Rroxscaffold_3G00236530

Plant protein of unknown function (DUF639)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0003186
Physical Location & Seq
Forward (+)
23851916 .. 23863186
11271 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00236530.1

Sequence Viewer

Length: 2604 bp
ATGGCAAACATCATCTTTGTCGTTTTGGGTTTGCTTCAAGGAATGATAAGCCTCGGTTCAGGATTGTGGGGCAATCTTTTGGGGACAGGTGGAAGCTCAACGACGTTGATGCCACAGATTGGGCAACCATTTTTGGTGGATCTGTTGAGTGTCTGTGGTCAGTTAACTACACCTTTCATTTCATGCATTAGAAGAAAACTTGATGCATTCCTAGTTCCTTTATGGATGGAATTTAAAGTGGTTCTCTTTTGTGCTTTTAGCACCACATTGAGCAAGTCTCTTAGGGGTCATGATTTCAGTAATTGGAATGATGTGGTGCAAGAAAAGTTGAACTCATGGCTACTGAAGACCCAAAGCTTTTTAAGTGAAGTTACTTCTCCTCTAGTAAGAACTAGTCAGACTGGAAAACCTGTCACCAGAGATGCTCTTGAAACACAAGATATGGACAACATATTTATGGCTGAACAGACTATTAATAGCAGAACACCAAATGGAATTCTCTCTTTGGCTGCTATTGTATCTGTAGAGCAGTTTAGCAGGATGAATGGATTGACGGGGCAGAAAATGCAGAAAATATTCAAAGCGCTTGTTCCTGAATCTACATATAATGATGCTTGTAATTTGGTTGAATATTGCTGCTTTAGGTTTTTGTCAAGGGATGCTTCTGATATTCATCCTTCCCTGAAGGAACCTGCATTCCAAAGACTGATATTCATAACAATGCTTGCATGGGAGAATCCTTATCAAGAACATCTTGCCAGTGGTTCGGAGAAAGCTTCTTTTCAGAGAAAACTTGTGAGAGAAGAGGCCTTTGTACGTTTGGCTCCTGCAATTTCTGGTGTGGCTGATAGGTCCACAGTGCATAATCTATTTAAGGCTCTAGCTGGTGATGAACAAGGCATCTCTTTGAGCTTGTGGTTGACTTATGTTGATGAACTTCTCAAGGTTCACGAAGGAAGAAAATCATATCAGATACGAGAGTCCCAGAACCTTTCTGAGGAAAGAATCTTATGCATTGGTTCCAGCAGGAAACGTCCTGTCCTAAAATGGGAGAAAAATATGGCCTGGCCTGGAAAAGTTACTCTAACTGATAAAGCCATTTATTTTGAGGCAGCTGGGTTATTTGGACAGAATGATTCTATGAAGTTGGATTTGACAAGACCTGGATTGCGAGTGGAAAAAGCAAAAGTTGGACCTTTTGGTTCTGTTCTCTTTGATTCTGCGGTCTCTATATCATATGGTCCCGAGTCAAAAGACACGTGGGTGCTGGAATTCGTTGACTTGGGTGGAGATATGAGGCGAGATGTCTGGCATGCGTTTATTAGTGAGATTATTGTGTTACACAAGTTTATCAGGGAGTATGGTCCAAAGGAAGATGATAAATCGTTATTTCATGTTTATGGTGCTCACAAAGGAAAGGAAAGAGCTATCACCAGTGCCATTAATAGTATAGCTAGACTACAGGCTCTTCAGTTTATGAGGAAGTTGCTAGATGATCCGACCAAACTAGTTCAGTTCACATATCTACAATATGCACCATATGGTGATATTGTTTCTCAGGCTCTAGCAGTAAACTATTGGGGTGGACCACTGATATCTAAGTTTATAGAGGAACACAACCCACCAACTCAAGGAGCAAGGCCTTCTAGCGAAATGATTGAAAGCAGTAATCATGTGTTTGACATTGATGGCAGTGTCTACTTACACAAGTGGAAGACCTCTCCATCTTGGGCTTCAAGTGCTTCTGTGAGCTTTTGGAAGAATGCATCAATAAGGCAGGGGGTGGTATTAAGTAAAAATATTGTTGTTGCTGATTCAGCTCTAGTGGAAAGAGCCACAGGAACATGCAAACAAAAATCACAGGCAGCTGAAAAAACTCAAGCCACTATTGATGCTGCAATGCTTAAAGGGATACCCAGTAACATCGATCTATTCAAGGAACTTCTGCTTCCTCTGACCATAATTGCCACAAAATTTGAAAAACTTAGGCACTGGGAGGAGCCATACTTGACTGTTTCTTTTCTTGCATTTTCCTATACAATCATTTTCAGGAATTTGCTGTCATATATATTCCCAACAGCATTGATAATATTGGCAACTGGTATGCTAACACTGAAGGGGCTAAAGGAGCAAGGCCGTCTTGGGAGATCATTTGGAATGATTACTCTCCGTGACCAGCCTCCTTCAAATACTATTGAAAAAATTATAGCTGTAAAAGATGGCATGCAAGATGTGGAAAATTATTTGCAGAATCTGAATGTCACACTTCTGAAAATACATACAATTATCCTTTCTGGTCAGCCTCAGATTACGACTGAGGTTGCACTGGTGCTGTTATCTTCTGCAACAGTTCTCCTCATTGTGCCATTCAAATATGTCCTTGCCTTTCTTATCTTCGATCTCTTCACGCGGGAGCTTGAGTTCAGGAGGGAGATGGTCAAAAGATTCATAGATTTCTTGAAGGAGCGTTGGGACACAGTGCCTGCTGCCCCTGTAGTTGTATTACCGTATGGAAGTAATGAGTCCACACCAGAACCTGATAGAAAGGGAAACAAGGACGTAGAAAAATCTGAACAAAGTGATAGAAGCAATAATTCTGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF639

Protein Analysis

867

Amino Acids

97.27

Weight (kDa)

8.49

Isoelectric Point (pI)

39.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF639 PF04842 607 - 836 9.4e-88 Plant protein of unknown function (DUF639)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 700
AccB7I CCANNNNNTGG 1 cut(s) 119
AccI GTMKAC 1 cut(s) 1698
AccII CGCG 1 cut(s) 2410
AciI CCGC 2 cut(s) 1223, 2410
AclWI GGATC 2 cut(s) 147, 1490
AcsI RAATTY 5 cut(s) 230, 495, 1271, 1973, 2053
AcuI CTGAAG 4 cut(s) 365, 704, 1454, 2135
AcvI CACGTG 1 cut(s) 1260
AfaI GTAC 1 cut(s) 816
AfeI AGCGCT 1 cut(s) 585
AfiI CCNNNNNNNGG 4 cut(s) 119, 997, 1048, 1631
AflIII ACRYGT 1 cut(s) 1257
AhlI ACTAGT 2 cut(s) 392, 1507
AjnI CCWGG 3 cut(s) 1064, 1069, 1162
AleI CACNNNNGTG 1 cut(s) 1262
AloI GAACNNNNNNTCC 4 cut(s) 681, 713, 2405, 2437
Alw21I GWGCWC 1 cut(s) 1408
Alw26I GTCTC 2 cut(s) 282, 1231
AlwI GGATC 2 cut(s) 147, 1490
AlwNI CAGNNNCTG 3 cut(s) 2254, 2483, 2537
Ama87I CYCGRG 1 cut(s) 1244
Aor51HI AGCGCT 1 cut(s) 585
AoxI GGCC 5 cut(s) 807, 1062, 1067, 1640, 2134
ApeKI GCWGC 6 cut(s) 509, 636, 1112, 1865, 1895, 2486
ApoI RAATTY 5 cut(s) 230, 495, 1271, 1973, 2053
AseI ATTAAT 2 cut(s) 474, 1443
Asp700I GAANNNNTTC 1 cut(s) 575
AspLEI GCGC 1 cut(s) 586
AspS9I GGNCC 5 cut(s) 852, 1193, 1241, 1364, 1586
AsuHPI GGTGA 4 cut(s) 406, 899, 1423, 1556
AvaI CYCGRG 1 cut(s) 1244
AvaII GGWCC 5 cut(s) 852, 1193, 1241, 1364, 1586
BaeI ACNNNNGTAYC 2 cut(s) 965, 998
BbrPI CACGTG 1 cut(s) 1260
BbsI GAAGAC 2 cut(s) 353, 1721
Bbv12I GWGCWC 1 cut(s) 1408
BbvI GCAGC 6 cut(s) 496, 623, 1124, 1877, 1882, 2473
BccI CCATC 5 cut(s) 220, 1682, 1732, 2213, 2428
BceAI ACGGC 1 cut(s) 2121
BcgI CGANNNNNNTGC 2 cut(s) 91, 125
BciT130I CCWGG 3 cut(s) 1066, 1071, 1164
BciVI GTATCC 1 cut(s) 1905
BcoDI GTCTC 2 cut(s) 282, 1231
BcuI ACTAGT 2 cut(s) 392, 1507
BfmI CTRYAG 3 cut(s) 522, 1460, 2493
BfoI RGCGCY 1 cut(s) 587
BfuAI ACCTGC 1 cut(s) 700
BfuI GTATCC 1 cut(s) 1905
BisI GCNGC 6 cut(s) 510, 637, 1113, 1866, 1896, 2487
BlsI GCNGC 6 cut(s) 511, 638, 1114, 1867, 1897, 2488
Bme1390I CCNGG 3 cut(s) 1066, 1071, 1164
Bme18I GGWCC 5 cut(s) 852, 1193, 1241, 1364, 1586
BmeT110I CYCGRG 1 cut(s) 1244
BmgT120I GGNCC 5 cut(s) 852, 1193, 1241, 1364, 1586
BmiI GGNNCC 5 cut(s) 690, 825, 1021, 1243, 2001
BmrFI CCNGG 3 cut(s) 1066, 1071, 1164
BmrI ACTGGG 2 cut(s) 1911, 2002
BmsI GCATC 8 cut(s) 99, 193, 412, 601, 649, 909, 1775, 1882
BmuI ACTGGG 2 cut(s) 1911, 2002
BpiI GAAGAC 2 cut(s) 353, 1721
BplI GAGNNNNNCTC 2 cut(s) 262, 294
BpuEI CTTGAG 4 cut(s) 926, 1614, 1863, 2438
Bsa29I ATCGAT 1 cut(s) 1926
BsaAI YACGTR 1 cut(s) 1260
BsaBI GATNNNNATC 1 cut(s) 672
BsaI GGTCTC 1 cut(s) 1231
BsaJI CCNNGG 1 cut(s) 52
BsaXI ACNNNNNCTCC 2 cut(s) 2405, 2435
Bsc4I CCNNNNNNNGG 4 cut(s) 119, 997, 1048, 1631
Bse1I ACTGG 7 cut(s) 406, 759, 1434, 1917, 1997, 2104, 2331
Bse3DI GCAATG 1 cut(s) 1905
Bse8I GATNNNNATC 1 cut(s) 672
BseBI CCWGG 3 cut(s) 1066, 1071, 1164
BseCI ATCGAT 1 cut(s) 1926
BseDI CCNNGG 1 cut(s) 52
BseGI GGATG 4 cut(s) 231, 546, 664, 673
BseJI GATNNNNATC 1 cut(s) 672
BseLI CCNNNNNNNGG 4 cut(s) 119, 997, 1048, 1631
BseMI GCAATG 1 cut(s) 1905
BseMII CTCAG 4 cut(s) 987, 1571, 2307, 2318
BseNI ACTGG 7 cut(s) 406, 759, 1434, 1917, 1997, 2104, 2331
BseRI GAGGAG 3 cut(s) 369, 2012, 2345
BseXI GCAGC 6 cut(s) 496, 623, 1124, 1877, 1882, 2473
BseYI CCCAGC 1 cut(s) 1115
Bsh1236I CGCG 1 cut(s) 2410
BshFI GGCC 5 cut(s) 809, 1064, 1069, 1642, 2136
BshVI ATCGAT 1 cut(s) 1926
BsiHKAI GWGCWC 1 cut(s) 1408
BsiHKCI CYCGRG 1 cut(s) 1244
BslFI GGGAC 4 cut(s) 97, 967, 1227, 2486
BslI CCNNNNNNNGG 4 cut(s) 119, 997, 1048, 1631
BsmAI GTCTC 2 cut(s) 282, 1231
BsmFI GGGAC 4 cut(s) 97, 967, 1227, 2486
BsmI GAATGC 3 cut(s) 206, 695, 1768
BsnI GGCC 5 cut(s) 809, 1064, 1069, 1642, 2136
Bso31I GGTCTC 1 cut(s) 1231
BsoBI CYCGRG 1 cut(s) 1244
Bsp1286I GDGCHC 1 cut(s) 1408
Bsp143I GATC 5 cut(s) 139, 1495, 1927, 2147, 2398
BspACI CCGC 2 cut(s) 1223, 2410
BspANI GGCC 5 cut(s) 809, 1064, 1069, 1642, 2136
BspCNI CTCAG 4 cut(s) 988, 1570, 2308, 2317
BspDI ATCGAT 1 cut(s) 1926
BspFNI CGCG 1 cut(s) 2410
BspHI TCATGA 1 cut(s) 289
BspLI GGNNCC 5 cut(s) 690, 825, 1021, 1243, 2001
BspMI ACCTGC 1 cut(s) 700
BspPI GGATC 2 cut(s) 147, 1490
BspQI GCTCTTC 1 cut(s) 1473
BspTNI GGTCTC 1 cut(s) 1231
BsrDI GCAATG 1 cut(s) 1905
BsrI ACTGG 7 cut(s) 406, 759, 1434, 1917, 1997, 2104, 2331
BssECI CCNNGG 1 cut(s) 52
BssMI GATC 5 cut(s) 139, 1495, 1927, 2147, 2398
Bst2UI CCWGG 3 cut(s) 1066, 1071, 1164
Bst4CI ACNGT 5 cut(s) 859, 2014, 2350, 2479, 2508
Bst6I CTCTTC 3 cut(s) 798, 1473, 2408
BstAPI GCANNNNNTGC 1 cut(s) 565
BstBAI YACGTR 1 cut(s) 1260
BstC8I GCNNGC 4 cut(s) 726, 1314, 2225, 2484
BstDEI CTNAG 7 cut(s) 281, 996, 1557, 1599, 1985, 2304, 2316
BstENI CCTNNNNNAGG 1 cut(s) 995
BstF5I GGATG 4 cut(s) 231, 546, 664, 673
BstFNI CGCG 1 cut(s) 2410
BstH2I RGCGCY 1 cut(s) 587
BstHHI GCGC 1 cut(s) 586
BstKTI GATC 5 cut(s) 142, 1498, 1930, 2150, 2401
BstMAI GTCTC 2 cut(s) 282, 1231
BstMBI GATC 5 cut(s) 139, 1495, 1927, 2147, 2398
BstMWI GCNNNNNNNGC 4 cut(s) 565, 1739, 1817, 2128
BstNI CCWGG 3 cut(s) 1066, 1071, 1164
BstNSI RCATGY 3 cut(s) 1316, 1848, 2227
BstSCI CCNGG 3 cut(s) 1064, 1069, 1162
BstSFI CTRYAG 3 cut(s) 522, 1460, 2493
BstUI CGCG 1 cut(s) 2410
BstV1I GCAGC 6 cut(s) 496, 623, 1124, 1877, 1882, 2473
BstV2I GAAGAC 2 cut(s) 353, 1721
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
Bsu15I ATCGAT 1 cut(s) 1926
BsuI GTATCC 1 cut(s) 1905
BsuRI GGCC 5 cut(s) 809, 1064, 1069, 1642, 2136
BsuTUI ATCGAT 1 cut(s) 1926
BtsCI GGATG 4 cut(s) 231, 546, 664, 673
BtsI GCAGTG 1 cut(s) 1699
BtsIMutI CAGTG 9 cut(s) 766, 864, 1441, 1589, 1699, 1990, 2111, 2324, 2484
BveI ACCTGC 1 cut(s) 700
Cac8I GCNNGC 4 cut(s) 726, 1314, 2225, 2484
CaiI CAGNNNCTG 3 cut(s) 2254, 2483, 2537
CciI TCATGA 1 cut(s) 289
CfoI GCGC 1 cut(s) 586
Cfr13I GGNCC 5 cut(s) 852, 1193, 1241, 1364, 1586
ClaI ATCGAT 1 cut(s) 1926
Csp6I GTAC 1 cut(s) 815
CspCI CAANNNNNGTGG 2 cut(s) 1957, 1992
CviAII CATG 9 cut(s) 183, 290, 336, 729, 1313, 1394, 1673, 1845, 2224
CviQI GTAC 1 cut(s) 815
DdeI CTNAG 7 cut(s) 281, 996, 1557, 1599, 1985, 2304, 2316
DpnI GATC 5 cut(s) 141, 1497, 1929, 2149, 2400
DpnII GATC 5 cut(s) 139, 1495, 1927, 2147, 2398
DraI TTTAAA 1 cut(s) 235
Eam1104I CTCTTC 3 cut(s) 798, 1473, 2408
EarI CTCTTC 3 cut(s) 798, 1473, 2408
Eco147I AGGCCT 2 cut(s) 809, 1642
Eco31I GGTCTC 1 cut(s) 1231
Eco32I GATATC 1 cut(s) 1596
Eco47I GGWCC 5 cut(s) 852, 1193, 1241, 1364, 1586
Eco47III AGCGCT 1 cut(s) 585
Eco57I CTGAAG 4 cut(s) 365, 704, 1454, 2135
Eco72I CACGTG 1 cut(s) 1260
Eco88I CYCGRG 1 cut(s) 1244
EcoNI CCTNNNNNAGG 1 cut(s) 995
EcoRI GAATTC 2 cut(s) 495, 1271
EcoRII CCWGG 3 cut(s) 1064, 1069, 1162
EcoRV GATATC 1 cut(s) 1596
EcoT22I ATGCAT 4 cut(s) 188, 208, 1016, 1768
FaeI CATG 9 cut(s) 186, 293, 339, 732, 1316, 1397, 1676, 1848, 2227
FalI AAGNNNNNCTT 6 cut(s) 646, 678, 738, 770, 2124, 2156
FaqI GGGAC 4 cut(s) 97, 967, 1227, 2486
FatI CATG 9 cut(s) 182, 289, 335, 728, 1312, 1393, 1672, 1844, 2223
FauI CCCGC 1 cut(s) 2403
FauNDI CATATG 2 cut(s) 1237, 1540
FblI GTMKAC 1 cut(s) 1698
Fnu4HI GCNGC 6 cut(s) 510, 637, 1113, 1866, 1896, 2487
FokI GGATG 4 cut(s) 238, 553, 660, 671
Fsp4HI GCNGC 6 cut(s) 510, 637, 1113, 1866, 1896, 2487
GlaI GCGC 1 cut(s) 585
GluI GCNGC 6 cut(s) 510, 637, 1113, 1866, 1896, 2487
GsaI CCCAGC 1 cut(s) 1119
HaeII RGCGCY 1 cut(s) 587
HaeIII GGCC 5 cut(s) 809, 1064, 1069, 1642, 2136
HhaI GCGC 1 cut(s) 586
Hin1II CATG 9 cut(s) 186, 293, 339, 732, 1316, 1397, 1676, 1848, 2227
Hin6I GCGC 1 cut(s) 584
HinP1I GCGC 1 cut(s) 584
HincII GTYRAC 3 cut(s) 165, 921, 1279
HindII GTYRAC 3 cut(s) 165, 921, 1279
HindIII AAGCTT 2 cut(s) 355, 774
HpaI GTTAAC 1 cut(s) 165
HphI GGTGA 4 cut(s) 406, 899, 1423, 1556
Hpy99I CGWCG 1 cut(s) 106
HpyAV CCTTC 7 cut(s) 679, 687, 947, 1653, 2110, 2193, 2455
HpyCH4III ACNGT 5 cut(s) 859, 2014, 2350, 2479, 2508
HpyCH4IV ACGT 5 cut(s) 104, 817, 1033, 1259, 2559
HpyF10VI GCNNNNNNNGC 4 cut(s) 565, 1739, 1817, 2128
HpyF3I CTNAG 7 cut(s) 281, 996, 1557, 1599, 1985, 2304, 2316
HpySE526I ACGT 5 cut(s) 104, 817, 1033, 1259, 2559
Hsp92II CATG 9 cut(s) 186, 293, 339, 732, 1316, 1397, 1676, 1848, 2227
HspAI GCGC 1 cut(s) 584
KspAI GTTAAC 1 cut(s) 165
Kzo9I GATC 5 cut(s) 139, 1495, 1927, 2147, 2398
LguI GCTCTTC 1 cut(s) 1473
LmnI GCTCC 6 cut(s) 829, 1634, 1999, 2128, 2413, 2464
Lsp1109I GCAGC 6 cut(s) 496, 623, 1124, 1877, 1882, 2473
LweI GCATC 8 cut(s) 99, 193, 412, 601, 649, 909, 1775, 1882
MaeII ACGT 5 cut(s) 104, 817, 1033, 1259, 2559
MaeIII GTNAC 7 cut(s) 370, 412, 1078, 1338, 1919, 2171, 2260
MalI GATC 5 cut(s) 141, 1497, 1929, 2149, 2400
MboI GATC 5 cut(s) 139, 1495, 1927, 2147, 2398
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 1 cut(s) 1408
MlyI GAGTC 3 cut(s) 989, 1256, 2531
MmeI TCCRAC 3 cut(s) 1128, 1171, 1523
Mph1103I ATGCAT 4 cut(s) 188, 208, 1016, 1768
MroXI GAANNNNTTC 1 cut(s) 575
MseI TTAA 8 cut(s) 164, 234, 362, 474, 873, 1443, 1790, 1905
MslI CAYNNNNRTG 4 cut(s) 455, 719, 1262, 1398
MspA1I CMGCKG 2 cut(s) 1115, 1868
MspR9I CCNGG 3 cut(s) 1066, 1071, 1164
Mva1269I GAATGC 3 cut(s) 206, 695, 1768
MvaI CCWGG 3 cut(s) 1066, 1071, 1164
MvnI CGCG 1 cut(s) 2410
MwoI GCNNNNNNNGC 4 cut(s) 565, 1739, 1817, 2128
NdeI CATATG 2 cut(s) 1237, 1540
NdeII GATC 5 cut(s) 139, 1495, 1927, 2147, 2398
NlaIII CATG 9 cut(s) 186, 293, 339, 732, 1316, 1397, 1676, 1848, 2227
NlaIV GGNNCC 5 cut(s) 690, 825, 1021, 1243, 2001
NmuCI GTSAC 3 cut(s) 412, 2171, 2260
NsiI ATGCAT 4 cut(s) 188, 208, 1016, 1768
NspI RCATGY 3 cut(s) 1316, 1848, 2227
OliI CACNNNNGTG 1 cut(s) 1262
PaeI GCATGC 2 cut(s) 1316, 2227
PagI TCATGA 1 cut(s) 289
PceI AGGCCT 2 cut(s) 809, 1642
PciSI GCTCTTC 1 cut(s) 1473
PctI GAATGC 3 cut(s) 206, 695, 1768
PdmI GAANNNNTTC 1 cut(s) 575
PfeI GAWTC 8 cut(s) 596, 736, 1005, 1136, 1217, 1814, 2251, 2445
PflMI CCANNNNNTGG 1 cut(s) 119
PkrI GCNGC 6 cut(s) 511, 638, 1114, 1867, 1897, 2488
PleI GAGTC 3 cut(s) 988, 1255, 2530
PmaCI CACGTG 1 cut(s) 1260
PmlI CACGTG 1 cut(s) 1260
PpsI GAGTC 3 cut(s) 988, 1255, 2530
Ppu21I YACGTR 1 cut(s) 1260
PshBI ATTAAT 2 cut(s) 474, 1443
Psp6I CCWGG 3 cut(s) 1064, 1069, 1162
PspCI CACGTG 1 cut(s) 1260
PspFI CCCAGC 1 cut(s) 1115
PspGI CCWGG 3 cut(s) 1064, 1069, 1162
PspN4I GGNNCC 5 cut(s) 690, 825, 1021, 1243, 2001
PspPI GGNCC 5 cut(s) 852, 1193, 1241, 1364, 1586
PstNI CAGNNNCTG 3 cut(s) 2254, 2483, 2537
PsuI RGATCY 1 cut(s) 139
PvuII CAGCTG 2 cut(s) 1115, 1868
RsaI GTAC 1 cut(s) 816
RsaNI GTAC 1 cut(s) 815
RseI CAYNNNNRTG 4 cut(s) 455, 719, 1262, 1398
SapI GCTCTTC 1 cut(s) 1473
SaqAI TTAA 8 cut(s) 164, 234, 362, 474, 873, 1443, 1790, 1905
SatI GCNGC 6 cut(s) 510, 637, 1113, 1866, 1896, 2487
Sau3AI GATC 5 cut(s) 139, 1495, 1927, 2147, 2398
Sau96I GGNCC 5 cut(s) 852, 1193, 1241, 1364, 1586
SchI GAGTC 3 cut(s) 989, 1256, 2531
ScrFI CCNGG 3 cut(s) 1066, 1071, 1164
SduI GDGCHC 1 cut(s) 1408
SfaNI GCATC 8 cut(s) 99, 193, 412, 601, 649, 909, 1775, 1882
SfcI CTRYAG 3 cut(s) 522, 1460, 2493
SinI GGWCC 5 cut(s) 852, 1193, 1241, 1364, 1586
SmiMI CAYNNNNRTG 4 cut(s) 455, 719, 1262, 1398
SmlI CTYRAG 4 cut(s) 941, 1629, 1878, 2417
SmoI CTYRAG 4 cut(s) 941, 1629, 1878, 2417
SpeI ACTAGT 2 cut(s) 392, 1507
SphI GCATGC 2 cut(s) 1316, 2227
SseBI AGGCCT 2 cut(s) 809, 1642
SsiI CCGC 2 cut(s) 1223, 2410
SspI AATATT 4 cut(s) 576, 632, 1801, 2091
StuI AGGCCT 2 cut(s) 809, 1642
StyD4I CCNGG 3 cut(s) 1064, 1069, 1162
TaaI ACNGT 5 cut(s) 859, 2014, 2350, 2479, 2508
TaiI ACGT 5 cut(s) 107, 820, 1036, 1262, 2562
TaqI TCGA 2 cut(s) 1926, 2397
TfiI GAWTC 8 cut(s) 596, 736, 1005, 1136, 1217, 1814, 2251, 2445
Tru1I TTAA 8 cut(s) 164, 234, 362, 474, 873, 1443, 1790, 1905
Tru9I TTAA 8 cut(s) 164, 234, 362, 474, 873, 1443, 1790, 1905
TscAI CASTG 9 cut(s) 766, 864, 1441, 1596, 1699, 1997, 2118, 2331, 2484
TseFI GTSAC 3 cut(s) 412, 2171, 2260
TseI GCWGC 6 cut(s) 509, 636, 1112, 1865, 1895, 2486
Tsp45I GTSAC 3 cut(s) 412, 2171, 2260
TspGWI ACGGA 1 cut(s) 2159
TspRI CASTG 9 cut(s) 766, 864, 1441, 1596, 1699, 1997, 2118, 2331, 2484
Van91I CCANNNNNTGG 1 cut(s) 119
VpaK11BI GGWCC 5 cut(s) 852, 1193, 1241, 1364, 1586
VspI ATTAAT 2 cut(s) 474, 1443
XagI CCTNNNNNAGG 1 cut(s) 995
XapI RAATTY 5 cut(s) 230, 495, 1271, 1973, 2053
XceI RCATGY 3 cut(s) 1316, 1848, 2227
XmiI GTMKAC 1 cut(s) 1698
XmnI GAANNNNTTC 1 cut(s) 575
Zsp2I ATGCAT 4 cut(s) 188, 208, 1016, 1768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.