RchiOBHm_Chr7g0222711

Plant protein of unknown function (DUF639)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0003186
Physical Location & Seq
Reverse (-)
44367382 .. 44377586
10205 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19936

Sequence Viewer

Length: 2472 bp
ATGCTCTCCAAGTTGTGTGCATCACCCAGTTCCCGATTTTGTGGGCATAGGGGTGGGAATCATCCTCTATGTCGTTTTGGGTATGCTTCAAGGAAATCTTCAGAGTATGACAAGCCTCGGTTCAGGATTGTGGGGCAATCTCTGGGGGATAGGTGGAAGCTCAACGACGTTGATGCCAATGCAGTGCAAGAAAAGTTGAATTCATGGCTACTGAAGACCCAAAGCTTTTTAAGTGAAGTTACTTCTCCACTAGTAAGAACTAGTCAGACTGGAAAACCTGTCACCAGAGATGCTCTTGAGACACAAGATATGGACGACATATTTATGGCTGAACAGACTATTAATAGCAGAACACCAAATGGAATTCTCTCTTTGGCTGCTATTGTATCTGTAGAGCAGTTTAGCAGGATGAATGGATTGACGGGGCAGAAAATGCAGAAAATATTCAAAGCGCTTGTTCCTGAATCTACATATAATGATGCTCGTAATTTGGTTGAATATTGCTGCTTTAGGTTTTTGTCAAGGGATGCTTCTGATGTTCATCCTTCCCTGAAGGAACCTGCATTCCAAAGACTGATATTCATAACAATGCTTGCATGGGAGAATCCTTATCAAGAACATCTTGCCAGTGGTTCGGAGAAAGCTTCTTTTCAGAGAAAACTTGTGAGAGAAGATGCCTTTGTACGTTTGGCTCCTGCAATTTCTGGTGTGGCTGATAGGTCCACAGTGCATAATCTATTTAAGGCTCTAGCTGGTGATGAACAAGGCATCTCTTTGAGCTTGTGGTTGACTTATGTTGATGAACTTCTCAAGGTTCACGAAGGAAGAAAATCATATCAGATACGAGAGTCCCCGAACCTTTCTGAGGAGAGAATCTTATGCATTGGTTCCAGCAGGAAACGTCCTGTCTTAAAATGGGAGAAAAATATGGCCTGGCCTGGAAAAGTTACTCTAACTGATAAAGCTATTTATTTTGAGGCAGCTGGCTTATTTGGACAAAATGATTCTATGAAGTTGGATTTGACAAGACCTGGATTGCGAGTAGAAAAAGCAAAAGTTGGACCTTTTGGTTCTGTTCTCTTTGATTCTGCGGTCTCTATATCATATGGTCCCGAGTCAAAAGACAAGTGGGTGCTGGAATTTGTTGACTTGGGTGGAGAAATGAGGCGAGATGTCTGGCATGCGTTTATTAGTGAGATTATTGTGTTACACAAGTTTATCAGGGAGTATGGTCCAAAGGAAGATGATGAATCGTTATTTCATGTTTATGGTGCTCACAAAGGAAAGGAAAGAGCTATCACCAGTGCCATTAATAGTATAGCTAGACTACAGGCTCTTCAGTTTATGAGGAAGTTGCTAGATGATCCGACCAAACTAGCTCAGTTCACATATCTACAATATGCACCATATGGTGATATTGTTTCTCAGGCTCTAGCAGTAAACTATTGGGGTGGCCCACTGATATCTAAGTTTATAGAGGAACACAACCCACCAGCTCAAGGAGCAAGGCCTTCTAGTGAAATGATTGAAAGCAGTAATCATGTGTTTGACATTGATGGCAGTGTCTACTTACACAAGTGGAAGACCTCTCCATCTTGGGCTTCAAGTGCTTCTGTGAGCTTTTGGAAGAATGCATCAATAAGGCAGGGGGTGGTATTAAGTAAAAATATTGTTGTTGCTGATTCAGCTCTAGTGGAAAGAGCCACAGGAATATGCAAACAAAAATCGCAGGCAGCTGAAAAAACTCAAGCCGCTATTGATGCTGCAATGCTTAAAGGGATACCCAGTAACATCGATCTATTCAAGGAACTTCTGCTTCCTCTGACCATAATTGCCACAAAATTTGAAAAACTTAGGCGCTGGGAGGAGCCATACTTGACTGTTTCTTTTCTTGCATTTTCCTATACAATCATTTTCAGGAATTTGCTGTCATATATATTCCCAACAGCATTGATAATATTGGCAACTGGTATGCTAACACTGAAGGGGCTAAAGGAGCAAGGCCGTCTTGGGAGATCATTTGGAATGATTACTCTCCGTGACCAGCCTCCTTCAAATACTATCGAAAAAATTATAGCTGTAAAAGATGGCATGCAAGATGTGGAAAATTATTTGCAGAATCTGAATGTCACACTTCTGAAAATACATACAATTATCCTTTCTGGTCAGCCTCAGATTACGACTGAGGTTGCACTGGTGCTGTTATCTTCTGCAACAGTTCTCCTCACTGTGCCATTCAAATATGTTCTTGCCTTTCTTATCTTCGATCTCTTCACGCGGGAGCTTGAGTTCAGGAGGGAGATGGTCAAAAGATTCATAGATTTCTTGAAGGAGCGTTGGGACACAGTGCCTGCTGCCCCTGTAGTTGTATTACCGTATGGAAGTAATGAATCCACACCAGAACCTGATAGAAAGGGAAGCAAGGACGTAGAAAAATCTGAAAAAAGTGATAGAAGTAATAATTCTGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF639

Protein Analysis

823

Amino Acids

92.6

Weight (kDa)

8.97

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF639 PF04842 563 - 792 3.9e-85 Plant protein of unknown function (DUF639)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 568
AccI GTMKAC 1 cut(s) 1566
AccII CGCG 1 cut(s) 2278
AciI CCGC 3 cut(s) 1091, 1752, 2278
AclWI GGATC 1 cut(s) 1358
AcsI RAATTY 5 cut(s) 199, 363, 1139, 1841, 1921
AcuI CTGAAG 5 cut(s) 84, 233, 572, 1322, 2003
AfaI GTAC 1 cut(s) 684
AfeI AGCGCT 1 cut(s) 453
AfiI CCNNNNNNNGG 2 cut(s) 865, 1499
AhlI ACTAGT 2 cut(s) 250, 260
AjnI CCWGG 3 cut(s) 932, 937, 1030
AloI GAACNNNNNNTCC 4 cut(s) 549, 581, 2273, 2305
Alw21I GWGCWC 1 cut(s) 1276
Alw26I GTCTC 2 cut(s) 293, 1099
AlwI GGATC 1 cut(s) 1358
AlwNI CAGNNNCTG 3 cut(s) 2122, 2351, 2405
Ama87I CYCGRG 1 cut(s) 1112
Aor51HI AGCGCT 1 cut(s) 453
AoxI GGCC 5 cut(s) 930, 935, 1453, 1508, 2002
ApeKI GCWGC 6 cut(s) 377, 504, 980, 1733, 1763, 2354
ApoI RAATTY 5 cut(s) 199, 363, 1139, 1841, 1921
AseI ATTAAT 2 cut(s) 342, 1311
Asp700I GAANNNNTTC 1 cut(s) 443
AspLEI GCGC 2 cut(s) 454, 1860
AspS9I GGNCC 5 cut(s) 720, 1061, 1109, 1232, 1454
AsuHPI GGTGA 5 cut(s) 15, 274, 767, 1291, 1424
AvaI CYCGRG 1 cut(s) 1112
AvaII GGWCC 4 cut(s) 720, 1061, 1109, 1232
BaeI ACNNNNGTAYC 2 cut(s) 833, 866
BbsI GAAGAC 2 cut(s) 221, 1589
Bbv12I GWGCWC 1 cut(s) 1276
BbvI GCAGC 6 cut(s) 364, 491, 992, 1745, 1750, 2341
BccI CCATC 4 cut(s) 1550, 1600, 2081, 2296
BceAI ACGGC 1 cut(s) 1989
BcgI CGANNNNNNTGC 2 cut(s) 155, 189
BciT130I CCWGG 3 cut(s) 934, 939, 1032
BciVI GTATCC 1 cut(s) 1773
BcoDI GTCTC 2 cut(s) 293, 1099
BcuI ACTAGT 2 cut(s) 250, 260
BfaI CTAG 9 cut(s) 251, 261, 749, 1323, 1358, 1376, 1433, 1515, 1691
BfmI CTRYAG 3 cut(s) 390, 1328, 2361
BfoI RGCGCY 2 cut(s) 455, 1861
BfuAI ACCTGC 1 cut(s) 568
BfuI GTATCC 1 cut(s) 1773
BisI GCNGC 7 cut(s) 378, 505, 981, 1734, 1752, 1764, 2355
BlsI GCNGC 7 cut(s) 379, 506, 982, 1735, 1753, 1765, 2356
Bme1390I CCNGG 3 cut(s) 934, 939, 1032
Bme18I GGWCC 4 cut(s) 720, 1061, 1109, 1232
BmeT110I CYCGRG 1 cut(s) 1112
BmgT120I GGNCC 5 cut(s) 720, 1061, 1109, 1232, 1454
BmiI GGNNCC 5 cut(s) 558, 693, 889, 1111, 1869
BmrFI CCNGG 3 cut(s) 934, 939, 1032
BmrI ACTGGG 2 cut(s) 21, 1779
BmsI GCATC 9 cut(s) 29, 163, 280, 469, 517, 664, 777, 1643, 1750
BmuI ACTGGG 2 cut(s) 21, 1779
BpiI GAAGAC 2 cut(s) 221, 1589
BpuEI CTTGAG 5 cut(s) 317, 794, 1482, 1731, 2306
Bsa29I ATCGAT 1 cut(s) 1794
BsaBI GATNNNNATC 1 cut(s) 540
BsaI GGTCTC 1 cut(s) 1099
BsaJI CCNNGG 1 cut(s) 116
BsaXI ACNNNNNCTCC 2 cut(s) 2273, 2303
Bsc4I CCNNNNNNNGG 2 cut(s) 865, 1499
Bse1I ACTGG 7 cut(s) 27, 274, 627, 1302, 1785, 1972, 2199
Bse3DI GCAATG 1 cut(s) 1773
Bse8I GATNNNNATC 1 cut(s) 540
BseBI CCWGG 3 cut(s) 934, 939, 1032
BseCI ATCGAT 1 cut(s) 1794
BseDI CCNNGG 1 cut(s) 116
BseGI GGATG 4 cut(s) 61, 414, 532, 541
BseJI GATNNNNATC 1 cut(s) 540
BseLI CCNNNNNNNGG 2 cut(s) 865, 1499
BseMI GCAATG 1 cut(s) 1773
BseMII CTCAG 5 cut(s) 855, 1394, 1439, 2175, 2186
BseNI ACTGG 7 cut(s) 27, 274, 627, 1302, 1785, 1972, 2199
BseRI GAGGAG 3 cut(s) 881, 1880, 2213
BseXI GCAGC 6 cut(s) 364, 491, 992, 1745, 1750, 2341
BseYI CCCAGC 1 cut(s) 1860
Bsh1236I CGCG 1 cut(s) 2278
BshFI GGCC 5 cut(s) 932, 937, 1455, 1510, 2004
BshVI ATCGAT 1 cut(s) 1794
BsiHKAI GWGCWC 1 cut(s) 1276
BsiHKCI CYCGRG 1 cut(s) 1112
BslFI GGGAC 3 cut(s) 835, 1095, 2354
BslI CCNNNNNNNGG 2 cut(s) 865, 1499
BsmAI GTCTC 2 cut(s) 293, 1099
BsmFI GGGAC 3 cut(s) 835, 1095, 2354
BsmI GAATGC 2 cut(s) 563, 1636
BsnI GGCC 5 cut(s) 932, 937, 1455, 1510, 2004
Bso31I GGTCTC 1 cut(s) 1099
BsoBI CYCGRG 1 cut(s) 1112
Bsp1286I GDGCHC 1 cut(s) 1276
Bsp143I GATC 4 cut(s) 1363, 1795, 2015, 2266
BspACI CCGC 3 cut(s) 1091, 1752, 2278
BspANI GGCC 5 cut(s) 932, 937, 1455, 1510, 2004
BspCNI CTCAG 5 cut(s) 856, 1393, 1438, 2176, 2185
BspDI ATCGAT 1 cut(s) 1794
BspFNI CGCG 1 cut(s) 2278
BspLI GGNNCC 5 cut(s) 558, 693, 889, 1111, 1869
BspMI ACCTGC 1 cut(s) 568
BspPI GGATC 1 cut(s) 1358
BspQI GCTCTTC 1 cut(s) 1341
BspTNI GGTCTC 1 cut(s) 1099
BsrDI GCAATG 1 cut(s) 1773
BsrI ACTGG 7 cut(s) 27, 274, 627, 1302, 1785, 1972, 2199
BssECI CCNNGG 1 cut(s) 116
BssMI GATC 4 cut(s) 1363, 1795, 2015, 2266
Bst2UI CCWGG 3 cut(s) 934, 939, 1032
Bst4CI ACNGT 6 cut(s) 727, 1882, 2218, 2230, 2347, 2376
Bst6I CTCTTC 2 cut(s) 1341, 2276
BstAPI GCANNNNNTGC 1 cut(s) 433
BstC8I GCNNGC 6 cut(s) 594, 985, 1182, 1731, 2093, 2352
BstDEI CTNAG 7 cut(s) 864, 1380, 1425, 1467, 1853, 2172, 2184
BstENI CCTNNNNNAGG 1 cut(s) 863
BstF5I GGATG 4 cut(s) 61, 414, 532, 541
BstFNI CGCG 1 cut(s) 2278
BstH2I RGCGCY 2 cut(s) 455, 1861
BstHHI GCGC 2 cut(s) 454, 1860
BstKTI GATC 4 cut(s) 1366, 1798, 2018, 2269
BstMAI GTCTC 2 cut(s) 293, 1099
BstMBI GATC 4 cut(s) 1363, 1795, 2015, 2266
BstMWI GCNNNNNNNGC 6 cut(s) 433, 1502, 1607, 1685, 1760, 1996
BstNI CCWGG 3 cut(s) 934, 939, 1032
BstNSI RCATGY 2 cut(s) 1184, 2095
BstSCI CCNGG 3 cut(s) 932, 937, 1030
BstSFI CTRYAG 3 cut(s) 390, 1328, 2361
BstUI CGCG 1 cut(s) 2278
BstV1I GCAGC 6 cut(s) 364, 491, 992, 1745, 1750, 2341
BstV2I GAAGAC 2 cut(s) 221, 1589
Bsu15I ATCGAT 1 cut(s) 1794
BsuI GTATCC 1 cut(s) 1773
BsuRI GGCC 5 cut(s) 932, 937, 1455, 1510, 2004
BsuTUI ATCGAT 1 cut(s) 1794
BtsCI GGATG 4 cut(s) 61, 414, 532, 541
BtsI GCAGTG 2 cut(s) 189, 1567
BveI ACCTGC 1 cut(s) 568
Cac8I GCNNGC 6 cut(s) 594, 985, 1182, 1731, 2093, 2352
CaiI CAGNNNCTG 3 cut(s) 2122, 2351, 2405
CfoI GCGC 2 cut(s) 454, 1860
Cfr13I GGNCC 5 cut(s) 720, 1061, 1109, 1232, 1454
ClaI ATCGAT 1 cut(s) 1794
Csp6I GTAC 1 cut(s) 683
CspCI CAANNNNNGTGG 2 cut(s) 1825, 1860
CviAII CATG 6 cut(s) 204, 597, 1181, 1262, 1541, 2092
CviQI GTAC 1 cut(s) 683
DdeI CTNAG 7 cut(s) 864, 1380, 1425, 1467, 1853, 2172, 2184
DpnI GATC 4 cut(s) 1365, 1797, 2017, 2268
DpnII GATC 4 cut(s) 1363, 1795, 2015, 2266
Eam1104I CTCTTC 2 cut(s) 1341, 2276
EarI CTCTTC 2 cut(s) 1341, 2276
Eco147I AGGCCT 1 cut(s) 1510
Eco31I GGTCTC 1 cut(s) 1099
Eco32I GATATC 1 cut(s) 1464
Eco47I GGWCC 4 cut(s) 720, 1061, 1109, 1232
Eco47III AGCGCT 1 cut(s) 453
Eco57I CTGAAG 5 cut(s) 84, 233, 572, 1322, 2003
Eco88I CYCGRG 1 cut(s) 1112
EcoNI CCTNNNNNAGG 1 cut(s) 863
EcoRI GAATTC 2 cut(s) 199, 363
EcoRII CCWGG 3 cut(s) 932, 937, 1030
EcoRV GATATC 1 cut(s) 1464
EcoT22I ATGCAT 2 cut(s) 884, 1636
FaeI CATG 6 cut(s) 207, 600, 1184, 1265, 1544, 2095
FalI AAGNNNNNCTT 8 cut(s) 82, 114, 514, 546, 606, 638, 1992, 2024
FaqI GGGAC 3 cut(s) 835, 1095, 2354
FatI CATG 6 cut(s) 203, 596, 1180, 1261, 1540, 2091
FauI CCCGC 1 cut(s) 2271
FauNDI CATATG 2 cut(s) 1105, 1408
FblI GTMKAC 1 cut(s) 1566
Fnu4HI GCNGC 7 cut(s) 378, 505, 981, 1734, 1752, 1764, 2355
FokI GGATG 4 cut(s) 48, 421, 528, 539
Fsp4HI GCNGC 7 cut(s) 378, 505, 981, 1734, 1752, 1764, 2355
FspBI CTAG 9 cut(s) 251, 261, 749, 1323, 1358, 1376, 1433, 1515, 1691
GlaI GCGC 2 cut(s) 453, 1859
GluI GCNGC 7 cut(s) 378, 505, 981, 1734, 1752, 1764, 2355
GsaI CCCAGC 1 cut(s) 1864
HaeII RGCGCY 2 cut(s) 455, 1861
HaeIII GGCC 5 cut(s) 932, 937, 1455, 1510, 2004
HhaI GCGC 2 cut(s) 454, 1860
Hin1II CATG 6 cut(s) 207, 600, 1184, 1265, 1544, 2095
Hin6I GCGC 2 cut(s) 452, 1858
HinP1I GCGC 2 cut(s) 452, 1858
HincII GTYRAC 2 cut(s) 789, 1147
HindII GTYRAC 2 cut(s) 789, 1147
HindIII AAGCTT 2 cut(s) 223, 642
HphI GGTGA 5 cut(s) 15, 274, 767, 1291, 1424
Hpy166II GTNNAC 7 cut(s) 723, 789, 817, 1147, 1386, 1441, 1567
Hpy8I GTNNAC 7 cut(s) 723, 789, 817, 1147, 1386, 1441, 1567
Hpy99I CGWCG 1 cut(s) 170
HpyAV CCTTC 7 cut(s) 547, 555, 815, 1521, 1978, 2061, 2323
HpyCH4III ACNGT 6 cut(s) 727, 1882, 2218, 2230, 2347, 2376
HpyCH4IV ACGT 4 cut(s) 168, 685, 901, 2427
HpyF10VI GCNNNNNNNGC 6 cut(s) 433, 1502, 1607, 1685, 1760, 1996
HpyF3I CTNAG 7 cut(s) 864, 1380, 1425, 1467, 1853, 2172, 2184
HpySE526I ACGT 4 cut(s) 168, 685, 901, 2427
Hsp92II CATG 6 cut(s) 207, 600, 1184, 1265, 1544, 2095
HspAI GCGC 2 cut(s) 452, 1858
Kzo9I GATC 4 cut(s) 1363, 1795, 2015, 2266
LguI GCTCTTC 1 cut(s) 1341
LmnI GCTCC 6 cut(s) 697, 1502, 1867, 1996, 2281, 2332
Lsp1109I GCAGC 6 cut(s) 364, 491, 992, 1745, 1750, 2341
LweI GCATC 9 cut(s) 29, 163, 280, 469, 517, 664, 777, 1643, 1750
MaeI CTAG 9 cut(s) 251, 261, 749, 1323, 1358, 1376, 1433, 1515, 1691
MaeII ACGT 4 cut(s) 168, 685, 901, 2427
MaeIII GTNAC 7 cut(s) 238, 280, 946, 1206, 1787, 2039, 2128
MalI GATC 4 cut(s) 1365, 1797, 2017, 2268
MboI GATC 4 cut(s) 1363, 1795, 2015, 2266
MhlI GDGCHC 1 cut(s) 1276
MlyI GAGTC 2 cut(s) 857, 1124
MmeI TCCRAC 3 cut(s) 996, 1039, 1391
Mph1103I ATGCAT 2 cut(s) 884, 1636
MroXI GAANNNNTTC 1 cut(s) 443
MseI TTAA 7 cut(s) 230, 342, 741, 911, 1311, 1658, 1773
MslI CAYNNNNRTG 4 cut(s) 51, 323, 587, 1266
MspA1I CMGCKG 2 cut(s) 983, 1736
MspR9I CCNGG 3 cut(s) 934, 939, 1032
Mva1269I GAATGC 2 cut(s) 563, 1636
MvaI CCWGG 3 cut(s) 934, 939, 1032
MvnI CGCG 1 cut(s) 2278
MwoI GCNNNNNNNGC 6 cut(s) 433, 1502, 1607, 1685, 1760, 1996
NdeI CATATG 2 cut(s) 1105, 1408
NdeII GATC 4 cut(s) 1363, 1795, 2015, 2266
NlaIII CATG 6 cut(s) 207, 600, 1184, 1265, 1544, 2095
NlaIV GGNNCC 5 cut(s) 558, 693, 889, 1111, 1869
NmuCI GTSAC 3 cut(s) 280, 2039, 2128
NsiI ATGCAT 2 cut(s) 884, 1636
NspI RCATGY 2 cut(s) 1184, 2095
PaeI GCATGC 2 cut(s) 1184, 2095
PceI AGGCCT 1 cut(s) 1510
PciSI GCTCTTC 1 cut(s) 1341
PctI GAATGC 2 cut(s) 563, 1636
PdmI GAANNNNTTC 1 cut(s) 443
PkrI GCNGC 7 cut(s) 379, 506, 982, 1735, 1753, 1765, 2356
PleI GAGTC 2 cut(s) 856, 1123
PpsI GAGTC 2 cut(s) 856, 1123
PshBI ATTAAT 2 cut(s) 342, 1311
Psp6I CCWGG 3 cut(s) 932, 937, 1030
PspFI CCCAGC 1 cut(s) 1860
PspGI CCWGG 3 cut(s) 932, 937, 1030
PspN4I GGNNCC 5 cut(s) 558, 693, 889, 1111, 1869
PspPI GGNCC 5 cut(s) 720, 1061, 1109, 1232, 1454
PstNI CAGNNNCTG 3 cut(s) 2122, 2351, 2405
PvuII CAGCTG 2 cut(s) 983, 1736
RsaI GTAC 1 cut(s) 684
RsaNI GTAC 1 cut(s) 683
RseI CAYNNNNRTG 4 cut(s) 51, 323, 587, 1266
SapI GCTCTTC 1 cut(s) 1341
SaqAI TTAA 7 cut(s) 230, 342, 741, 911, 1311, 1658, 1773
SatI GCNGC 7 cut(s) 378, 505, 981, 1734, 1752, 1764, 2355
Sau3AI GATC 4 cut(s) 1363, 1795, 2015, 2266
Sau96I GGNCC 5 cut(s) 720, 1061, 1109, 1232, 1454
SchI GAGTC 2 cut(s) 857, 1124
ScrFI CCNGG 3 cut(s) 934, 939, 1032
SduI GDGCHC 1 cut(s) 1276
SfaNI GCATC 9 cut(s) 29, 163, 280, 469, 517, 664, 777, 1643, 1750
SfcI CTRYAG 3 cut(s) 390, 1328, 2361
SinI GGWCC 4 cut(s) 720, 1061, 1109, 1232
SmiMI CAYNNNNRTG 4 cut(s) 51, 323, 587, 1266
SmlI CTYRAG 5 cut(s) 296, 809, 1497, 1746, 2285
SmoI CTYRAG 5 cut(s) 296, 809, 1497, 1746, 2285
SpeI ACTAGT 2 cut(s) 250, 260
SphI GCATGC 2 cut(s) 1184, 2095
SseBI AGGCCT 1 cut(s) 1510
SsiI CCGC 3 cut(s) 1091, 1752, 2278
SspI AATATT 4 cut(s) 444, 500, 1669, 1959
SspMI CTAG 9 cut(s) 251, 261, 749, 1323, 1358, 1376, 1433, 1515, 1691
StuI AGGCCT 1 cut(s) 1510
StyD4I CCNGG 3 cut(s) 932, 937, 1030
TaaI ACNGT 6 cut(s) 727, 1882, 2218, 2230, 2347, 2376
TaiI ACGT 4 cut(s) 171, 688, 904, 2430
TaqI TCGA 3 cut(s) 1794, 2064, 2265
TauI GCSGC 1 cut(s) 1754
Tru1I TTAA 7 cut(s) 230, 342, 741, 911, 1311, 1658, 1773
Tru9I TTAA 7 cut(s) 230, 342, 741, 911, 1311, 1658, 1773
TseFI GTSAC 3 cut(s) 280, 2039, 2128
TseI GCWGC 6 cut(s) 377, 504, 980, 1733, 1763, 2354
Tsp45I GTSAC 3 cut(s) 280, 2039, 2128
TspGWI ACGGA 1 cut(s) 2027
VpaK11BI GGWCC 4 cut(s) 720, 1061, 1109, 1232
VspI ATTAAT 2 cut(s) 342, 1311
XagI CCTNNNNNAGG 1 cut(s) 863
XapI RAATTY 5 cut(s) 199, 363, 1139, 1841, 1921
XceI RCATGY 2 cut(s) 1184, 2095
XmiI GTMKAC 1 cut(s) 1566
XmnI GAANNNNTTC 1 cut(s) 443
XspI CTAG 9 cut(s) 251, 261, 749, 1323, 1358, 1376, 1433, 1515, 1691
Zsp2I ATGCAT 2 cut(s) 884, 1636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.