1876, 2210
Ksp22I	TGATCA	1 cut(s)	280
Kzo9I	GATC	8 cut(s)	280, 637, 1036, 1378, 1604, 1813, 2033, 2284
LguI	GCTCTTC	1 cut(s)	1356
LmnI	GCTCC	6 cut(s)	715, 1885, 2014, 2299, 2350, 2407
Lsp1109I	GCAGC	9 cut(s)	31, 382, 509, 1560, 1563, 1768, 1994, 2384, 2484
LweI	GCATC	6 cut(s)	175, 441, 487, 795, 1768, 2095
MaeI	CTAG	4 cut(s)	84, 303, 1448, 1670
MaeII	ACGT	2 cut(s)	260, 1188
MaeIII	GTNAC	8 cut(s)	19, 119, 298, 964, 1633, 1805, 2057, 2146
MalI	GATC	8 cut(s)	282, 639, 1038, 1380, 1606, 1815, 2035, 2286
MboI	GATC	8 cut(s)	280, 637, 1036, 1378, 1604, 1813, 2033, 2284
MfeI	CAATTG	1 cut(s)	1773
MflI	RGATCY	3 cut(s)	637, 1036, 1604
MhlI	GDGCHC	2 cut(s)	800, 1291
MlsI	TGGCCA	2 cut(s)	955, 1316
MluNI	TGGCCA	2 cut(s)	955, 1316
MlyI	GAGTC	4 cut(s)	491, 853, 1097, 1438
MmeI	TCCRAC	3 cut(s)	897, 1057, 1353
Mox20I	TGGCCA	2 cut(s)	955, 1316
Mph1103I	ATGCAT	1 cut(s)	902
MroXI	GAANNNNTTC	1 cut(s)	310
MscI	TGGCCA	2 cut(s)	955, 1316
MslI	CAYNNNNRTG	3 cut(s)	341, 1281, 1850
Msp20I	TGGCCA	2 cut(s)	955, 1316
MspA1I	CMGCKG	1 cut(s)	1985
MspCI	CTTAAG	1 cut(s)	1790
MspI	CCGG	3 cut(s)	102, 771, 1250
MspR9I	CCNGG	2 cut(s)	103, 957
MunI	CAATTG	1 cut(s)	1773
MvaI	CCWGG	1 cut(s)	957
MwoI	GCNNNNNNNGC	4 cut(s)	451, 1625, 2014, 2472
NciI	CCSGG	1 cut(s)	103
NdeI	CATATG	2 cut(s)	1123, 1951
NdeII	GATC	8 cut(s)	280, 637, 1036, 1378, 1604, 1813, 2033, 2284
NlaIV	GGNNCC	7 cut(s)	576, 711, 907, 1129, 1887, 2409, 2445
NmuCI	GTSAC	3 cut(s)	298, 2057, 2146
NsiI	ATGCAT	1 cut(s)	902
NspI	RCATGY	1 cut(s)	1199
NspV	TTCGAA	2 cut(s)	703, 1863
PaeI	GCATGC	1 cut(s)	1199
PagI	TCATGA	1 cut(s)	817
PaqCI	CACCTGC	1 cut(s)	49
PciSI	GCTCTTC	1 cut(s)	1356
PcsI	WCGNNNNNNNCGW	1 cut(s)	1107
PdmI	GAANNNNTTC	1 cut(s)	310
PfeI	GAWTC	6 cut(s)	76, 622, 832, 1022, 1265, 2137
PleI	GAGTC	4 cut(s)	490, 853, 1097, 1438
PpsI	GAGTC	4 cut(s)	490, 853, 1097, 1438
PpuMI	RGGWCCY	1 cut(s)	2443
PshBI	ATTAAT	3 cut(s)	360, 1215, 1326
PsiI	TTATAA	1 cut(s)	602
Psp5II	RGGWCCY	1 cut(s)	2443
Psp6I	CCWGG	1 cut(s)	955
PspFI	CCCAGC	2 cut(s)	1010, 1878
PspGI	CCWGG	1 cut(s)	955
PspN4I	GGNNCC	7 cut(s)	576, 711, 907, 1129, 1887, 2409, 2445
PspPI	GGNCC	6 cut(s)	763, 1079, 1127, 1247, 1469, 2443
PspPPI	RGGWCCY	1 cut(s)	2443
PstI	CTGCAG	1 cut(s)	2374
PstNI	CAGNNNCTG	2 cut(s)	2140, 2378
PsuI	RGATCY	3 cut(s)	637, 1036, 1604
PvuII	CAGCTG	1 cut(s)	1985
RsaI	GTAC	2 cut(s)	198, 1224
RsaNI	GTAC	2 cut(s)	197, 1223
RseI	CAYNNNNRTG	3 cut(s)	341, 1281, 1850
SapI	GCTCTTC	1 cut(s)	1356
Sau3AI	GATC	8 cut(s)	280, 637, 1036, 1378, 1604, 1813, 2033, 2284
Sau96I	GGNCC	6 cut(s)	763, 1079, 1127, 1247, 1469, 2443
SchI	GAGTC	4 cut(s)	491, 853, 1097, 1438
ScrFI	CCNGG	2 cut(s)	103, 957
SduI	GDGCHC	2 cut(s)	800, 1291
SfaNI	GCATC	6 cut(s)	175, 441, 487, 795, 1768, 2095
SfcI	CTRYAG	4 cut(s)	408, 1343, 2370, 2379
SfuI	TTCGAA	2 cut(s)	703, 1863
SinI	GGWCC	5 cut(s)	1079, 1127, 1247, 1469, 2443
SmiMI	CAYNNNNRTG	3 cut(s)	341, 1281, 1850
SmlI	CTYRAG	6 cut(s)	569, 827, 1512, 1764, 1790, 2303
SmoI	CTYRAG	6 cut(s)	569, 827, 1512, 1764, 1790, 2303
SphI	GCATGC	1 cut(s)	1199
SsiI	CCGC	3 cut(s)	130, 919, 2023
SspI	AATATT	2 cut(s)	462, 518
SspMI	CTAG	4 cut(s)	84, 303, 1448, 1670
StyD4I	CCNGG	2 cut(s)	101, 955
StyI	CCWWGG	3 cut(s)	83, 2026, 2467
TaaI	ACNGT	4 cut(s)	1413, 1852, 1927, 2170
TaiI	ACGT	2 cut(s)	263, 1191
TaqI	TCGA	6 cut(s)	631, 703, 862, 1101, 1863, 1895
TatI	WGTACW	2 cut(s)	196, 1222
TauI	GCSGC	2 cut(s)	922, 2025
TfiI	GAWTC	6 cut(s)	76, 622, 832, 1022, 1265, 2137
TscAI	CASTG	3 cut(s)	1243, 1324, 1585
TseFI	GTSAC	3 cut(s)	298, 2057, 2146
Tsp45I	GTSAC	3 cut(s)	298, 2057, 2146
TspGWI	ACGGA	2 cut(s)	1511, 2045
TspRI	CASTG	3 cut(s)	1243, 1324, 1585
Vha464I	CTTAAG	1 cut(s)	1790
VpaK11BI	GGWCC	5 cut(s)	1079, 1127, 1247, 1469, 2443
VspI	ATTAAT	3 cut(s)	360, 1215, 1326
XagI	CCTNNNNNAGG	1 cut(s)	881
XapI	RAATTY	7 cut(s)	106, 211, 381, 891, 1154, 1858, 1939
XceI	RCATGY	1 cut(s)	1199
XcmI	CCANNNNNNNNNTGG	2 cut(s)	265, 2116
XmaJI	CCTAGG	1 cut(s)	83
XmiI	GTMKAC	1 cut(s)	485
XmnI	GAANNNNTTC	1 cut(s)	310
XspI	CTAG	4 cut(s)	84, 303, 1448, 1670
Zsp2I	ATGCAT	1 cut(s)	902

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.